Name: Pedobacter soli 15-51
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131129

Type strain:

Species: Pedobacter soli

Strain Designation: 15-51

Variant: Isotype of BacDive ID 14102

Culture col. no.: DSM 25729, KACC 14939, NBRC 107691

Strain history: <- KACC

NCBI tax ID(s): 390242 (species)

SI-ID 400046

DSM 25729, DSM 18609

Special Collections

DSMZ

Other strains from Pedobacter soli

Section

Pedobacter soli 15-51 is a bacterium that was isolated from rhizosphere soil of Chinese cabbage .

Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Pedobacter*
	Species	**Pedobacter soli**
	Full Scientific Name (LPSN)	Pedobacter soli Kwon et al. 2011

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22421]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #22421]

Culture medium growth

[Ref.: #22421]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22421]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22421]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22421]	Sample type/isolated from	rhizosphere soil of Chinese cabbage (Brassica campestris)
[Ref.: #22421]	Host species	Brassica campestris
[Ref.: #22421]	Geographic location (country and/or sea, region)	Suwon (37° 16' 38.50'' N 126° 58' 59.60'' E)
[Ref.: #22421]	Country	Republic of Korea
[Ref.: #22421]	Country ISO 3 Code	KOR
[Ref.: #22421]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22421]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

[Ref.: #22421]

GC-content

38.6 mol%

Availability in culture collections External links

[Ref.: #22421]

Culture collection no.

DSM 25729, KACC 14939, NBRC 107691

[Ref.: #89583]

SI-ID 400046

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pedobacter riviphilus sp. nov., isolated from stream sediment.	Im HS, Joung Y, Lee SS	Int J Syst Evol Microbiol	10.1099/ijsem.0.004989	2021	*
Phylogeny	Pedobacter miscanthi sp. nov., isolated from Miscanthus sinensis.	Chen Z, Tian W, Sun F, Chen Y, Han H, Yao L, Zhang Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.003161	2019	*
Phylogeny	Pedobacter vanadiisoli sp. nov., isolated from soil of a vanadium mine.	Wang Z, Tan Y, Xu D, Wang G, Yuan J, Zheng S	Int J Syst Evol Microbiol	10.1099/ijsem.0.001480	2016	*
Phylogeny	Pedobacter kyungheensis sp. nov., with ginsenoside converting activity.	Yang JE, Shin JY, Park SY, T Mavlonov G, Yi EJ, Lee EH, Lee JM, Yi TH	J Gen Appl Microbiol	10.2323/jgam.58.309	2012	*
Phylogeny	Pedobacter rhizosphaerae sp. nov. and Pedobacter soli sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris).	Kwon SW, Son JA, Kim SJ, Kim YS, Park IC, Bok JI, Weon HY	Int J Syst Evol Microbiol	10.1099/ijs.0.026781-0	2011	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22421

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25729

#89583

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400046.1 )

* These data were automatically processed and therefore are not curated

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