Pseudomonas veronii 92-134 is an aerobe, Gram-negative, motile bacterium that was isolated from mineral water.
Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Pseudomonadaceae |
| Genus Pseudomonas |
| Species Pseudomonas veronii |
| Full scientific name Pseudomonas veronii Elomari et al. 1996 |
| BacDive ID | Other strains from Pseudomonas veronii (7) | Type strain |
|---|---|---|
| 12968 | P. veronii PWD35, DSM 11567 | |
| 13056 | P. veronii MG61, DSM 16272 | |
| 13057 | P. veronii 16-6A, DSM 16273 | |
| 131069 | P. veronii Z-0064, DSM 9960 | |
| 136674 | P. veronii CIP 107595, JCM 11829, INA 05 | |
| 161436 | P. veronii JCM 13987 | |
| 175024 | P. veronii G2, DSM 114734 |
| @ref | Production | Name | |
|---|---|---|---|
| 123822 | Pyocyanin |
| @ref: | 4301 |
| multimedia content: | DSM_11331.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_11331.jpg |
| caption: | Iridescence of DSM 11331 on medium 535 at 28 °C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 4301 | REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) | Medium recipe at MediaDive | Name: REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) Composition: Trypticase soy broth 30.0 g/l Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l K2HPO4 2.5 g/l D(+)-Glucose 2.5 g/l Distilled water | ||
| 4301 | REACTIVATION WITH TRYPTONE SOYA BROTH (DSMZ Medium 220a) | Medium recipe at MediaDive | Name: REACTIVATION WITH TRYPTONE SOYA BROTH (DSMZ Medium 220a) Composition: Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water | ||
| 40474 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 41260 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 123822 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.889 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 29016 ChEBI | arginine | + | hydrolysis | from API 20NE |
| 123822 | 16947 ChEBI | citrate | + | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | + | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | + | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 123822 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | + | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | + | assimilation | from API 20NE |
| 123822 | 17632 ChEBI | nitrate | + | reduction | |
| 123822 | 17632 ChEBI | nitrate | + | respiration | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 123822 | 16301 ChEBI | nitrite | + | reduction | |
| 123822 | 15882 ChEBI | phenol | + | degradation | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 123822 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 123822 | amylase | + | ||
| 68369 | arginine dihydrolase | + | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123822 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 123822 | caseinase | - | 3.4.21.50 | |
| 123822 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 123822 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 123822 | gelatinase | - | ||
| 123822 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 123822 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 123822 | ornithine decarboxylase | - | 4.1.1.17 | |
| 123822 | oxidase | + | ||
| 123822 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 123822 | tryptophan deaminase | - | ||
| 123822 | tween esterase | - | ||
| 123822 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
Global distribution of 16S sequence AF064460 (>99% sequence identity) for Pseudomonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | G8123 assembly for Pseudomonas veronii DSM 11331 | contig | 76761 | 60.43 | ||||
| 66792 | IMG-taxon 2642422516 annotated assembly for Pseudomonas marginalis BS2778 | contig | 298 | 50.92 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 61 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 86.54 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 85.17 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.24 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.89 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 96.50 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.50 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 87.33 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 86.46 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.00 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 90.79 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Complete genome sequence of Pseudomonas veronii strain OST1911 isolated from oil sand tailing pond water in Alberta, Canada. | Shideler SM, Goff K, Gauthier J, Levesque RC, Lewenza S. | Microbiol Resour Announc | 10.1128/mra.00646-23 | 2023 | ||
