Pseudomonas mendocina (DSM 50017, ATCC 25411, CCUG 1781)

Name: Pseudomonas mendocina (DSM 50017, ATCC 25411, CCUG 1781)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12866

Type strain

Strain Designation CH50, CH 50

Culture col. no. DSM 50017 ATCC 25411 CCUG 1781 CCUG 12440 CH50 16 more

NCBI tax ID(s) 1215108 300

Special Collections DSMZ CCUG JCM CIP

Links

Pseudomonas mendocina CH50 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from soil, enrichment with ethanol.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 4159

LMG 1223,ATCC 25411,CCUG 12440,CCUG 1781,CECT 320,IFO 14162,IMET 11176,JCM 5966,NCIB 10541,NCTC 10897,VKM B-1299,CCRC 10458,NCIMB 10541,CCM 3590,VKM B-972,CIP 75.21,CFBP 2434,AS 1.1804,NBRC 14162,NCCB 76043,LMD 76.43,BCRC 10458,CCT 0597,ICMP 13540,CGMCC 1.1804,CGMCC 1.2788,VTT E-99945,DSM 50017,KCTC 22636

@ref 20215

Last LPSN update 2025-12-16 09:49:57

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas mendocina

Full scientific name Pseudomonas mendocina Palleroni 1970 (Approved Lists 1980)

Synonyms (1)

Ectopseudomonas mendocina

BacDive ID	Other strains from **Pseudomonas mendocina** (14)	Type strain
100175	P. mendocina STI09280(IMET), LA97, IFO 14913, IMET 9280, ...
131876	P. mendocina S5.2, DSM 102033
134841	P. mendocina CH 67, CIP 75.22
135447	P. mendocina CIP 100027
135691	P. mendocina CH 20, CIP 75.19, ATCC 25412, LMG 5941, NCTC ...
138954	P. mendocina CH 35, CIP 75.20
142349	P. mendocina CCUG 11978
146158	P. mendocina CCUG 30480
146261	P. mendocina CCUG 30728
147011	P. mendocina CCUG 32641
148054	P. mendocina CCUG 34738
150188	P. mendocina CCUG 39226
166063	P. mendocina JCM 9792
166065	P. mendocina JCM 9794

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
120892	negative	rod-shaped
125438			92.333
125438	negative		99.5
125439			92.8
125439	negative		99.7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12606	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
35027	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
120892	CIP Medium 72	Medium recipe at CIP
120892	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
12606	positive	growth	30	mesophilic
35027	positive	growth	30	mesophilic
44420	positive	growth	30-37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
44420	aerobe
120892	obligate aerobe
125438	aerobe	91.999

Spore formation

@ref	Spore formation	Confidence
125439		99.2

Compound production

12606

Compoundpolyhydroxyalkanoic acids

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
120892	17632 ChEBI	nitrate	+	reduction
120892	16301 ChEBI	nitrite	+	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120892	35581 ChEBI	indole
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120892	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
120892	oxidase	+
120892	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
44420	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-
120892	-	+	+	+	+	+	+	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12606	-	-	-	+	-	-	+	-	+	-	-	+	+	-	+	+	+	+	+	-	+
44420	+	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	-	+	+	-	+
12606	+	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	-	+	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
12606	soil, enrichment with ethanol
44420	Soil enriched with ethanol
67770	Soil enrichment with ethanol as carbon source
120892	Environment, Soil enriched with ethanol as carbon source

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12606	2	Risk group (German classification) According to TRBA 466
120892	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	42727_C01 assembly for Ectopseudomonas mendocina NCTC10897	complete	GCA_900636545	300.59	8115585729	300	98.36
66792	ASM81326v1 assembly for Ectopseudomonas mendocina NBRC 14162	contig	GCA_000813265	1215108.3	2627854063	1215108	68.94

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas mendocina strain ATCC 25411 16S ribosomal RNA gene, partial sequence	AF094734	1457	300
20218	Pseudomonas mendocina partial 16S rRNA gene, type strain ICMP 13540T	AJ308310	1349	300
20218	Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile (tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23S rRNA) gene	L28159	702	300
20218	Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile (tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23S rRNA) gene	L28160	705	300
20218	Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile (tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23S rRNA) gene	L28161	705	300
20218	Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile (tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23S rRNA) gene	L28162	707	300
20218	Pseudomonas mendocina 16S ribosomal RNA	M59154	1490	300
20218	Pseudomonas mendocina strain BCRC 10458 16S-23S ribosomal RNA intergenic spacer, complete sequence	EU014574	516	300
20218	P.mendocina (strain DSM 50017T) 16S rRNA gene	Z76674	1451	300
20218	P.mendocina (strain LMG 1223T) 16S rRNA gene	Z76664	1456	300
20218	Pseudomonas mendocina gene for 16S rRNA, partial sequence, strain: NBRC 14162	AB680570	1462	300
20218	Pseudomonas mendocina 16S rRNA gene, complete sequence	D84016	1526	300
124043	Pseudomonas mendocina strain GD30 16S ribosomal RNA gene, partial sequence.	KF928786	1500	300
124043	Pseudomonas mendocina strain ATCC 25411 16S ribosomal RNA gene, partial sequence.	MK265746	1506	300
124043	Pseudomonas mendocina strain NBRC 14162 16S ribosomal RNA gene, partial sequence.	MW111149	609	300

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Pseudomonas mendocina strain NCTC10897
PATRIC: 300.59

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	83.80	no
125439	gram_stain	BacteriaNetⓘ	negative	99.70	no
125439	motility	BacteriaNetⓘ	yes	92.80	no
125439	spore_formation	BacteriaNetⓘ	no	99.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas mendocina NCTC10897
NCBI: GCA_900636545.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.50	no
125438	anaerobic	anaerobicⓘ	no	98.34	yes
125438	aerobic	aerobicⓘ	yes	92.00	no
125438	spore-forming	spore-formingⓘ	no	88.32	no
125438	thermophilic	thermophileⓘ	no	99.49	yes
125438	flagellated	motile2+ⓘ	yes	92.33	no

