Acinetobacter nectaris CCUG 68431 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from Floral nectar of the plant species Muscari comosum.
Gram-negative ovoid-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter nectaris |
| Full scientific name Acinetobacter nectaris Álvarez-Pérez et al. 2013 |
| @ref | Name | Growth | Composition | |
|---|---|---|---|---|
| 42140 | MEDIUM 29- Brain heart agar | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | ||
| 21451 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 21451 | NUTRIENT AGAR (DSMZ Medium 1) | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 121255 | CIP Medium 29 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 30741 | 22653 ChEBI | asparagine | + | carbon source | |
| 30741 | 35391 ChEBI | aspartate | + | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 30741 | 28757 ChEBI | fructose | + | carbon source | |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 30741 | 29987 ChEBI | glutamate | + | carbon source | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 30741 | 25115 ChEBI | malate | + | carbon source | |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 30741 | 37684 ChEBI | mannose | + | carbon source | |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 30741 | 26271 ChEBI | proline | + | carbon source | |
| 30741 | 30031 ChEBI | succinate | + | carbon source | |
| 30741 | 17992 ChEBI | sucrose | + | carbon source | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | taurine degradation | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | tetrahydrofolate metabolism | 92.86 | 13 of 14 | ||
| 66794 | vitamin B1 metabolism | 92.31 | 12 of 13 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | vitamin B6 metabolism | 81.82 | 9 of 11 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | methylglyoxal degradation | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | allantoin degradation | 77.78 | 7 of 9 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | NAD metabolism | 77.78 | 14 of 18 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | purine metabolism | 75.53 | 71 of 94 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | flavin biosynthesis | 73.33 | 11 of 15 | ||
| 66794 | alanine metabolism | 72.41 | 21 of 29 | ||
| 66794 | cysteine metabolism | 72.22 | 13 of 18 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | citric acid cycle | 71.43 | 10 of 14 | ||
| 66794 | sulfate reduction | 69.23 | 9 of 13 | ||
| 66794 | non-pathway related | 68.42 | 26 of 38 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | methionine metabolism | 65.38 | 17 of 26 | ||
| 66794 | pyrimidine metabolism | 64.44 | 29 of 45 | ||
| 66794 | proline metabolism | 63.64 | 7 of 11 | ||
| 66794 | pentose phosphate pathway | 63.64 | 7 of 11 | ||
| 66794 | tryptophan metabolism | 63.16 | 24 of 38 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | leucine metabolism | 61.54 | 8 of 13 | ||
| 66794 | lipid metabolism | 61.29 | 19 of 31 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 58.33 | 7 of 12 | ||
| 66794 | isoprenoid biosynthesis | 57.69 | 15 of 26 | ||
| 66794 | glutathione metabolism | 57.14 | 8 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 57.14 | 4 of 7 | ||
| 66794 | tyrosine metabolism | 57.14 | 8 of 14 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | oxidative phosphorylation | 54.95 | 50 of 91 | ||
| 66794 | lysine metabolism | 54.76 | 23 of 42 | ||
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | ||
| 66794 | urea cycle | 53.85 | 7 of 13 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | arginine metabolism | 50 | 12 of 24 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | glycolysis | 47.06 | 8 of 17 | ||
| 66794 | 3-phenylpropionate degradation | 46.67 | 7 of 15 | ||
| 66794 | d-xylose degradation | 45.45 | 5 of 11 | ||
| 66794 | arachidonic acid metabolism | 44.44 | 8 of 18 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | factor 420 biosynthesis | 40 | 2 of 5 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycine betaine biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | ||
| 66794 | androgen and estrogen metabolism | 37.5 | 6 of 16 | ||
| 66794 | metabolism of disaccharids | 36.36 | 4 of 11 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | chlorophyll metabolism | 33.33 | 6 of 18 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | starch degradation | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | degradation of pentoses | 28.57 | 8 of 28 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | degradation of sugar alcohols | 25 | 4 of 16 | ||
| 66794 | phenol degradation | 25 | 5 of 20 | ||
| 66794 | butanoate fermentation | 25 | 1 of 4 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 23.53 | 4 of 17 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 23.08 | 3 of 13 | ||
| 66794 | ascorbate metabolism | 22.73 | 5 of 22 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 | ||
| 66794 | daunorubicin biosynthesis | 22.22 | 2 of 9 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) | |
| #Host Body-Site | #Plant | #Flower | |
| #Host Body Product | #Plant | #Nectar |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 21451 | Floral nectar of the plant species Muscari comosum | Muscari comosum | Hinojos (Huelva) | Spain | ESP | Europe | |
| 63485 | Floral nectar,plant species Muscari comosum | Huelva | Spain | ESP | Europe | ||
| 121255 | Plant, Floral nectar of wild mediterranean insect-pollinated plants. host plant = Muscari comosum | Hinojos (Huelva, Spain) | Spain | ESP | Europe |
Global distribution of 16S sequence JQ771132 (>99% sequence identity) for Acinetobacter nectaris from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Acin_nect_CIP110549_V2 assembly for Acinetobacter nectaris CIP 110549 | scaffold | 1392540 | 64.99 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 21451 | Acinetobacter nectaris strain SAP 763.2 16S ribosomal RNA gene, partial sequence | JQ771132 | 1498 | 1392540 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771129 | 1498 | 1219382 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771130 | 1499 | 1219382 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771131 | 1498 | 1219382 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771133 | 1498 | 1219382 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771134 | 1498 | 1219382 | ||
| 124043 | Acinetobacter boissieri strain SAP 320.1 16S ribosomal RNA gene, partial sequence. | JQ771135 | 1497 | 1219382 |
| 21451 | GC-content (mol%)36.6 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.30 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 74.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.99 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 96.56 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 80.13 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 95.77 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 99.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 72.37 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| Hydrogel Design Based on Bacterial Exopolysaccharides: The Biomedical Promise of Levan. | Popa AI, Carpa R, Farkas A. | Int J Mol Sci | 10.3390/ijms262210828 | 2025 | |
| Effect of bacteria type and sucrose concentration on levan yield and its molecular weight. | Gonzalez-Garcinuno A, Tabernero A, Sanchez-Alvarez JM, Galan MA, Martin Del Valle EM. | Microb Cell Fact | 10.1186/s12934-017-0703-z | 2017 | |
| Inoculation of pear flowers with Metschnikowia reukaufii and Acinetobacter nectaris enhances attraction of honeybees and hoverflies, but does not increase fruit and seed set. | Colda A, Bossaert S, Verreth C, Vanhoutte B, Honnay O, Keulemans W, Lievens B. | PLoS One | 10.1371/journal.pone.0250203 | 2021 | |
| Pollen-Microbe Interactions in Nectar Weakly Influence Bee Foraging Behavior. | Ekemezie SC, Davis CC, Russo MV, Carpenter LP, Russell AL. | Integr Comp Biol | 10.1093/icb/icaf017 | 2025 | |
| Nitrogen Assimilation Varies Among Clades of Nectar- and Insect-Associated Acinetobacters. | Alvarez-Perez S, Tsuji K, Donald M, Van Assche A, Vannette RL, Herrera CM, Jacquemyn H, Fukami T, Lievens B. | Microb Ecol | 10.1007/s00248-020-01671-x | 2021 | |
| Lactiplantibacillus plantarum dfa1 reduces obesity caused by a high carbohydrate diet by modulating inflammation and gut microbiota. | Ondee T, Pongpirul K, Wongsaroj L, Senaprom S, Wattanaphansak S, Leelahavanichkul A. | Sci Rep | 10.1038/s41598-025-10435-x | 2025 | |
| Demethylation Inhibitor Fungicides Have a Significantly Detrimental Impact on Population Growth and Composition of Nectar Microbial Communities. | Quevedo-Caraballo S, Roldan A, Alvarez-Perez S. | Microb Ecol | 10.1007/s00248-024-02477-x | 2024 | |
