Name: Staphylococcus argenteus MSHR1132
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130706

Type strain:

Species: Staphylococcus argenteus

Strain Designation: MSHR1132

Culture col. no.: DSM 28299, CIP 111113, JCM 31982, SSI 89.005, CCUG 70917, NCTC 13711

Strain history: CIP <- 2016, DSMZ <- S. Tong, Darwin Univ., Darwin, Australia: strain MSHR1132 <- D. Holt

NCBI tax ID(s): 985002 (species)

SI-ID 403275

DSM 28299, CIP 111113

Other strains from Staphylococcus argenteus

S. argenteus CCUG 69384
S. argenteus CCUG 69385
S. argenteus CCUG 70434
S. argenteus CCUG 70640

Section

Staphylococcus argenteus MSHR1132 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from blood culture of a 55-year-old Indigenous Australian female.

Gram-positive
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus argenteus**
	Full Scientific Name (LPSN)	Staphylococcus argenteus Tong et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #116490]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #116490]	Cell shape	coccus-shaped

[Ref.: #116490]	Motility	no

[Ref.: #21818]	Type of hemolysis	beta
[Ref.: #21818]	Hemolysis ability	1
[Ref.: #21818]	Incubation period	1-2 days

[Ref.: #63763]	Incubation period	1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42062]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #42062]

Culture medium growth

[Ref.: #42062]

Culture medium composition

expand / minimize

[Ref.: #21818]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #21818]

Culture medium growth

[Ref.: #21818]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21818]

Culture medium composition

expand / minimize

[Ref.: #21818]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21818]

Culture medium growth

[Ref.: #21818]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21818]

Culture medium composition

expand / minimize

[Ref.: #116490]

Culture medium

CIP Medium 72

[Ref.: #116490]

Culture medium growth

[Ref.: #116490]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #21818]	growth	37 °C
[Ref.: #42062]	growth	37 °C
[Ref.: #63763]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #21818]	Temperature range	mesophilic
[Ref.: #42062]	Temperature range	mesophilic
[Ref.: #63763]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63763]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %97
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.645

[Ref.: #67770]

Observation

quinones: MK-8, MK-7, MK-9

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	arginine ChEBI	+	hydrolysis	* from API ID32STA
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannitol ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	lactose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	maltose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	N-acetylglucosamine ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	nitrate ChEBI	+	reduction	* from API ID32STA
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	sucrose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	trehalose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	turanose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	urea ChEBI	+	hydrolysis	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68375]		acetoin ChEBI	yes	* from API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68375]		acetoin ChEBI	+	* from API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68375]	alkaline phosphatase	+	3.1.3.1	* from API ID32STA
[Ref.: #68375]	arginine dihydrolase	+	3.5.3.6	* from API ID32STA
[Ref.: #68375]	beta-galactosidase	-	3.2.1.23	* from API ID32STA
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA
[Ref.: #21818]	catalase	+	1.11.1.6
[Ref.: #21818]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #21818]	6255	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	-	-	+	+	+	-	-
[Ref.: #21818]	6208	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	+/-	+	+	+	+	-	-
[Ref.: #21818]	6126	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	-	+	+	+	+	-	-
[Ref.: #21818]	6125	+	+	-	+/-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	+/-	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21818]	Sample type/isolated from	blood culture of a 55-year-old Indigenous Australian female
[Ref.: #21818]	Geographic location (country and/or sea, region)	Northern Territory, Darwin
[Ref.: #21818]	Country	Australia
[Ref.: #21818]	Country ISO 3 Code	AUS
[Ref.: #21818]	Continent	Australia and Oceania
[Ref.: #21818]	Geographic location	-12.4634°/130.8460°

[Ref.: #63763]	Sample type/isolated from	Blood culture,55-year-old female
[Ref.: #63763]	Sampling date	2006
[Ref.: #63763]	Geographic location (country and/or sea, region)	Northern Territory, Darwin
[Ref.: #63763]	Country	Australia
[Ref.: #63763]	Country ISO 3 Code	AUS
[Ref.: #63763]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Blood culture of a 55-year-old Indigenous Australian female
[Ref.: #67770]	Geographic location (country and/or sea, region)	Darwin, Northern Territory
[Ref.: #67770]	Country	Australia
[Ref.: #67770]	Country ISO 3 Code	AUS
[Ref.: #67770]	Continent	Australia and Oceania

[Ref.: #116490]	Sample type/isolated from	Human, Blood (55 year old indigenous Australian female)
[Ref.: #116490]	Geographic location (country and/or sea, region)	Northern Territory , Darwin
[Ref.: #116490]	Country	Australia
[Ref.: #116490]	Country ISO 3 Code	AUS
[Ref.: #116490]	Continent	Australia and Oceania
[Ref.: #116490]	Isolation date	2011-01-03
* marker position based on {}

