Maritimibacter alkaliphilus (DSM 100037, KCCM 42376, NBRC 102057)

Name: Maritimibacter alkaliphilus (DSM 100037, KCCM 42376, NBRC 102057)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130632

Type strain

Culture col. no. DSM 100037 KCCM 42376 NBRC 102057 HTCC 2654 CIP 109640

NCBI tax ID(s) 404236

Special Collections DSMZ Literature strains CIP

History <- NBRC <- Y.-J. Choo, Inha University, Incheon, Korea; HTCC2654 CIP <- 2007, NBRC <- Y.J. Choo, Inha Univ., Inceon, Korea: strain HTCC2654

Links

Maritimibacter alkaliphilus DSM 100037 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 293901

DSM 100037,NBRC 102057,CIP 109640

@ref 20215

Last LPSN update 2026-02-09 11:31:16

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Maritimibacter

Species Maritimibacter alkaliphilus

Full scientific name Maritimibacter alkaliphilus Lee et al. 2007

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
32097	negative	1.95 µm	0.8 µm	rod-shaped
116246	negative			rod-shaped

Colony morphology

22055

Incubation period2-3 days

Pigmentation

32097

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22055	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
33316	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
116246	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
22055	positive	growth	30
32097	positive	growth	16-37
32097	positive	optimum	30
33316	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
32097	positive	optimum	10
32097	positive	growth	4.0-12	alkaliphile

Physiology and metabolism

Oxygen tolerance

32097

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32097	NaCl	positive	growth	0.5-7.5 %
32097	NaCl	positive	optimum	2.75 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32097	30089 ChEBI	acetate	+	carbon source
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
32097	23652 ChEBI	dextrin	+	carbon source
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
32097	17234 ChEBI	glucose	+	carbon source
32097	29987 ChEBI	glutamate	+	carbon source
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
32097	28087 ChEBI	glycogen	+	carbon source
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
32097	17596 ChEBI	inosine	+	carbon source
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
32097	24996 ChEBI	lactate	+	carbon source
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
32097	17306 ChEBI	maltose	+	carbon source
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
32097	51850 ChEBI	methyl pyruvate	+	carbon source
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
116246	17632 ChEBI	nitrate	-	reduction
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
116246	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
32097	30031 ChEBI	succinate	+	carbon source
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
32097	17748 ChEBI	thymidine	+	carbon source
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
32097	53423 ChEBI	tween 40	+	carbon source
32097	53426 ChEBI	tween 80	+	carbon source
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
116246	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
32097	alkaline phosphatase	+	3.1.3.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
22055	catalase	+	1.11.1.6
32097	catalase	+	1.11.1.6
116246	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
32097	cytochrome oxidase	+	1.9.3.1
22055	cytochrome-c oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	-		from API 20NE
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
116246	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
32097	urease	+	3.5.1.5
116246	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
22055	-	-	+	+	-	+/-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-
116246	-	+	+	+	-	+	-	-	-	-	-	+	-	-	-	+	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
22055	-	-	-	-	+	+/-	-	-	+	-	+	+	-	+	-	-	+/-	+	-	+/-	not determinedn.d.
22055	-	-	-	-	-	-	-	-	+	-	+	+	-	+	-	-	+/-	+	-	+	not determinedn.d.

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
116246	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+/-	-	-	-	+	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	+/-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Isolation date
22055	seawater	Sargasso Sea, Bermuda Atlantic Time Series Station
116246	Environment, Seawater	Sargasso Sea	Atlantic Ocean	2001

Taxonmaps

69479

Global distribution of 16S sequence DQ915443 (>99% sequence identity) for Maritimibacter alkaliphilus subclade from Microbeatlas

Aquatic Samples	73
Soil Samples	9
Animal Samples	2
Plant Samples	2
Total Samples	86

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22055	1	Risk group (German classification)
116246	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM812477v1 assembly for Maritimibacter alkaliphilus HTCC2654	contig	GCA_008124775	314271.16	2693429867	314271	72.49

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22055	Maritimibacter alkaliphilus strain HTCC2654 16S ribosomal RNA gene, partial sequence	DQ915443	1407		314271
124043	Maritimibacter alkaliphilus gene for 16S rRNA, partial sequence, strain: NBRC 102057.	AB681686	1393		404236

GC content

32097

GC-content (mol%)61.7

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Applications of Marine-Derived Microorganisms and Their Enzymes in Biocatalysis and Biotransformation, the Underexplored Potentials.	Birolli WG, Lima RN, Porto ALM.	Front Microbiol	10.3389/fmicb.2019.01453	2019
Genetics	Genome sequences of Pelagibaca bermudensis HTCC2601T and Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine Roseobacter genera.	Thrash JC, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ	J Bacteriol	10.1128/JB.00873-10	2010
Genetics	Biocatalytic resolution of glycidyl phenyl ether using a novel epoxide hydrolase from a marine bacterium, Maritimibacter alkaliphilus KCCM 42376 [corrected].	Woo JH, Kang JH, Hwang YO, Cho JC, Kim SJ, Kang SG	J Biosci Bioeng	10.1016/j.jbiosc.2009.11.019	2010
Phylogeny	Maritimibacter lacisalsi sp. nov., isolated from a salt lake, and emended description of the genus Maritimibacter Lee et al. 2007.	Zhong ZP, Liu Y, Zhou YG, Liu HC, Wang F, Liu ZP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000437	2015
Phylogeny	Maritimibacter dapengensis sp. nov., a poly-beta-hydroxyalkanoates-producing bacterium isolated from sediment of the Dapeng peninsula (Guangdong, China).	Yu SY, Zheng WS, Huang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005303	2022
Phylogeny	Maritimibacter alexandrii sp. nov., a New Member of Rhodobacteraceae Isolated from Marine Phycosphere.	Wang X, Ye Y, Xu FF, Duan YH, Xie PF, Yang Q, Zhang XL	Curr Microbiol	10.1007/s00284-021-02645-z	2021
Phylogeny	Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand.	Khan SA, Jung HS, Park HY, Jeon CO	Antonie Van Leeuwenhoek	10.1007/s10482-021-01559-x	2021
Phylogeny	Lutimaribacter saemankumensis gen. nov., sp. nov., isolated from a tidal flat of the Yellow Sea.	Yoon JH, Kang SJ, Lee JS, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.000109-0	2009
Phylogeny	Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales.	Lee K, Choo YJ, Giovannoni SJ, Cho JC	Int J Syst Evol Microbiol	10.1099/ijs.0.64960-0	2007

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22055	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100037
#28342	IJSEM 1653 2007 ( DOI 10.1099/ijs.0.64960-0 , PubMed 17625211 )
#32097	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28342
#33316	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116246	Collection of Institut Pasteur ; Curators of the CIP; CIP 109640
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Maritimibacter alkaliphilus (DSM 100037, KCCM 42376, NBRC 102057)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_008124775

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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