Name: Luteimonas vadosa DSM 29392
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130771

Type strain:

Species: Luteimonas vadosa

Culture col. no.: DSM 29392, JCM 18392, NRIC 0881, KMM 9005

Strain history: N. Tanaka Sd3-5.

NCBI tax ID(s): 1165507 (species)

SI-ID 401755

DSM 29392

Section

Luteimonas vadosa DSM 29392 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from seashore sediment.

Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Luteimonas*
	Species	**Luteimonas vadosa**
	Full Scientific Name (LPSN)	Luteimonas vadosa Romanenko et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30732]	Gram stain	negative

[Ref.: #30732]	Cell length	2.35 µm

[Ref.: #30732]	Cell width	0.45 µm

[Ref.: #30732]	Cell shape	rod-shaped

[Ref.: #30732]	Motility	no

[Ref.: #30732]

Pigment production

yes

Multimedia content

[Ref.: #21638]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21638]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #21638]

Culture medium growth

[Ref.: #21638]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21638]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #21638]	growth	28 °C
[Ref.: #30732]	growth	05-39 °C
[Ref.: #30732]	optimum	35 °C
[Ref.: #67770]	growth	35 °C

[Ref.: #21638]	Temperature range	mesophilic
[Ref.: #30732]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30732]			optimum	7.5
[Ref.: #30732]			growth	06-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30732]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30732]		NaCl		growth	0-4	%
[Ref.: #30732]		NaCl		optimum	0.75	%

[Ref.: #30732]	Observation	aggregates in clumps
[Ref.: #67770]	Observation	quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30732]	esculin ChEBI	+	hydrolysis
[Ref.: #30732]	mannitol ChEBI	+	carbon source
[Ref.: #30732]	sorbitol ChEBI	+	carbon source
[Ref.: #30732]	sucrose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30732]	acid phosphatase	+	3.1.3.2
[Ref.: #30732]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30732]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21638]	Sample type/isolated from	seashore sediment
[Ref.: #21638]	Geographic location (country and/or sea, region)	Sea of Japan
[Ref.: #21638]	Country	Russia
[Ref.: #21638]	Country ISO 3 Code	RUS
[Ref.: #21638]	Continent	Asia
[Ref.: #21638]	Geographic location	42.6967°/131.4730°

[Ref.: #67770]	Sample type/isolated from	Sandy sediment from the Sea of Japan seashore
[Ref.: #67770]	Country	Russia
[Ref.: #67770]	Country ISO 3 Code	RUS
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Coast
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB704915 (>99% sequence identity) for Lysobacter from Microbeatlas

Aquatic Samples	87
Soil Samples	1069
Animal Samples	105
Plant Samples	226
Total Samples	1487

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21638]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21638]	Luteimonas vadosa gene for 16S ribosomal RNA, partial sequence	AB704915	1515	ENA	1165507 tax ID

Availability in culture collections External links

[Ref.: #21638]

Culture collection no.

DSM 29392, JCM 18392, NRIC 0881, KMM 9005

[Ref.: #89268]

SI-ID 401755

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteimonas vadosa sp. nov., isolated from seashore sediment.	Romanenko LA, Tanaka N, Svetashev VI, Kurilenko VV, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/ijs.0.043273-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21638

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29392

#30732

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27063 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89268

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401755.1 )

#27063

IJSEM 1261 2013 ( DOI 10.1099/ijs.0.043273-0 , PubMed 22771684 )

* These data were automatically processed and therefore are not curated

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