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	Characterization of three novel dimethyl disulfide degrading bacteria and their potential degradation pathways.	Zheng X, Li Y, Xu J, Zhang Q, Zhang Y.	Bioresour Technol	10.1016/j.biortech.2024.131833	2025
	The characteristics of the novel bacterial strain Pseudomonas mendocina isolated from freshwater aquaculture farm.	Yan K, Wei S, Wang H.	Cell Mol Biol (Noisy-le-grand)	10.14715/cmb/2024.70.5.4	2024
	Bioremediation of polyaromatic hydrocarbon polluted sewage sludge soil employing a bacterial consortium and phytotoxicity evaluation.	Khan G, Tiwari A, Patel DK, Anbumani S, Manickam N.	Lett Appl Microbiol	10.1093/lambio/ovae130	2024
	Multiple Copies of Tigecycline Gene Cluster tmexC6D6-toprJ1b in Pseudomonas mendocina in a Swine Farm.	Wu R, Che Y, Wang L, Chen Q, He B, Qiu J, Wu X, Chen R, Liu Y, Zhou L.	Antibiotics (Basel)	10.3390/antibiotics14050500	2025
Genetics	Characterization and genome-informatic analysis of a novel lytic mendocina phage vB_PmeS_STP12 suitable for phage therapy pseudomonas or biocontrol.	Usman SS, Christina E.	Mol Biol Rep	10.1007/s11033-024-09362-3	2024
	Bioprospecting the Potential of the Microbial Community Associated to Oil-Contaminated Wastewater and Oil Sludge for Hydrocarbon Bioremediation.	Roayaei Ardakani M, Habibi M, Yakhchali B, Mousavi SM.	Indian J Microbiol	10.1007/s12088-024-01352-0	2025
	Plastic bio-mitigation by Pseudomonas mendocina ABF786 and simultaneous conversion of its CO₂ byproduct to microalgal biodiesel.	Jadhav HS, Fulke AB, Dasari LN, Dalai A, Haridevi CK.	Bioresour Technol	10.1016/j.biortech.2023.129952	2024
	Pseudomonas mendocina Isolated from Anopheles Midguts has a Greater Potential to Build Thick Biofilms than Serratia marcescens.	Marques M, Pobre V, Costa SS, Pinto SN, Silveira H.	ACS Omega	10.1021/acsomega.5c01640	2025
	Functional Portrait and Genomic Feature of Carbapenem-Resistant Pseudomonas mendocina Harboring blaNDM-1 and blaIMP-1 in China.	Fang J, Liu Q, Yang J, Kang X, Mei Y, Liu J, Wang G, Xiang T.	Foodborne Pathog Dis	10.1089/fpd.2023.0055	2023
	A Case of Catheter-Associated Urinary Tract Infection by Pseudomonas mendocina in the Setting of COVID-19.	Penney A, Ng C, Sands N, Gaikwad R, Akhter M.	Cureus	10.7759/cureus.68900	2024
	Observed Prevalence and Characterization of Fluoroquinolone-Resistant and Multidrug-Resistant Bacteria in Loggerhead Sea Turtles (Caretta caretta) from the Adriatic Sea.	Lai O, Tinelli A, Soloperto S, Crescenzo G, Galante D, Calarco A, Tribuzio M, Manzulli V, Caioni G, Zizzadoro C, Damiano A, Camarda A, Pugliese N.	Antibiotics (Basel)	10.3390/antibiotics14030252	2025
	Rapid simultaneous removal of nitrogen and phosphorous by a novel isolated Pseudomonas mendocina SCZ-2.	Zhou H, Cheng L, Xia L, Deng G, Zhang Y, Shi X.	Environ Res	10.1016/j.envres.2023.116062	2023
	Effects of bamboo-charcoal modified by bimetallic Fe/Pd nanoparticles on n-hexane biodegradation by bacteria Pseudomonas mendocina NX-1.	Lv S, Zheng F, Wang Z, Dai L, Liu H, Hrynshpan D, Savitskaya T, Chen J.	Chemosphere	10.1016/j.chemosphere.2023.137897	2023
	A human oral commensal-mediated protection against Sjögren's syndrome with maintenance of T cell immune homeostasis and improved oral microbiota.	Tseng YC, Liao KS, Lin WT, Li C, Chang CB, Hsu JW, Chan CP, Chen CM, Wang HP, Chien HC, Wang JT, Hsieh SC, Wu SF.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00654-5	2025
	Biodegradation of polybutylene adipate-co-terephthalate by Priestia megaterium, Pseudomonas mendocina, and Pseudomonas pseudoalcaligenes following incubation in the soil.	Wei S, Zhao Y, Zhou R, Lin J, Su T, Tong H, Wang Z.	Chemosphere	10.1016/j.chemosphere.2022.135700	2022
	Biosynthesis, characterisation and biocompatibility of a unique and elastomeric medium chain-length polyhydroxyalkanoates for kidney glomerular tissue engineering.	Syed Mohamed SMD, Tuffin J, Watson J, Mele A, Fricker A, Gregory DA, Elghazy E, Saleem MA, Satchell SC, Welsh GI, Roy I.	Mater Today Bio	10.1016/j.mtbio.2025.101932	2025
	Incidence, Clinical Profile, and Management of Keratitis Caused by Uncommon Species of Pseudomonas at a Tertiary Eye Care Center.	Thamizhselvi S, Pooja A, Prajna L, Rameshkumar G, Prajna NV, Karpagam R.	Cornea	10.1097/ico.0000000000003194	2023
	Hospital Hygiene Paradox: MRSA and Enterobacteriaceae Colonization Among Cleaning Staff in a Tertiary Hospital in Saudi Arabia.	Alqurashi MS, Sawan AA, Berekaa MM, Hunasemarada BC, Al Shubbar MD, Al Qunais AA, Huldar AS, Bojabara LM, Alamro SA, El-Badry AA.	Medicina (Kaunas)	10.3390/medicina61030384	2025
	Enhanced removal of mixed VOCs with different hydrophobicities by Tween 20 in a biotrickling filter: Kinetic analysis and biofilm characteristics.	Deng Y, Yang G, Lens PNL, He Y, Qie L, Shen X, Chen J, Cheng Z, Chen D.	J Hazard Mater	10.1016/j.jhazmat.2023.131063	2023
Phylogeny	16S rDNA Sequencing for Bacterial Identification in Preterm Infants with Suspected Early-Onset Neonatal Sepsis.	Agudelo-Perez S, Moreno AM, Martinez-Garro J, Salazar J, Lopez R, Perdigon M, Pelaez R.	Trop Med Infect Dis	10.3390/tropicalmed9070152	2024
	UV-irradiated rotifers for the maintenance of gnotobiotic zebrafish larvae.	Marquez Rosales S, Bouchard PI, Olmstead EM, Parthasarathy R.	mSphere	10.1128/msphere.00698-24	2025
Genetics	Wastewater bacteria remediating the pharmaceutical metformin: Genomes, plasmids and products.	Martinez-Vaz BM, Dodge AG, Lucero RM, Stockbridge RB, Robinson AA, Tassoulas LJ, Wackett LP.	Front Bioeng Biotechnol	10.3389/fbioe.2022.1086261	2022
	Enhanced biodegradation of n-hexane in a two-phase partitioning bioreactor inoculated with Pseudomonas mendocina NX-1 under chitosan stimulation.	Chen DZ, Liu HY, Yu Y, Yu NN, Ye JX, Cheng ZW, Zhang SH, Chen JM.	J Hazard Mater	10.1016/j.jhazmat.2021.126330	2021
	Microorganisms and Biochar Improve the Remediation Efficiency of Paspalum vaginatum and Pennisetum alopecuroides on Cadmium-Contaminated Soil.	Liang J, Chang J, Xie J, Yang L, Sheteiwy MS, Moustafa AA, Zaghloul MS, Ren H.	Toxics	10.3390/toxics11070582	2023
