Acinetobacter bohemicus (DSM 100419, JCM 18977, KCTC 42081)

Name: Acinetobacter bohemicus (DSM 100419, JCM 18977, KCTC 42081)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130455

Type strain

Culture col. no. DSM 100419 JCM 18977 KCTC 42081 LMG 28467 NCCP 644 1 more

NCBI tax ID(s) 1435036

Special Collections DSMZ CCUG JCM KCTC

History <- KCTC <- I. Ahmed; NCCP-644 I. Ahmed NCCP-644.

Links

Acinetobacter bohemicus DSM 100419 is an aerobe bacterium that was isolated from textile dyeing wastewater treatment pond.

aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 399090

LMG 28467,KCTC 42081,JCM 18977,DSM 100419

@ref 20215

Last LPSN update 2026-02-09 11:31:13

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Moraxellaceae

Genus Acinetobacter

Species Acinetobacter bohemicus

Full scientific name Acinetobacter bohemicus Krizova et al. 2015

Synonyms (1)

Acinetobacter pakistanensis

BacDive ID	Other strains from **Acinetobacter bohemicus** (3)	Type strain
132192	A. bohemicus DSM 102855, CCM 8462, CCUG 63842, CIP 110496, ... (type strain)
156649	A. bohemicus CCUG 63843
156650	A. bohemicus CCUG 63844

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.5
125439	negative	96.7

Colony morphology

21456

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21456	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
21456	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21456	positive	growth	25
63657	positive	growth	30
67770	positive	growth	25

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
63657	aerobe
125439	obligate aerobe	99.3

Spore formation

@ref	Spore formation	Confidence
125438		95.401
125439		97.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
21456	catalase	+	1.11.1.6
21456	cytochrome-c oxidase	-	1.9.3.1
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
21456	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Waste	#Wastewater
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21456	textile dyeing wastewater treatment pond	Kohinoor Mills, Islamabad	Pakistan	PAK	Asia
63657	Textile dyeing wastewater treatment pond	Islamabad,Kohinoor Mills	Pakistan	PAK	Asia
67770	Textile dyeing wastewater from a treatment pond at Kohinoor mills	Islamabad	Pakistan	PAK	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21456	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2675903032 annotated assembly for Acinetobacter bohemicus ANC 5076	scaffold	GCA_900116265	1435036.3	2675903032	1435036	58.39
66792	ASM880227v1 assembly for Acinetobacter bohemicus CCUG 69707	contig	GCA_008802275	1435036.7		1435036	36.34

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21456	Acinetobacter pakistanensis gene for 16S ribosomal RNA, partial sequence	AB916465	1413		1435036

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Acinetobacter bohemicus ANC 5076
NCBI: GCA_900116265

