Name: Psychrobacter sanguinis 1501
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130457

Type strain:

Species: Psychrobacter sanguinis

Strain Designation: 1501

Culture col. no.: DSM 23634, CCUG 59768

Strain history: <- W. J. Wolfgang, Wadsworth Center, NYS Dept. of Health, Albany, USA; 1501 <- Strong Memorial Hospital, Rochester

NCBI tax ID(s): 861445 (species)

SI-ID 400067

DSM 23634, CCUG 59768

Other strains from Psychrobacter sanguinis

P. sanguinis 13983, DSM 23635, CCUG 59771, CIP ... (type strain)
P. sanguinis 92, DSM 23636, CCUG 59769
P. sanguinis 10070, DSM 23637, CCUG 59770

Section

Psychrobacter sanguinis 1501 is an aerobe, mesophilic human pathogen that was isolated from human blood, 61-year-old female.

aerobe
human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Psychrobacter*
	Species	**Psychrobacter sanguinis**
	Full Scientific Name (LPSN)	Psychrobacter sanguinis Wirth et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #21742]	Type of hemolysis	gamma
[Ref.: #21742]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21742]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21742]

Culture medium growth

[Ref.: #21742]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21742]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21742]			growth	37 °C
[Ref.: #62099]			growth	37 °C

[Ref.: #21742]	Temperature range	mesophilic
[Ref.: #62099]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62099]

Oxygen tolerance

aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68377]	D-fructose ChEBI	-	builds acid from	* from API NH
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68377]	maltose ChEBI	-	builds acid from	* from API NH
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68377]	sucrose ChEBI	-	builds acid from	* from API NH
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE, API NH
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE, API NH
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68377]		indole ChEBI	no	* from API NH, API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68377]		indole ChEBI	-	* from API NH, API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68377]	beta-galactosidase	-	3.2.1.23	* from API NH, API zym
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE, API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68377]	beta-lactamase	-	3.5.2.6	* from API NH
[Ref.: #21742]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #21742]	cytochrome-c oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68377]	lipase	+		* from API NH
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68377]	tryptophan deaminase	-	4.1.99.1	* from API NH
[Ref.: #68377]	urease	+	3.5.1.5	* from API NH, API 20NE
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #62099]

Fatty acid	Percentage	ECL
C18:1 ω9c	27.1	17.769
C18:2 ω6,9c/C18:0 ANTE	25.9	17.724
C16:1 ω7c	13.3	15.819
C10:0	10.1	10
C12:0 3OH	9.5	13.455
C16:0	6	16
C12:0	2.7	12
C18:0	2.3	18
C11:0	1.3	11
unknown 12.486	1	12.486
C11:0 3OH	0.7	12.441

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #21742]	25031	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #62099]	8587	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #62099]	2405	-	+	-	-	-	+	+	+	+	-	-	+	-
[Ref.: #21742]	6211	-	-	-	-	-	+	+	+	-	-	+	-	-
[Ref.: #21742]	5662	-	-	-	-	-	-	+	+	+	-	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #62099]	4480	-	+	-	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21742]	Sample type/isolated from	human blood, 61-year-old female
[Ref.: #21742]	Geographic location (country and/or sea, region)	Strong Memorial Hospital, Rochester, NY
[Ref.: #21742]	Country	USA
[Ref.: #21742]	Country ISO 3 Code	USA
[Ref.: #21742]	Continent	North America
[Ref.: #21742]	Geographic location	43.2400°/-75.4400°

[Ref.: #62099]	Sample type/isolated from	Human blood,61-yr-old female
[Ref.: #62099]	Sampling date	2008-03-22
[Ref.: #62099]	Geographic location (country and/or sea, region)	NY,Rochester (Oneida County)
[Ref.: #62099]	Country	USA
[Ref.: #62099]	Country ISO 3 Code	USA
[Ref.: #62099]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Human	#Female
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM212665 (>99% sequence identity) for Psychrobacter from Microbeatlas

Aquatic Samples	5137
Soil Samples	2596
Animal Samples	17078
Plant Samples	598
Total Samples	25409

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21742]	Pathogenicity (human)	yes, in single cases
[Ref.: #21742]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21742]	Psychrobacter sanguinis strain 1501 16S ribosomal RNA gene, partial sequence	HM212665	1457	ENA	861445 tax ID

Availability in culture collections External links

[Ref.: #21742]

Culture collection no.

DSM 23634, CCUG 59768

[Ref.: #88986]

SI-ID 400067

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21742

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23634

#62099 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 59768

#68369

Automatically annotated from API 20NE .

#68377

Automatically annotated from API NH .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88986

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400067.1 )

* These data were automatically processed and therefore are not curated

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