Metabolism	Differential expression of proteins in Pseudomonas mendocina SMSKVR-3 under arsenate stress.	Mishra S, Verma SK.	J Basic Microbiol	10.1002/jobm.202000671	2021
	4-4' Diaponeurosporenic Acid, the C₃₀ Carotenoid Pigment in Endophytic Pseudomonas Mendocina with Squalene Cyclase Activity.	Nair IM, Jayachandran K.	Curr Microbiol	10.1007/s00284-020-02180-3	2020
	Simultaneous heterotrophic nitrification and aerobic denitrification by a novel isolated Pseudomonas mendocina X49.	Xie F, Thiri M, Wang H.	Bioresour Technol	10.1016/j.biortech.2020.124198	2021
Enzymology	In Vitro Enzymatic Conversion of Glibenclamide Using Squalene Hopene Cyclase from Pseudomonas mendocina Expressed in E. coli BL21 (DE3).	Nair IM, Jayachandran K.	Mol Biotechnol	10.1007/s12033-020-00264-w	2020
	A Case of Pseudomonas mendocina Bacteremia in an Elderly Man With Bilateral Leg Lesions.	Ezeokoli EU, Polat MU, Ogundipe O, Szela J.	Cureus	10.7759/cureus.17777	2021
Genetics	Genome reduction enhances production of polyhydroxyalkanoate and alginate oligosaccharide in Pseudomonas mendocina.	Fan X, Zhang Y, Zhao F, Liu Y, Zhao Y, Wang S, Liu R, Yang C.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.09.067	2020
	Gut microbiota mitigate the reproductive toxicity of silver nanoparticles through thiamine-derived metabolites.	Gong JX, Wang XL, Lin CX, Li XY, Wu J, Tan QG, Yang L, Miao AJ.	Nat Commun	10.1038/s41467-025-62595-z	2025
	Degradation of polylactic acid/polybutylene adipate-co-terephthalate by coculture of Pseudomonas mendocina and Actinomucor elegans.	Jia H, Zhang M, Weng Y, Li C.	J Hazard Mater	10.1016/j.jhazmat.2020.123679	2021
	Synthetic metabolic pathways for conversion of CO₂ into secreted short-to medium-chain hydrocarbons using cyanobacteria.	Yunus IS, Anfelt J, Sporre E, Miao R, Hudson EP, Jones PR.	Metab Eng	10.1016/j.ymben.2022.01.017	2022
	Pseudomonas mendocina Urinary Tract Infection: A Case Report and Literature Review.	Vo T, Maisuradze N, Maglakelidze D, Kalra T, McFarlane IM.	Cureus	10.7759/cureus.23583	2022
	Highly efficient degradation of polybutylene succinate (PBS) and polycaprolactone (PCL) by a recombinant marine fungal cutinase.	Lang F, Fei F, Sun C, Wu S.	Appl Environ Microbiol	10.1128/aem.00833-25	2025
Phylogeny	A third type of PETase from the marine Halopseudomonas lineage.	Turak O, Gagsteiger A, Upadhyay A, Kriegel M, Salein P, Bohnke-Brandt S, Agarwal S, Borchert E, Hocker B.	Protein Sci	10.1002/pro.70305	2025
	Pseudomonas Acts as a Reservoir of Novel Tigecycline Resistance Efflux Pump tmexC6D6-toprJ1b and tmexCD-toprJ Variants.	Wang CZ, Gao X, Liang XH, Lv LC, Lu LT, Yue C, Cui XX, Yang KE, Lu D, Liu JH, Yang J.	Microbiol Spectr	10.1128/spectrum.00767-23	2023
	Multidrug-Resistant Bacteria in Hospital Wastewater of the Korle Bu Teaching Hospital in Accra, Ghana.	Addae-Nuku DS, Kotey FC, Dayie NT, Osei MM, Tette EM, Debrah P, Donkor ES.	Environ Health Insights	10.1177/11786302221130613	2022
Enzymology	Characterization of a novel bifunctional mannuronan C-5 epimerase and alginate lyase from Pseudomonas mendocina. sp. DICP-70.	Sun M, Sun C, Li T, Li K, Yan S, Yin H.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.02.126	2020
Enzymology	An Improved Spectrophotometric Method for Toluene-4-Monooxygenase Activity.	Baskaran B, Gill TM, Furst AL.	Chemistry	10.1002/chem.202203322	2023
Genetics	Identification, Comparison, and Profiling of Selected Diarrhoeagenic Pathogens from Diverse Water Sources and Human and Animal Faeces Using Whole-Genome Sequencing.	Murei A, Momba MNB.	Microorganisms	10.3390/microorganisms13061373	2025
	Heterologous expression and foldase-assisted refolding of LipGoM, a Pseudomonas lipase from family I.	Garcia-Villegas EL, Hidalgo-Manzano IA, Pardo-Lopez L, Rudino-Pinera E.	Biochem Biophys Rep	10.1016/j.bbrep.2025.102256	2025
	Distinct trajectory of gut microbiota driven by a human oral commensal: insights from a murine study.	Lin WT, Lee SP, Li C, Chang CB, Chien HC, Wang JT, Hsieh SC, Wu SF, Tseng YC.	J Oral Microbiol	10.1080/20002297.2025.2569524	2025
Enzymology	Bacteria involved in biodegradation of creosote PAH - A case study of long-term contaminated industrial area.	Smulek W, Sydow M, Zabielska-Matejuk J, Kaczorek E.	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2019.109843	2020
	Pseudomonas Mendocina Bacteremia in a Hemodialysis Patient With a Central Venous Catheter.	Goldberg ME, Blyth M, Swiatlo E.	Cureus	10.7759/cureus.10853	2020
	C. elegans show Preference for Pseudomonas mendocina (MSPm1) and Proteus mirabilis ( P. mirabilis sp?) , and Repulsion to Pseudomonas lurida (MYb11); Growth on Pseudomonas mendocina (MSPm1) Increases Attraction to 2-nonanone.	Chen AJ, Zuazo C, Mellman K, Chandra R, L'Etoile N.	MicroPubl Biol	10.17912/micropub.biology.000535	2022
Metabolism	Removal of nitrogen by heterotrophic nitrification-aerobic denitrification of a novel halotolerant bacterium Pseudomonas mendocina TJPU04.	He X, Sun Q, Xu T, Dai M, Wei D.	Bioprocess Biosyst Eng	10.1007/s00449-019-02088-8	2019
	Optimization of Siderophore Production in Three Marine Bacterial Isolates along with Their Heavy-Metal Chelation and Seed Germination Potential Determination.	Sarvepalli M, Velidandi A, Korrapati N.	Microorganisms	10.3390/microorganisms11122873	2023
	Emergence of the mobile RND-type efflux pump gene cluster tmexCD1-toprJ1 in Klebsiella pneumoniae clinical isolates in Japan.	Hirabayashi A, Yano H, Yahara K, Aoki S, Sugawara Y, Kajihara T, Shibayama N, Kayama S, Suzuki M, Sugai M.	J Antimicrob Chemother	10.1093/jac/dkae395	2025
	Antibiotic-Resistant Bacteria Dissemination in the Wildlife, Livestock, and Water of Maiella National Park, Italy.	Smoglica C, Vergara A, Angelucci S, Festino AR, Antonucci A, Marsilio F, Di Francesco CE.	Animals (Basel)	10.3390/ani13030432	2023
