Name: Paenibacillus tibetensis SSB001
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130517

Type strain:

Species: Paenibacillus tibetensis

Strain Designation: SSB001

Culture col. no.: DSM 29321, ACCC 19728

Strain history: <- L. Han, Chinese Acad. Sci. (CAS), Beijing; SSB001

NCBI tax ID(s): 1561923 (species)

SI-ID 400771

DSM 29321

Section

Paenibacillus tibetensis SSB001 is a psychrophilic bacterium that was isolated from soil, alpine swamp meadow.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus tibetensis**
	Full Scientific Name (LPSN)	Paenibacillus tibetensis Han et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21719]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #21719]

Culture medium growth

[Ref.: #21719]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21719]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21719]			growth	20 °C

[Ref.: #21719]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21719]	Sample type/isolated from	soil, alpine swamp meadow
[Ref.: #21719]	Geographic location (country and/or sea, region)	Tibet, Sheglya Mountain (29° 36' 21'' N 94° 36' 23'' E )
[Ref.: #21719]	Country	China
[Ref.: #21719]	Country ISO 3 Code	CHN
[Ref.: #21719]	Continent	Asia
[Ref.: #21719]	Geographic location	29.6058°/94.6064°
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Meadow
#Environmental	#Terrestrial	#Soil
#Environmental	#Terrestrial	#Wetland (Swamp)
#Climate	#Cold	#Alpine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM522843 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	113
Soil Samples	598
Animal Samples	203
Plant Samples	86
Total Samples	1000

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21719]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21719]	Paenibacillus tibetensis strain SSB001 16S ribosomal RNA gene, partial sequence	KM522843	1474	ENA	1561923 tax ID

[Ref.: #21719]

GC-content

40.18 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #21719]

Culture collection no.

DSM 29321, ACCC 19728

[Ref.: #89039]

SI-ID 400771

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus tibetensis sp. nov., a psychrophilic bacterium isolated from alpine swamp meadow soil.	Han LL, He JZ, Zheng YM, Zeng J, Zhang LM	Int J Syst Evol Microbiol	10.1099/ijs.0.000141	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21719

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29321

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89039

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400771.1 )

* These data were automatically processed and therefore are not curated

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