Aminobacterium thunnarium (DSM 27500, JCM 19320, OTA 102)

Name: Aminobacterium thunnarium (DSM 27500, JCM 19320, OTA 102)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130807

Type strain

Culture col. no. DSM 27500 JCM 19320 OTA 102

NCBI tax ID(s) 1482737

Special Collections DSMZ JCM

History DSMZ <- M. L. Fardeau, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; OTA 102 <- O. Hamdi {2013} JCM <-- M.-L. Fardeau; IRD-MIO, Aix-Marseille Univ., France; OTA 102.

Links

Aminobacterium thunnarium DSM 27500 is an anaerobe bacterium that was isolated from sludge from anaerobic sequencing batch reactor treating wastewater from cooking tuna.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 404985

JCM 19320,DSM 27500

@ref 20215

Last LPSN update 2026-05-29 08:37:28

Domain Bacteria

Phylum Synergistota

Class Synergistia

Order Synergistales

Family Synergistaceae

Genus Aminobacterium

Species Aminobacterium thunnarium

Full scientific name Aminobacterium thunnarium Hamdi et al. 2015

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21471	AMINOBACTERIUM MEDIUM (DSMZ Medium 846a)		Medium recipe at MediaDive	Name: AMINOBACTERIUM MEDIUM (DSMZ Medium 846a) Composition: NaCl 19.9402 g/l MgCl2 x 6 H2O 2.99103 g/l Yeast extract 1.99402 g/l Na2CO3 1.49551 g/l L-Serine 1.04686 g/l L-Cysteine HCl x H2O 0.498504 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.498504 g/l NH4Cl 0.299103 g/l KH2PO4 0.299103 g/l K2HPO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Riboflavin 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21471	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

21471

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Bioreactor	-
#Engineered	#Waste	#Wastewater
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
21471	sludge from anaerobic sequencing batch reactor treating wastewater from cooking tuna	Tunisia	TUN	Africa
67770	Anaerobic sequencing batch reactor treating wastewater from cooking tuna

Taxonmaps

69479

Global distribution of 16S sequence KJ159211 (>99% sequence identity) for Aminobacterium thunnarium subclade from Microbeatlas

Aquatic Samples	1298
Soil Samples	532
Animal Samples	504
Plant Samples	93
Total Samples	2427

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21471	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21471	Aminobacterium thunnarium strain OTA 102 16S ribosomal RNA gene, partial sequence	KJ159211	1539		1482737

GC content

@ref	GC-content (mol%)	Method
21471	41.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.	Hamdi O, Ben Hania W, Postec A, Bouallagui H, Hamdi M, Bonin P, Ollivier B, Fardeau ML	Int J Syst Evol Microbiol	10.1099/ijs.0.068965-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21471	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27500
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Aminobacterium thunnarium (DSM 27500, JCM 19320, OTA 102)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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