	Metagenomic analysis of blood microbiota alterations: insights into HIV progression and immune restoration.	Chen Y, Zhang R, Wen J, Zhao J, Zhang J.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1619059	2025
	Quorum sensing in biofilm-mediated heavy metal resistance and transformation: environmental perspectives and bioremediation.	Mondal S, Melzi A, Zecchin S, Cavalca L.	Front Microbiol	10.3389/fmicb.2025.1607370	2025
	Treatment of Medication-Related Osteonecrosis of the Jaw Without and With the Use of Advanced Platelet-Rich Fibrin: A Retrospective Clinical Study.	Adamska P, Stasiak M, Kobusinska N, Bartmanski M, Zedler A, Studniarek M.	J Funct Biomater	10.3390/jfb16050180	2025
Pathogenicity	D-Tryptophan governs biofilm formation rates and bacterial interaction in P. mendocina and S. aureus.	Ghosh S, Qureshi A, Purohit H.	J Biosci	10.1007/s12038-018-9841-7	2019
	A Case of Pseudomonas straminea Blood Stream Infection in an Elderly Woman with Cellulitis.	Bohm L, Schaller ME, Balczun C, Kruger A, Schummel T, Ammon A, Klein N, Helbing DL, Eming R, Fuchs F.	Infect Dis Rep	10.3390/idr16040053	2024
	A Systematic Review of Human Infections by Pseudomonas mendocina.	Ioannou P, Vougiouklakis G.	Trop Med Infect Dis	10.3390/tropicalmed5020071	2020
	A case report of Pseudomonas citronellolis and Escherichia coli isolated from acute suppurative appendicitis: reveals the potential intestinal colonization and pathogenicity of Pseudomonas citronellolis.	Lin Y, Li Y, Lin C.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1280188	2024
	Bioaugmentation treatment of nitrogen-rich wastewater with a denitrifier with biofilm-formation and nitrogen-removal capacities in a sequencing batch biofilm reactor.	Hong P, Wu X, Shu Y, Wang C, Tian C, Wu H, Xiao B.	Bioresour Technol	10.1016/j.biortech.2020.122905	2020
	Comparative analysis of the intestinal microbiome in Rattus norvegicus from different geographies.	Shah T, Hou Y, Jiang J, Shah Z, Wang Y, Li Q, Xu X, Wang Y, Wang B, Xia X.	Front Microbiol	10.3389/fmicb.2023.1283453	2023
	Characterization of a Novel Polysaccharide Lyase Family 5 Alginate Lyase with PolyM Substrate Specificity.	Zhou L, Meng Q, Zhang R, Jiang B, Liu X, Chen J, Zhang T.	Foods	10.3390/foods11213527	2022
	Development of Chimera AMP-Endolysin with Wider Spectra Against Gram-Negative Bacteria Using High-Throughput Assay.	Kogawa M, Yoda T, Matsuhashi A, Matsushita A, Otsuka Y, Shibagaki S, Hosokawa M, Tsuda S.	Viruses	10.3390/v17020200	2025
Genetics	Metagenomics insight into Puga geothermal geyser located in Himalayan Geothermal Belt (Trans-Himalayan Plateau) Ladakh, India.	Kumari S, Choudhary G, Anu K, Devi S.	Braz J Microbiol	10.1007/s42770-024-01408-9	2024
Metabolism	Filling in the Gaps in Metformin Biodegradation: a New Enzyme and a Metabolic Pathway for Guanylurea.	Tassoulas LJ, Robinson A, Martinez-Vaz B, Aukema KG, Wackett LP.	Appl Environ Microbiol	10.1128/aem.03003-20	2021
	Greening the Production of Indigo Blue Exploiting Light and a Recombinant Synechocystis sp. PCC6803 Strain Expressing the Enzyme mFMO.	Loprete G, Rubert D, Bellusci F, Loncar N, Fraaije MW, Bergantino E.	Microb Biotechnol	10.1111/1751-7915.70146	2025
	Metformin hydrolase is a recently evolved nickel-dependent heteromeric ureohydrolase.	Sinn M, Riede L, Fleming JR, Funck D, Lutz H, Bachmann A, Mayans O, Hartig JS.	Nat Commun	10.1038/s41467-024-51752-5	2024
	In silico characterization and over-expression of squalene hopene cyclase from Pseudomonas mendocina.	Nair IM, Kochupurakal J.	3 Biotech	10.1007/s13205-019-1901-7	2019
Genetics	Comparative metagenomic analysis from Sundarbans ecosystems advances our understanding of microbial communities and their functional roles.	Das BK, Chakraborty HJ, Kumar V, Rout AK, Patra B, Das SK, Behera BK.	Sci Rep	10.1038/s41598-024-67240-1	2024
Genetics	Selective enrichment of bacterial pathogens by microplastic biofilm.	Wu X, Pan J, Li M, Li Y, Bartlam M, Wang Y.	Water Res	10.1016/j.watres.2019.114979	2019
	Optimizing biodiesel production from Madhuca indica oil using marine bacteria as a whole-cell biocatalyst: engine testing and performance analysis.	Rahul S, Azeez MKA, Nithyanand P, Arumugam A.	Biotechnol Biofuels Bioprod	10.1186/s13068-025-02642-5	2025
Enzymology	Isolation, purification and characterization of a pH tolerant and temperature stable proteinaceous protease inhibitor from marine Pseudomonas mendocina.	Sapna K, Manzur Ali PP, Rekha Mol KR, Bhat SG, Chandrasekaran M, Elyas KK.	Biotechnol Lett	10.1007/s10529-017-2424-0	2017
Metabolism	Cyanotrophic and arsenic oxidizing activities of Pseudomonas mendocina P6115 isolated from mine tailings containing high cyanide concentration.	Miranda-Carrazco A, Vigueras-Cortes JM, Villa-Tanaca L, Hernandez-Rodriguez C.	Arch Microbiol	10.1007/s00203-018-1514-2	2018
	Isolation, purification and characterization of a pH tolerant and temperature stable proteinaceous protease inhibitor from marine Pseudomonas mendocina	Sapna K, Manzur Ali PP, Rekha Mol KR, Bhat S, Chandrasekaran M, Elyas KK.	Biotechnol Lett		2017
Genetics	Microbial species pool-mediated diazotrophic community assembly in crop microbiomes during plant development.	Xiong C, K Singh B, Zhu Y-G, Hu H-W, Li P-P, Han Y-L, Han L-L, Zhang Q-B, Wang J-T, Liu S-Y, Wu C-F, Ge A-H, Zhang L-M, He J-Z.	mSystems	10.1128/msystems.01055-23	2024
	Characterization and properties of the biosurfactant produced by PAH-degrading bacteria isolated from contaminated oily sludge environment.	Tripathi V, Gaur VK, Dhiman N, Gautam K, Manickam N.	Environ Sci Pollut Res Int	10.1007/s11356-019-05591-3	2020
Enzymology	Pseudomonas aeruginosa promoted microbial fuel cells for cytidine acid production wastewater treatment.	Yin X, Wang F, Ge M, Zhang F, Liang G.	Sci Rep	10.1038/s41598-025-90361-0	2025
Metabolism	Aerobic Biodegradation of OCDD by P. Mendocina NSYSU: Effectiveness and Gene Inducement Studies.	Lin JL, Lin WC, Liu JK, Surampalli RY, Zhang TC, Kao CM.	Water Environ Res	10.2175/106143017x15054988926415	2017
Enzymology	A cryogel-based bioreactor for water treatment applications.	Berillo DA, Caplin JL, Cundy AB, Savina IN.	Water Res	10.1016/j.watres.2019.01.028	2019
	Bioprospecting for polyesterase activity relevant for PET degradation in marine Enterobacterales isolates.	Galarza-Verkovitch D, Turak O, Wiese J, Rahn T, Hentschel U, Borchert E.	AIMS Microbiol	10.3934/microbiol.2023027	2023
Enzymology	The influences of substrates' physical properties on enzymatic PET hydrolysis: Implications for PET hydrolase engineering.	Pasula RR, Lim S, Ghadessy FJ, Sana B.	Eng Biol	10.1049/enb2.12018	2022
Pathogenicity	Caenorhabditis elegans as a Convenient Animal Model for Microbiome Studies	Wu C, Davis S, Saudagar N, Shah S, Zhao W, Stern A, Martel J, Ojcius D, Yang H.	Int J Mol Sci		2024
	Clinical and Histopathological Aspects of MRONJ in Cancer Patients.	Ciobanu GA, Mogoanta L, Camen A, Ionescu M, Vlad D, Staicu IE, Munteanu CM, Gheorghita MI, Mercut R, Sin EC, Popescu SM.	J Clin Med	10.3390/jcm12103383	2023
Enzymology	Pseudomonas Mendocina Bacteremia: A Case Study and Review of Literature.	Gani M, Rao S, Miller M, Scoular S.	Am J Case Rep	10.12659/ajcr.914360	2019
	Poly(lactic acid) Degradation by Recombinant Cutinases from Aspergillus nidulans.	Alvarado E, Castro R, Castro-Rodriguez JA, Navarro A, Farres A.	Polymers (Basel)	10.3390/polym16141994	2024
	Two types of microorganisms isolated from petroleum hydrocarbon pollutants: Degradation characteristics and metabolic pathways analysis of petroleum hydrocarbons.	Yin X, Wang X, Qiu M, Shao W, Ai M, Liang G.	PLoS One	10.1371/journal.pone.0312416	2024
Metabolism	Efficient nitrogen removal via simultaneous ammonium assimilation and heterotrophic denitrification of Paracoccus denitrificans R-1.	Sun W, Hu C, Wu J, Wei M, Lin JG, Hong Y.	iScience	10.1016/j.isci.2024.110599	2024
	A natural bacterial pathogen of C. elegans uses a small RNA to induce transgenerational inheritance of learned avoidance.	Sengupta T, St Ange J, Kaletsky R, Moore RS, Seto RJ, Marogi J, Myhrvold C, Gitai Z, Murphy CT.	PLoS Genet	10.1371/journal.pgen.1011178	2024
	A Comparative Analysis of the Stomach, Gut, and Lung Microbiomes in Rattus norvegicus.	Shah T, Wang Y, Wang Y, Li Q, Zhou J, Hou Y, Wang B, Xia X.	Microorganisms	10.3390/microorganisms11092359	2023
Metabolism	Efficient production of polyhydroxyalkanoates (PHAs) from Pseudomonas mendocina PSU using a biodiesel liquid waste (BLW) as the sole carbon source.	Chanasit W, Hodgson B, Sudesh K, Umsakul K.	Biosci Biotechnol Biochem	10.1080/09168451.2016.1158628	2016
	Biodiesel Production from Waste Cooking Oil Using Recombinant Escherichia coli Cells Immobilized into Fe₃O₄-Chitosan Magnetic Microspheres.	Zhao Z, Han M, Zhou L, Wang C, Lin J, Du X, Cai J.	Molecules	10.3390/molecules29153469	2024
	Bioleaching of lanthanum from nickel metal hydride dry battery using siderophores produced by Pseudomonas sp.	Hegazy AS, Soliman HM, Mowafy AM, Mohamedin AH.	World J Microbiol Biotechnol	10.1007/s11274-025-04250-9	2025
	Enhancement of medium-chain-length polyhydroxyalkanoates biosynthesis from glucose by metabolic engineering in Pseudomonas mendocina	Wang Y, Zhao F, Fan X, Wang S, Song C.	Biotechnol Lett		2016
Metabolism	Synthetic metabolic pathways for photobiological conversion of CO₂ into hydrocarbon fuel.	Yunus IS, Wichmann J, Wordenweber R, Lauersen KJ, Kruse O, Jones PR.	Metab Eng	10.1016/j.ymben.2018.08.008	2018
	Improved polycyclic aromatic hydrocarbon degradation in a crude oil by individual and a consortium of bacteria.	Kumari S, Regar RK, Manickam N.	Bioresour Technol	10.1016/j.biortech.2018.01.075	2018
Genetics	Environmental Potential for Microbial 1,4-Dioxane Degradation Is Sparse despite Mobile Elements Playing a Role in Trait Distribution.	Goff KL, Hug LA.	Appl Environ Microbiol	10.1128/aem.02091-21	2022
Metabolism	Enhancement of medium-chain-length polyhydroxyalkanoates biosynthesis from glucose by metabolic engineering in Pseudomonas mendocina.	Wang Y, Zhao F, Fan X, Wang S, Song C.	Biotechnol Lett	10.1007/s10529-015-1980-4	2016
	Catheter irrigation as an unutilized novelty in the treatment of water-based paint injection injuries - a case illustration.	Shubashri J, Angus MD.	JPRAS Open	10.1016/j.jpra.2021.08.004	2021
	Lipolytic activity of carotenogenic yeast isolated from the polish ecosystem.	Kot AM, Buczynski P, Pobiega K, Gientka I, Blazejak S.	Antonie Van Leeuwenhoek	10.1007/s10482-025-02115-7	2025
Metabolism	Comparative investigation on a hexane-degrading strain with different cell surface hydrophobicities mediated by starch and chitosan.	Chen DZ, Jiang NX, Ye JX, Cheng ZW, Zhang SH, Chen JM.	Appl Microbiol Biotechnol	10.1007/s00253-017-8100-4	2017
	Acquired bla_VIM and bla_GES Carbapenemase-Encoding Genes in Pseudomonas aeruginosa: A Seven-Year Survey Highlighting an Increasing Epidemiological Threat.	Martinez-Zavaleta MG, Fernandez-Rodriguez D, Hernandez-Duran M, Colin-Castro CA, de Lourdes Garcia-Hernandez M, Becerra-Lobato N, Franco-Cendejas R, Lopez-Jacome LE.	Pathogens	10.3390/pathogens12101256	2023
Metabolism	Optimization of medium composition for 3-hydroxycarboxylic acid production by Pseudomonas mendocina-biodegraded polyhydroxybutyrate.	Wang Z, Mao H, Liu H, Su T, Jiang H.	Biotechnol Appl Biochem	10.1002/bab.1257	2015
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	Rhizobacteria from vineyard and commercial arbuscular mycorrhizal fungi induce synergistic microbiome shifts within grapevine root systems.	Darriaut R, Lailheugue V, Wastin J, Tran J, Martins G, Ballestra P, Masneuf-Pomarede I, Ollat N, Lauvergeat V.	Sci Rep	10.1038/s41598-025-12673-5	2025
Enzymology	Acid stable alpha-amylase from Pseudomonas balearica VITPS19-Production, purification and characterization.	Kizhakedathil MPJ, C SD.	Biotechnol Rep (Amst)	10.1016/j.btre.2021.e00603	2021
Metabolism	Emulating structural stability of Pseudomonas mendocina lipase: in silico mutagenesis and molecular dynamics studies.	Saravanan P, Dubey VK, Patra S.	J Mol Model	10.1007/s00894-014-2501-4	2014
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Metabolism	Enhanced anaerobic biodegradation of OCDD-contaminated soils by Pseudomonas mendocina NSYSU: microcosm, pilot-scale, and gene studies.	Tu YT, Liu JK, Lin WC, Lin JL, Kao CM.	J Hazard Mater	10.1016/j.jhazmat.2014.06.014	2014
	Purification and characterization of two extracellular polyhydroxyalkanoate depolymerases from Pseudomonas mendocina	Mao H, Jiang H, Su T, Wang Z.	Biotechnol Lett		2013
Phylogeny	Biodeterioration of Microplastics by Bacteria Isolated from Mangrove Sediment.	Ren SY, Ni HG.	Toxics	10.3390/toxics11050432	2023
	Microbiome of Free-Living Amoebae (FLA) Isolated from Fresh Organic Produce: Potential Risk to Consumers?	Soler L, Moreno Y, Moreno-Mesonero L, Amoros I, Alonso JL, Ferrus MA.	Foods	10.3390/foods12163102	2023
Enzymology	Purification and characterization of two extracellular polyhydroxyalkanoate depolymerases from Pseudomonas mendocina.	Mao H, Jiang H, Su T, Wang Z.	Biotechnol Lett	10.1007/s10529-013-1288-1	2013
	Functionally coherent transcriptional responses of Jatropha curcas and Pseudomonas fragi for rhizosphere mediated degradation of pyrene.	Singha LP, Singha KM, Pandey P.	Sci Rep	10.1038/s41598-024-51581-y	2024
Pathogenicity	Calcium-mediated modulation of Pseudomonas mendocina NR802 biofilm influences the phenanthrene degradation.	Mangwani N, Shukla SK, Rao TS, Das S.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2013.10.003	2014
	Antibiotic Resistance of Bacteria Isolated from Clinical Samples and Organs of Rescued Loggerhead Sea Turtles (Caretta caretta) in Southern Italy.	Esposito E, Pace A, Affuso A, Oliviero M, Iaccarino D, Paduano G, Maffucci F, Fusco G, De Carlo E, Hochscheid S, Di Nocera F.	Animals (Basel)	10.3390/ani14142103	2024
Metabolism	Higher-Order Interactions Dampen Pairwise Competition in the Zebrafish Gut Microbiome.	Sundarraman D, Hay EA, Martins DM, Shields DS, Pettinari NL, Parthasarathy R.	mBio	10.1128/mbio.01667-20	2020
	Biodegradation of P(3HB-co-4HB) powder by Pseudomonas mendocina for preparation low-molecular-mass P(3HB-co-4HB).	Gao Z, Su T, Li P, Wang Z.	3 Biotech	10.1007/s13205-017-0824-4	2017
Enzymology	Pseudomonas mendocina native valve infective endocarditis: a case report.	Rapsinski GJ, Makadia J, Bhanot N, Min Z.	J Med Case Rep	10.1186/s13256-016-1057-6	2016
Enzymology	T4 lysozyme fused with cellulose-binding module for antimicrobial cellulosic wound dressing materials.	Abouhmad A, Mamo G, Dishisha T, Amin MA, Hatti-Kaul R.	J Appl Microbiol	10.1111/jam.13146	2016
	Biotic interactions between the human pathogen Legionella pneumophila and nematode grazers in cooling tower biofilms.	Ortlieb C, Labrosse A, Ruess L, Steinert M.	PLoS One	10.1371/journal.pone.0309820	2024
Biotechnology	Harnessing the bioremediation potential of indigenous Pseudomonas stutzeri for textile effluent treatment: a mechanistic insight.	Bhayana T, Gupta S, Dubey AK.	Sci Rep	10.1038/s41598-025-23952-6	2025
	Degradation and conversion of endosulfan by newly isolated Pseudomonas mendocina ZAM1 strain.	Mir ZA, Ali S, Tyagi A, Ali A, Bhat JA, Jaiswal P, Qari HA, Oves M.	3 Biotech	10.1007/s13205-017-0823-5	2017
	Photoassisted Biodegradation of Irradiated Organics in Simulated Nuclear Wastewater.	Makgato SS, Nkhalambayausi-Chirwa EM.	Water Environ Res	10.2175/106143015x14212658614117	2015
	Impact of Plant Growth-Promoting Microorganism (PGPM) Consortium on Biochemical Properties and Yields of Tomato Under Drought Stress.	Krishna R, Ansari WA, Altaf M, Jaiswal DK, Pandey S, Singh AK, Kumar S, Verma JP.	Life (Basel)	10.3390/life14101333	2024
Metabolism	Isolation and Characterization of Bacteria That Use Furans as the Sole Carbon Source.	Lee SA, Wrona LJ, Cahoon AB, Crigler J, Eiteman MA, Altman E.	Appl Biochem Biotechnol	10.1007/s12010-015-1859-9	2016
	Sequential Treatment by Ozonation and Biodegradation of Pulp and Paper Industry Wastewater to Eliminate Organic Contaminants.	Amacosta J, Poznyak T, Siles S, Chairez I.	Toxics	10.3390/toxics12020138	2024
Biotechnology	Versatile biocatalyst: lipase from Streptomyces gobitricini for ester synthesis and detergent innovation	Alzahrani A, Krayem N, Alonazi M, Al-Ghamdi J, Horchani H, Ben Bacha A.	Front Bioeng Biotechnol		2025
Phylogeny	Enriched microbial consortia from natural environments reveal core groups of microbial taxa able to degrade terephthalate and terphthalamide.	Schaerer LG, Aloba S, Wood E, Olson AM, Valencia IB, Ong RG, Techtmann SM.	PLoS One	10.1371/journal.pone.0315432	2024
	Environmental Health and Safety Implications of the Interplay Between Microplastics and the Residing Biofilm.	Wu X, He F, Xu X, Wu L, Rong J, Lin S.	Environ Health (Wash)	10.1021/envhealth.4c00148	2025
Enzymology	Nitric oxide removal by wastewater bacteria in a biotrickling filter.	Niu H, Leung DY, Wong C, Zhang T, Chan M, Leung FC.	J Environ Sci (China)	10.1016/s1001-0742(13)60456-8	2014
Metabolism	Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing.	Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeno MI, Vogelsang R, Konig C, Luque-Almagro VM, Roldan MD, Sczyrba A, Moreno-Vivian C, Blasco R, Puhler A, Schluter A.	J Biotechnol	10.1016/j.jbiotec.2016.04.008	2016
Enzymology	The isolation and functional identification on producing cellulase of Pseudomonas mendocina.	Zhang J, Hou H, Chen G, Wang S, Zhang J.	Bioengineered	10.1080/21655979.2016.1227143	2016
	An atlas of the tissue and blood metagenome in cancer reveals novel links between bacteria, viruses and cancer.	Borchmann S.	Microbiome	10.1186/s40168-021-01039-4	2021
Enzymology	Characterization of the ability to form biofilms by plant-associated Pseudomonas species.	Ueda A, Saneoka H.	Curr Microbiol	10.1007/s00284-014-0749-7	2015
	A case of an atypical femoral fracture associated with bacterial biofilm--pathogen or bystander?	Howe TS, Ehrlich GD, Koh JS, Ng AC, Costerton W.	Osteoporos Int	10.1007/s00198-012-2222-4	2013
	Beta-Lactam Antibiotic Resistance Genes in the Microbiome of the Public Transport System of Quito, Ecuador.	Hernandez-Alomia F, Bastidas-Caldes C, Ballesteros I, Tenea GN, Jarrin-V P, Molina CA, Castillejo P.	Int J Environ Res Public Health	10.3390/ijerph20031900	2023
	Microbe- plant interaction as a sustainable tool for mopping up heavy metal contaminated sites.	Sorour AA, Khairy H, Zaghloul EH, Zaghloul HAH.	BMC Microbiol	10.1186/s12866-022-02587-x	2022
Metabolism	[Screening, denitrification characteristics, and anaerobic ammonium oxidation ability of denitrifying bacterium aHD7].	Chu SY, Jiang HX, Xiao JB, Shan SD.	Ying Yong Sheng Tai Xue Bao		2012
Phylogeny	Integrating short- and full-length 16S rRNA gene sequencing to elucidate microbiome profiles in Pacific white shrimp (Litopenaeus vannamei) ponds.	Rajonhson DM, Angthong P, Thepsuwan T, Sutheeworapong S, Satanwat P, Tapaneeyaworawong P, Powtongsook S, Kruasuwan W, Jenjaroenpun P, Wongsurawat T, Chaiyapechara S, Rungrassamee W.	Microbiol Spectr	10.1128/spectrum.00965-24	2024
	Carbapenem-Resistant Organisms Isolated in Surgical Site Infections in Benin: A Public Health Problem.	Yehouenou CL, Soleimani R, Kpangon AA, Simon A, Dossou FM, Dalleur O.	Trop Med Infect Dis	10.3390/tropicalmed7080200	2022
	The Role of Pseudomonas aeruginosa in the Pathogenesis of Corneal Ulcer, Its Associated Virulence Factors, and Suggested Novel Treatment Approaches.	Badger-Emeka L, Emeka P, Thirugnanasambantham K, Alatawi AS.	Pharmaceutics	10.3390/pharmaceutics16081074	2024
	Microbial cell factories based on filamentous bacteria, yeasts, and fungi.	Ding Q, Ye C.	Microb Cell Fact	10.1186/s12934-023-02025-1	2023
	A Bioinformatics Tool for Identifying Intratumoral Microbes from the ORIEN Dataset.	Wang C, Ma A, Li Y, McNutt ME, Zhang S, Zhu J, Hoyd R, Wheeler CE, Robinson LA, Chan CHF, Zakharia Y, Dodd RD, Ulrich CM, Hardikar S, Churchman ML, Tarhini AA, Singer EA, Ikeguchi AP, McCarter MD, Denko N, Tinoco G, Husain M, Jin N, Osman AEG, Eljilany I, Tan AC, Coleman SS, Denko L, Riedlinger G, Schneider BP, Spakowicz D, Ma Q, exORIEN Consortium.	Cancer Res Commun	10.1158/2767-9764.crc-23-0213	2024
Phylogeny	Bacterial community analysis in chlorpyrifos enrichment cultures via DGGE and use of bacterial consortium for CP biodegradation.	Akbar S, Sultan S, Kertesz M.	World J Microbiol Biotechnol	10.1007/s11274-014-1699-8	2014
	A case of unusual Gram-negative bacilli septic arthritis in an immunocompetent patient.	Chiu LQ, Wang W.	Singapore Med J	10.11622/smedj.2013162	2013
Enzymology	Pseudo-outbreak of Pseudomonas mendocina in stem cell cultures.	Tschudin Sutter S, Halter J, Frei R, Widmer AF.	J Hosp Infect	10.1016/j.jhin.2010.08.008	2011
Enzymology	Poly-3-hydroxyoctanoate P(3HO), a medium chain length polyhydroxyalkanoate homopolymer from Pseudomonas mendocina.	Rai R, Yunos DM, Boccaccini AR, Knowles JC, Barker IA, Howdle SM, Tredwell GD, Keshavarz T, Roy I.	Biomacromolecules	10.1021/bm2001999	2011
Enzymology	Optimization of Enzymatic Transesterification of Acid Oil for Biodiesel Production Using a Low-Cost Lipase: The Effect of Transesterification Conditions and the Synergy of Lipases with Different Regioselectivity.	Moschona A, Spanou A, Pavlidis IV, Karabelas AJ, Patsios SI.	Appl Biochem Biotechnol	10.1007/s12010-024-04941-3	2024
Enzymology	Characterization of an extracellular alkaline lipase from Pseudomonas mendocina M-37.	Dahiya P, Arora P, Chaudhury A, Chand S, Dilbaghi N.	J Basic Microbiol	10.1002/jobm.200900377	2010
	Enhanced Bioremediation of Aged Polycyclic Aromatic Hydrocarbons in Soil Using Immobilized Microbial Consortia Combined with Strengthening Remediation Strategies.	Zhou H, Gao X, Wang S, Zhang Y, Coulon F, Cai C.	Int J Environ Res Public Health	10.3390/ijerph20031766	2023
Metabolism	Characteristics of an aerobic denitrifier that utilizes ammonium and nitrate simultaneously under the oligotrophic niche.	Zhu L, Ding W, Feng LJ, Dai X, Xu XY.	Environ Sci Pollut Res Int	10.1007/s11356-012-0822-3	2012
Enzymology	First description of bla IMP-8 in a Pseudomonas mendocina isolated at the Hospital Infante D. Pedro, Aveiro, Portugal.	Santos C, Caetano T, Ferreira S, Mendo S.	Res Microbiol	10.1016/j.resmic.2010.03.004	2010
Genetics	Emergence of IMP-8-Producing Comamonas thiooxydans Causing Urinary Tract Infection in China.	Guo X, Wang Q, Xu H, He X, Guo L, Liu S, Wen P, Gou J.	Front Microbiol	10.3389/fmicb.2021.585716	2021
Metabolism	Influence of growth substrate and contaminant mixtures on the degradation of BTEX and MTBE by Rhodococcus rhodochrous ATCC strain 21198.	Huizenga JM, Semprini L.	Biodegradation	10.1007/s10532-023-10037-2	2023
	Identification and characterization of bacteria isolated from patients with cystic fibrosis in Jordan.	Alshraiedeh N, Atawneh F, Bani-Salameh R, Alsharedeh R, Al Tall Y, Alsaggar M.	Ann Med	10.1080/07853890.2022.2131282	2022
	Naphthalene degradation studies using Pseudomonas sp. strain SA3 from Alang-Sosiya ship breaking yard, Gujarat.	Tirkey SR, Ram S, Mishra S.	Heliyon	10.1016/j.heliyon.2021.e06334	2021
	A chimeric membrane enzyme and an engineered whole-cell biocatalyst for efficient 1-alkene production.	Iqbal T, Murugan S, Das D.	Sci Adv	10.1126/sciadv.adl2492	2024
Metabolism	[Isolation, identification and soil remediation of fomesafen-degrading strain FB8].	Yang F, Liu L, Liu C, Li Y, Yu H, Song F, Geng G.	Wei Sheng Wu Xue Bao		2011
	Anaerobic digestion of commercial PLA and PBAT biodegradable plastic bags: Potential biogas production and ¹H NMR and ATR-FTIR assessed biodegradation.	Alvarez-Mendez SJ, Ramos-Suarez JL, Ritter A, Mata Gonzalez J, Camacho Perez A.	Heliyon	10.1016/j.heliyon.2023.e16691	2023
Enzymology	Purification and kinetics of the PHB depolymerase of Microbacterium paraoxydans RZS6 isolated from a dumping yard.	Sayyed RZ, Wani SJ, Alyousef AA, Alqasim A, Syed A, El-Enshasy HA.	PLoS One	10.1371/journal.pone.0212324	2019
