Name: Mangrovactinospora gilvigrisea DSM 42173
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130717

Type strain:

Species: Mangrovactinospora gilvigrisea

Culture col. no.: DSM 42173, MCCC 1K00504, MUSC 26

Strain history: <- L.-H. Lee, Monash University Malaya, Malaysia; MUSC 26

NCBI tax ID(s): 1428644 (species)

SI-ID 400721

DSM 42173

Special Collections

Section

Mangrovactinospora gilvigrisea DSM 42173 is a bacterium that builds an aerial mycelium and was isolated from mangrove sediment.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Mangrovactinospora*
	Species	**Mangrovactinospora gilvigrisea**
	Full Scientific Name (LPSN)	Mangrovactinospora gilvigrisea Madhaiyan et al. 2022

Synonym

"Streptomyces gilvigriseus"

Information on morphological and physiological properties Morphology

[Ref.: #69353]	Colony color	Grey beige (1019)
[Ref.: #69353]	Cultivation medium used	suter with tyrosine

[Ref.: #69353]	Colony color	Brown beige (1011), ivory (1014
[Ref.: #69353]	Cultivation medium used	suter without tyrosine

[Ref.: #69353]	Colony color	Brown beige (1011)
[Ref.: #69353]	Cultivation medium used	ISP 5

[Ref.: #69353]	Colony color	Ivory (1014), brown beige (1011)
[Ref.: #69353]	Cultivation medium used	ISP 3

[Ref.: #69353]	Colony color	Ochre yellow (1024)
[Ref.: #69353]	Cultivation medium used	ISP 2

[Ref.: #69353]	Colony color	Ochre yellow (1024)
[Ref.: #69353]	Cultivation medium used	ISP 4

[Ref.: #69353]	Colony color	Pale brown (8025)
[Ref.: #69353]	Cultivation medium used	ISP 7

[Ref.: #69353]	Colony color	Sand yellow (1002)
[Ref.: #69353]	Cultivation medium used	ISP 6

[Ref.: #69353]	Pigment production	no
[Ref.: #69353]	Pigment name	Melanin
[Ref.: #69353]	Pigment production	yes
[Ref.: #69353]	Pigmentation color	Ivory (1014), beige (1001), ocher brown (8001)
[Ref.: #69353]	Pigment name	soluble pigment

[Ref.: #69353]	Multicellular complex forming ability	yes
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Multicellular complex color	Pure white (9010)
[Ref.: #69353]	Medium Name (multicellularity)	ISP 2

[Ref.: #69353]	Multicellular complex forming ability	yes
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Multicellular complex color	Pure white (9010)
[Ref.: #69353]	Medium Name (multicellularity)	ISP 3

[Ref.: #69353]	Multicellular complex forming ability	no
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Medium Name (multicellularity)	ISP 4

[Ref.: #69353]	Multicellular complex forming ability	no
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Medium Name (multicellularity)	ISP 5

[Ref.: #69353]	Multicellular complex forming ability	no
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Medium Name (multicellularity)	ISP 6

[Ref.: #69353]	Multicellular complex forming ability	yes
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Multicellular complex color	Tele grey 4 (7047)
[Ref.: #69353]	Medium Name (multicellularity)	ISP 7

[Ref.: #69353]	Multicellular complex forming ability	no
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69353]	Multicellular complex forming ability	no
[Ref.: #69353]	Multicellular complex name	Aerial mycelium
[Ref.: #69353]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #21950]

Caption:

Medium 65 28°C

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Intellectual property rights:

[Ref.: #69353]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

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Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69353]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69353]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21950]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #21950]

Culture medium growth

[Ref.: #21950]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21950]

Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #21950]

Culture medium growth

[Ref.: #21950]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21950]

Culture medium composition

expand / minimize

[Ref.: #21950]

Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

[Ref.: #21950]

Culture medium growth

[Ref.: #21950]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21950]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21950]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69353]		NaCl		growth	0-5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69353]	arabinose ChEBI	+/-	growth
[Ref.: #69353]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69353]	fructose ChEBI	-	growth
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69353]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69353]	inositol ChEBI	-	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69353]	mannose ChEBI	+/-	growth
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne
[Ref.: #69353]	raffinose ChEBI	+/-	growth
[Ref.: #69353]	rhamnose ChEBI	+	growth
[Ref.: #69353]	sucrose ChEBI	+/-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69353]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69353]	3846	+	-	+	+	-	+	+	+	+	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69353]	6030	not determinedn.d.	+	+	+	-	+	+	+/-	-	+/-	+	+	+	+	-	+	+	+	+	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21950]	Sample type/isolated from	mangrove sediment
[Ref.: #21950]	Geographic location (country and/or sea, region)	Pahang,Tanjung Lumpur
[Ref.: #21950]	Country	Malaysia
[Ref.: #21950]	Country ISO 3 Code	MYS
[Ref.: #21950]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Mangrove
#Environmental	#Aquatic	#Sediment
#Host	#Plants	#Tree

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ632660 (>99% sequence identity) for Streptomyces gilvigriseus subclade from Microbeatlas

Aquatic Samples	83
Soil Samples	642
Animal Samples	324
Plant Samples	56
Total Samples	1105

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21950]	Mangrovactinospora gilvigrisea strain MUSC 26 16S ribosomal RNA gene, partial sequence	KJ632660	1494	GenBank ENA	1428644 tax ID

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GC-content

74.6 mol%

Availability in culture collections External links

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Culture collection no.

DSM 42173, MCCC 1K00504, MUSC 26

[Ref.: #89224]

SI-ID 400721

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequence of Streptomyces gilvigriseus MUSC 26(T) isolated from mangrove forest.	Ser HL, Tan WS, Mutalib NA, Yin WF, Chan KG, Goh BH, Lee LH	Braz J Microbiol	10.1016/j.bjm.2017.04.012	2018	*
Phylogeny	Streptomyces gilvigriseus sp. nov., a novel actinobacterium isolated from mangrove forest soil.	Ser HL, Zainal N, Palanisamy UD, Goh BH, Yin WF, Chan KG, Lee LH	Antonie Van Leeuwenhoek	10.1007/s10482-015-0431-5	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21950

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42173

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69353

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89224

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400721.1 )

* These data were automatically processed and therefore are not curated

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