Lederbergia graminis (DSM 22162, KACC 13779, YC6957)

Name: Lederbergia graminis (DSM 22162, KACC 13779, YC6957)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1308

Type strain

Strain Designation YC6957

Culture col. no. DSM 22162 KACC 13779 YC6957

NCBI tax ID(s) 735518

Special Collections DSMZ

History <- Y. R. Chung, Gyeongsang Natl. Univ. (GNU), Jinju, Korea; YC6957 <- F. Bibi

Links

Lederbergia graminis YC6957 is a bacterium that was isolated from internal tissue of roots of Elymus mollis , a coastal sand-dune plant.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 399384

DSM 22162

@ref 20215

Last LPSN update 2026-02-09 11:18:04

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Lederbergia

Species Lederbergia graminis

Full scientific name Lederbergia graminis (Bibi et al. 2011) Gupta et al. 2020

Synonyms (1)

Bacillus graminis

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16194	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l MnSO4 0.01 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
16194	positive	growth	30

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
16194	internal tissue of roots of Elymus mollis (Trin.), a coastal sand-dune plant	Elymus mollis	Namhae Island (34° 50' 15.62'' N 127° 53' 32.72'' E)	Republic of Korea	KOR	Asia	34.7252	127.895 34.7252/127.895

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16194	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265548v1 assembly for Lederbergia graminis KACC 13779	contig	GCA_042655485	735518	67.19

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16194	Bacillus graminis strain YC6957 16S ribosomal RNA gene, partial sequence	GU322908	1422		735518

GC content

@ref	GC-content (mol%)	Method
16194	41.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus panacisoli sp. nov., isolated from ginseng soil.	Choi JH, Cha CJ	Int J Syst Evol Microbiol	10.1099/ijs.0.054320-0	2013
Phylogeny	Bacillus graminis sp. nov., an endophyte isolated from a coastal dune plant.	Bibi F, Chung EJ, Jeon CO, Chung YR	Int J Syst Evol Microbiol	10.1099/ijs.0.023820-0	2010

References

#16194	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22162
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lederbergia graminis (DSM 22162, KACC 13779, YC6957)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042655485

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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