Zymomonas mobilis (DSM 14017, PROIMI A1)

Name: Zymomonas mobilis (DSM 14017, PROIMI A1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131031

Type strain

Culture col. no. DSM 14017 PROIMI A1

NCBI tax ID(s) 542

Special Collections DSMZ

History <- O. D. Delgado, PROIMI, Tucuman, Argentina; Proimi A1 <- E. Rodriguez

Links

Zymomonas mobilis DSM 14017 is a microaerophile, mesophilic prokaryote that was isolated from sugar cane juice.

microaerophile mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 399211

DSM 14017

@ref 20215

Last LPSN update 2026-02-09 11:31:22

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Zymomonadaceae

Genus Zymomonas

Species Zymomonas mobilis

Full scientific name Zymomonas mobilis corrig. (Lindner 1928) Kluyver and van Niel 1936 (Approved Lists 1980)

Synonyms (2)

Zymomonas mobile
"Thermobacterium mobile"

BacDive ID	Other strains from **Zymomonas mobilis** (7)	Type strain
14289	Z. mobilis pZM01 to pZM06, DSM 424, ATCC 10988, NCIB ... (type strain)
14288	Z. mobilis DSM 473, ATCC 29501, NCIB 8227, CIP 102539, ...
100099	Z. mobilis STI09675(IMET), IFO 14523, INA 2240, IMET ...
132834	Z. mobilis UVS 51, DSM 12494
132835	Z. mobilis CU 1, DSM 12495
132836	Z. mobilis DSM 12496, CCUG 17860, CIP 102538, JCM 20722, ...
132837	Z. mobilis CU 1 Rif 2, DSM 12497

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.548
125439	negative	99

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22323	ZYMOMONAS MEDIUM (DSMZ Medium 10)		Medium recipe at MediaDive	Name: ZYMOMONAS MEDIUM (DSMZ Medium 10) Composition: Glucose 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Bacto peptone 10.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
22323	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
22323	microaerophile
125439	obligate aerobe	95.7

Spore formation

@ref	Spore formation	Confidence
125438		92.341
125439		99

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body Product	#Plant	#Juice (natural)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22323	sugar cane juice	Tucumàn	Argentina	ARG	Middle and South America

Taxonmaps

69479

Global distribution of 16S sequence AF281033 (>99% sequence identity) for Zymomonas mobilis subclade from Microbeatlas

Aquatic Samples	916
Soil Samples	1083
Animal Samples	421
Plant Samples	161
Total Samples	2581

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22323	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score	IMG accession
66792	Zymomonas mobilis mobilis DSM 14017	complete			542	99.02	2811994956
66792	ASM671596v1 assembly for Zymomonas mobilis	contig	GCA_006715965	542.20	542	3.44

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22323	Zymomonas mobilis 16S ribosomal RNA gene, partial sequence	AF281033	1452		542
124043	Zymomonas mobilis strain PROIMI A1 16S-23S internal transcribed spacer, complete sequence.	AF329203	231		542

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Zymomonas mobilis strain DSM 14017
PATRIC: 542.20

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.00	no
125439	motility	BacteriaNetⓘ	yes	62.70	no
125439	gram_stain	BacteriaNetⓘ	negative	99.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Zymomonas mobilis strain DSM 14017
PATRIC: 542.20

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.55	no
125438	anaerobic	anaerobicⓘ	no	60.90	no
125438	spore-forming	spore-formingⓘ	no	92.34	no
125438	aerobic	aerobicⓘ	no	74.02	yes
125438	thermophilic	thermophileⓘ	no	93.00	no
125438	flagellated	motile2+ⓘ	yes	59.46	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Zymomonas diversity and potential for biofuel production.	Felczak MM, Bowers RM, Woyke T, TerAvest MA.	Biotechnol Biofuels	10.1186/s13068-021-01958-2	2021
Enzymology	Construction of an integrative shuttle vector for Zymomonas mobilis.	Delgado OD, Abate CM, Sineriz F	FEMS Microbiol Lett	10.1111/j.1574-6968.1995.tb07805.x	1995

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22323	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14017
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Zymomonas mobilis (DSM 14017, PROIMI A1)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_006715965

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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