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	97.60	no
125439	motility	BacteriaNetⓘ	yes	63.60	no
125439	gram_stain	BacteriaNetⓘ	negative	96.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acinetobacter bohemicus strain CCUG 69707
PATRIC: 1435036.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	98.35	yes
125438	spore-forming	spore-formingⓘ	no	95.40	no
125438	aerobic	aerobicⓘ	yes	88.32	yes
125438	thermophilic	thermophileⓘ	no	99.48	yes
125438	flagellated	motile2+ⓘ	no	76.64	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Fatty Acid Conjugation Leads to Length-Dependent Antimicrobial Activity of a Synthetic Antibacterial Peptide (Pep19-4LF).	Storck P, Umstatter F, Wohlfart S, Domhan C, Kleist C, Werner J, Brandenburg K, Zimmermann S, Haberkorn U, Mier W, Uhl P.	Antibiotics (Basel)	10.3390/antibiotics9120844	2020
	Conjugation of Polycationic Peptides Extends the Efficacy Spectrum of beta-Lactam Antibiotics.	Werner J, Umstatter F, Bohmann MB, Muller H, Beijer B, Hertlein T, Kaschnitz L, Bram V, Kleist C, Klika KD, Muhlberg E, Braune G, Wohlfart S, Gartner M, Peter S, Zimmermann S, Haberkorn U, Ohlsen K, Brotz-Oesterhelt H, Mier W, Uhl P.	Adv Sci (Weinh)	10.1002/advs.202411406	2024
Pathogenicity	Recombinant AfusinC, an anionic fungal CSalphabeta defensin from Aspergillus fumigatus, exhibits antimicrobial activity against gram-positive bacteria.	Contreras G, Braun MS, Schafer H, Wink M.	PLoS One	10.1371/journal.pone.0205509	2018
	Genomic plasticity and adaptive capacity of the quaternary alkyl-ammonium compound and copper tolerant Acinetobacter bohemicus strain QAC-21b isolated from pig manure.	Pulami D, Schwabe L, Blom J, Schwengers O, Wilharm G, Kampfer P, Glaeser SP.	Antonie Van Leeuwenhoek	10.1007/s10482-022-01805-w	2023
	Degradation of Dioxins and DBF in Urban Soil Microcosms from Lausanne (Switzerland): Functional Performance of Indigenous Bacterial Strains.	Di Martino R, Soudani M, Castiglioni P, Rime C, Gillioz Y, Sartori L, Proust T, Neves Dos Santos F, Lucarini F, Staedler D.	Microorganisms	10.3390/microorganisms13102306	2025
	Co-infection of Fusarium incarnatum FHHS2 and Acinetobacter bohemicus FHHK1 in captive-reared Hilsa shad, Tenualosa ilisha (Hamilton, 1822)	Hoque F, Adhikari S, Das A, Hussan A, Mandal RN, Das A, Sarakara P, Paul BN, Sahoo PK.	Aquac Int	10.1007/s10499-023-01212-6	2024
	[Metagenomic Analysis Provides Insights into Bacterial Communities, Antibiotic Resistomes, and Public Health Risks in the Dongping Lake Reservoir].	Zhang HN, Cui N, Shen HM.	Huan Jing Ke Xue	10.13227/j.hjkx.202005305	2021
	The potential of wastewater monitoring as a novel surveillance tool for early warning of Bordetella pertussis outbreaks.	Fu S, Du X, Xu Z, Li H, Yao H, Tang S, Zhao W, Hao M, Qiu Z, Wang Z.	Emerg Microbes Infect	10.1080/22221751.2025.2528537	2025
Enzymology	Five novel carbapenem-hydrolysing OXA-type beta-lactamase groups are intrinsic in Acinetobacter spp.	Tian J, Zhang G, Ju Y, Tang N, Li J, Jia R, Feng J.	J Antimicrob Chemother	10.1093/jac/dky359	2018
Metabolism	The roles of bacteria in the biochemical changes of chill-stored bighead carp (Aristichthys nobilis): Proteins degradation, biogenic amines accumulation, volatiles production, and nucleotides catabolism.	Liu X, Huang Z, Jia S, Zhang J, Li K, Luo Y.	Food Chem	10.1016/j.foodchem.2018.02.069	2018
	Milk microbiota of Holstein Friesian cattle reared in Lahore: Association with mastitis.	Salman MM, Nawaz M, Yaqub T, Mushtaq MH.	Saudi J Biol Sci	10.1016/j.sjbs.2024.103984	2024
Pathogenicity	Supercarriers of antibiotic resistome in a world's large river.	Wang J, Pan R, Dong P, Liu S, Chen Q, Borthwick AGL, Sun L, Xu N, Ni J.	Microbiome	10.1186/s40168-022-01294-z	2022
	Antioxidant, Cytotoxic, and Antimicrobial Activities of Glycyrrhiza glabra L., Paeonia lactiflora Pall., and Eriobotrya japonica (Thunb.) Lindl. Extracts.	Zhou JX, Braun MS, Wetterauer P, Wetterauer B, Wink M.	Medicines (Basel)	10.3390/medicines6020043	2019
	Liquid and Vapour Phase of Lavandin (Lavandula × intermedia) Essential Oil: Chemical Composition and Antimicrobial Activity.	Garzoli S, Turchetti G, Giacomello P, Tiezzi A, Laghezza Masci V, Ovidi E.	Molecules	10.3390/molecules24152701	2019
