Pseudomonas plecoglossicida (CCUG 49623, CIP 106493, DSM 15088)

Name: Pseudomonas plecoglossicida (CCUG 49623, CIP 106493, DSM 15088)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13086

Type strain

Culture col. no. CCUG 49623 CIP 106493 DSM 15088 ATCC 700383 FPC 951 9 more

NCBI tax ID(s) 1215115 70775

Special Collections DSMZ CCUG JCM CIP

Links

Pseudomonas plecoglossicida CCUG 49623 is an aerobe, mesophilic, Gram-negative animal pathogen that was isolated from diseased ayu, Plecoglossus altevelis.

Gram-negative motile rod-shaped aerobe mesophilic animal pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 43905

ATCC 700383,CIP 106493,NCIMB 13649,LMG 21750,DSM 15088,CCUG 49623,LMG 23766,BCRC 17517,CCRC 17517,JCM 21584,NBRC 103162,VTT E-072699,IAM 15126

@ref 20215

Last LPSN update 2025-12-16 09:50:00

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas plecoglossicida

Full scientific name Pseudomonas plecoglossicida Nishimori et al. 2000

BacDive ID	Other strains from **Pseudomonas plecoglossicida** (4)	Type strain
134569	P. plecoglossicida CIP 106494, ATCC 700384, JCM 13296, NCIMB ...
139589	P. plecoglossicida CIP 106495, FPC 337
161340	P. plecoglossicida JCM 13298
175086	P. plecoglossicida 116274, DSM 116274

Morphology

Cell morphology

@ref	Gram stain	Cell shape
121868	negative	rod-shaped
125438
125438	negative
125439
125439	negative

Pigmentation

@ref	Production	Name
121868		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5701	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
41751	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121868	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5701	positive	growth	28	mesophilic
41751	positive	growth	30	mesophilic
58634	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic
121868	positive	growth	10-37
121868	negative	growth	5
121868	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
58634	aerobe
121868	obligate aerobe
125438	aerobe
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		98.9

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121868	NaCl	positive	growth	0-6 %
121868	NaCl		growth	8 %
121868	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
121868	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
121868	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
121868	17632 ChEBI	nitrate	+	reduction
121868	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
121868	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
121868	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
121868	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121868	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121868	amylase	-
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
121868	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121868	caseinase	-	3.4.21.50
121868	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
121868	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121868	gelatinase	-
68369	gelatinase	-		from API 20NE
121868	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
121868	lipase	-
68382	lipase (C 14)	-		from API zym
121868	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121868	ornithine decarboxylase	-	4.1.1.17
121868	oxidase	+
121868	protease	-
68382	trypsin	-	3.4.21.4	from API zym
121868	tryptophan deaminase	-
121868	tween esterase	-
121868	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121868	-	-	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
5701	+	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	-	+	+	+	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121868	not determinedn.d.	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	+	-	-	+	-	-	-	-	-	-	+	+	+	+	+	-	-	+	-	-	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	-	-	+	+	+	+	+	+	+	+	-	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Fishes

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
5701	diseased ayu, Plecoglossus altevelis	Plecoglossus altevelis	Tokushima	Japan	JPN	Asia
58634	Ayu,Plecoglossus altivelis		Tokushima	Japan	JPN	Asia
67770	Ayu (Plecoglossus altivelis) with bacterial haemorrhagic ascites	Plecoglossus altivelis	Tokushima Pref.	Japan	JPN	Asia
121868	Animal, Ayu, Plecoglossus altivelis		Tokushima	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB009457 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	543
Soil Samples	368
Animal Samples	799
Plant Samples	423
Total Samples	2133

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
5701		1	Risk group (German classification) According to TRBA 466
121868		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM68827v1 assembly for Pseudomonas plecoglossicida NBRC 103162 = DSM 15088	scaffold	GCA_000688275	1215115.4	2556921648	1215115	67.61
124043	ASM3016051v1 assembly for Pseudomonas plecoglossicida NBRC 103162	scaffold	GCA_030160515	70775.113	8119797510	70775	67.61
67770	ASM73066v1 assembly for Pseudomonas plecoglossicida NBRC 103162 = DSM 15088	contig	GCA_000730665	1215115.3	2585427685	1215115	60.41

Genome browser: GCA_000688275

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas plecoglossicida gene for 16S rRNA, partial sequence, strain: NBRC 103162	AB681970	1462	70775
5701	Pseudomonas plecoglossicida gene for 16S rRNA	AB009457	1498	70775
124043	Pseudomonas plecoglossicida NBRC 103162 gene for 16S rRNA, partial sequence.	LC752399	587	70775
124043	Pseudomonas plecoglossicida strain NBRC 103162 16S ribosomal RNA gene, partial sequence.	MH021844	1410	70775

GC content

@ref	GC-content (mol%)	Method
67770	62.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 DSM 15088
NCBI: GCA_000688275

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.90	no
125439	gram_stain	BacteriaNetⓘ	negative	99.10	no
125439	motility	BacteriaNetⓘ	yes	92.80	no
125439	spore_formation	BacteriaNetⓘ	no	98.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas plecoglossicida NBRC 103162 = DSM 15088
PATRIC: 1215115.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	98.45	yes
125438	spore-forming	spore-formingⓘ	no	86.84	no
125438	aerobic	aerobicⓘ	yes	92.26	yes
125438	thermophilic	thermophileⓘ	no	97.99	no
125438	flagellated	motile2+ⓘ	yes	92.01	no

