Pseudomonas nitroreducens (DSM 14399, ATCC 33634, IAM 1439)

Name: Pseudomonas nitroreducens (DSM 14399, ATCC 33634, IAM 1439)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13080

Type strain

Strain Designation KS 0050, P-6

Culture col. no. DSM 14399 ATCC 33634 IAM 1439 JCM 2782 CCUG 12538 9 more

NCBI tax ID(s) 1215112 46680

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- JCM <- K. Komagata; KS 0050 <- AJ <- IAM <- H. Iizuka and K. Komagata; P-6 JCM <-- K. Komagata KS 0050 <-- AJ 2282 <-- IAM 1439 <-- H. Iizuka and K. Komagata P-6. CIP <- 2000, IAM <- S. Ikemoto: strain AJ 2282

Links

Pseudomonas nitroreducens KS 0050 is an aerobe, Gram-negative, motile bacterium that was isolated from oil-brine.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46760

ATCC 33634,IAM 1439,CCUG 12538,CIP 106747,IFO 12694,JCM 2782,DSM 14399,NCIMB 13640,LMG 21614,AS 1.1796,NBRC 12694,BCRC 11041,CCRC 11041,KCTC 12325,CGMCC 1.1796,VTT E-012028

@ref 20215

Last LPSN update 2026-05-29 08:27:57

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas nitroreducens

Full scientific name Pseudomonas nitroreducens Iizuka and Komagata 1964 (Approved Lists 1980)

Synonyms (2)

Pseudomonas nitritireducens
Pseudomonas multiresinivorans

BacDive ID	Other strains from **Pseudomonas nitroreducens** (9)	Type strain
13076	P. nitroreducens 926, DSM 1650, ATCC 13867, CIP 104375, DSM ...
13077	P. nitroreducens HBP1, CCUG 54620, DSM 8897
13078	P. nitroreducens HBP1 Prp, DSM 8899
13079	P. nitroreducens DSM 9128, ATCC 27162, CCUG 54930, CIP 109591
13081	P. nitroreducens IpA-1, CCUG 51655, DSM 17553, ATCC 700690, ...
13082	P. nitroreducens TA12-C, DSM 23662
146190	P. nitroreducens CCUG 30561
153626	P. nitroreducens CCUG 50378 A
162957	P. nitroreducens JCM 20557, IAM 12407

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121316	negative	rod-shaped
125439	negative		94.18
125438	negative		98.985

Pigmentation

@ref	Production	Name
121316		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5336	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
40575	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121316	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5336	positive	growth	28
40575	positive	growth	25
45737	positive	growth	22-42
67770	positive	growth	30
121316	positive	growth	5-37
121316	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
45737	aerobe
121316	obligate aerobe
125439	obligate aerobe	93.788

Spore formation

@ref	Spore formation	Confidence
125439		98.841

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121316	NaCl	positive	growth	0-8 %
121316	NaCl		growth	10 %

Observation

67770

Observationquinones: Q-9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
121316	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
121316	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
121316	17632 ChEBI	nitrate	+	reduction
121316	17632 ChEBI	nitrate	+	respiration
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
121316	16301 ChEBI	nitrite	+	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121316	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
121316	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121316	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121316	amylase	-
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
121316	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121316	caseinase	-	3.4.21.50
121316	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
121316	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121316	gelatinase	-
68369	gelatinase	-		from API 20NE
121316	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
121316	lipase	-
68382	lipase (C 14)	+		from API zym
121316	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121316	ornithine decarboxylase	-	4.1.1.17
121316	oxidase	+
121316	protease	-
68382	trypsin	+	3.4.21.4	from API zym
121316	tryptophan deaminase	-
121316	tween esterase	-
121316	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121316	-	+	+	+	+	+	+	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
5336	+	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	+	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121316	not determinedn.d.	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	-	-	-	-	+	+	+	+	+	-	-	+	-	-	-	+	+	+	+	+	+	+	-	+	+	+	-	+	+	+	-	+	+	+	+	+	+	+	-	-	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Oil reservoir
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5336	oil-brine		Japan	JPN	Asia
45737	Oil brine	Tokyo	Japan	JPN	Asia
67770	Oil brine		Japan	JPN	Asia
121316	Oil brine		Japan	JPN	Asia	1957