| Genetics | Genomic Insights into Phosphorus Solubilization of Pseudomonas extremaustralis. | Mayer C, Urrutia C, Jerez-Quezada C, Barra PJ, Abanto M. | Microorganisms | 10.3390/microorganisms13040911 | 2025 | |
| Genome Sequence of Pseudomonas veronii Strain G2, a Member of a Bacterial Consortium Capable of Polyethylene Degradation. | Schneider B, Pfeiffer F, Dyall-Smith M, Kunte HJ. | Microbiol Resour Announc | 10.1128/mra.00365-22 | 2022 | ||
| Genetics | Proteogenomic Characterization of Pseudomonas veronii SM-20 Growing on Phenanthrene as Only Carbon and Energy Source. | Zavala-Meneses SG, Firrincieli A, Chalova P, Pajer P, Checcucci A, Skultety L, Cappelletti M. | Microorganisms | 10.3390/microorganisms12040753 | 2024 | |
| Pseudomonas veronii strain 7-41 degrading medium-chain n-alkanes and polycyclic aromatic hydrocarbons. | Mullaeva SA, Delegan YA, Streletskii RA, Sazonova OI, Petrikov KV, Ivanova AA, Dyatlov IA, Shemyakin IG, Bogun AG, Vetrova AA. | Sci Rep | 10.1038/s41598-022-25191-5 | 2022 | ||
| Bioanalytical System for Determining the Phenol Index Based on Pseudomonas putida BS394(pBS216) Bacteria Immobilized in a Redox-Active Biocompatible Composite Polymer "Bovine Serum Albumin-Ferrocene-Carbon Nanotubes". | Perchikov RN, Provotorova DV, Kharkova AS, Arlyapov VA, Medvedeva AS, Machulin AV, Filonov AE, Reshetilov AN. | Polymers (Basel) | 10.3390/polym14245366 | 2022 | ||
| Genetics | Comprehensive genome analysis of Pseudomonas sp. SWRIQ11, a new plant growth-promoting bacterium that alleviates salinity stress in olive. | Zamanzadeh-Nasrabadi SM, Mohammadiapanah F, Sarikhan S, Shariati V, Saghafi K, Hosseini-Mazinani M. | 3 Biotech | 10.1007/s13205-023-03755-0 | 2023 | |
| Registration of BOD using Paracoccus yeei bacteria isolated from activated sludge. | Arlyapov VA, Yudina NY, Asulyan LD, Kamanina OA, Alferov SV, Shumsky AN, Machulin AV, Alferov VA, Reshetilov AN. | 3 Biotech | 10.1007/s13205-020-02199-0 | 2020 | ||
| A Pseudomonas Lysogenic Bacteriophage Crossing the Antarctic and Arctic, Representing a New Genus of Autographiviridae. | Liu Z, Jiang W, Kim C, Peng X, Fan C, Wu Y, Xie Z, Peng F. | Int J Mol Sci | 10.3390/ijms24087662 | 2023 | ||
| Phylogeny | Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica. | Smirnova M, Miamin U, Kohler A, Valentovich L, Akhremchuk A, Sidarenka A, Dolgikh A, Shapaval V. | Microbiologyopen | 10.1002/mbo3.1152 | 2021 | |
| Diversity analysis of endophytes with antimicrobial and antioxidant potential from Viola odorata: an endemic plant species of the Himalayas. | Salwan R, Salwan R, Rana A, Saini R, Sharma A, Sharma M, Sharma V. | Braz J Microbiol | 10.1007/s42770-023-01010-5 | 2023 | ||
| Draft whole genome sequence for four highly copper resistant soil isolates Pseudomonas lactis strain UKR1, Pseudomonas panacis strain UKR2, and Pseudomonas veronii strains UKR3 and UKR4. | Havryliuk O, Hovorukha V, Patrauchan M, Youssef NH, Tashyrev O. | Curr Res Microb Sci | 10.1016/j.crmicr.2020.06.002 | 2020 | ||
| Enzymology | Components of rhizospheric bacterial communities of barley and their potential for plant growth promotion and biocontrol of Fusarium wilt of watermelon. | Yang W. | Braz J Microbiol | 10.1007/s42770-019-00089-z | 2019 | |
| Pseudomonads Rule Degradation of Polyaromatic Hydrocarbons in Aerated Sediment. | Wald J, Hroudova M, Jansa J, Vrchotova B, Macek T, Uhlik O. | Front Microbiol | 10.3389/fmicb.2015.01268 | 2015 | ||
| Mesorhizobium sp. J8 can establish symbiosis with Glycyrrhiza uralensis, increasing glycyrrhizin production. | Kusaba I, Nakao T, Maita H, Sato S, Chijiiwa R, Yamada E, Arima S, Kojoma M, Ishimaru K, Akashi R, Suzuki A. | Plant Biotechnol (Tokyo) | 10.5511/plantbiotechnology.20.1124a | 2021 | ||
| Uptake of carbamazepine by rhizomes and endophytic bacteria of Phragmites australis. | Sauvetre A, Schroder P. | Front Plant Sci | 10.3389/fpls.2015.00083 | 2015 | ||
| Metabolism | Isolating, identifying and evaluating of oil degradation strains for the air-assisted microbial enhanced oil recovery process. | Cheng M, Yu L, Gao J, Lei G, Zhang Z. | PLoS One | 10.1371/journal.pone.0243976 | 2021 | |