Literature

Title	Authors	Journal	DOI	Year
Plant Growth-Promoting Pseudomonas sp. TR47 Ameliorates Pepper (Capsicum annuum L. var. conoides Mill) Growth and Tolerance to Salt Stress.	Bakelli A, Dif G, Djemouai N, Bouri M, Sahin F.	Curr Microbiol	10.1007/s00284-025-04217-x	2025
Draft Genome Sequences of Endophytic Pseudomonas Strains, Isolated from the Interior of Brassicaceae Plants.	Kaneko H, Furuya T.	Microbiol Resour Announc	10.1128/mra.01337-22	2023
Draft genome sequence data of a 4-nitrophenol- degrading bacterium, Pseudomonas alloputida strain PNP.	Arora PK, Saroj RS, Mishra R, Omar RA, Kumari P, Srivastava A, Garg SK, Singh VP.	Data Brief	10.1016/j.dib.2021.107390	2021
Detection of the carbapenemase gene bla_VIM-5 in members of the Pseudomonas putida group isolated from polluted Nigerian wetlands.	Adelowo OO, Vollmers J, Mausezahl I, Kaster AK, Muller JA.	Sci Rep	10.1038/s41598-018-33535-3	2018
Development of a recombinant adenovirus-vectored vaccine against Pseudomonas plecoglossicida in large yellow croaker (Larimichthys crocea).	Li S, Li Z, Wang M, Zhou J, Wang Y, Qin C, Li XC.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110991	2026
"Functional profiling and computational optimization of production of extracellular melanin from endophytic Pseudomonas plecoglossicida SSSK-2 isolated from Neolamarckia cadamba".	Singh S, Grover A, Sharma V, Kumar T, Santal AR, Chand K, Kumar S.	Int Microbiol	10.1007/s10123-025-00746-4	2025
Pseudomonas plecoglossicida hijacks host glycolysis to induce hypoglycemic shock in large yellow croakers ( Larimichthys crocea).	Sun YJ, Peng XZ, Tan HJ, He JG, Yan QP.	Zool Res	10.24272/j.issn.2095-8137.2025.326	2025
The two-component system PvgAS orchestrates virulence gene expression in response to osmolality in Pseudomonas plecoglossicida.	Ding H, Zheng Z, Ahat P, Song W, Zhang Y, Wang Q.	Microbiol Res	10.1016/j.micres.2025.128358	2026
Rapid qPCR detection of Pseudomonas plecoglossicida and antimicrobial peptide dynamics in infected Larimichthys polyactis.	Zhu J, Liu S, Liu H, Zhang T, Li Q, Chen H, Ye T, Guo D, Zhu J, Lou B, Liu F.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110638	2025
Establishment of a novel macrophage-like cell line from the head kidney of Larimichthys crocea: A useful cell model for investigating host-pathogen interactions.	Liu Y, Tao Z, Yin F, Zhou SM.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110995	2026
Pseudomonas plecoglossicida inoculation reshapes rhizosphere microbiome for BDE-47 dissipation in the alfalfa rhizosphere.	Qi X, Xu X, Xu C, Lv G, Cai J, Cheng Z, Yang Z, Yin H.	J Hazard Mater	10.1016/j.jhazmat.2025.138959	2025
BSA-seq and transcriptome analysis identification candidate genes associated with Pseudomonas plecoglossicida resistance in the large yellow croaker (Larimichthyscrocea).	Ye T, Liu F, Liang X, Guo D, Zhan W, Shao G, Lou B.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110533	2025
Comparison of the host-pathogen interactions between Pseudomonas plecoglossicida and Nocardia seriolea in a cell line derived from head kidney of yellow large croaker.	Jin LY, Li SY, Yin F, Tao Z, Xie X, Zhou SM.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110477	2025
Molecular characterization and functional analysis of Granzyme B in large yellow croaker (Larimichthys crocea).	Gong B, Zhang S, Zheng Y, Wang Y, Teng Y, Ni K, Chen M, Chen J, Chen X.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110969	2026
Molecular characterization of CL-11 in large yellow croaker (Larimichthys crocea) and its role in antibacterial defense.	Wu H, Luo W, Huang Y, Zhang J, Huang C, Ye K, Ren P, Han F.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110516	2025
Structural and functional insights into a novel aldehyde deformylating oxygenase with enhanced efficiency for biofuel applications.	Treesukkasem N, Visitsatthawong S, Buttranon S, Intasian P, Jaroensuk J, Maenpuen S, Sucharitakul J, Poddar H, Heyes DJ, Scrutton NS, Chaiyen P, Wongnate T.	FEBS J	10.1111/febs.70234	2025
Plant growth-promoting rhizobacteria enhance the recovery of submerged macrophytes and increase the absorption of greenhouse gases.	Zhu J, Wu Y, Zhang G, Wang C, Zhu Y, Li Z, Liu P, Zhang Y, Xu D, Wang C.	Water Res	10.1016/j.watres.2025.124562	2026
Transposon insertion sequencing analysis reveals conditional essential genes for infection in Pseudomonas plecoglossicida	Ding H, Ahat P, Song W, Zhang Y, Choi SH, Zhang Y, Wang Q.	Aquaculture		2025
Multiple probiotic effects of Ligilactobacillus murinus strain S27 on large yellow croaker (Larimichthys crocea): Promoting growth, improving intestinal health, and enhancing resistance against Pseudomonas plecoglossicida	Lin Z, Zeng J, Zhai Y, Shi Y, Chen X.	Aquaculture		2025
Regakine-1 homologue regulates leukocyte migration and activation in large yellow croaker (Larimichthys crocea).	Wang M, Li Q, Li C, Teng Y, Ao J, Chen X.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110664	2025
Development of a rapid and visual detection platform for Pseudomonas plecoglossicida in large yellow croaker (Larimichthys crocea) based on the RPA-CRISPR/Cas12a system	Jiang M, Xie J, Zhang C, Liu Y, Wang G, Wang W, Xu W.	Aquaculture		2025
Evaluation on the antibacterial activity of glycyrrhizin against Pseudomonas plecoglossicida in ayu fish (Plecoglossus altivelis)	Tao F, Cao JF, Liu YJ, Chen RY, Shi JJ, Li CY, Lu JF, Yang GJ, Chen J.	Aquaculture		2025
lafK contributes the regulation of swarming motility of Pseudomonas plecoglossicida and bacterial-host interaction.	He L, Mao M, Ge H, Zhang J, Zhang J, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2024.110071	2025
Dual stable isotope tracing the source and composition of biogenic substance in microalgae-bacteria symbiosis: What do the bacteria contribute to the microalgae bloom?	Chen B, Ouyang W, Yang J, Chen Y, Yan P, Fang F, Li Z, Guo J.	Sci Total Environ	10.1016/j.scitotenv.2025.179732	2025
Denitrification characteristics and potential application of a novel aerobic denitrifying bacterium, Pseudomonas plecoglossicida, isolated from the Exopalaemon carinicauda pond	Shen S, Zhou Y, Qian H, Wu C, Gao H, Lai X.	Aquac Int	10.1007/s10499-024-01660-8	2024
