Staphylococcus argenteus (DSM 28299, CIP 111113, JCM 31982)

Name: Staphylococcus argenteus (DSM 28299, CIP 111113, JCM 31982)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130706

Type strain

Strain Designation MSHR1132

Culture col. no. DSM 28299 CIP 111113 JCM 31982 SSI 89.005 CCUG 70917 2 more

NCBI tax ID(s) 985002

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- S. Tong, Charles Darwin Univ., Menzies School of Health Res., Darwin, Australia; MSHR1132 <- D. Holt JCM <-- DSM 28299 <-- S. Y. C. Tong; Charles Darwin Univ., Australia; MSHR1132. CIP <- 2016, DSMZ <- S. Tong, Darwin Univ., Darwin, Australia: strain MSHR1132 <- D. Holt

Links

Staphylococcus argenteus MSHR1132 is an aerobe, Gram-positive, coccus-shaped bacterium that was isolated from blood culture of a 55-year-old Indigenous Australian female.

Gram-positive coccus-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 403275

NCTC 13711,JCM 31982,DSM 28299,CIP 111113,CCUG 70917T

@ref 20215

Last LPSN update 2026-05-29 08:37:26

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus argenteus

Full scientific name Staphylococcus argenteus Tong et al. 2015

Synonyms (1)

Staphylococcus singaporensis

BacDive ID	Other strains from **Staphylococcus argenteus** (4)	Type strain
157079	S. argenteus CCUG 69384
157080	S. argenteus CCUG 69385
157196	S. argenteus CCUG 70434
157216	S. argenteus CCUG 70640

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
116490	positive	coccus-shaped

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
21818	beta	1	1-2 days
63763			1 day

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
42062	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
21818	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
21818	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
116490	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
21818	positive	growth	37
42062	positive	growth	37
63763	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
63763	aerobe
125439	facultative anaerobe	93.742

Observation

67770

Observationquinones: MK-8, MK-7, MK-9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68375	22599 ChEBI	arabinose	-	fermentation	from API ID32STA
68375	29016 ChEBI	arginine	+	hydrolysis	from API ID32STA
68375	17057 ChEBI	cellobiose	-	fermentation	from API ID32STA
68375	15824 ChEBI	D-fructose	+	fermentation	from API ID32STA
68375	17634 ChEBI	D-glucose	+	fermentation	from API ID32STA
68375	16899 ChEBI	D-mannitol	+	fermentation	from API ID32STA
68375	16024 ChEBI	D-mannose	+	fermentation	from API ID32STA
68375	16988 ChEBI	D-ribose	-	fermentation	from API ID32STA
68375	17716 ChEBI	lactose	+	fermentation	from API ID32STA
68375	17306 ChEBI	maltose	+	fermentation	from API ID32STA
68375	59640 ChEBI	N-acetylglucosamine	+	fermentation	from API ID32STA
68375	17632 ChEBI	nitrate	+	reduction	from API ID32STA
68375	18257 ChEBI	ornithine	-	degradation	from API ID32STA
68375	16634 ChEBI	raffinose	-	fermentation	from API ID32STA
68375	17992 ChEBI	sucrose	+	fermentation	from API ID32STA
68375	27082 ChEBI	trehalose	+	fermentation	from API ID32STA
68375	32528 ChEBI	turanose	+	fermentation	from API ID32STA
68375	16199 ChEBI	urea	+	hydrolysis	from API ID32STA

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68375	15688 ChEBI	acetoin		from API ID32STA

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68375	15688 ChEBI	acetoin	+	from API ID32STA

Enzymes

@ref	Value	Activity	Ec
68375	alkaline phosphatase	+	3.1.3.1	from API ID32STA
68375	arginine dihydrolase	+	3.5.3.6	from API ID32STA
68375	beta-galactosidase	-	3.2.1.23	from API ID32STA
68375	beta-glucuronidase	-	3.2.1.31	from API ID32STA
21818	catalase	+	1.11.1.6
21818	cytochrome-c oxidase	-	1.9.3.1
68375	L-arginine arylamidase	-		from API ID32STA
68375	ornithine decarboxylase	-	4.1.1.17	from API ID32STA
68375	urease	+	3.5.1.5	from API ID32STA

API ID32STA

@ref	URE	ADH (Arg)	ODC	ESC	GLU	FRU	MNE	MAL	LAC	TRE	MAN	RAF	RIB	CEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta GAL	L-arginine arylamidaseArgA	PAL	Pyrrolidonyl arylamidasePyrA	NOVO	SAC	NAG	TUR	ARA	beta GUR
21818	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	-	-	+	+	+	-	-
21818	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	+/-	+	+	+	+	-	-
21818	+	+	-	-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	-	+	+	+	+	-	-
21818	+	+	-	+/-	+	+	+	+	+	+	+	-	-	-	+	+	-	-	+	+/-	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	#Blood culture
#Infection	#Patient	-
#Host	#Human	-
#Host	#Human	#Female

