Name: Plantactinospora veratri NEAU-FHS4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130446

Type strain:

Species: Plantactinospora veratri

Strain Designation: NEAU-FHS4

Culture col. no.: DSM 46718, CGMCC 4.7143, JCM 31781

Strain history: CGMCC 4.7143 <-- C. Liu; Northeast Agric. Univ., China; NEAU-FHS4.

NCBI tax ID(s): 1436122 (species)

SI-ID 399664

DSM 46718

Section

Plantactinospora veratri NEAU-FHS4 is a mesophilic, Gram-positive bacterium that was isolated from root of black false hellebore Veratrum nigrum .

Gram-positive
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Plantactinospora*
	Species	**Plantactinospora veratri**
	Full Scientific Name (LPSN)	Plantactinospora veratri Xing et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22072]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #22072]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.829

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Observation

quinones: MK-10(H₆), MK-10(H₈)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22072]	Sample type/isolated from	root of black false hellebore Veratrum nigrum (L.)
[Ref.: #22072]	Host species	Veratrum nigrum
[Ref.: #22072]	Geographic location (country and/or sea, region)	Heilongjiang Province, Wuchang (44° 21' N 127° 99' E)
[Ref.: #22072]	Country	China
[Ref.: #22072]	Country ISO 3 Code	CHN
[Ref.: #22072]	Continent	Asia
[Ref.: #22072]	Geographic location	44.3500°/128.6500°

[Ref.: #67770]	Sample type/isolated from	Root of black false hellebore (Veratrum nigrum L.) from Wuchang
[Ref.: #67770]	Host species	Veratrum nigrum
[Ref.: #67770]	Geographic location (country and/or sea, region)	Heilongjiang Province, northern China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22072]	Plantactinospora veratri strain NEAU-FHS4 16S ribosomal RNA gene, partial sequence	KF888635	1508	ENA	1436122 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Plantactinospora veratri strain CGMCC 4.7143	1436122.3	wgs	PATRIC	1436122 tax ID	*

[Ref.: #22072]	GC-content	73.6 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	72.9-74.3 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Plantactinospora veratri strain CGMCC 4.7143 PATRIC: 1436122.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Plantactinospora veratri strain CGMCC 4.7143 PATRIC: 1436122.3
[Ref.: #69480]	motile	no	91.577	no
[Ref.: #69480]	gram-positive	yes	90.648	no
[Ref.: #69480]	anaerobic	no	99.25	no
[Ref.: #69480]	halophile	yes	96.035	no
[Ref.: #69480]	spore-forming	no	93.652	no
[Ref.: #69480]	thermophile	no	99.425	yes
[Ref.: #69480]	glucose-util	yes	88.46	no
[Ref.: #69480]	aerobic	yes	89.794	no
[Ref.: #69480]	flagellated	no	93.519	no
[Ref.: #69480]	glucose-ferment	yes	77.064	no

Availability in culture collections External links

[Ref.: #22072]

Culture collection no.

DSM 46718, CGMCC 4.7143, JCM 31781

[Ref.: #88974]

SI-ID 399664

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Plantactinospora sonchi sp. nov., an actinobacterium isolated from the leaves of common sowthistle (Sonchus oleraceus L.).	Ma Z, Liu C, Fan J, He H, Li C, Li J, Zhao S, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000668	2015	*
Phylogeny	Plantactinospora veratri sp. nov., an actinomycete isolated from black false hellebore root (Veratrum nigrum L.).	Xing H, Liu C, Zhang Y, Zhao J, Li C, Liu H, Li L, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijs.0.000180	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22072

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46718

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#88974

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399664.1 )

* These data were automatically processed and therefore are not curated

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Plantactinospora veratri strain CGMCC 4.7143

Plantactinospora veratri strain CGMCC 4.7143

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