The Role of Glyceraldehyde-3-Phosphate Dehydrogenase in 2-Ketogluconic Acid Industrial Production Strain Pseudomonas plecoglossicida JUIM01.	Sun L, Tang DJ, Zhang QN, Li LL, Zhang L, Zan XY, Cui FJ, Sun L, Sun WJ.	Foods	10.3390/foods14223830	2025
Dietary Astragalus polysaccharides enhance potency of inactivated Pseudomonas plecoglossicida vaccine in large yellow croaker (Larimichthys crocea).	Song Y, Chen H, An H, Wang Y, Shao J, Yan M, Ao J, Chen X, Zhang W.	Fish Shellfish Immunol	10.1016/j.fsi.2024.110107	2025
Evaluation of genomic prediction of resistance to visceral white-spot disease in large yellow croaker (Larimichthys crocea)	Yuan Y, Zhou M, Li Z, Jiang D, Wang Z, Fang M.	Aquaculture		2025
Is it a potential pneumonia pathogen in Pseudomonas putida group? First isolation and identification of Pseudomonas plecoglossicida in clinic and a comparison of pathogenicity with Pseudomonasputida.	Lin Y, Zhang C, Tan N, Chen Y, He J, Li Y, Yuan C, Lin C.	Microb Pathog	10.1016/j.micpath.2024.106910	2024
Molecular characterization and functional analysis of IL-18 in large yellow croaker (Larimichthys crocea).	Wang Y, Ye J, Luo Y, Weng Z, Lu Q, Xia C, Ma F, Kang F, Chen X, Zhang W.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110398	2025
A novel small non-coding RNA 562 mediates the virulence of Pseudomonas plecoglossicida by regulating the expression of fliP, a key component of flagella T3SS.	He L, Mao M, Zhao L, Li Q, Zhuang Z, Wang X, Huang H, Wang Q, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109752	2024
NLRC3 regulates RIP2, STING, TBK1, and TRAF6 mediated type I IFN signaling and inflammatory response in large yellow croaker Larimichthys crocea.	Xu YQ, Li Y, Han KH, Zhang JX, Li KQ, Jiang J, Sun ZH, Wang YL, Jiang YH, Zou PF.	Fish Shellfish Immunol	10.1016/j.fsi.2025.110351	2025
fliC Mediates Pseudomonas plecoglossicida's Hijack of Inflammatory Immunity and Glucose Metabolism in the Large Yellow Croaker.	Peng X, Sun Y, Tan H, Pang H, Zhao C, Yan Q.	Antioxidants (Basel)	10.3390/antiox14101189	2025
Endophyte-assisted non-host plant Tillandsia brachycaulos enhance indoor formaldehyde removal.	Li J, Pang S, Tu Q, Li Y, Chen S, Lin S, Zhong J.	J Biotechnol	10.1016/j.jbiotec.2024.07.022	2024
Can cadmium-contaminated rice be used to produce food additive sodium erythorbate?	Sun L, Zhang X, Zhou Y, Peng Z, Cui F, Zhou Q, Man Z, Guo J, Sun W.	Food Chem	10.1016/j.foodchem.2024.140923	2025
Unraveling the immune functions of large yellow croaker Tmem208 in response to Pseudomonas plecoglossicida: Insights from cloning, expression profiling, and transcriptome analysis.	Huang Y, Gou T, Li W, Han F.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109584	2024
The bacterial pathogen Pseudomonas plecoglossicida, its epidemiology, virulence factors, vaccine development, and host-pathogen interactions.	Mao Z, Li S, Li Y, Jia T.	J Aquat Anim Health	10.1002/aah.10215	2024
Pseudomonas plecoglossicida (NR_114226) as a novel biocontrol agent against Fusarium crown rot of wheat	Makhlouf KE, Karima B, Slimane M.	Journal of phytopathology.		2024
Iron loss and hypoxia are involved in lethal Pseudomonas plecoglossicida infections in the orange-spotted grouper Epinephelus coioides	Sun Y, Weng S, Xu B, Dong C, He J.	Aquaculture		2024
Unveiling the molecular characteristics and antibacterial activity of tandem-repeat-type Galectin-8 in large yellow croaker (Larimichthys crocea).	Yang Y, Wu B, Zou W, Han F.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109849	2024
C1QBP is a critical component in the immune response of large yellow croaker (Larimichthys crocea) against visceral white spot disease caused by Pseudomonas plecoglossicida.	Peng J, Zhang S, Han F, Wang Z.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109372	2024
Evaluation of immunogenicity and protective efficacy of the outer membrane porin F (OprF) against Pseudomonas plecoglossicida in large yellow croaker (Larimichthys crocea).	He L, Kang J, Chen X, Qin P, Chen X.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109427	2024
PvgAS: A novel two-component system that controls type III and type VI secretion systems and virulence in the fish pathogen Pseudomonas plecoglossicida	Tao Z, Ye H, Zhang C, Zhou S, Wang K, Zhang M, Xie J, Munang'andu HM, Xu C, Wang P, Yan X.	Aquaculture	10.1016/j.aquaculture.2023.740102	2024
A newly identified secretory phospholipase A2 group XIIA homolog (LcPLA2XIIA) in Larimichthys crocea exhibits antimicrobial and antitumor activities.	Li S, Qin C, Peng SM, Wang YB, Wang Y, Wang XS, Shi JG, Li XC.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109924	2024
Characterization and Functional Analysis of Trim38 in the Immune Response of the Large Yellow Croaker (Larimichthys crocea) Against Pseudomonas plecoglossicida Infection.	Li Q, Wu H, Huang Y, Yekefenhazi D, Zou W, Han F.	Int J Mol Sci	10.3390/ijms26094150	2025
An aluminium adjuvant compound with ginseng stem leaf saponins enhances the potency of inactivated Pseudomonas plecoglossicida vaccine in large yellow croaker (Larimichthys crocea).	Sun F, Wu Y, Zhang Y, Liu Q, Wang Q, Liu X.	Fish Shellfish Immunol	10.1016/j.fsi.2023.109243	2024
The anti-inflammatory role of zDHHC23 through the promotion of macrophage M2 polarization and macrophage necroptosis in large yellow croaker (Larimichthys crocea).	Dai T, Zhao Z, Zhu T, Fei C, Nie L, Chen J.	Front Immunol	10.3389/fimmu.2024.1401626	2024
The detection of Edwardsiella tarda by aptamer-based qPCR.	Bai Y, Li X, Yan W, Zhao L, Huang L, Yan Q, Wang J, Weng Q, Zheng J.	Front Vet Sci	10.3389/fvets.2025.1635525	2025
Lactobacillus plantarum E2 regulates intestinal microbiota and alleviates Pseudomonas plecoglossicida induced inflammation and apoptosis in zebrafish (Danio rerio).	Liu R, Huang Y, Chen Y, Huang D, Zhao Z, He T, Shi Y, Chen X.	Fish Shellfish Immunol	10.1016/j.fsi.2023.109170	2023
Molecular Characterization of a Transcriptional Regulator GntR for Gluconate Metabolism in Industrial 2-Ketogluconate Producer Pseudomonas plecoglossicida JUIM01.	Qu M, Li L, Zan X, Cui F, Sun L, Sun W.	Microorganisms	10.3390/microorganisms13061395	2025