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Sampling date	Isolation date
21818	blood culture of a 55-year-old Indigenous Australian female	Homo sapiens	Northern Territory, Darwin	Australia	AUS	Australia and Oceania	-12.4634	130.846 -12.4634/130.846
63763	Blood culture,55-year-old female	Homo sapiens	Northern Territory, Darwin	Australia	AUS	Australia and Oceania			2006
67770	Blood culture of a 55-year-old Indigenous Australian female	Homo sapiens	Darwin, Northern Territory	Australia	AUS	Australia and Oceania
116490	Human, Blood (55 year old indigenous Australian female)	Homo sapiens	Northern Territory , Darwin	Australia	AUS	Australia and Oceania				2011-01-03

Taxonmaps

69479

Global distribution of 16S sequence MF678919 (>99% sequence identity) for Staphylococcus from Microbeatlas

Aquatic Samples	991
Soil Samples	353
Animal Samples	21663
Plant Samples	192
Total Samples	23199

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
116490	1	Risk group (French classification)
21818	2	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM23692v1 assembly for Staphylococcus argenteus MSHR1132	complete	GCA_000236925		2597489892	985002	98.96
67770	43781_H01 assembly for Staphylococcus argenteus NCTC13711	contig	GCA_900457475	985002.197	8053279742	985002	78.98
66792	ASM1487730v1 assembly for Staphylococcus argenteus DSM 28299	contig	GCA_014877305	985002.311	8119834001	985002	58.29
67770	ASM290178v1 assembly for Staphylococcus argenteus DSM 28299	scaffold	GCA_002901785	985002.189	2917471893	985002	58.17

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Staphylococcus argenteus strain DSM 28299 16S ribosomal RNA gene, partial sequence	MF678919	1283		985002
124043	Staphylococcus argenteus strain DSM 28299 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.	MF678863	4421		985002

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 43781_H01 assembly for Staphylococcus argenteus NCTC13711
BV-BRC: 985002.197

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	93.74	no
125439	gram_stain	BacteriaNetⓘ	positive	81.22	no
125439	motility	BacteriaNetⓘ	no	77.85	no
125439	spore_formation	BacteriaNetⓘ	no	84.24	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Staphylococcus argenteus MSHR1132
NCBI: GCA_000236925.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.01	no
125438	anaerobic	anaerobicⓘ	no	98.91	yes
125438	aerobic	aerobicⓘ	yes	56.52	no
125438	spore-forming	spore-formingⓘ	no	72.89	no
125438	thermophilic	thermophileⓘ	no	94.24	no
125438	flagellated	motile2+ⓘ	no	81.39	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Prevalence and genomic insights into type III-A CRISPR-Cas system acquisition in global Staphylococcus argenteus strains	Chen X, Xu L, Luo Z, Wang L, Wang Z, Li Y, Jiao X, Li Q.	Front Cell Infect Microbiol		2025
	Draft Genome Sequences of 64 Type Strains of 50 Species and 25 Subspecies of the Genus Staphylococcus Rosenbach 1884.	Cole K, Foster D, Russell JE, Golubchik T, Llewelyn M, Wilson DJ, Crook D, Paul J, Modernising Medical Microbiology Consortium.	Microbiol Resour Announc	10.1128/mra.00062-19	2019
Genetics	Novel insights into the enterotoxigenic potential and genomic background of Staphylococcus aureus isolated from raw milk.	Chieffi D, Fanelli F, Cho GS, Schubert J, Blaiotta G, Franz CMAP, Bania J, Fusco V	Food Microbiol	10.1016/j.fm.2020.103482	2020
Pathogenicity	Food poisoning outbreak in Tokyo, Japan caused by Staphylococcus argenteus.	Suzuki Y, Kubota H, Ono HK, Kobayashi M, Murauchi K, Kato R, Hirai A, Sadamasu K	Int J Food Microbiol	10.1016/j.ijfoodmicro.2017.09.005	2017
Phylogeny	Differentiation of Staphylococcus argenteus (formerly: Staphylococcus aureus clonal complex 75) by mass spectrometry from S. aureus using the first strain isolated from a wild African great ape.	Schuster D, Rickmeyer J, Gajdiss M, Thye T, Lorenzen S, Reif M, Josten M, Szekat C, Melo LDR, Schmithausen RM, Liegeois F, Sahl HG, Gonzalez JJ, Nagel M, Bierbaum G	Int J Med Microbiol	10.1016/j.ijmm.2016.11.003	2016
Pathogenicity	Staphylococcus argenteus and Staphylococcus schweitzeri are cytotoxic to human cells in vitro due to high expression of alpha-hemolysin Hla.	Johansson C, Rautelin H, Kaden R	Virulence	10.1080/21505594.2019.1620062	2019
Metabolism	The role of Staphylococcal carotenogenesis in resistance to host defense peptides and in vivo virulence in experimental endocarditis model.	Xiong YQ, Yang SJ, Tong SY, Alvarez DN, Mishra NN	Pathog Dis	10.1093/femspd/ftv056	2015
Phylogeny	Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov.	Tong SYC, Schaumburg F, Ellington MJ, Corander J, Pichon B, Leendertz F, Bentley SD, Parkhill J, Holt DC, Peters G, Giffard PM	Int J Syst Evol Microbiol	10.1099/ijs.0.062752-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21818	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28299
#42062	; Curators of the CIP;
#63763	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 70917
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68375	Automatically annotated from API ID32STA .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116490	Collection of Institut Pasteur ; Curators of the CIP; CIP 111113
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Staphylococcus argenteus (DSM 28299, CIP 111113, JCM 31982)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API ID32STA

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000236925

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media