Pseudomonas oleovorans (DSM 28630, 230G)

Name: Pseudomonas oleovorans (DSM 28630, 230G)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131006

Type strain

Strain Designation 230G

Culture col. no. DSM 28630 230G

NCBI tax ID(s) 301

Special Collections DSMZ Mouse DZIF

History DSMZ <- T. Clavel, TU Munich, Freising-Weihenstephan, Germany; 230G

Links

Pseudomonas oleovorans 230G is a bacterium that was isolated from caecal content; wildtype C57BL/6 mouse.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400341

DSM 28630

@ref 20215

Last LPSN update 2026-05-29 08:37:31

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas oleovorans

Full scientific name Pseudomonas oleovorans Lee and Chandler 1941 (Approved Lists 1980)

Synonyms (3)

Ectopseudomonas pseudoalcaligenes
Pseudomonas pseudoalcaligenes
Ectopseudomonas oleovorans

BacDive ID	Other strains from **Pseudomonas oleovorans** (26)	Type strain
12867	P. oleovorans CCUG 2087, IFO 13583, DSM 1045, ATCC 8062, ... (type strain)
12868	P. oleovorans 3822, DSM 7521, ATCC 49536, CCUG 299
12869	P. oleovorans X-59, X 59, 63, DSM 50188, ATCC 17440, ICPB ...
135573	P. oleovorans CIP 55.111, ATCC 17663
137307	P. oleovorans TF4-1L, CIP 105816, ATCC 29347
137445	P. oleovorans CIP 60.76, ATCC 17443
138736	P. oleovorans CIP 102546
139243	P. oleovorans CIP 104355, ATCC 13474
142846	P. oleovorans CCUG 15279
142847	P. oleovorans CCUG 15284
142848	P. oleovorans CCUG 15286
143397	P. oleovorans CCUG 18891
152960	P. oleovorans CCUG 48136
154632	P. oleovorans CCUG 54654
156377	P. oleovorans CCUG 61386
157438	P. oleovorans IMI 349020
161427	P. oleovorans JCM 13973
161428	P. oleovorans JCM 13974
161429	P. oleovorans JCM 13975
161430	P. oleovorans JCM 13976
161431	P. oleovorans JCM 13978
161432	P. oleovorans JCM 13979
161433	P. oleovorans JCM 13980
161434	P. oleovorans JCM 13981
161435	P. oleovorans JCM 13983
162959	P. oleovorans JCM 20560, ATCC 12815, IAM 12410, ICPB 4343, ...

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	98.44
125439		90.085
125438	negative	99.5

Colony morphology

22298

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22298	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22298	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.361
125439	obligate aerobe	95.836

Spore formation

@ref	Spore formation	Confidence
125439		99.904

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
22298	+	-	-	-	-	-	-	-	+	-	-	-	-	+	-	+	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	#Large intestine
#Host Body Product	#Gastrointestinal tract	#Caecal content

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22298	caecal content; wildtype C57BL/6 mouse	Freising	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence KR364786 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	2670
Soil Samples	769
Animal Samples	2451
Plant Samples	1575
Total Samples	7465

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2462196v1 assembly for Ectopseudomonas oleovorans DSM 28630	contig	GCA_024621965	301.43	301	51.31

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22298	Pseudomonas sp. 230G 16S ribosomal RNA gene, partial sequence	KR364786	1437		1796648

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2462196v1 assembly for Ectopseudomonas oleovorans DSM 28630
NCBI: GCA_024621965

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.84	no
125439	motility	BacteriaNetⓘ	yes	90.09	no
125439	gram_stain	BacteriaNetⓘ	negative	98.44	no
125439	spore_formation	BacteriaNetⓘ	no	99.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas oleovorans DSM 28630
NCBI: GCA_024621965.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.50	no
125438	anaerobic	anaerobicⓘ	no	97.34	no
125438	aerobic	aerobicⓘ	yes	90.36	no
125438	spore-forming	spore-formingⓘ	no	89.53	no
125438	thermophilic	thermophileⓘ	no	99.76	yes
125438	flagellated	motile2+ⓘ	yes	89.73	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic Insights into Cyanide Biodegradation in the Pseudomonas Genus.	Saez LP, Rodriguez-Caballero G, Olaya-Abril A, Cabello P, Moreno-Vivian C, Roldan MD, Luque-Almagro VM.	Int J Mol Sci	10.3390/ijms25084456	2024

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22298	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28630
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas oleovorans (DSM 28630, 230G)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_024621965

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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