Luteimonas vadosa (DSM 29392, JCM 18392, NRIC 0881)

Name: Luteimonas vadosa (DSM 29392, JCM 18392, NRIC 0881)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130771

Type strain

Culture col. no. DSM 29392 JCM 18392 NRIC 0881 KMM 9005

NCBI tax ID(s) 1165507

Special Collections DSMZ JCM Literature strains

Links

Luteimonas vadosa DSM 29392 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from seashore sediment.

Gram-negative rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401755

JCM 18392,DSM 29392

@ref 20215

Last LPSN update 2025-12-16 10:01:05

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Lysobacterales

Family Lysobacteraceae

Genus Luteimonas

Species Luteimonas vadosa

Full scientific name Luteimonas vadosa Romanenko et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30732	negative	2.35 µm	0.45 µm	rod-shaped

Pigmentation

30732

Productionyes

Multimedia

@ref:	21638
multimedia content:	DSM_29392.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_29392.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21638	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
21638	positive	growth	28	mesophilic
30732	positive	growth	05-39
30732	positive	optimum	35	mesophilic
67770	positive	growth	35	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
30732	positive	optimum	7.5
30732	positive	growth	06-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

30732

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30732	NaCl	positive	growth	0-4 %
30732	NaCl	positive	optimum	0.75 %

Observation

@ref	Observation
30732	aggregates in clumps
67770	quinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30732	4853 ChEBI	esculin	+	hydrolysis
30732	29864 ChEBI	mannitol	+	carbon source
30732	30911 ChEBI	sorbitol	+	carbon source
30732	17992 ChEBI	sucrose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30732	acid phosphatase	+	3.1.3.2
30732	alkaline phosphatase	+	3.1.3.1
30732	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Coast
#Environmental	#Terrestrial	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
21638	seashore sediment	Sea of Japan	Russia	RUS	Asia	42.6967	131.473 42.6967/131.473
67770	Sandy sediment from the Sea of Japan seashore		Russia	RUS

Taxonmaps

69479

Global distribution of 16S sequence AB704915 (>99% sequence identity) for Lysobacter from Microbeatlas

Aquatic Samples	87
Soil Samples	1069
Animal Samples	105
Plant Samples	226
Total Samples	1487

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21638	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954354v1 assembly for Luteimonas vadosa JCM 18392	contig	GCA_039543545	1165507	47.68

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21638	Luteimonas vadosa gene for 16S ribosomal RNA, partial sequence	AB704915	1515		1165507

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteimonas vadosa sp. nov., isolated from seashore sediment.	Romanenko LA, Tanaka N, Svetashev VI, Kurilenko VV, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/ijs.0.043273-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21638	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29392
#30732	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27063 (see below)
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Luteimonas vadosa (DSM 29392, JCM 18392, NRIC 0881)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039543545

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media