Name: Streptomyces seymenliensis B1041
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130724

Type strain:

Species: Streptomyces seymenliensis

Strain Designation: B1041

Culture col. no.: DSM 42117, KCTC 29245

Strain history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; B1041 <- D. Tatar, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey

NCBI tax ID(s): 1302728 (species)

SI-ID 396749

DSM 42117

Section

Streptomyces seymenliensis B1041 is a mesophilic bacterium that was isolated from soil from a salt lake.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces seymenliensis**
	Full Scientific Name (LPSN)	Streptomyces seymenliensis Tatar and Sahin 2015

Information on morphological and physiological properties Morphology

[Ref.: #69345]	Colony color	Beige (1001), olive brown (8008)
[Ref.: #69345]	Cultivation medium used	ISP 4

[Ref.: #69345]	Colony color	Beige (1001), light ivory (1015), olive brown (8008)
[Ref.: #69345]	Cultivation medium used	ISP 2

[Ref.: #69345]	Colony color	Ivory (1014), khaki grey (7008)
[Ref.: #69345]	Cultivation medium used	suter with tyrosine

[Ref.: #69345]	Colony color	Olive brown (8008)
[Ref.: #69345]	Cultivation medium used	ISP 6

[Ref.: #69345]	Colony color	Olive brown (8008)
[Ref.: #69345]	Cultivation medium used	suter without tyrosine

[Ref.: #69345]	Colony color	Olive brown (8008), sepia brown (8014)
[Ref.: #69345]	Cultivation medium used	ISP 7

[Ref.: #69345]	Colony color	Sand yellow (1002), beige brown (8024)
[Ref.: #69345]	Cultivation medium used	ISP 5

[Ref.: #69345]	Colony color	Signal yellow (1003), green brown (8000)
[Ref.: #69345]	Cultivation medium used	ISP 3

[Ref.: #69345]	Pigment production	yes
[Ref.: #69345]	Pigment name	Melanin
[Ref.: #69345]	Pigment production	yes
[Ref.: #69345]	Pigmentation color	Sand yellow (1002), beige (1001), grey beige (1019), brown beige (1011)
[Ref.: #69345]	Pigment name	soluble pigment

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 2

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 3

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 4

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 5

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 6

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	ISP 7

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69345]	Multicellular complex forming ability	no
[Ref.: #69345]	Multicellular complex name	Aerial mycelium
[Ref.: #69345]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #21957]

Caption:

Medium 65 28°C

[Ref.: #21957]

Intellectual property rights:

[Ref.: #69345]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69345]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69345]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69345]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21957]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #21957]

Culture medium growth

[Ref.: #21957]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21957]

Culture medium composition

expand / minimize

[Ref.: #21957]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #21957]

Culture medium growth

[Ref.: #21957]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21957]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21957]			growth	28 °C

[Ref.: #21957]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69345]		NaCl		growth	0-5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69345]	arabinose ChEBI	+	growth
[Ref.: #69345]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69345]	fructose ChEBI	+	growth
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69345]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69345]	inositol ChEBI	+	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69345]	mannose ChEBI	+	growth
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #69345]	raffinose ChEBI	+/-	growth
[Ref.: #69345]	rhamnose ChEBI	+	growth
[Ref.: #69345]	sucrose ChEBI	+	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69345]	xylose ChEBI	+/-	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69345]	3838	-	-	-	+	-	+	+	+	-	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69345]	6022	not determinedn.d.	+	+/-	+/-	-	+	+/-	+/-	-	-	+	+	+/-	+	-	+/-	+/-	+	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21957]	Sample type/isolated from	soil from a salt lake
[Ref.: #21957]	Geographic location (country and/or sea, region)	Ankara, Tuz Lake, Seymenli village
[Ref.: #21957]	Country	Turkey
[Ref.: #21957]	Country ISO 3 Code	TUR
[Ref.: #21957]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21957]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21957]	Streptomyces seymenliensis strain B1041 16S ribosomal RNA gene, partial sequence	KC560729	1480	ENA	1302728 tax ID

[Ref.: #21957]

GC-content

70.4 mol%

fluorimetric

Availability in culture collections External links

[Ref.: #21957]

Culture collection no.

DSM 42117, KCTC 29245

[Ref.: #89230]

SI-ID 396749

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces seymenliensis sp. nov., isolated from soil.	Tatar D, Sahin N	Antonie Van Leeuwenhoek	10.1007/s10482-014-0339-5	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21957

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42117

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69345

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#89230

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396749.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces seymenliensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF