Name: Tatumella saanichensis DSM 19846
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130314

Type strain:

Species: Tatumella saanichensis

Culture col. no.: DSM 19846, CCUG 55408, NML 06-3099

Strain history: <- D. M. Tracz and J. Walsh, Public Health Agency of Canada, Winnipeg, Canada <- L. Hoang, British Columbia Centre for Disease Control, Provincial Health Services Authority, Vancouver, Canada <- P. Kibsey, Victoria General Hospital, Victoria, British Columbia, Canada

NCBI tax ID(s): 480813 (species)

SI-ID 406477

DSM 19846, CCUG 55408

Section

Tatumella saanichensis DSM 19846 is an aerobe, mesophilic human pathogen that was isolated from sputum of a cystic fibrosis patient.

aerobe
human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Erwiniaceae*
	Genus	*Tatumella*
	Species	**Tatumella saanichensis**
	Full Scientific Name (LPSN)	Tatumella saanichensis Tracz et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21830]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #21830]

Culture medium growth

[Ref.: #21830]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21830]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21830]			growth	28 °C
[Ref.: #60574]			growth	30 °C

[Ref.: #21830]	Temperature range	mesophilic
[Ref.: #60574]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #60574]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21830]	Sample type/isolated from	sputum of a cystic fibrosis patient
[Ref.: #21830]	Geographic location (country and/or sea, region)	British Columbia
[Ref.: #21830]	Country	Canada
[Ref.: #21830]	Country ISO 3 Code	CAN
[Ref.: #21830]	Continent	North America

[Ref.: #60574]	Sample type/isolated from	Human sputum,16-yr-old man,cystic fibrosis
[Ref.: #60574]	Sampling date	2006-01-01
[Ref.: #60574]	Geographic location (country and/or sea, region)	British Columbia,Victoria Gen.Hos
[Ref.: #60574]	Country	Canada
[Ref.: #60574]	Country ISO 3 Code	CAN
[Ref.: #60574]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Disease	#Cystic fibrosis
#Infection	#Patient	-
#Host Body Product	#Fluids	#Sputum

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU215774 (>99% sequence identity) for Tatumella saanichensis from Microbeatlas

Aquatic Samples	19
Soil Samples	8
Animal Samples	185
Plant Samples	35
Total Samples	247

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21830]	Pathogenicity (human)	yes, in single cases
[Ref.: #21830]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21830]	Tatumella saanichensis strain NML 06-3099 16S ribosomal RNA gene, partial sequence	EU215774	1347	ENA	480813 tax ID

[Ref.: #21830]

GC-content

51.27 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #21830]

Culture collection no.

DSM 19846, CCUG 55408, NML 06-3099

[Ref.: #88847]

SI-ID 406477

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient.	Tracz DM, Gilmour MW, Mabon P, Beniac DR, Hoang L, Kibsey P, Van Domselaar G, Tabor H, Westmacott GR, Corbett CR, Bernard KA	Int J Syst Evol Microbiol	10.1099/ijs.0.000207	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21830

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19846

#60574 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55408

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88847

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406477.1 )

* These data were automatically processed and therefore are not curated

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