| A quantitative survey of the blueberry (Vaccinium spp.) culturable nectar microbiome: variation between cultivars, locations, and farm management approaches. | Rering CC, Rudolph AB, Li QB, Read QD, Munoz PR, Ternest JJ, Hunter CT. | FEMS Microbiol Ecol | 10.1093/femsec/fiae020 | 2024 | |
| Nectar compounds impact bacterial and fungal growth and shift community dynamics in a nectar analog. | Mueller TG, Francis JS, Vannette RL. | Environ Microbiol Rep | 10.1111/1758-2229.13139 | 2023 | |
| Effects of a supplemented diet containing 7 probiotic strains (Honeybeeotic) on honeybee physiology and immune response: analysis of hemolymph cytology, phenoloxidase activity, and gut microbiome. | Robino P, Galosi L, Bellato A, Vincenzetti S, Gonella E, Ferrocino I, Serri E, Biagini L, Roncarati A, Nebbia P, Menzio C, Rossi G. | Biol Res | 10.1186/s40659-024-00533-x | 2024 | |
| Holobiont Urbanism: sampling urban beehives reveals cities' metagenomes. | Henaff E, Najjar D, Perez M, Flores R, Woebken C, Mason CE, Slavin K. | Environ Microbiome | 10.1186/s40793-023-00467-z | 2023 | |
| Melipona stingless bees and honey microbiota reveal the diversity, composition, and modes of symbionts transmission. | Cerqueira AES, Lima HS, Silva LCF, Veloso TGR, de Paula SO, Santana WC, da Silva CC. | FEMS Microbiol Ecol | 10.1093/femsec/fiae063 | 2024 | |
| Wide-ranging consequences of priority effects governed by an overarching factor. | Chappell CR, Dhami MK, Bitter MC, Czech L, Herrera Paredes S, Barrie FB, Calderon Y, Eritano K, Golden LA, Hekmat-Scafe D, Hsu V, Kieschnick C, Malladi S, Rush N, Fukami T. | Elife | 10.7554/elife.79647 | 2022 | |
| Genomic profiling of bacterial and fungal communities and their predictive functionality during pulque fermentation by whole-genome shotgun sequencing. | Chacon-Vargas K, Torres J, Giles-Gomez M, Escalante A, Gibbons JG. | Sci Rep | 10.1038/s41598-020-71864-4 | 2020 | |
| Studies on solvent precipitation of levan synthesized using Bacillus subtilis MTCC 441. | Chidambaram JSCA, Veerapandian B, Sarwareddy KK, Mani KP, Shanmugam SR, Venkatachalam P. | Heliyon | 10.1016/j.heliyon.2019.e02414 | 2019 | |
| Potential effects of nectar microbes on pollinator health. | Martin VN, Schaeffer RN, Fukami T. | Philos Trans R Soc Lond B Biol Sci | 10.1098/rstb.2021.0155 | 2022 | |
| Bacterial communities of indoor surface of stingless bee nests. | de Sousa LP. | PLoS One | 10.1371/journal.pone.0252933 | 2021 | |
| Microbial diversity in the floral nectar of Linaria vulgaris along an urbanization gradient. | Bartlewicz J, Lievens B, Honnay O, Jacquemyn H. | BMC Ecol | 10.1186/s12898-016-0072-1 | 2016 | |
| Opuntia streptacantha: a coadjutor in the treatment of diabetes mellitus. | Meckes-Lozyoa M, Roman-Ramos R. | Am J Chin Med | 10.1142/s0192415x86000181 | 1986 | |
| The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences. | Touchon M, Cury J, Yoon EJ, Krizova L, Cerqueira GC, Murphy C, Feldgarden M, Wortman J, Clermont D, Lambert T, Grillot-Courvalin C, Nemec A, Courvalin P, Rocha EP. | Genome Biol Evol | 10.1093/gbe/evu225 | 2014 | |
| Acinetobacter pollinis sp. nov., Acinetobacter baretiae sp. nov. and Acinetobacter rathckeae sp. nov., isolated from floral nectar and honey bees. | Alvarez-Perez S, Baker LJ, Morris MM, Tsuji K, Sanchez VA, Fukami T, Vannette RL, Lievens B, Hendry TA. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004783 | 2021 | |
| Acinetobacter apis sp. nov., isolated from the intestinal tract of a honey bee, Apis mellifera. | Kim PS, Shin NR, Kim JY, Yun JH, Hyun DW, Bae JW | J Microbiol | 10.1007/s12275-014-4078-0 | 2014 | |
| Acinetobacter nectaris sp. nov. and Acinetobacter boissieri sp. nov., isolated from floral nectar of wild Mediterranean insect-pollinated plants. | Alvarez-Perez S, Lievens B, Jacquemyn H, Herrera CM | Int J Syst Evol Microbiol | 10.1099/ijs.0.043489-0 | 2012 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #21451 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29975 |
| #30741 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27072 (see below) |
| #42140 | ; Curators of the CIP; |
| #63485 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 68431 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68369 | Automatically annotated from API 20NE . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121255 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110549 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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