Name: Staphylococcus capitis G29
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130691

Type strain:

Species: Staphylococcus capitis

Strain Designation: G29

Culture col. no.: DSM 31028

Strain history: <- European Space Agency, Noordwijk, Netherlands <- A. Auerbach, Univ. Regensburg, Germany; G29

NCBI tax ID(s): 29388 (species)

SI-ID 399475

DSM 31028

Other strains from Staphylococcus capitis

S. capitis K2-11, DSM 30912
S. capitis G6, DSM 31024
S. capitis C4, DSM 100935
S. capitis C6, DSM 100937
S. capitis C7, DSM 100938
S. capitis C8, DSM 100939
S. capitis CCUG 28454
S. capitis CCUG 32891
S. capitis CCUG 39451
S. capitis CCUG 41529
S. capitis CCUG 42023
S. capitis CCUG 42761
S. capitis CCUG 43705 B
S. capitis CCUG 44764
S. capitis CCUG 48417
S. capitis CCUG 50700
S. capitis CCUG 53112
S. capitis CCUG 53281
S. capitis CCUG 55469
S. capitis H36, DSM 103511
S. capitis 8aTA_T4, DSM 103967
S. capitis Stevenage 150518_C7, DSM 107792
S. capitis St_T2, DSM 110304
S. capitis SB 239, DSM 111811
S. capitis K1-2-2-23, DSM 111179
S. capitis H17, DSM 113836

Section

Staphylococcus capitis G29 is a mesophilic human pathogen that was isolated from cleanroom, wipe sample.

human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus capitis**
	Full Scientific Name (LPSN)	Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21803]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #21803]

Culture medium growth

[Ref.: #21803]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21803]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21803]			growth	28 °C

[Ref.: #21803]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21803]	Sample type/isolated from	cleanroom, wipe sample
[Ref.: #21803]	Geographic location (country and/or sea, region)	Göttingen, MPS
[Ref.: #21803]	Country	Germany
[Ref.: #21803]	Country ISO 3 Code	DEU
[Ref.: #21803]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Built environment

#Clean room

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21803]	Pathogenicity (human)	yes, in single cases
[Ref.: #21803]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Staphylococcus capitis subsp. capitis DSM 31028	GCA_025370135	scaffold	GenBank	72758 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Staphylococcus capitis subsp. capitis DSM 31028 NCBI: GCA_025370135.1
[Ref.: #69480]	motile	no	91.577	no
[Ref.: #69480]	flagellated	no	93.066	no
[Ref.: #69480]	gram-positive	yes	92.028	no
[Ref.: #69480]	anaerobic	no	99.421	no
[Ref.: #69480]	aerobic	yes	90.81	no
[Ref.: #69480]	halophile	yes	95.358	no
[Ref.: #69480]	spore-forming	no	92.846	no
[Ref.: #69480]	glucose-ferment	yes	81.704	no
[Ref.: #69480]	thermophile	no	99.831	yes
[Ref.: #69480]	glucose-util	yes	90.471	no

Availability in culture collections External links

[Ref.: #21803]

Culture collection no.

DSM 31028

[Ref.: #89198]

SI-ID 399475

Literature:

Topic	Title	Authors	Journal	DOI	Year
Stress	Phenotypic and genomic assessment of the potential threat of human spaceflight-relevant Staphylococcus capitis isolates under stress conditions.	Siems K, Runzheimer K, Rehm A, Schwengers O, Heidler von Heilborn D, Kaser L, Arndt F, Neidhofer C, Mengel JP, Parcina M, Lipski A, Hain T, Moeller R	Front Microbiol	10.3389/fmicb.2022.1007143	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21803

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 31028

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89198

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399475.1 )

* These data were automatically processed and therefore are not curated

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Staphylococcus capitis subsp. capitis DSM 31028

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