Oral vaccination with feed-based live attenuated vaccine protects large yellow croaker against Pseudomonas plecoglossicida infection	Huang J, Yin X, Munang'andu HM, Xu C, Li W, Xie J, Yan X, Tao Z.	Aquaculture		2023
sRNA113 regulates Pseudomonas plecoglossicida motility to affect immune response against infection in pearl gentian grouper.	He L, Mao MQ, Zhao LM, Li Q, Ge H, Zhang JN, Zhang JL, Yan QP.	Zool Res	10.24272/j.issn.2095-8137.2024.333	2025
Transcriptomic analysis of the inhibition mechanisms against Pseudomonas plecoglossicida by antibacterial aptamer B4.	Tan Y, Lin X, Huang L, Yan Q, Wang J, Weng Q, Zhengzhang Y, Chen Y, Ma Y, Zheng J.	Front Vet Sci	10.3389/fvets.2024.1511234	2024
The involvement of the T6SS vgrG gene in the pathogenicity of Pseudomonas plecoglossicida.	Yang D, Zhao L, Li Q, Huang L, Qin Y, Wang P, Zhu C, Yan Q.	J Fish Dis	10.1111/jfd.13829	2023
The c-di-GMP signalling component YfiR regulates multiple bacterial phenotypes and virulence in Pseudomonas plecoglossicida.	Wang Y, Jin Y, Sun F, Zhang Y, Liu Q, Wang Q, Yang D, Zhang Y.	J Appl Microbiol	10.1093/jambio/lxad157	2023
Disentangling genetic variation for endurance and resistance to visceral white-nodules disease in large yellow croaker (Larimichthys crocea) using genome information	Li Z, Fang M, Tang X, Zhang D, Wang Z.	Aquaculture		2024
The probiotic roles of Lactiplantibacillus plantarum E2 as a dietary supplement in growth promotion and disease resistance of juvenile large yellow croaker (Larimichthys crocea)	Liu R, Wang S, Huang D, Huang Y, He T, Chen X.	Aquaculture		2024
Flagellar gene fliP contributes to the virulence of Pseudomonas plecoglossicida by regulating its motility	He L, Zhao L, Li Q, Huang L, Qin Y, Zhuang Z, Wang X, Huang H, Zhang J, Zhang J, Yan Q.	Aquaculture	10.1016/j.aquaculture.2023.739874	2023
Bioremediation of PBDEs and heavy metals co-contaminated soil in e-waste dismantling sites by Pseudomonas plecoglossicida assisted with biochar.	Qi X, Zhu M, Yuan Y, Dang Z, Yin H.	J Hazard Mater	10.1016/j.jhazmat.2023.132408	2023
Simultaneous immobilization of multiple heavy metal(loid)s in contaminated water and alkaline soil inoculated Fe/Mn oxidizing bacterium.	Wu Y, Wang S, Xu J, Zang F, Long S, Wu Y, Wang Y, Nan Z.	J Environ Sci (China)	10.1016/j.jes.2023.11.010	2025
Characterization and Transcriptional Regulation of the 2-Ketogluconate Utilization Operon in Pseudomonas plecoglossicida.	Sun L, Yang W, Li L, Wang D, Zan X, Cui F, Qi X, Sun L, Sun W.	Microorganisms	10.3390/microorganisms12122530	2024
Imidacloprid degrading efficiency of Pseudomonas plecoglossicida MBSB-12 isolated from pesticide contaminated tea garden soil of Assam.	Borah S, Hazarika DJ, Baruah M, Bora SS, Gogoi M, Boro RC, Barooah M.	World J Microbiol Biotechnol	10.1007/s11274-022-03507-x	2022
Biodegradation of polystyrene by intestinal symbiotic bacteria isolated from mealworms, the larvae of Tenebrio molitor	Park JW, Kim M, Kim Sy, Bae J, Kim Tj.	Heliyon.		2023
The galU gene is required for in vivo survival of pseudomonas plecoglossicida in large yellow croaker (Larimichthys crocea).	Shu FL, Jin LY, Liu H, Tao Z, Yin F, Xie JS, Zhou SM.	J Fish Dis	10.1111/jfd.13737	2023
Y12F mutation in Pseudomonas plecoglossicida S7 lipase enhances its thermal and pH stability for industrial applications: a combination of in silico and in vitro study.	Choudhary P, Waseem M, Kumar S, Subbarao N, Srivastava S, Chakdar H.	World J Microbiol Biotechnol	10.1007/s11274-023-03518-2	2023
flgC gene is involved in the virulence regulation of Pseudomonas plecoglossicida and affects the immune response of Epinephelus coioides.	Yang D, Zhao L, Li Q, Huang L, Qin Y, Wang P, Zhu C, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2022.108512	2023
Cloning, subcellular localization and antibacterial functional analysis of NK-lysin in yellow drum (Nibea albiflora).	Huang Y, Wu B, Yang Y, Li W, Han F.	Fish Shellfish Immunol	10.1016/j.fsi.2023.109061	2023
Identification of Galectin 9 and its antibacterial function in yellow drum (Nibea albiflora).	Luo S, Wu B, Li Q, Li W, Wang Z, Song Q, Han F.	Fish Shellfish Immunol	10.1016/j.fsi.2023.109044	2023
Cell-Free Extracts of the Ginseng Soil Bacterium Pseudomonas plecoglossicida Promote Suppression of Resistance of American Ginseng (Panax quinquefolius) to Root Rot Caused by Ilyonectria mors-panacis.	Goodwin PH, Hsiang T.	Biology (Basel)	10.3390/biology13090671	2024
Identification and characterization of LuxR solo homolog PplR in pathogenic Pseudomonas plecoglossicida NB2011.	Li S, Jia T, Chi Y, Chen J, Mao Z.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1458976	2024
Characterization of 4 deletion mutants of Pseudomonas plecoglossicida and their potential for live attenuated vaccines in large yellow croaker (Larimichthys crocea).	Li Y, Chi Y, Li S, Jia T, Mao Z.	Fish Shellfish Immunol	10.1016/j.fsi.2022.06.034	2022
Pseudomonas plecoglossicida infection induces neutrophil autophagy-driven NETosis in large yellow croaker Larimichthys crocea.	Cao JF, Chen J.	Front Immunol	10.3389/fimmu.2024.1521080	2024
Establishment of Nested PCR for the Detection of Pseudomonas plecoglossicida and Epidemiological Survey of Larimichthys crocea in the Southeast Coastal Region.	Duan X, Li J, Shi H, Tao Z, Wei X, Ye Y, Guo B.	Animals (Basel)	10.3390/ani14101427	2024
Function of the rpoD gene in Pseudomonas plecoglossicida pathogenicity and Epinephelus coioides immune response.	Xin G, Zhao L, Zhuang Z, Wang X, Fu Q, Huang H, Huang L, Qin Y, Zhang J, Zhang J, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2022.06.045	2022
Zinc and copper supplements enhance trichloroethylene removal by Pseudomonas plecoglossicida in water.	Qiu L, Lok KS, Lu Q, Zhong H, Guo X, Shim H.	Environ Technol	10.1080/09593330.2022.2069518	2023
Understanding the role of biochar in affecting BDE-47 biodegradation by Pseudomonas plecoglossicida: An integrated analysis using chemical, biological, and metabolomic approaches.	Qi X, Yin H, Zhu M, Shao P, Dang Z.	Water Res	10.1016/j.watres.2022.118679	2022
A Duplex PCR Assay for Rapid Detection of Klebsiella pneumoniae and Chryseobacterium in Large Yellow Croaker Fish.	Hu G, Yin L, Luo X, Miao Y, Yu J.	Foodborne Pathog Dis	10.1089/fpd.2023.0149	2024
