Name: Pseudomonas helmanticensis OHA11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130576

Type strain:

Species: Pseudomonas helmanticensis

Strain Designation: OHA11

Culture col. no.: DSM 28442, CECT 8548, LMG 28168

Strain history: <- A. Peix, IRNASA-CSIC, Salamanca, Spain; OHA11

NCBI tax ID(s): 1471381 (species)

SI-ID 392392

LMG 28168, CECT 8548, DSM 28442

Section

Pseudomonas helmanticensis OHA11 is a mesophilic bacterium that was isolated from forest soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas helmanticensis**
	Full Scientific Name (LPSN)	Pseudomonas helmanticensis Ramírez-Bahena et al. 2014

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #22026]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22026]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #22026]

Culture medium growth

[Ref.: #22026]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22026]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22026]			growth	28 °C

[Ref.: #22026]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22026]	Sample type/isolated from	forest soil
[Ref.: #22026]	Geographic location (country and/or sea, region)	Salamanca
[Ref.: #22026]	Country	Spain
[Ref.: #22026]	Country ISO 3 Code	ESP
[Ref.: #22026]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HG940537 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	124
Soil Samples	197
Animal Samples	162
Plant Samples	153
Total Samples	636

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22026]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22026]	Pseudomonas helmanticensis partial 16S rRNA gene, strain OHA11	HG940537	1472	ENA	1471381 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas helmanticensis LMG 28168	2617270757	draft	JGI IMG/M	1471381 tax ID	*

[Ref.: #22026]

GC-content

58.1 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #22026]

Culture collection no.

DSM 28442, CECT 8548, LMG 28168

[Ref.: #89093]

SI-ID 392392

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudomonas atagosis sp. nov., and Pseudomonas akappagea sp. nov., New Soil Bacteria Isolated from Samples on the Volcanic Island Izu Oshima, Tokyo.	Morimoto Y, Uwabe K, Tohya M, Hiramatsu K, Kirikae T, Baba T	Curr Microbiol	10.1007/s00284-020-01943-2	2020	*
Phylogeny	Pseudomonas helmanticensis sp. nov., isolated from forest soil.	Ramirez-Bahena MH, Cuesta MJ, Flores-Felix JD, Mulas R, Rivas R, Castro-Pinto J, Branas J, Mulas D, Gonzalez-Andres F, Velazquez E, Peix A	Int J Syst Evol Microbiol	10.1099/ijs.0.063560-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22026

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28442

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89093

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID392392.1 )

* These data were automatically processed and therefore are not curated

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