Name: Chryseomonas asuensis CP155-2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130568

Type strain:

Species: Chryseomonas asuensis

Strain Designation: CP155-2

Culture col. no.: DSM 17866, ATCC BAA-1264, JCM 13501, KCTC 32484, LMG 28687

Strain history: F. Garcia-Pichel CP 155-2.

NCBI tax ID(s): 1825787 (species)

SI-ID 397723

DSM 17866

Section

Chryseomonas asuensis CP155-2 is a mesophilic, motile bacterium that was isolated from biological soil crusts.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Chryseomonas*
	Species	**Chryseomonas asuensis**
	Full Scientific Name (LPSN)	Chryseomonas asuensis (Reddy and Garcia-Pichel 2015) Saati-Santamaría et al. 2021

Synonym

Pseudomonas asuensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.969

[Ref.: #69480]	Motility	yes Confidence in %98.936

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22018]

Culture medium

REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)

[Ref.: #22018]

Culture medium growth

[Ref.: #22018]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22018]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22018]			growth	30 °C
[Ref.: #67770]			growth	25 °C

[Ref.: #22018]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.985

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	+		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #22018]	23013	+	-	-	-	-	+	+	+	+	+	+	+	-	+	+	+	-	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22018]	Sample type/isolated from	biological soil crusts
[Ref.: #22018]	Geographic location (country and/or sea, region)	Colorado Plateau
[Ref.: #22018]	Country	USA
[Ref.: #22018]	Country ISO 3 Code	USA
[Ref.: #22018]	Continent	North America
[Ref.: #22018]	Geographic location	38.3831°/109.8890°

[Ref.: #67770]	Sample type/isolated from	Biological soil crusts from the Colorado Plateau
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ871471 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	244
Soil Samples	128
Animal Samples	827
Plant Samples	166
Total Samples	1365

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22018]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas asuensis partial 16S rRNA gene, type strain CP155-2T	AJ871471	1501	ENA	1825787 tax ID
[Ref.: #22018]		AAJ871471		ENA

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas asuensis JCM 13501	GCA_014646755	scaffold	GenBank	1825787 tax ID	*
[Ref.: #66792]	Pseudomonas asuensis strain JCM 13501	1825787.3	wgs	PATRIC	1825787 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudomonas asuensis JCM 13501 NCBI: GCA_014646755.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas asuensis JCM 13501 NCBI: GCA_014646755.1
[Ref.: #69480]	flagellated	no	53.609	no
[Ref.: #69480]	gram-positive	no	98.254	no
[Ref.: #69480]	anaerobic	no	98.539	no
[Ref.: #69480]	aerobic	yes	90.751	no
[Ref.: #69480]	halophile	no	90.67	no
[Ref.: #69480]	spore-forming	no	94.478	no
[Ref.: #69480]	thermophile	no	99.436	yes
[Ref.: #69480]	glucose-util	yes	96.438	no
[Ref.: #69480]	motile	yes	86.002	no
[Ref.: #69480]	glucose-ferment	no	87.442	yes

Availability in culture collections External links

[Ref.: #22018]

Culture collection no.

DSM 17866, ATCC BAA-1264, JCM 13501, KCTC 32484, LMG 28687

[Ref.: #89087]

SI-ID 397723

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22018

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17866

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89087

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397723.1 )

* These data were automatically processed and therefore are not curated

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Pseudomonas asuensis JCM 13501

Pseudomonas asuensis JCM 13501

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