	Liquid and Vapor Phase of Four Conifer-Derived Essential Oils: Comparison of Chemical Compositions and Antimicrobial and Antioxidant Properties.	Garzoli S, Masci VL, Caradonna V, Tiezzi A, Giacomello P, Ovidi E.	Pharmaceuticals (Basel)	10.3390/ph14020134	2021
	Comparative Antioxidant and Antimicrobial Activities of Several Conifer Needles and Bark Extracts.	Popescu Stegarus DI, Frum A, Dobrea CM, Cristea R, Gligor FG, Vicas LG, Ionete RE, Sutan NA, Georgescu C.	Pharmaceutics	10.3390/pharmaceutics16010052	2023
	Cynara cardunculus L. var. scolymus L. Landrace "Carciofo Ortano" as a Source of Bioactive Compounds.	Laghezza Masci V, Alicandri E, Antonelli C, Paolacci AR, Marabottini R, Tomassi W, Scarascia Mugnozza G, Tiezzi A, Garzoli S, Vinciguerra V, Vettraino AM, Ovidi E, Ciaffi M.	Plants (Basel)	10.3390/plants13060761	2024
Enzymology	Antimicrobial Testing of Schinus molle (L.) Leaf Extracts and Fractions Followed by GC-MS Investigation of Biological Active Fractions.	Turchetti G, Garzoli S, Laghezza Masci V, Sabia C, Iseppi R, Giacomello P, Tiezzi A, Ovidi E.	Molecules	10.3390/molecules25081977	2020
Genetics	Metagenomics: An Approach for Unraveling the Community Structure and Functional Potential of Activated Sludge of a Common Effluent Treatment Plant.	Vasudeva G, Singh H, Paliwal S, Pinnaka AK.	Front Microbiol	10.3389/fmicb.2022.933373	2022
	A taxonomically unique Acinetobacter strain with proteolytic and hemolytic activities recovered from a patient with a soft tissue injury.	Almuzara M, Traglia GM, Krizova L, Barberis C, Montana S, Bakai R, Tuduri A, Vay C, Nemec A, Ramirez MS.	J Clin Microbiol	10.1128/jcm.02625-14	2015
	From the Mountain to the Valley: Drivers of Groundwater Prokaryotic Communities along an Alpine River Corridor.	Retter A, Haas JC, Birk S, Stumpp C, Hausmann B, Griebler C, Karwautz C.	Microorganisms	10.3390/microorganisms11030779	2023
	Molecular Distillation of Lavender Supercritical Extracts: Physicochemical and Antimicrobial Characterization of Feedstocks and Assessment of Distillates Enriched with Oxygenated Fragrance Components.	Debczak A, Tyskiewicz K, Fekner Z, Kaminski P, Florkowski G, Konkol M, Roj E, Grzegorczyk A, Malm A.	Molecules	10.3390/molecules27051470	2022
	Chromosomal Amplification of the blaOXA-58 Carbapenemase Gene in a Proteus mirabilis Clinical Isolate.	Girlich D, Bonnin RA, Bogaerts P, De Laveleye M, Huang DT, Dortet L, Glaser P, Glupczynski Y, Naas T.	Antimicrob Agents Chemother	10.1128/aac.01697-16	2017
	Genetics of Acquired Antibiotic Resistance Genes in Proteus spp.	Girlich D, Bonnin RA, Dortet L, Naas T.	Front Microbiol	10.3389/fmicb.2020.00256	2020
	Efficacy and Mechanism of Traditional Medicinal Plants and Bioactive Compounds against Clinically Important Pathogens.	Mickymaray S.	Antibiotics (Basel)	10.3390/antibiotics8040257	2019
Genetics	The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences.	Touchon M, Cury J, Yoon EJ, Krizova L, Cerqueira GC, Murphy C, Feldgarden M, Wortman J, Clermont D, Lambert T, Grillot-Courvalin C, Nemec A, Courvalin P, Rocha EP.	Genome Biol Evol	10.1093/gbe/evu225	2014
Phylogeny	Acinetobacter pakistanensis Abbas et al. 2014 is a later heterotypic synonym of Acinetobacter bohemicus Krizova et al. 2014.	Nemec A, Radolfova-Krizova L	Int J Syst Evol Microbiol	10.1099/ijsem.0.001530	2016
Phylogeny	Acinetobacter bohemicus sp. nov. widespread in natural soil and water ecosystems in the Czech Republic.	Krizova L, Maixnerova M, Sedo O, Nemec A.	Syst Appl Microbiol	10.1016/j.syapm.2014.07.001	2014
Phylogeny	Acinetobacter gandensis sp. nov. isolated from horse and cattle.	Smet A, Cools P, Krizova L, Maixnerova M, Sedo O, Haesebrouck F, Kempf M, Nemec A, Vaneechoutte M.	Int J Syst Evol Microbiol	10.1099/ijs.0.068791-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21456	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100419
#63657	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 69707
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acinetobacter bohemicus (DSM 100419, JCM 18977, KCTC 42081)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900116265

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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