"Bacteroides neonati" NEC1412b3 is an anaerobe, mesophilic prokaryote that was isolated from human stool.
anaerobe mesophilic 16S sequence| @ref 20215 |
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Last LPSN update
2025-12-16 10:01:07 |
| Domain Pseudomonadati |
| Phylum Bacteroidota |
| Class Bacteroidia |
| Order Bacteroidales |
| Family Bacteroidaceae |
| Genus Bacteroides |
| Species "Bacteroides neonati" |
| Full scientific name Bacteroides neonati Cassir et al. 2014 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 22268 | FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203) | Medium recipe at MediaDive  | Name: FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203) Composition: Horse blood 100.0 g/l Fastidious Anaerobe Agar 45.7 g/l Deionized water | ||
| 22268 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 22268 | positive | growth | 37 | mesophilic |
| 22268 | Oxygen toleranceanaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 68380 | 16634 ChEBI | raffinose | - | fermentation | from API rID32A |
| 68380 | 27897 ChEBI | tryptophan | + | energy source | from API rID32A |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | from API rID32A |
| @ref | Chebi-ID | Metabolite | Indole test | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | + | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68380 | alanine arylamidase | + | 3.4.11.2 | from API rID32A |
| 68380 | alkaline phosphatase | + | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68380 | alpha-fucosidase | + | 3.2.1.51 | from API rID32A |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68380 | alpha-glucosidase | + | 3.2.1.20 | from API rID32A |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68380 | histidine arylamidase | - | from API rID32A | |
| 68380 | L-arginine arylamidase | - | from API rID32A | |
| 68380 | leucine arylamidase | - | 3.4.11.1 | from API rID32A |
| 68380 | leucyl glycin arylamidase | + | 3.4.11.1 | from API rID32A |
| 68380 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API rID32A |
| 68380 | phenylalanine arylamidase | - | from API rID32A | |
| 68380 | proline-arylamidase | - | 3.4.11.5 | from API rID32A |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68380 | serine arylamidase | - | from API rID32A | |
| 68380 | tryptophan deaminase | + | 4.1.99.1 | from API rID32A |
| 68380 | tyrosine arylamidase | - | from API rID32A | |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22268 | - | - | - | + | - | + | - | - | - | + | +/- | - | - | + | - | + | + | - | - | + | - | - | - | - | + | + | - | + | - | |
| 22268 | - | - | - | + | - | + | - | - | - | + | + | - | + | + | - | + | + | - | - | + | - | - | - | - | + | +/- | - | +/- | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) | |
| #Host | #Human | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | |
|---|---|---|---|---|---|---|---|---|
| 22268 | human stool | Marseille | France | FRA | Europe | 43.2965 | 5.3698 |
Global distribution of 16S sequence HG315678 (>99% sequence identity) for Bacteroides neonati subclade from Microbeatlas 
 Aquatic Samples |
1979 |
 Soil Samples |
398 |
 Animal Samples |
29150 |
 Plant Samples |
171 |
| Total Samples | 31698 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Identification of Gut Microbiome Signatures Associated with Serotonin Pathway in Tryptophan Metabolism of Patients Undergoing Hemodialysis. | Kuo TH, Wu PH, Liu PY, Chuang YS, Tai CJ, Kuo MC, Chiu YW, Lin YT. | Int J Mol Sci | 10.3390/ijms262110463 | 2025 | |
| Characteristics of intestinal bacteriophages and their relationship with Bacteria and serum metabolites during quail sexual maturity transition. | Xiong X, Gong J, Lu T, Yuan L, Lan Y, Tu X. | BMC Vet Res | 10.1186/s12917-024-03945-9 | 2024 | | |
| Genetics | The Influence of Diet on the Composition and Function of Gut Microbiota in Four Snake Species. | Song H, Li X, Luo J, Wang J, Wu F, Jiang J, Chen J, Cheng Y, Yong Y, Duan M, Zhu G. | Ecol Evol | 10.1002/ece3.72204 | 2025 | |
| Gut microbiome and serum metabolome analyses identify biomarkers associated with sexual maturity in quails. | Xiong X, Xu J, Yan X, Wu S, Ma J, Wang Z, He Q, Gong J, Rao Y. | Poult Sci | 10.1016/j.psj.2023.102762 | 2023 | | |
| Phylogeny | Microbiota in Human Periodontal Abscess Revealed by 16S rDNA Sequencing. | Chen J, Wu X, Zhu D, Xu M, Yu Y, Yu L, Zhang W. | Front Microbiol | 10.3389/fmicb.2019.01723 | 2019 | |
| Genetics | Non-contiguous finished genome sequence and description of Bacteroides neonati sp. nov., a new species of anaerobic bacterium. | Cassir N, Croce O, Pagnier I, Benamar S, Couderc C, Robert C, Raoult D, La Scola B. | Stand Genomic Sci | 10.4056/sigs.5159098 | 2014 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive130976.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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