Taxonmaps

69479

Global distribution of 16S sequence AM088474 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	2237
Soil Samples	862
Animal Samples	2039
Plant Samples	598
Total Samples	5736

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5336	1	Risk group (German classification) According to TRBA 466
121316	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2671180175 annotated assembly for Pseudomonas nitroreducens LMG 21614	scaffold	GCA_900188285	46680.17	2671180175	46680	71.66
67770	ASM1298624v1 assembly for Pseudomonas nitroreducens DSM 14399	contig	GCA_012986245	46680.53	8110705948	46680	68.66
67770	ASM209175v1 assembly for Pseudomonas nitroreducens NBRC 12694	contig	GCA_002091755	1215112.3	2969223408	1215112	67.55

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas nitroreducens partial 16S rRNA gene, type strain IAM 1439	AM088473	1523	46680
20218	Pseudomonas nitroreducens 16S rRNA gene	D84021	1370	46680
20218	Pseudomonas nitroreducens gene for 16S rRNA, partial sequence, strain: NBRC 12694	AB680323	1462	46680
5336	Pseudomonas nitroreducens partial 16S rRNA gene, type strain: DSM 14399	AM088474	1521	46680
124043	Pseudomonas nitroreducens strain IAM 1439 16S ribosomal RNA gene, partial sequence.	KU925860	1486	46680

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2671180175 annotated assembly for Pseudomonas nitroreducens LMG 21614
BV-BRC: 46680.17

