Name: Pseudarthrobacter enclensis NIO-08
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130422

Type strain:

Species: Pseudarthrobacter enclensis

Strain Designation: NIO-08, NIO-1008

Culture col. no.: DSM 25279, NCIM 5488

Strain history: <- S. Dastager, National Institute of Oceanography, Mumbai, India; NIO-1008

NCBI tax ID(s): 993070 (species)

Section

Pseudarthrobacter enclensis NIO-08 is a bacterium that was isolated from marine sediment.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Pseudarthrobacter*
	Species	**Pseudarthrobacter enclensis**
	Full Scientific Name (LPSN)	Pseudarthrobacter enclensis (Dastager et al. 2015) Busse and Schumann 2019

Synonym

Arthrobacter enclensis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %92.501

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %97
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.842

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21485]	Sample type/isolated from	marine sediment
[Ref.: #21485]	Geographic location (country and/or sea, region)	Goa Province, Chorao Island (15°32'34''N 73°55'15'' E)
[Ref.: #21485]	Country	India
[Ref.: #21485]	Country ISO 3 Code	IND
[Ref.: #21485]	Continent	Asia
[Ref.: #21485]	Geographic location	15.5428°/73.9208°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF421614 (>99% sequence identity) for Pseudarthrobacter from Microbeatlas

Aquatic Samples	14
Soil Samples	209
Animal Samples	112
Plant Samples	51
Total Samples	386

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21485]	Arthrobacter enclensis strain NIO-1008 16S ribosomal RNA gene, partial sequence	JF421614	1415	ENA	993070 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudarthrobacter enclensis NIO-1008	GCA_001457025	scaffold	GenBank	993070 tax ID	*
[Ref.: #66792]	Pseudarthrobacter enclensis NIO-1008	GCA_900094675	scaffold	GenBank	993070 tax ID	*
[Ref.: #66792]	Arthrobacter enclensis strain NIO-1008	993070.4	wgs	PATRIC	993070 tax ID	*

[Ref.: #21485]

GC-content

61.3 mol%

fluorimetric

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudarthrobacter enclensis NIO-1008 NCBI: GCA_001457025.1
[Ref.: #69481]	spore-forming	no	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudarthrobacter enclensis NIO-1008 NCBI: GCA_001457025.1
[Ref.: #69480]	flagellated	no	96.2	no
[Ref.: #69480]	gram-positive	yes	93.809	no
[Ref.: #69480]	anaerobic	no	99.661	no
[Ref.: #69480]	aerobic	yes	95.978	no
[Ref.: #69480]	halophile	no	88.684	no
[Ref.: #69480]	spore-forming	no	82.583	no
[Ref.: #69480]	glucose-util	yes	83.014	no
[Ref.: #69480]	motile	no	89.582	no
[Ref.: #69480]	thermophile	no	98.905	no
[Ref.: #69480]	glucose-ferment	no	90.581	no

Availability in culture collections External links

[Ref.: #21485]

Culture collection no.

DSM 25279, NCIM 5488

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Arthrobacter enclensis as Pseudarthrobacter enclensis comb. nov., and emended descriptions of the genus Pseudarthrobacter, and the species Pseudarthrobacter phenanthrenivorans and Pseudarthrobacter scleromae.	Busse HJ, Schumann P	Int J Syst Evol Microbiol	10.1099/ijsem.0.003652	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21485

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25279

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Pseudarthrobacter enclensis NIO-1008

Pseudarthrobacter enclensis NIO-1008

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