Molecular epidemiology of extended-spectrum beta-lactamase producing Gram-negative bacteria among surgical site infection patients in Ethiopia: a multicenter prospective study.	Worku S, Abebe T, Abdissa A, Berhan A, Alemu A, Beyene GT, Seyoum B, Mihret A, Swedberg G.	BMC Infect Dis	10.1186/s12879-025-11531-z	2025
Immune responses and inorganic ion transport regulations of Epinephelus coioides in response to L321_RS13075 gene of Pseudomonas plecoglossicida.	Qi W, Gao Q, Tian J, Wu B, Lin M, Qi S, Yan Q, Huang L.	Fish Shellfish Immunol	10.1016/j.fsi.2021.12.036	2022
Polyactin A and CpG enhance inactivated Pseudomonas plecoglossicida vaccine potency in large yellow croaker (Larimichthys crocea).	Wang W, Wang W, Xu W, Liu Q, Zhang Y, Liu X.	Fish Shellfish Immunol	10.1016/j.fsi.2021.11.008	2022
Pathogenicity of fish pathogen Pseudomonas plecoglossicida and preparation of its inactivated vaccine.	Yan L, Jin D, Yang S, Li X, Li H, Hu S, Sun Y, Yi G, Wang P, Rang J, Xia L.	Microb Pathog	10.1016/j.micpath.2022.105488	2022
Functional insights of a two-component system sensor kinase GacS in a fish pathogen, Pseudomonas plecoglossicida	Zhou SM, Wang Y, Shu FL, Tao Z, Xie X, Xie JS, Ma RR, Yin F.	Aquaculture		2022
The contribution of exbB gene to pathogenicity of Pseudomonas plecoglossicida and its interactions with Epinephelus coioides.	Tang Y, Jiao J, Zhao L, Zhuang Z, Wang X, Fu Q, Huang H, Huang L, Qin Y, Zhang J, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2021.12.026	2022
Genomic selection for visceral white-nodules diseases resistance in large yellow croaker	Bai Y, Wang J, Zhao J, Ke Q, Qu A, Deng Y, Zeng J, Gong J, Chen J, Pan Y, Chi H, Gong H, Zhou T, Xu P.	Aquaculture	10.1016/j.aquaculture.2022.738421	2022
The Functional Characterization of the 6-Phosphogluconate Dehydratase Operon in 2-Ketogluconic Acid Industrial Producing Strain Pseudomonas plecoglossicida JUIM01.	Sun WJ, Zhang QN, Li LL, Qu MX, Zan XY, Cui FJ, Zhou Q, Wang DM, Sun L.	Foods	10.3390/foods13213444	2024
Integration of RNA-seq and RNAi provides a novel insight into the effect of pvdE gene to the pathogenic of Pseudomonas plecoglossicida and on the immune responses of orange-spotted grouper (Epinephelus coioides)	Xin G, Wang F, Zhao L, Qin Y, Huang L, Yan Q.	Aquaculture	10.1016/j.aquaculture.2020.735695	2021
Cooperative mechanisms of LexA and HtpG in the regulation of virulence gene expression in Pseudomonas plecoglossicida.	He R, Zuo Y, Li Q, Yan Q, Huang L.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100351	2025
Preliminary studies on the different roles of T6SSs in pathogenicity of Pseudomonas plecoglossicida NB2011.	Jin J, Li Y, Huang M, Li S, Mao Z.	J Fish Dis	10.1111/jfd.13479	2021
The contributions of fliG gene to the pathogenicity of Pseudomonas plecoglossicida and pathogen-host interactions with Epinephelus coioides.	Jiao J, Zhao L, Huang L, Qin Y, Su Y, Zheng W, Zhang J, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2021.09.032	2021
Integrative analysis of GWAS and transcriptome reveals p53 signaling pathway mediates resistance to visceral white-nodules disease in large yellow croaker.	Bai Y, Qu A, Liu Y, Chen X, Wang J, Zhao J, Ke Q, Chen L, Chi H, Gong H, Zhou T, Xu P.	Fish Shellfish Immunol	10.1016/j.fsi.2022.09.033	2022
Genome-wide association study and transcriptomic analysis reveal the crucial role of sting1 in resistance to visceral white-nodules disease in Larimichthys polyactis.	Zhu J, Liu F, Ye T, Li Q, Liu H, Liu S, Zhang T, Guo D, Zhu J, Lou B.	Front Immunol	10.3389/fimmu.2025.1562307	2025
Integration of RNA-seq and RNAi reveals the contribution of znuA gene to the pathogenicity of Pseudomonas plecoglossicida and to the immune response of Epinephelus coioides.	He L, Wang L, Zhao L, Zhuang Z, Wang X, Huang H, Fu Q, Huang L, Qin Y, Wang P, Yan Q.	J Fish Dis	10.1111/jfd.13502	2021
Transcriptome analysis revealed multiple immune processes and energy metabolism pathways involved in the defense response of the large yellow croaker Larimichthys crocea against Pseudomonas plecoglossicida.	Zhang Y, Lu L, Li C, Shao G, Chen X.	Comp Biochem Physiol Part D Genomics Proteomics	10.1016/j.cbd.2021.100886	2021
Effects on Pseudomonas plecoglossicida 2,4-D and Humic Substances on the Growth, Pigment Indices and Concentration of Hormones in Wheat Seedlings Grown under Water Deficit.	Feoktistova A, Timergalin M, Chetverikov S, Nazarov A, Kudoyarova G.	Microorganisms	10.3390/microorganisms11030549	2023
Characterization of a transcriptional regulator PtxS from Pseudomonas plecoglossicida for regulating 2-ketogluconic acid metabolism.	Sun L, Wang D, Sun W, Zhang X, Cui F, Su C, Zhang X, Xu G, Shi J, Xu Z.	Int J Biol Macromol	10.1016/j.ijbiomac.2021.01.198	2021
Plant-Disease-Suppressive and Growth-Promoting Activities of Endophytic and Rhizobacterial Isolates Associated with Citrullus colocynthis.	Al-Shuaibi BK, Kazerooni EA, Hussain S, Velazhahan R, Al-Sadi AM.	Pathogens	10.3390/pathogens12111275	2023
Molecular cloning and functional characterization of RIP1 in large yellow croaker Larimichthys crocea.	Zou PF, Li KQ, Li Y, Shen YJ, Zhang ZP, Wang YL.	Fish Shellfish Immunol	10.1016/j.fsi.2022.02.024	2022
Molecular insights of a novel fish Toll-like receptor 9 homologue in Nibea albiflora to reveal its function as PRRs.	Liu H, Yang M, Tang X, Liu J, Zheng L, Xu D, Chi C, Lv Z.	Fish Shellfish Immunol	10.1016/j.fsi.2021.09.021	2021
Larimichthys crocea (large yellow croaker): A bibliometric study.	Zhang H, Wang J, Jing Y.	Heliyon	10.1016/j.heliyon.2024.e37393	2024
Epidemiological investigation on diseases of Larimichthys crocea in Ningbo culture area.	Xu S, Ge M, Feng J, Wei X, Tan H, Liang Z, Tong G.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1420995	2024
Under the Hood: Understanding the Features of Mucin in Pseudomyxoma Peritonei.	Villarejo-Campos P, Garcia-Arranz M, Qian S, Jimenez de Los Galanes S, Dominguez-Prieto V, Velez-Pinto JF, Guijo Castellano I, Jimenez-Fuertes M, Guadalajara H, Garcia-Olmo D.	J Clin Med	10.3390/jcm12124007	2023
Molecular characterization, expression pattern and immunologic function of CD82a in large yellow croaker (Larimichthys crocea).	Liu Y, Bai Y, Chen S, Pu F, Li Y, Chi H, Zheng Z, Xu P, Zhou T.	Front Immunol	10.3389/fimmu.2024.1301877	2024