| Plasmid donor affects host range of promiscuous IncP-1beta plasmid pB10 in an activated-sludge microbial community. | De Gelder L, Vandecasteele FP, Brown CJ, Forney LJ, Top EM. | Appl Environ Microbiol | 10.1128/aem.71.9.5309-5317.2005 | 2005 | ||
| Metabolism | Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding isopropylbenzene dioxygenases. | Witzig R, Junca H, Hecht HJ, Pieper DH. | Appl Environ Microbiol | 10.1128/aem.72.5.3504-3514.2006 | 2006 | |
| Metabolite-mediated modelling of microbial community dynamics captures emergent behaviour more effectively than species-species modelling. | Brunner JD, Chia N. | J R Soc Interface | 10.1098/rsif.2019.0423 | 2019 | ||
| Modifying and reacting to the environmental pH can drive bacterial interactions. | Ratzke C, Gore J. | PLoS Biol | 10.1371/journal.pbio.2004248 | 2018 | ||
| Mortality causes universal changes in microbial community composition. | Abreu CI, Friedman J, Andersen Woltz VL, Gore J. | Nat Commun | 10.1038/s41467-019-09925-0 | 2019 | ||
| Microbial communities display alternative stable states in a fluctuating environment. | Abreu CI, Andersen Woltz VL, Friedman J, Gore J. | PLoS Comput Biol | 10.1371/journal.pcbi.1007934 | 2020 | ||
| Interspecies bacterial competition regulates community assembly in the C. elegans intestine. | Ortiz A, Vega NM, Ratzke C, Gore J. | ISME J | 10.1038/s41396-021-00910-4 | 2021 | ||
| Metabolism | Pyrimidine biosynthesis in Pseudomonas veronii and its regulation by pyrimidines. | West TP | Microbiol Res | 10.1016/j.micres.2011.10.002 | 2011 | |
| Enzymology | NADP(+)-dependent l-arginine dehydrogenase from Pseudomonas velonii: Purification, characterization and application to an l-arginine assay. | Ohshima T, Tanaka M, Ohmori T | Protein Expr Purif | 10.1016/j.pep.2022.106135 | 2022 | |
| Pseudomonas kulmbachensis sp. nov. and Pseudomonas paraveronii sp. nov., originating from chilled beef and chicken breast. | Lick S, Wibberg D, Busche T, Blom J, Grimmler C, Goesmann A, Kalinowski J. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006293 | 2024 | ||
| Plant growth promotion of the forage plant Lupinus albus Var. Orden Dorado using Pseudomonas agronomica sp. nov. and Bacillus pretiosus sp. nov. added over a valorized agricultural biowaste. | Robas Mora M, Fernandez Pastrana VM, Oliva LLG, Lobo AP, Jimenez Gomez PA. | Front Microbiol | 10.3389/fmicb.2022.1046201 | 2022 | ||
| Phylogeny | Pseudomonas fildesensis sp. nov., a psychrotolerant bacterium isolated from Antarctic soil of King George Island, South Shetland Islands. | Pavlov MS, Lira F, Martinez JL, Olivares-Pacheco J, Marshall SH | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004165 | 2020 | |
| Phylogeny | Pseudomonas carnis sp. nov., isolated from meat. | Lick S, Krockel L, Wibberg D, Winkler A, Blom J, Bantleon A, Goesmann A, Kalinowski J | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003928 | 2020 | |
| Phylogeny | Pseudomonas lactis sp. nov. and Pseudomonas paralactis sp. nov., isolated from bovine raw milk. | von Neubeck M, Huptas C, Gluck C, Krewinkel M, Stoeckel M, Stressler T, Fischer L, Hinrichs J, Scherer S, Wenning M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001836 | 2017 | |
| Phylogeny | Pseudomonas extremaustralis sp. nov., a Poly(3-hydroxybutyrate) producer isolated from an antarctic environment. | Lopez NI, Pettinari MJ, Stackebrandt E, Tribelli PM, Potter M, Steinbuchel A, Mendez BS | Curr Microbiol | 10.1007/s00284-009-9469-9 | 2009 | |
| Phylogeny | Pseudomonas grimontii sp. nov. | Baida N, Yazourh A, Singer E, Izard D | Int J Syst Evol Microbiol | 10.1099/00207713-52-5-1497 | 2002 | |
| Phylogeny | DNA relatedness among Pseudomonas strains isolated from natural mineral waters and proposal of Pseudomonas veronii sp. nov. | Elomari M, Coroler L, Hoste B, Gillis M, Izard D, Leclerc H | Int J Syst Bacteriol | 10.1099/00207713-46-4-1138 | 1996 |
| #4301 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11331 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40474 | ; Curators of the CIP; |
| #41260 | ; Curators of the CIP; |
| #55912 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 43519 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123822 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104663 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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