Isolation sources categories

#Infection	#Patient	#Blood culture
#Infection	#Patient	-
#Host	#Human	-
#Host	#Human	#Female

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MF678919 (>99% sequence identity) for Staphylococcus from Microbeatlas

Aquatic Samples	991
Soil Samples	353
Animal Samples	21663
Plant Samples	192
Total Samples	23199

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #116490]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Staphylococcus argenteus strain DSM 28299 16S ribosomal RNA gene, partial sequence	MF678919	1283	ENA	985002 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Staphylococcus argenteus NCTC13711	GCA_900457475	contig	GenBank	985002 tax ID
[Ref.: #67770]	Staphylococcus argenteus DSM 28299	GCA_002901785	scaffold	GenBank	985002 tax ID
[Ref.: #66792]	Staphylococcus argenteus DSM 28299	GCA_014877305	contig	GenBank	985002 tax ID	*
[Ref.: #66792]	Staphylococcus argenteus strain DSM 28299	985002.189	wgs	PATRIC	985002 tax ID	*
[Ref.: #66792]	Staphylococcus argenteus strain DSM 28299	985002.311	wgs	PATRIC	985002 tax ID	*
[Ref.: #66792]	Staphylococcus argenteus strain NCTC13711	985002.197	wgs	PATRIC	985002 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Staphylococcus argenteus MSHR1132 NCBI: GCA_000236925.1
[Ref.: #69481]	spore-forming	no	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Staphylococcus argenteus MSHR1132 NCBI: GCA_000236925.1
[Ref.: #69480]	motile	no	89.366	no
[Ref.: #69480]	flagellated	no	90.659	no
[Ref.: #69480]	gram-positive	yes	89.017	no
[Ref.: #69480]	anaerobic	no	99.509	yes
[Ref.: #69480]	aerobic	yes	89.088	no
[Ref.: #69480]	halophile	yes	92.13	no
[Ref.: #69480]	spore-forming	no	93.167	no
[Ref.: #69480]	thermophile	no	99.695	no
[Ref.: #69480]	glucose-util	yes	89.686	no
[Ref.: #69480]	glucose-ferment	yes	86.753	yes

Availability in culture collections External links

[Ref.: #21818]

Culture collection no.

DSM 28299, CIP 111113, JCM 31982, SSI 89.005, CCUG 70917, NCTC 13711

[Ref.: #89213]

SI-ID 403275

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Genetics	Novel insights into the enterotoxigenic potential and genomic background of Staphylococcus aureus isolated from raw milk.	Chieffi D, Fanelli F, Cho GS, Schubert J, Blaiotta G, Franz CMAP, Bania J, Fusco V	Food Microbiol	10.1016/j.fm.2020.103482	2020	*
Pathogenicity	Food poisoning outbreak in Tokyo, Japan caused by Staphylococcus argenteus.	Suzuki Y, Kubota H, Ono HK, Kobayashi M, Murauchi K, Kato R, Hirai A, Sadamasu K	Int J Food Microbiol	10.1016/j.ijfoodmicro.2017.09.005	2017	*
Phylogeny	Differentiation of Staphylococcus argenteus (formerly: Staphylococcus aureus clonal complex 75) by mass spectrometry from S. aureus using the first strain isolated from a wild African great ape.	Schuster D, Rickmeyer J, Gajdiss M, Thye T, Lorenzen S, Reif M, Josten M, Szekat C, Melo LDR, Schmithausen RM, Liegeois F, Sahl HG, Gonzalez JJ, Nagel M, Bierbaum G	Int J Med Microbiol	10.1016/j.ijmm.2016.11.003	2016	*
Phylogeny	Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov.	Tong SYC, Schaumburg F, Ellington MJ, Corander J, Pichon B, Leendertz F, Bentley SD, Parkhill J, Holt DC, Peters G, Giffard PM	Int J Syst Evol Microbiol	10.1099/ijs.0.062752-0	2014	*
Pathogenicity	Staphylococcus argenteus and Staphylococcus schweitzeri are cytotoxic to human cells in vitro due to high expression of alpha-hemolysin Hla.	Johansson C, Rautelin H, Kaden R	Virulence	10.1080/21505594.2019.1620062	2019	*
Metabolism	The role of Staphylococcal carotenogenesis in resistance to host defense peptides and in vivo virulence in experimental endocarditis model.	Xiong YQ, Yang SJ, Tong SY, Alvarez DN, Mishra NN	Pathog Dis	10.1093/femspd/ftv056	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21818

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28299

#42062 ; Curators of the CIP;
#63763 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 70917

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68375

Automatically annotated from API ID32STA .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89213

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403275.1 )

#116490 Collection of Institut Pasteur ; Curators of the CIP; CIP 111113
* These data were automatically processed and therefore are not curated

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