Preliminary characterization of pathogen-detection activities of serum antibodies from the banded houndshark Triakis scyllium.	Kondo H, Fujimura T, Murotani F, Yazawa R, Tani R, Hirono I.	Dev Comp Immunol	10.1016/j.dci.2021.104186	2021
A 2-ketogluconate kinase KguK in Pseudomonas plecoglossicida JUIM01: Enzymatic characterization and its role in 2-keto-d-gluconic acid metabolism.	Sun L, Wang D, Sun W, He X, Cui F, Zhang X, Gong J, Shi J, Xu Z.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.10.169	2020
An outbreak of visceral white nodules disease caused by Pseudomonas plecoglossicida at a water temperature of 12°C in cultured large yellow croaker (Larimichthys crocea) in China.	Li C, Wang S, Ren Q, He T, Chen X.	J Fish Dis	10.1111/jfd.13206	2020
Characterization of a highly lethal barramundi (Lates calcarifer) model of Pseudomonas plecoglossicida infection.	Sun Y, Zhu Z, Weng S, He J, Dong C.	Microb Pathog	10.1016/j.micpath.2020.104516	2020
[N-Domain of ArdA Antirestriction Proteins Inhibits the Repression Activity of the Histone-Like H-NS Protein].	Melkina OE, Zavilgelsky GB.	Mol Biol (Mosk)	10.31857/s0026898421030125	2021
Anti-Oomycete Activity and Pepper Root Colonization of Pseudomonas plecoglossicida YJR13 and Pseudomonas putida YJR92 against Phytophthora capsici.	Volynchikova E, Kim KD.	Plant Pathol J	10.5423/ppj.oa.01.2023.0001	2023
Co-interaction of nitrofuran antibiotics and the saponin-rich extract on gram-negative bacteria and colon epithelial cells.	Grzywaczyk A, Smulek W, Olejnik A, Guzik U, Nowak A, Kaczorek E.	World J Microbiol Biotechnol	10.1007/s11274-023-03669-2	2023
QTL Mapping-Based Identification of Visceral White-Nodules Disease Resistance Genes in Larimichthys polyactis.	Li Q, Zhu J, Liu S, Liu H, Zhang T, Ye T, Lou B, Liu F.	Int J Mol Sci	10.3390/ijms252010872	2024
The microbiome of pseudomyxoma peritonei: a scoping review.	Portela DS, Jain A, Flood M, Lavelle A, Guerra G, Patel M, Aziz O, Warrier S, Heriot A, Mohan H.	Pleura Peritoneum	10.1515/pp-2024-0016	2025
Genomic characterization of the dominating Beta, V2 variant carrying vaccinated (Oxford-AstraZeneca) and nonvaccinated COVID-19 patient samples in Bangladesh: A metagenomics and whole-genome approach.	Rahaman MM, Sarkar MMH, Rahman MS, Islam MR, Islam I, Saha O, Akter S, Banu TA, Jahan I, Habib MA, Goswami B, Bari L, Malek MA, Khan MS.	J Med Virol	10.1002/jmv.27537	2022
Integration of RNA-seq and RNAi provides a novel insight into the immune responses of Epinephelus coioides to the impB gene of Pseudomonas plecoglossicida.	Liu Z, Zhao L, Huang L, Qin Y, Zhang J, Zhang J, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2020.06.023	2020
The Growth-Inhibitory Effect of Increased Planting Density Can Be Reduced by Abscisic Acid-Degrading Bacteria.	Vysotskaya L, Martynenko E, Ryabova A, Kuzmina L, Starikov S, Chetverikov S, Gaffarova E, Kudoyarova G.	Biomolecules	10.3390/biom13111668	2023
Molecular and functional identification of a beta-defensin homolog in large yellow croaker (Larimichthys crocea).	Li K, Li W, Chen X, Luo T, Mu Y, Chen X.	J Fish Dis	10.1111/jfd.13324	2021
Characterization and functional study of a chimera galectin from yellow drum Nibea albiflora.	Wu B, Song Q, Li W, Xie Y, Luo S, Tian Q, Zhao R, Liu T, Wang Z, Han F.	Int J Biol Macromol	10.1016/j.ijbiomac.2021.07.118	2021
Temperature-specific expression of cspA1 contributes to activation of sigX during pathogenesis and intracellular survival in Pseudomonas plecoglossicida	Huang L, Zhao L, Qi W, Xu X, Zhang J, Zhang J, Yan Q.	Aquaculture	10.1016/j.aquaculture.2019.734861	2020
Gold extraction at the molecular level using alpha- and beta-cyclodextrins.	Braga SS.	Beilstein J Org Chem	10.3762/bjoc.21.89	2025
Comparative secretome analysis reveals cross-talk between type III secretion system and flagella assembly in Pseudomonas plecoglossicida.	Qin P, Luan Y, Yang J, Chen X, Wu T, Li Y, Munang'andu HM, Shao G, Chen X.	Heliyon	10.1016/j.heliyon.2023.e22669	2023
Aryl hydrocarbon receptor is required for immune response in Epinephelus coioides and Danio rerio infected by Pseudomonas plecoglossicida.	He R, Zhao L, Xu X, Zheng W, Zhang J, Zhang J, Yan Q, Huang L.	Fish Shellfish Immunol	10.1016/j.fsi.2019.12.084	2020
Effects of Humic Substances on the Growth of Pseudomonas plecoglossicida 2,4-D and Wheat Plants Inoculated with This Strain.	Feoktistova A, Bakaeva M, Timergalin M, Chetverikova D, Kendjieva A, Rameev T, Hkudaygulov G, Nazarov A, Kudoyarova G, Chetverikov S.	Microorganisms	10.3390/microorganisms10051066	2022
Time-resolved dual RNA-seq of tissue uncovers Pseudomonas plecoglossicida key virulence genes in host-pathogen interaction with Epinephelus coioides.	Luo G, Sun Y, Huang L, Su Y, Zhao L, Qin Y, Xu X, Yan Q.	Environ Microbiol	10.1111/1462-2920.14884	2020
Acquisition of a type VI secretion system is critical for Pseudomonas plecoglossicida induced granulomas in fish internal organs	Tao Z, Xu Y, Zhou S, Qian D, Liu M, Li W, Xu W, Yan X.	Aquaculture	10.1016/j.aquaculture.2019.734629	2020
Coupling of biostimulation and bioaugmentation for enhanced bioremoval of chloroethylenes and BTEX from clayey soil.	Li J, Lu Q, Odey EA, Lok KS, Pan B, Zhang Y, Shim H.	Ecotoxicology	10.1007/s10646-020-02323-z	2021
Design combinations of evolved phage and antibiotic for antibacterial guided by analyzing the phage resistance of poorly antimicrobial phage.	Xu Z, Ding Z, Shi L, Xie Y, Zhang Y, Sao S, Wang Q, Liu Q.	Microbiol Spectr	10.1128/spectrum.00958-23	2023
Integrated dual RNA-seq and dual iTRAQ of infected tissue reveals the functions of a diguanylate cyclase gene of Pseudomonas plecoglossicida in host-pathogen interactions with Epinephelus coioides.	Luo G, Zhao L, Xu X, Qin Y, Huang L, Su Y, Zheng W, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2019.11.008	2019
Mechanistic insight into the roles of Pseudomonas plecoglossicida clpV gene in host-pathogen interactions with Larimichthys crocea by dual RNA-seq.	Tang Y, Sun Y, Zhao L, Xu X, Huang L, Qin Y, Su Y, Yi G, Yan Q.	Fish Shellfish Immunol	10.1016/j.fsi.2019.07.066	2019
Deciphering Functions of a Putative Histidinol Dehydrogenase in Acidovorax citrulli by Phenotypic and Proteomic Analyses	Cho Y, Rhyu H, Lee S, Kim D, Kim D, Lee J, Han S.	Plant Pathol J		2025
