Plantactinospora veratri (DSM 46718, CGMCC 4.7143, NEAU-FHS4)

Name: Plantactinospora veratri (DSM 46718, CGMCC 4.7143, NEAU-FHS4)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130446

Type strain

Strain Designation NEAU-FHS4

Culture col. no. DSM 46718 CGMCC 4.7143 NEAU-FHS4 JCM 31781

NCBI tax ID(s) 1436122

Special Collections DSMZ JCM

History <- C. Liu, School of Life Science, Harbin,China; NEAU-FHS4 <- H. Xing, School of Life Science, Harbin,China CGMCC 4.7143 <-- C. Liu; Northeast Agric. Univ., China; NEAU-FHS4.

Links

Plantactinospora veratri NEAU-FHS4 is a bacterium that was isolated from root of black false hellebore Veratrum nigrum .

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 399664

DSM 46718

@ref 20215

Last LPSN update 2026-02-09 11:31:13

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Plantactinospora

Species Plantactinospora veratri

Full scientific name Plantactinospora veratri Xing et al. 2015

BacDive ID	Other strains from **Plantactinospora veratri** (1)	Type strain
176943	P. veratri JZT18, DSM 116656

Morphology

Multimedia

@ref:	22072
multimedia content:	DSM_46718.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_46718.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22072	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
22072	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
22072	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22072	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Observation

67770

Observationquinones: MK-10(H₆), MK-10(H₈)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
22072	root of black false hellebore Veratrum nigrum (L.)	Veratrum nigrum	Heilongjiang Province, Wuchang (44° 21' N 127° 99' E)	China	CHN	Asia	44.35	128.65 44.35/128.65
67770	Root of black false hellebore (Veratrum nigrum L.) from Wuchang	Veratrum nigrum	Heilongjiang Province, northern China	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22072	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1464587v1 assembly for Plantactinospora veratri CGMCC 4.7143	contig	GCA_014645875	1436122.3	8109729380	1436122	47.08

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22072	Plantactinospora veratri strain NEAU-FHS4 16S ribosomal RNA gene, partial sequence	KF888635	1508		1436122

GC content

@ref	GC-content (mol%)	Method
22072	73.6	thermal denaturation, midpoint method (Tm)
67770	72.9-74.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Plantactinospora veratri strain CGMCC 4.7143
PATRIC: 1436122.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.60	no
125438	anaerobic	anaerobicⓘ	no	98.21	no
125438	spore-forming	spore-formingⓘ	no	76.88	no
125438	aerobic	aerobicⓘ	yes	59.65	no
125438	thermophilic	thermophileⓘ	no	97.29	no
125438	flagellated	motile2+ⓘ	no	85.55	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Plantactinospora sonchi sp. nov., an actinobacterium isolated from the leaves of common sowthistle (Sonchus oleraceus L.).	Ma Z, Liu C, Fan J, He H, Li C, Li J, Zhao S, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000668	2015
Phylogeny	Plantactinospora veratri sp. nov., an actinomycete isolated from black false hellebore root (Veratrum nigrum L.).	Xing H, Liu C, Zhang Y, Zhao J, Li C, Liu H, Li L, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijs.0.000180	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22072	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46718
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Plantactinospora veratri (DSM 46718, CGMCC 4.7143, NEAU-FHS4)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014645875

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media