Name: Kurthia senegalensis JC8E
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130537

Type strain:

Species: Kurthia senegalensis

Strain Designation: JC8E

Culture col. no.: DSM 24641, CSUR P138

Strain history: <- V. Roux, Timone Hospital, Marseille, France; JC8E <- J.-C. Lagier

NCBI tax ID(s): 1033740 (species)

SI-ID 399730

DSM 24641

Other strains from Kurthia senegalensis

K. senegalensis JC8J, DSM 24642

Section

Kurthia senegalensis JC8E is a mesophilic bacterium that was isolated from human stool from a healthy 16-year-old male volunteer living in a rural village.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Kurthia*
	Species	**Kurthia senegalensis**
	Full Scientific Name (LPSN)	Kurthia senegalensis Roux et al. 2016

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21621]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #21621]

Culture medium growth

[Ref.: #21621]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21621]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21621]			growth	28 °C

[Ref.: #21621]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21621]	Murein short key	A11.33
[Ref.: #21621]	Murein types	A4alpha L-Lys-D-Glu

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21621]	Sample type/isolated from	human stool from a healthy 16-year-old male volunteer living in a rural village
[Ref.: #21621]	Geographic location (country and/or sea, region)	Guinean-Sudanian zone, Dielmo
[Ref.: #21621]	Country	Senegal
[Ref.: #21621]	Country ISO 3 Code	SEN
[Ref.: #21621]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host	#Human	#Male
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF824796 (>99% sequence identity) for Kurthia senegalensis from Microbeatlas

Aquatic Samples	40
Soil Samples	36
Animal Samples	394
Plant Samples	32
Total Samples	502

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21621]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21621]	Kurthia senegalensis 16S ribosomal RNA gene, partial sequence	JF824796	1476	ENA	1033740 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Kurthia senegalensis JC8E	2548876796	draft	JGI IMG/M	1033740 tax ID	*
[Ref.: #66792]	Kurthia senegalensis JC8E	GCA_000285595	scaffold	GenBank	1033740 tax ID	*

[Ref.: #21621]

GC-content

38.21 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #21621]

Culture collection no.

DSM 24641, CSUR P138

[Ref.: #89059]

SI-ID 399730

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21621

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24641

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89059

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399730.1 )

* These data were automatically processed and therefore are not curated

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