Sulfitobacter porphyrae SCM-1 is a mesophilic prokaryote that was isolated from cultivation medium of red alga Porphyra yezoensis.
mesophilic genome sequence 16S sequence| @ref 20215 |
Last LPSN update
2025-12-16 10:01:02 |
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Rhodobacterales |
| Family Roseobacteraceae |
| Genus Sulfitobacter |
| Species Sulfitobacter porphyrae |
| Full scientific name Sulfitobacter porphyrae Fukui et al. 2014 |
| BacDive ID | Other strains from Sulfitobacter porphyrae (3) | Type strain |
|---|---|---|
| 175326 | S. porphyrae DG1020, DSM 109638 | |
| 176938 | S. porphyrae S12B-106, DSM 111387 | |
| 176939 | S. porphyrae A11D-105, DSM 111388 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 21825 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive  | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 21825 | positive | growth | 30 | mesophilic |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | + | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Sample type | Host species | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 21825 | cultivation medium of red alga Porphyra yezoensis | Porphyra yezoensis | Japan | JPN | Asia |
Global distribution of 16S sequence AB758574 (>99% sequence identity) for Sulfitobacter from Microbeatlas 
 Aquatic Samples |
460 |
 Soil Samples |
29 |
 Animal Samples |
7 |
 Plant Samples |
3 |
| Total Samples | 499 |
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | BV-BRC accession | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM4266154v1 assembly for Sulfitobacter porphyrae NBRC 109054 | contig | GCA_042661545   | 1246864 | 4.04 | | |
| 124043 | ASM3016119v1 assembly for Sulfitobacter porphyrae NBRC 109054 | scaffold | GCA_030161195 | 1246864 | 1246864.4  | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 21825 | Sulfitobacter porphyrae gene for 16S ribosomal RNA, partial sequence, strain: SCM-1 | AB758574 | 1321 |  | 1246864 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Arenibacterium halophilum gen. nov., sp. nov., a halotolerant bacterium in the family Rhodobacteraceae isolated from a coastal sand dune. | Baek J, Kim JH, Yoon JH, Lee JS, Sukhoom A, Kim W | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004534 | 2020 | |
| Phylogeny | Sulfitobacter pacificus sp. nov., isolated from the red alga Pyropia yezoensis. | Fukui Y, Abe M, Kobayashi M, Satomi M | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0407-5 | 2015 | |
| Phylogeny | Sulfitobacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis. | Fukui Y, Abe M, Kobayashi M, Shimada Y, Saito H, Oikawa H, Yano Y, Satomi M | Int J Syst Evol Microbiol | 10.1099/ijs.0.053090-0 | 2013 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive130628.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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