Name: Lederbergia graminis YC6957
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1308

Type strain:

Species: Lederbergia graminis

Strain Designation: YC6957

Culture col. no.: DSM 22162, KACC 13779

Strain history: <- Y. R. Chung, Gyeongsang Natl. Univ. (GNU), Jinju, Korea; YC6957 <- F. Bibi

NCBI tax ID(s): 735518 (species)

SI-ID 399384

DSM 22162

Section

Lederbergia graminis YC6957 is a mesophilic bacterium that was isolated from internal tissue of roots of Elymus mollis , a coastal sand-dune plant.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Lederbergia*
	Species	**Lederbergia graminis**
	Full Scientific Name (LPSN)	Lederbergia graminis (Bibi et al. 2011) Gupta et al. 2020

Synonym

Bacillus graminis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16194]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #16194]

Culture medium growth

[Ref.: #16194]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16194]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16194]			growth	30 °C

[Ref.: #16194]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16194]	Sample type/isolated from	internal tissue of roots of Elymus mollis (Trin.), a coastal sand-dune plant
[Ref.: #16194]	Host species	Elymus mollis
[Ref.: #16194]	Geographic location (country and/or sea, region)	Namhae Island (34° 50' 15.62'' N 127° 53' 32.72'' E)
[Ref.: #16194]	Country	Republic of Korea
[Ref.: #16194]	Country ISO 3 Code	KOR
[Ref.: #16194]	Continent	Asia
[Ref.: #16194]	Geographic location	34.7252°/127.8950°
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16194]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16194]	Bacillus graminis strain YC6957 16S ribosomal RNA gene, partial sequence	GU322908	1422	ENA	735518 tax ID

[Ref.: #16194]

GC-content

41.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #16194]

Culture collection no.

DSM 22162, KACC 13779

[Ref.: #70959]

SI-ID 399384

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus panacisoli sp. nov., isolated from ginseng soil.	Choi JH, Cha CJ	Int J Syst Evol Microbiol	10.1099/ijs.0.054320-0	2013	*
Phylogeny	Bacillus graminis sp. nov., an endophyte isolated from a coastal dune plant.	Bibi F, Chung EJ, Jeon CO, Chung YR	Int J Syst Evol Microbiol	10.1099/ijs.0.023820-0	2010	*

References

#16194

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22162

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#70959

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399384.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Lederbergia graminis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF