Serratia vespertilionis (DSM 28727, CECT 8595, 52)

Multimedia

• @ref:	21778
  multimedia content:	DSM_28727.jpg
  multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_28727.jpg
  intellectual property rights:	© Leibniz-Institut DSMZ
  manual_annotation:	1

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions	external links
66794	citric acid cycle	100	14 of 14
66794	coenzyme A metabolism	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	formaldehyde oxidation	100	3 of 3
66794	enterobactin biosynthesis	100	3 of 3
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	starch degradation	100	10 of 10
66794	vitamin K metabolism	100	5 of 5
66794	ribulose monophosphate pathway	100	2 of 2
66794	gallate degradation	100	5 of 5
66794	biotin biosynthesis	100	4 of 4
66794	adipate degradation	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	L-lactaldehyde degradation	100	3 of 3
66794	threonine metabolism	100	10 of 10
66794	pentose phosphate pathway	100	11 of 11
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	sulfopterin metabolism	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	butanoate fermentation	100	4 of 4
66794	valine metabolism	100	9 of 9
66794	tetrahydrofolate metabolism	100	14 of 14
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ketogluconate metabolism	100	8 of 8
66794	aerobactin biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	taurine degradation	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	ppGpp biosynthesis	100	4 of 4
66794	gluconeogenesis	100	8 of 8
66794	lactate fermentation	100	4 of 4
66794	suberin monomers biosynthesis	100	2 of 2
66794	lipoate biosynthesis	100	5 of 5
66794	heme metabolism	92.86	13 of 14
66794	photosynthesis	92.86	13 of 14
66794	glutathione metabolism	92.86	13 of 14
66794	proline metabolism	90.91	10 of 11
66794	4-hydroxyphenylacetate degradation	90	9 of 10
66794	Entner Doudoroff pathway	90	9 of 10
66794	glutamate and glutamine metabolism	89.29	25 of 28
66794	serine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	4-hydroxymandelate degradation	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	methionine metabolism	88.46	23 of 26
66794	degradation of sugar acids	88	22 of 25
66794	isoleucine metabolism	87.5	7 of 8
66794	degradation of sugar alcohols	87.5	14 of 16
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	purine metabolism	87.23	82 of 94
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	vitamin B1 metabolism	84.62	11 of 13
66794	phenylalanine metabolism	84.62	11 of 13
66794	NAD metabolism	83.33	15 of 18
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	glycogen metabolism	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	pyrimidine metabolism	80	36 of 45
66794	phenol degradation	80	16 of 20
66794	arginine metabolism	79.17	19 of 24
66794	tryptophan metabolism	78.95	30 of 38
66794	allantoin degradation	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	urea cycle	76.92	10 of 13
66794	leucine metabolism	76.92	10 of 13
66794	glycolysis	76.47	13 of 17
66794	alanine metabolism	75.86	22 of 29
66794	glycogen biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	oxidative phosphorylation	73.63	67 of 91
66794	flavin biosynthesis	73.33	11 of 15
66794	3-phenylpropionate degradation	73.33	11 of 15
66794	peptidoglycan biosynthesis	73.33	11 of 15
66794	histidine metabolism	72.41	21 of 29
66794	degradation of hexoses	72.22	13 of 18
66794	degradation of pentoses	71.43	20 of 28
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	non-pathway related	71.05	27 of 38
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	cyanate degradation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	octane oxidation	66.67	2 of 3
66794	tyrosine metabolism	64.29	9 of 14
66794	vitamin B6 metabolism	63.64	7 of 11
66794	metabolism of disaccharids	63.64	7 of 11
66794	carnitine metabolism	62.5	5 of 8
66794	cysteine metabolism	61.11	11 of 18
66794	methylglyoxal degradation	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	lysine metabolism	59.52	25 of 42
66794	lipid metabolism	58.06	18 of 31
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	d-mannose degradation	55.56	5 of 9
66794	nitrate assimilation	55.56	5 of 9
66794	phenylpropanoid biosynthesis	53.85	7 of 13
66794	polyamine pathway	52.17	12 of 23
66794	androgen and estrogen metabolism	50	8 of 16
66794	glycine metabolism	50	5 of 10
66794	cyclohexanol degradation	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	pantothenate biosynthesis	50	3 of 6
66794	phenylmercury acetate degradation	50	1 of 2
66794	toluene degradation	50	2 of 4
66794	kanosamine biosynthesis II	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	myo-inositol biosynthesis	50	5 of 10
66794	d-xylose degradation	45.45	5 of 11
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	ascorbate metabolism	40.91	9 of 22
66794	glycine betaine biosynthesis	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	sulfate reduction	38.46	5 of 13
66794	methane metabolism	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	1,4-dihydroxy-6-naphthoate biosynthesis	33.33	2 of 6
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	phosphatidylethanolamine bioynthesis	30.77	4 of 13
66794	arachidonic acid metabolism	27.78	5 of 18
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	catecholamine biosynthesis	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	bile acid biosynthesis, neutral pathway	23.53	4 of 17

Isolation source categories

Isolation

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21778	Serratia ficaria strain 52 16S ribosomal RNA gene, partial sequence	KJ739885	1428		1521428

GC content

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Serratia vespertilionis (Garcia-Fraile et al. 2015) is a later heterotypic synonym of Serratia ficaria (Grimont et al. 1981).	Garcia-Fraile P, Sproer C, Chesneau O, Criscuolo A, Lang E, Clermont D	Int J Syst Evol Microbiol	10.1099/ijsem.0.003996	2020
Phylogeny	Serratia myotis sp. nov. and Serratia vespertilionis sp. nov., isolated from bats hibernating in caves.	Garcia-Fraile P, Chudickova M, Benada O, Pikula J, Kolarik M	Int J Syst Evol Microbiol	10.1099/ijs.0.066407-0	2014