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.79	no
125439	gram_stain	BacteriaNetⓘ	negative	94.18	no
125439	spore_formation	BacteriaNetⓘ	no	98.84	no
125439	motility	BacteriaNetⓘ	yes	89.49	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas nitroreducens NBRC 12694 strain NBRC 12694
PATRIC: 1215112.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.99	no
125438	anaerobic	anaerobicⓘ	no	96.87	yes
125438	spore-forming	spore-formingⓘ	no	85.03	no
125438	aerobic	aerobicⓘ	yes	87.72	yes
125438	thermophilic	thermophileⓘ	no	99.49	yes
125438	flagellated	motile2+ⓘ	yes	87.99	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	The Impact of Anti-Inflammatory Drugs on the Prokaryotic Community Composition and Selected Bacterial Strains Based on Microcosm Experiments.	Farkas R, Mireisz T, Toumi M, Abbaszade G, Sztrada N, Toth E.	Microorganisms	10.3390/microorganisms11061447	2023
	Bacterial Gamma-Glutamyl Transpeptidase, an Emerging Biocatalyst: Insights Into Structure-Function Relationship and Its Biotechnological Applications.	Saini M, Kashyap A, Bindal S, Saini K, Gupta R.	Front Microbiol	10.3389/fmicb.2021.641251	2021
	First report of Pseudomonas nitroreducens cultured from the lungs of a patient with pneumonia.	Turner TL, Wunderink R, Ozer E, Hauser A.	BMJ Case Rep	10.1136/bcr-2020-241327	2021
Metabolism	Enrichment and characterization of a bacterial culture that can degrade 4-aminopyridine.	Takenaka S, Nomura R, Minegishi A, Yoshida K.	BMC Microbiol	10.1186/1471-2180-13-62	2013
	Bactericidal Effect of Entomopathogenic Bacterium Pseudomonas entomophila Against Xanthomonas citri Reduces Citrus Canker Disease Severity.	Villamizar S, Ferro JA, Caicedo JC, Alves LMC.	Front Microbiol	10.3389/fmicb.2020.01431	2020
Phylogeny	New PCR-based open reading frame typing method for easy, rapid, and reliable identification of Acinetobacter baumannii international epidemic clones without performing multilocus sequence typing.	Suzuki M, Hosoba E, Matsui M, Arakawa Y.	J Clin Microbiol	10.1128/jcm.01064-14	2014
	Plant growth-promotion triggered by extracellular polymer is associated with facilitation of bacterial cross-feeding networks of the rhizosphere.	Gu Y, Yan W, Chen Y, Liu S, Sun L, Zhang Z, Lei P, Wang R, Li S, Banerjee S, Friman VP, Xu H.	ISME J	10.1093/ismejo/wraf040	2025
Genetics	Comparative Genomic Analysis of Three Pseudomonas Species Isolated from the Eastern Oyster (Crassostrea virginica) Tissues, Mantle Fluid, and the Overlying Estuarine Water Column.	Pathak A, Stothard P, Chauhan A.	Microorganisms	10.3390/microorganisms9030490	2021
	Bioremediation of tetracycline antibiotics-contaminated soil by bioaugmentation.	Hong X, Zhao Y, Zhuang R, Liu J, Guo G, Chen J, Yao Y.	RSC Adv	10.1039/d0ra04705h	2020
Genetics	Whole genome sequencing and phylogenomic analyses of a novel glufosinate-tolerant Pseudomonas species.	Wee WY, Chew XY, Taheri S, Tan XL, Teo CH	3 Biotech	10.1007/s13205-022-03185-4	2022
Metabolism	Crystal structure analysis and enzymatic characterization of gamma-glutamyltranspeptidase from Pseudomonas nitroreducens.	Hibi T, Imaoka M, Shimizu Y, Itoh T, Wakayama M	Biosci Biotechnol Biochem	10.1080/09168451.2018.1547104	2018
Metabolism	Pyrimidine nucleotide synthesis in Pseudomonas nitroreducens and the regulatory role of pyrimidines.	West TP	Microbiol Res	10.1016/j.micres.2014.04.003	2014
Enzymology	Molecular cloning and characterization of gamma-glutamyltranspeptidase from Pseudomonas nitroreducens IFO12694.	Imaoka M, Yano S, Okumura M, Hibi T, Wakayama M	Biosci Biotechnol Biochem	10.1271/bbb.100199	2010
	gamma-Glutamyl Transfer Reactions by Glutaminase from Pseudomonas nitroreducens IFO 12694 and Their Application for the Syntheses of Theanine and gamma-Glutamylmethylamide.	Tachiki T, Yamada T, Mizuno K, Ueda M, Shiode J, Fukami H	Biosci Biotechnol Biochem	10.1271/bbb.62.1279	1998
Enzymology	Purification and Some Properties of Glutaminase from Pseudomonas nitroreducens IFO 12694.	Takashi T, Takeshi Y, Masashi U, Yasuki N, Nobuo I, Yu-Ichi H, Ju-Ichi S	Biosci Biotechnol Biochem	10.1271/bbb.60.1160	1996
Enzymology	Comamonas resistens sp. nov. and Pseudomonas triclosanedens sp. nov., two members of the phylum Pseudomonadota isolated from the wastewater treatment system of a pharmaceutical factory.	Yin Y, Han J, Wu H, Lu Y, Bao X, Lu Z.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006222	2024
Phylogeny	Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.	Romanenko LA, Tanaka N, Svetashev VI, Falsen E.	Int J Syst Evol Microbiol	10.1099/ijs.0.036863-0	2013
Phylogeny	Pseudomonas nicosulfuronedens sp. nov., a nicosulfuron degrading bacterium, isolated from a microbial consortium.	Li M, Ma Q, Kong D, Han X, Che J, Zhou Y, Jiang X, Ruan Z, Zhang Q	Int J Syst Evol Microbiol	10.1099/ijsem.0.004632	2021
Phylogeny	Pseudomonas nitritireducens sp. nov., a nitrite reduction bacterium isolated from wheat soil.	Wang YN, He WH, He H, Du X, Jia B, Zeng ZP, An ML, Chen GC	Arch Microbiol	10.1007/s00203-012-0838-6	2012
Phylogeny	Pseudomonas panipatensis sp. nov., isolated from an oil-contaminated site.	Gupta SK, Kumari R, Prakash O, Lal R	Int J Syst Evol Microbiol	10.1099/ijs.0.65401-0	2008
Phylogeny	Pseudomonas knackmussii sp. nov.	Stolz A, Busse HJ, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.64761-0	2007
Phylogeny	Pseudomonas delhiensis sp. nov., from a fly ash dumping site of a thermal power plant.	Prakash O, Kumari K, Lal R	Int J Syst Evol Microbiol	10.1099/ijs.0.64456-0	2007
Phylogeny	Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea.	Kwon SW, Kim JS, Park IC, Yoon SH, Park DH, Lim CK, Go SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.02326-0	2003

References

#5336	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14399
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40575	; Curators of the CIP;
#45737	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12538
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121316	Collection of Institut Pasteur ; Curators of the CIP; CIP 106747
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Pseudomonas nitroreducens (DSM 14399, ATCC 33634, IAM 1439)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900188285

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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