Metagenome-Assembled Genomes and Metatranscriptome Analysis of Perfluorooctane Sulfonate-Reducing Bacteria Enriched From Activated Sludge.	Sorn S, Matsuura N, Honda R.	Environ Microbiol	10.1111/1462-2920.70087	2025
PCB-77 biodegradation potential of biosurfactant producing bacterial isolates recovered from contaminated soil.	Sandhu M, Paul AT, Prockow J, de la Lastra JMP, Jha PN.	Front Microbiol	10.3389/fmicb.2022.952374	2022
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The Temperature-Regulation of Pseudomonas aeruginosa cmaX-cfrX-cmpX Operon Reveals an Intriguing Molecular Network Involving the Sigma Factors AlgU and SigX.	Bouffartigues E, Si Hadj Mohand I, Maillot O, Tortuel D, Omnes J, David A, Tahrioui A, Duchesne R, Azuama CO, Nusser M, Brenner-Weiss G, Bazire A, Connil N, Orange N, Feuilloley MGJ, Lesouhaitier O, Dufour A, Cornelis P, Chevalier S.	Front Microbiol	10.3389/fmicb.2020.579495	2020
Gold Dissolution from Ore with Iodide-Oxidising Bacteria.	Khaing SY, Sugai Y, Sasaki K.	Sci Rep	10.1038/s41598-019-41004-8	2019
Identification of polybacterial communities in patients with postoperative, posttraumatic, and endogenous endophthalmitis through 16S rRNA gene libraries.	Jayasudha R, Narendran V, Manikandan P, Prabagaran SR.	J Clin Microbiol	10.1128/jcm.02093-13	2014
Genetic, Epigenetic, Genomic and Microbial Approaches to Enhance Salt Tolerance of Plants: A Comprehensive Review.	Saradadevi GP, Das D, Mangrauthia SK, Mohapatra S, Chikkaputtaiah C, Roorkiwal M, Solanki M, Sundaram RM, Chirravuri NN, Sakhare AS, Kota S, Varshney RK, Mohannath G.	Biology (Basel)	10.3390/biology10121255	2021
Transcriptome profiling of avian pathogenic Escherichia coli and the mouse microvascular endothelial cell line bEnd.3 during interaction.	Wang P, Meng X, Li J, Chen Y, Zhang D, Zhong H, Xia P, Cui L, Zhu G, Wang H.	PeerJ	10.7717/peerj.9172	2020
Mixed Contaminants: Occurrence, Interactions, Toxicity, Detection, and Remediation.	Goutam Mukherjee A, Ramesh Wanjari U, Eladl MA, El-Sherbiny M, Elsherbini DMA, Sukumar A, Kannampuzha S, Ravichandran M, Renu K, Vellingiri B, Kandasamy S, Valsala Gopalakrishnan A.	Molecules	10.3390/molecules27082577	2022
Biodegradation of Mixed PAHs by PAH-Degrading Endophytic Bacteria.	Zhu X, Ni X, Waigi MG, Liu J, Sun K, Gao Y.	Int J Environ Res Public Health	10.3390/ijerph13080805	2016
Textile dye removal from wastewater effluents using bioflocculants produced by indigenous bacterial isolates.	Buthelezi SP, Olaniran AO, Pillay B.	Molecules	10.3390/molecules171214260	2012
Pearl Millet Genetic Traits Shape Rhizobacterial Diversity and Modulate Rhizosphere Aggregation.	Ndour PMS, Gueye M, Barakat M, Ortet P, Bertrand-Huleux M, Pablo AL, Dezette D, Chapuis-Lardy L, Assigbetse K, Kane NA, Vigouroux Y, Achouak W, Ndoye I, Heulin T, Cournac L.	Front Plant Sci	10.3389/fpls.2017.01288	2017
Phosphate Solubilizing Rhizobacteria Could Have a Stronger Influence on Wheat Root Traits and Aboveground Physiology Than Rhizosphere P Solubilization.	Elhaissoufi W, Khourchi S, Ibnyasser A, Ghoulam C, Rchiad Z, Zeroual Y, Lyamlouli K, Bargaz A.	Front Plant Sci	10.3389/fpls.2020.00979	2020
Arginine deaminase from Pseudomonas aeruginosa PS2: purification, biochemical characterization and in-vitro evaluation of anticancer activity.	Bala K, Husain I, Sharma A.	3 Biotech	10.1007/s13205-020-02212-6	2020
Genetic diversity and ecological evaluation of fluorescent pseudomonads isolated from the leaves and roots of potato plants.	Someya N, Morohoshi T, Ikeda T, Tsuchiya K, Ikeda S.	Microbes Environ	10.1264/jsme2.me11237	2012
Plant growth-promoting traits of biocontrol potential bacteria isolated from rice rhizosphere.	Gopalakrishnan S, Upadhyaya H, Vadlamudi S, Humayun P, Vidya MS, Alekhya G, Singh A, Vijayabharathi R, Bhimineni RK, Seema M, Rathore A, Rupela O.	Springerplus	10.1186/2193-1801-1-71	2012
Cultivation to improve in vivo solubility of overexpressed arginine deiminases in Escherichia coli and the enzyme characteristics.	Wang Y, Li YZ.	BMC Biotechnol	10.1186/1472-6750-14-53	2014
Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis.	Jun SR, Wassenaar TM, Nookaew I, Hauser L, Wanchai V, Land M, Timm CM, Lu TY, Schadt CW, Doktycz MJ, Pelletier DA, Ussery DW.	Appl Environ Microbiol	10.1128/aem.02612-15	2016
Isolation of bacteriophages specific to a fish pathogen, Pseudomonas plecoglossicida, as a candidate for disease control.	Park SC, Shimamura I, Fukunaga M, Mori KI, Nakai T.	Appl Environ Microbiol	10.1128/aem.66.4.1416-1422.2000	2000
The Endophytic Symbiont-Pseudomonas aeruginosa Stimulates the Antioxidant Activity and Growth of Achyranthes aspera L.	Devi KA, Pandey G, Rawat AKS, Sharma GD, Pandey P.	Front Microbiol	10.3389/fmicb.2017.01897	2017
Microbiota dynamics and diversity at different stages of industrial processing of cocoa beans into cocoa powder.	Lima LJ, van der Velpen V, Wolkers-Rooijackers J, Kamphuis HJ, Zwietering MH, Nout MJ.	Appl Environ Microbiol	10.1128/aem.07691-11	2012
Fingerprint Analysis and Identification of Strains ST309 as a Potential High Risk Clone in a Pseudomonas aeruginosa Population Isolated from Children with Bacteremia in Mexico City.	Morales-Espinosa R, Delgado G, Espinosa LF, Isselo D, Mendez JL, Rodriguez C, Miranda G, Cravioto A.	Front Microbiol	10.3389/fmicb.2017.00313	2017
Siderophore typing, a powerful tool for the identification of fluorescent and nonfluorescent pseudomonads.	Meyer JM, Geoffroy VA, Baida N, Gardan L, Izard D, Lemanceau P, Achouak W, Palleroni NJ.	Appl Environ Microbiol	10.1128/aem.68.6.2745-2753.2002	2002
Characterization of a Novel Nicotine Degradation Gene Cluster ndp in Sphingomonas melonis TY and Its Evolutionary Analysis.	Wang H, Zhi XY, Qiu J, Shi L, Lu Z.	Front Microbiol	10.3389/fmicb.2017.00337	2017
Dispersal and survival of Flavobacterium psychrophilum phages in vivo in rainbow trout and in vitro under laboratory conditions: implications for their use in phage therapy.	Madsen L, Bertelsen SK, Dalsgaard I, Middelboe M.	Appl Environ Microbiol	10.1128/aem.00509-13	2013
A novel (S)-6-hydroxynicotine oxidase gene from Shinella sp. strain HZN7.	Qiu J, Wei Y, Ma Y, Wen R, Wen Y, Liu W.	Appl Environ Microbiol	10.1128/aem.01312-14	2014
