Name: Streptosporangium sonchi NEAU-QS7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130733

Type strain:

Species: Streptosporangium sonchi

Strain Designation: NEAU-QS7

Culture col. no.: DSM 46717, CGMCC 4.7142

Strain history: <- C. Liu, School of Life Science, Harbin,China; NEAU-QS7 <- Z. Ma, School of Life Science, Harbin

NCBI tax ID(s): 1434731 (species)

Section

Streptosporangium sonchi NEAU-QS7 is a mesophilic bacterium that was isolated from root of Sonchus oleraceus.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Streptosporangium*
	Species	"Streptosporangium sonchi"
	Full Scientific Name (LPSN)	Streptosporangium sonchi Ma et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69465]	Colony color	Black red (3007)
[Ref.: #69465]	Cultivation medium used	ISP 2

[Ref.: #69465]	Colony color	Black red (3007)
[Ref.: #69465]	Cultivation medium used	ISP 3

[Ref.: #69465]	Colony color	Black red (3007)
[Ref.: #69465]	Cultivation medium used	ISP 4

[Ref.: #69465]	Colony color	Black red (3007)
[Ref.: #69465]	Cultivation medium used	ISP 7

[Ref.: #69465]	Colony color	Black red (3007)
[Ref.: #69465]	Cultivation medium used	suter without tyrosine

[Ref.: #69465]	Colony color	Grey brown (8019)
[Ref.: #69465]	Cultivation medium used	suter with tyrosine

[Ref.: #69465]	Colony color	Olive brown (8008)
[Ref.: #69465]	Cultivation medium used	ISP 6

[Ref.: #69465]	Colony color	Purple red (3004)
[Ref.: #69465]	Cultivation medium used	ISP 5

[Ref.: #69465]	Pigment production	no
[Ref.: #69465]	Pigment name	Melanin
[Ref.: #69465]	Pigment production	yes
[Ref.: #69465]	Pigmentation color	Ruby red (3003), sand yellow (1002), beige red (3012), red violet (4002), purple red (3004)
[Ref.: #69465]	Pigment name	soluble pigment

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 2

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 3

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 4

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 5

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 6

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	ISP 7

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69465]	Multicellular complex forming ability	no
[Ref.: #69465]	Multicellular complex name	Aerial mycelium
[Ref.: #69465]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #21822]

Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21822]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #21822]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #21822]

Culture medium composition

expand / minimize

[Ref.: #21822]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #21822]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #21822]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21822]			growth	28 °C

[Ref.: #21822]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69465]		NaCl		growth	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69465]	arabinose ChEBI	+	growth
[Ref.: #69465]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69465]	fructose ChEBI	+/-	growth
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69465]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69465]	inositol ChEBI	-	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69465]	mannose ChEBI	+/-	growth
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #69465]	raffinose ChEBI	+/-	growth
[Ref.: #69465]	rhamnose ChEBI	+/-	growth
[Ref.: #69465]	sucrose ChEBI	+/-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69465]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API Coryne, API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69465]	3958	-	-	-	+	-	-	+	+	+	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69465]	6142	not determinedn.d.	+	+	+/-	-	+	+	+/-	+	+	+	+/-	-	-	-	+	+/-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21822]	Sample type/isolated from	root of Sonchus oleraceus
[Ref.: #21822]	Geographic location (country and/or sea, region)	Heilongjiang Province, Harbin
[Ref.: #21822]	Country	China
[Ref.: #21822]	Country ISO 3 Code	CHN
[Ref.: #21822]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF928747 (>99% sequence identity) for Streptosporangium from Microbeatlas

Aquatic Samples
Soil Samples	14
Animal Samples	1
Plant Samples	2
Total Samples	17

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21822]	Streptosporangium sonchi strain NEAU-QS7 16S ribosomal RNA gene, partial sequence	KF928747	1518	ENA	1434731 tax ID

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GC-content

69.5 mol%

Availability in culture collections External links

[Ref.: #21822]

Culture collection no.

DSM 46717, CGMCC 4.7142

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptosporangium jiaoheense sp. nov. and Streptosporangium taraxaci sp. nov., actinobacteria isolated from soil and dandelion root (Taraxacum mongolicum Hand.-Mazz.).	Zhao J, Guo L, Li Z, Piao C, Li Y, Li J, Liu C, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.001040	2016	*
Phylogeny	Streptosporangium sonchi sp. nov. and Streptosporangium kronopolitis sp. nov., two novel actinobacteria isolated from a root of common sowthistle (Sonchus oleraceus L.) and a millipede (Kronopolites svenhedind Verhoeff).	Ma Z, Liu H, Liu C, He H, Zhao J, Wang X, Li J, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-015-0443-1	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21822

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46717

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69465

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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