Name: Anaerofustis stercorihominis WHC-424-CC-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131107

Type strain:

Species: Anaerofustis stercorihominis

Strain Designation: WHC-424-CC-1

Culture col. no.: DSM 28733

Strain history: <- T. Clavel, TU Munich, Freising-Weihenstephan, Germany; WHC-424-CC-1

NCBI tax ID(s): 214853 (species)

SI-ID 400000

DSM 28733

Special Collections

Other strains from Anaerofustis stercorihominis

Section

Anaerofustis stercorihominis WHC-424-CC-1 is an anaerobe bacterium that was isolated from caecal content; TNF^deltaARE/+ C57BL/6 mouse.

anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Eubacteriaceae*
	Genus	*Anaerofustis*
	Species	**Anaerofustis stercorihominis**
	Full Scientific Name (LPSN)	Anaerofustis stercorihominis Finegold et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #22399]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22399]

Culture medium

FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203)

[Ref.: #22399]

Culture medium growth

[Ref.: #22399]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22399]

Culture medium composition

expand / minimize

[Ref.: #22399]

Culture medium

BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)

[Ref.: #22399]

Culture medium growth

[Ref.: #22399]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22399]

Culture medium composition

expand / minimize

[Ref.: #22399]

Culture medium

WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)

[Ref.: #22399]

Culture medium growth

[Ref.: #22399]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22399]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22399]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #22399]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22399]	Sample type/isolated from	caecal content; TNF^deltaARE/+ C57BL/6 mouse
[Ref.: #22399]	Geographic location (country and/or sea, region)	Freising
[Ref.: #22399]	Country	Germany
[Ref.: #22399]	Country ISO 3 Code	DEU
[Ref.: #22399]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	#Large intestine
#Host Body Product	#Gastrointestinal tract	#Caecal content

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KR364732 (>99% sequence identity) for Anaerofustis stercorihominis subclade from Microbeatlas

Aquatic Samples	375
Soil Samples	177
Animal Samples	19796
Plant Samples	85
Total Samples	20433

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22399]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22399]	Anaerofustis stercorihominis strain WHC-424-CC-1 16S ribosomal RNA gene, partial sequence	KR364732	1432	GenBank ENA	214853 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anaerofustis stercorihominis DSM 28733	GCA_024623185	contig	GenBank ENA	214853 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerofustis stercorihominis DSM 28733 NCBI: GCA_024623185.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	78.318	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	87.882	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.988	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	62.666	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	86.543	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	85.026	no

Availability in culture collections External links

[Ref.: #22399]

Culture collection no.

DSM 28733

[Ref.: #89566]

SI-ID 400000

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22399

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28733

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89566

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400000.1 )

* These data were automatically processed and therefore are not curated

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Anaerofustis stercorihominis DSM 28733

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