Microbial inoculants and their impact on soil microbial communities: a review.	Trabelsi D, Mhamdi R.	Biomed Res Int	10.1155/2013/863240	2013
Phage therapy as an approach to prevent Vibrio anguillarum infections in fish larvae production.	Silva YJ, Costa L, Pereira C, Mateus C, Cunha A, Calado R, Gomes NC, Pardo MA, Hernandez I, Almeida A.	PLoS One	10.1371/journal.pone.0114197	2014
Bacteriophages with potential for inactivation of fish pathogenic bacteria: survival, host specificity and effect on bacterial community structure.	Pereira C, Silva YJ, Santos AL, Cunha A, Gomes NCM, Almeida A.	Mar Drugs	10.3390/md9112236	2011
Vibriophages and their interactions with the fish pathogen Vibrio anguillarum.	Tan D, Gram L, Middelboe M.	Appl Environ Microbiol	10.1128/aem.03544-13	2014
Protein domain architectures provide a fast, efficient and scalable alternative to sequence-based methods for comparative functional genomics.	Koehorst JJ, Saccenti E, Schaap PJ, Martins Dos Santos VAP, Suarez-Diez M.	F1000Res	10.12688/f1000research.9416.3	2016
Effects Due to Rhizospheric Soil Application of an Antagonistic Bacterial Endophyte on Native Bacterial Community and Its Survival in Soil: A Case Study with Pseudomonas aeruginosa from Banana.	Thomas P, Sekhar AC.	Front Microbiol	10.3389/fmicb.2016.00493	2016
Different Ancestries of R Tailocins in Rhizospheric Pseudomonas Isolates.	Ghequire MG, Dillen Y, Lambrichts I, Proost P, Wattiez R, De Mot R.	Genome Biol Evol	10.1093/gbe/evv184	2015
Specific Gene Loci of Clinical Pseudomonas putida Isolates.	Molina L, Udaondo Z, Duque E, Fernandez M, Bernal P, Roca A, de la Torre J, Ramos JL.	PLoS One	10.1371/journal.pone.0147478	2016
Phage therapy and photodynamic therapy: low environmental impact approaches to inactivate microorganisms in fish farming plants.	Almeida A, Cunha A, Gomes NC, Alves E, Costa L, Faustino MA.	Mar Drugs	10.3390/md7030268	2009
Population structure of Alexandrium (Dinophyceae) cyst formation-promoting bacteria in Hiroshima Bay, Japan.	Adachi M, Kanno T, Okamoto R, Itakura S, Yamaguchi M, Nishijima T.	Appl Environ Microbiol	10.1128/aem.69.11.6560-6568.2003	2003
Draft genomes of three bacteria capable of growing on cocamidopropyl betaine or N,N,N-trimethylglycine (betaine): Cupriavidus sp. CuC1, Variovorax sp. VaC1, and Pseudomonas sp. PsB.	Kim J, Han A, Chu K-H.	Microbiol Resour Announc	10.1128/mra.01269-24	2025
Unveiling six novel bacterial strains for fipronil and thiobencarb biodegradation: efficacy, metabolic pathways, and bioaugmentation potential in paddy soil.	Faridy N, Torabi E, Pourbabaee AA, Osdaghi E, Talebi K.	Front Microbiol	10.3389/fmicb.2024.1462912	2024
Conversion of lignin model compounds by Pseudomonas putida KT2440 and isolates from compost.	Ravi K, Garcia-Hidalgo J, Gorwa-Grauslund MF, Liden G.	Appl Microbiol Biotechnol	10.1007/s00253-017-8211-y	2017
Characterisation of a 3-hydroxypropionic acid-inducible system from Pseudomonas putida for orthogonal gene expression control in Escherichia coli and Cupriavidus necator.	Hanko EKR, Minton NP, Malys N.	Sci Rep	10.1038/s41598-017-01850-w	2017
High-quality draft genome sequences of Pseudomonas monteilii DSM 14164(T), Pseudomonas mosselii DSM 17497(T), Pseudomonas plecoglossicida DSM 15088(T), Pseudomonas taiwanensis DSM 21245(T) and Pseudomonas vranovensis DSM 16006(T): taxonomic considerations.	Pena A, Busquets A, Gomila M, Mulet M, Gomila RM, Garcia-Valdes E, Reddy TBK, Huntemann M, Varghese N, Ivanova N, Chen IM, Goker M, Woyke T, Klenk HP, Kyrpides N, Lalucat J	Access Microbiol	10.1099/acmi.0.000067	2019
Bactericidal Effect of Pseudomonas oryziphila sp. nov., a Novel Pseudomonas Species Against Xanthomonas oryzae Reduces Disease Severity of Bacterial Leaf Streak of Rice.	Yang R, Li S, Li Y, Yan Y, Fang Y, Zou L, Chen G.	Front Microbiol	10.3389/fmicb.2021.759536	2021
From cantaloupe to cattle: Pseudomonas alabamensis sp. nov. described from diseased cantaloupe (Cucumis melo) foliage and a bovine (Bos taurus) nasopharynx.	Fullem KR, MacLellan MP, Iriarte FB, Poudel M, Capik S, Dedonder K, Bono JL, Harhay DM, Harhay GP, Goss EM, Potnis N, Minsavage GV, Jones JB, Paret ML.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006848	2025
Pseudomonas guariconensis sp. nov., isolated from rhizospheric soil.	Toro M, Ramirez-Bahena MH, Cuesta MJ, Velazquez E, Peix A.	Int J Syst Evol Microbiol	10.1099/ijs.0.051193-0	2013
Pseudomonas palmensis sp. nov., a Novel Bacterium Isolated From Nicotiana glauca Microbiome: Draft Genome Analysis and Biological Potential for Agriculture.	Gutierrez-Albanchez E, Garcia-Villaraco A, Lucas JA, Horche I, Ramos-Solano B, Gutierrez-Manero FJ.	Front Microbiol	10.3389/fmicb.2021.672751	2021
Pseudomonas defluvii sp. nov., isolated from hospital sewage.	Qin J, Hu Y, Wu W, Feng Y, Zong Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.004272	2020
Pseudomonas sichuanensis sp. nov., isolated from hospital sewage.	Qin J, Hu Y, Feng Y, Xaioju L, Zong Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.003188	2018
Pseudomonas hunanensis sp. nov., isolated from soil subjected to long-term manganese pollution.	Gao J, Li BY, Wang HH, Liu ZQ	Curr Microbiol	10.1007/s00284-014-0545-4	2014
Pseudomonas plecoglossicida sp. nov., the causative agent of bacterial haemorrhagic ascites of ayu, Plecoglossus altivelis.	Nishimori E, Kita-Tsukamoto K, Wakabayashi H	Int J Syst Evol Microbiol	10.1099/00207713-50-1-83	2000

References

#5701	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15088
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41751	; Curators of the CIP;
#58634	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49623
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121868	Collection of Institut Pasteur ; Curators of the CIP; CIP 106493
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas plecoglossicida (CCUG 49623, CIP 106493, DSM 15088)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

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API 20NE

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Genome browser: GCA_000688275

16S sequences

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