Pseudochelatococcus lubricantis (DSM 28761, CCM 8528, CIP 110802)

Name: Pseudochelatococcus lubricantis (DSM 28761, CCM 8528, CIP 110802)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130810

Type strain

Culture col. no. DSM 28761 CCM 8528 CIP 110802 LMG 28286 MPA 1113 1 more

NCBI tax ID(s) 1538102

Special Collections DSMZ CIP CCUG

History DSMZ <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany; MPA 1113 <- J. Kuever, Bremen Institute for Materials Testing CIP <- 2014, P. Kämpfer, Giessen, Univ., Giessen, Germany: strain MPA 1113

Links

Pseudochelatococcus lubricantis DSM 28761 is a Gram-negative, coccus-shaped bacterium that was isolated from coolant .

Gram-negative coccus-shaped genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 398551

LMG 28286,DSM 28761,CIP 110802

@ref 20215

Last LPSN update 2026-05-29 08:37:28

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Chelatococcaceae

Genus Pseudochelatococcus

Species Pseudochelatococcus lubricantis

Full scientific name Pseudochelatococcus lubricantis Kämpfer et al. 2015

Synonyms (1)

Qingshengfania soli

BacDive ID	Other strains from **Pseudochelatococcus lubricantis** (1)	Type strain
132295	P. lubricantis LR4, DSM 103870, CCTCC AB 2015036, KCTC 42463

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
125439	negative			92.788
120660	negative	coccus-shaped

Multimedia

@ref:	22135
multimedia content:	DSM_28761.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_28761.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22135	REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b)		Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) Composition: Trypticase soy broth 30.0 g/l Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l K2HPO4 2.5 g/l D(+)-Glucose 2.5 g/l Distilled water
120660	CIP Medium 72		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
22135	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.109

Spore formation

@ref	Spore formation	Confidence
125439		99.32

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Contamination	#Heavy metal
#Engineered	#Industrial	#Industrial production

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
22135	coolant (metal working emulsion)	Northern Germany	Germany	DEU	Europe
120660	Coolant lubricant		Germany	DEU	Europe	2012

Taxonmaps

69479

Global distribution of 16S sequence KJ886939 (>99% sequence identity) for Pseudochelatococcus lubricantis subclade from Microbeatlas

Aquatic Samples	66
Soil Samples	30
Animal Samples	44
Plant Samples	3
Total Samples	143

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22135	1	Risk group (German classification)
120660	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4243249v1 assembly for Pseudochelatococcus lubricantis CCM 8528	scaffold	GCA_042432495	1538102	71.51

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22135	Pseudochelatococcus lubricantis strain MPA 1113 16S ribosomal RNA gene, partial sequence	KJ886939	1406		1538102
124043	Pseudochelatococcus lubricantis strain CCM 8528 16S ribosomal RNA gene, partial sequence.	MT760215	1321		1538102

GC content

@ref	GC-content (mol%)	Method
22135	58.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4243249v1 assembly for Pseudochelatococcus lubricantis CCM 8528
NCBI: GCA_042432495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.11	no
125439	motility	BacteriaNetⓘ	yes	60.04	no
125439	gram_stain	BacteriaNetⓘ	negative	92.79	no
125439	spore_formation	BacteriaNetⓘ	no	99.32	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Qingshengfania soli Zhang et al. 2015 is a later heterotypic synonym of Pseudochelatococcus lubricantis Kampfer et al. 2015.	Kampfer P, Glaeser SP, Graber M, Rabenstein A, Kuever J	Int J Syst Evol Microbiol	10.1099/ijsem.0.002817	2018
Phylogeny	Pseudochelatococcus lubricantis gen. nov., sp. nov. and Pseudochelatococcus contaminans sp. nov. from coolant lubricants.	Kampfer P, Glaeser SP, Graber M, Rabenstein A, Kuever J, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.067652-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22135	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28761
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120660	Collection of Institut Pasteur ; Curators of the CIP; CIP 110802
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudochelatococcus lubricantis (DSM 28761, CCM 8528, CIP 110802)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042432495

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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