	Pseudomonas entomophila and Pseudomonas mendocina: potential models for studying the bacterial type VI secretion system.	Sarris PF, Scoulica EV.	Infect Genet Evol	10.1016/j.meegid.2011.04.029	2011
	Engineering Vibrio alginolyticus as a novel chassis for PHB production from starch.	Li HF, Tian L, Lian G, Fan LH, Li ZJ.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1130368	2023
	Rapid evolution of a novel protective symbiont into keystone taxon in Caenorhabditis elegans microbiota.	Wu-Chuang A, Bates KA, Obregon D, Estrada-Pena A, King KC, Cabezas-Cruz A.	Sci Rep	10.1038/s41598-022-18269-7	2022
	Metagenomic Analysis of Bacterial Communities in Agricultural Soils from Vietnam with Special Attention to Phosphate Solubilizing Bacteria.	Hegyi A, Nguyen TBK, Posta K.	Microorganisms	10.3390/microorganisms9091796	2021
	Dissemination of Carbapenemases and MCR-1 Producing Gram-Negative Bacteria in Aquatic Environments in Batna, Algeria.	Cherak Z, Loucif L, Bendjama E, Moussi A, Benbouza A, Grainat N, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics11101314	2022
	Analysis of microbial sequences in plasma cell-free DNA for early-onset breast cancer patients and healthy females.	Huang YF, Chen YJ, Fan TC, Chang NC, Chen YJ, Midha MK, Chen TH, Yang HH, Wang YT, Yu AL, Chiu KP.	BMC Med Genomics	10.1186/s12920-018-0329-y	2018
	The Effects of Rhizosphere Inoculation with Pseudomonas mandelii on Formation of Apoplast Barriers, HvPIP2 Aquaporins and Hydraulic Conductance of Barley.	Arkhipova T, Sharipova G, Akhiyarova G, Kuzmina L, Galin I, Martynenko E, Seldimirova O, Nuzhnaya T, Feoktistova A, Timergalin M, Kudoyarova G.	Microorganisms	10.3390/microorganisms10050935	2022
	Improving the Activity of Antimicrobial Peptides Against Aquatic Pathogen Bacteria by Amino Acid Substitutions and Changing the Ratio of Hydrophobic Residues.	Tan R, Wang M, Xu H, Qin L, Wang J, Cui P, Ru S.	Front Microbiol	10.3389/fmicb.2021.773076	2021
Metabolism	Effects of an algicidal bacterium Pseudomonas mendocina on the growth and antioxidant system of Aphanizomenon flos-aquae.	Shi S, Tang D, Liu Y.	Curr Microbiol	10.1007/s00284-009-9404-0	2009
	Simultaneous removal of nitrogen and arsenite by heterotrophic nitrification and aerobic denitrification bacterium Hydrogenophaga sp. H7.	Fan X, Nie L, Chen Z, Zheng Y, Wang G, Shi K.	Front Microbiol	10.3389/fmicb.2022.1103913	2022
	Ligational behavior of Schiff bases towards transition metal ion and metalation effect on their antibacterial activity.	Devi J, Batra N, Malhotra R.	Spectrochim Acta A Mol Biomol Spectrosc	10.1016/j.saa.2012.06.026	2012
	Assessment of Microbiological Content of Private and Public Recreational Water Facilities and Their Antimicrobial Susceptibility Pattern in Al-Ahsa.	AlTuraifi FH, AlMomatin AA, Badger-Emeka L, Emeka PM, Islam MM.	Environ Health Insights	10.1177/1178630219887393	2019
	Environmental magnesium ion affects global gene expression, motility, biofilm formation and virulence of Vibrio parahaemolyticus.	Li X, Zhang X, Zhang M, Luo X, Zhang T, Liu X, Lu R, Zhang Y.	Biofilm	10.1016/j.bioflm.2024.100194	2024
	Widespread distribution of hmf genes in Proteobacteria reveals key enzymes for 5-hydroxymethylfurfural conversion.	Donoso RA, Gonzalez-Toro F, Perez-Pantoja D.	Comput Struct Biotechnol J	10.1016/j.csbj.2021.04.017	2021
	Enzymes for the biofunctionalization of poly(ethylene terephthalate).	Zimmermann W, Billig S.	Adv Biochem Eng Biotechnol	10.1007/10_2010_87	2011
Metabolism	Differential effects of Pseudomonas mendocina and Glomus intraradices on lettuce plants physiological response and aquaporin PIP2 gene expression under elevated atmospheric CO2 and drought.	Alguacil Mdel M, Kohler J, Caravaca F, Roldan A.	Microb Ecol	10.1007/s00248-009-9544-6	2009
	Comparative growth potential of thermophilic amylolytic Bacillus sp. on unconventional media food wastes and its industrial application.	Saleh F, Hussain A, Younis T, Ali S, Rashid M, Ali A, Mustafa G, Jabeen F, Al-Surhanee AA, Alnoman MM, Qamer S.	Saudi J Biol Sci	10.1016/j.sjbs.2020.09.045	2020
Enzymology	Assessment of denitrifying bacterial composition in activated sludge.	Srinandan CS, Shah M, Patel B, Nerurkar AS.	Bioresour Technol	10.1016/j.biortech.2011.07.094	2011
	Epidemiology of beta-Lactamase-Producing Staphylococci and Gram Negative Bacteria as Cause of Clinical Bovine Mastitis in Tunisia.	Klibi A, Jouini A, Boubaker El Andolsi R, Kmiha S, Ben Hamda C, Ghedira K, Hamrouni S, Ghram A, Maaroufi A.	Biomed Res Int	10.1155/2019/2165316	2019
	Bacterial Meningitis among Intracranial Surgery Patients at a University Hospital in Northern India.	Kar M, Jamwal A, Dubey A, Sahu C, Patel SS.	Indian J Crit Care Med	10.5005/jp-journals-10071-24363	2022
Enzymology	Diversity of endocervical microbiota associated with genital Chlamydia trachomatis infection and infertility among women visiting obstetrics and gynecology clinics in Malaysia.	Cheong HC, Yap PSX, Chong CW, Cheok YY, Lee CYQ, Tan GMY, Sulaiman S, Hassan J, Sabet NS, Looi CY, Gupta R, Arulanandam B, AbuBakar S, Teh CSJ, Chang LY, Wong WF.	PLoS One	10.1371/journal.pone.0224658	2019
	Degradation of a mixture of 13 polycyclic aromatic hydrocarbons by commercial effective microorganisms.	Ksiazek-Trela P, Figura D, Wezka D, Szpyrka E.	Open Life Sci	10.1515/biol-2022-0831	2024
	Maltooligosaccharides: Properties, Production and Applications.	Blahova M, Stefuca V, Hronska H, Rosenberg M.	Molecules	10.3390/molecules28073281	2023
	Slowly utilized carbon sources enhance botulinic specific toxicity by co-culture of Clostridium argentinense with the non-pathogen Pseudomonas mendocina	Centorbi HJ, Silva HJ.	World J Microbiol Biotechnol	10.1007/s11274-008-9676-8	2008
	C. elegans transgenerational avoidance of P. fluorescens is mediated by the Pfs1 sRNA and vab-1.	Seto RJ, Brown R, Kaletsky R, Parsons LR, Moore RS, Balch JM, Gitai Z, Murphy CT.	Sci Adv	10.1126/sciadv.adt3850	2025
	Use of Bentofeed and Persian Melon Peel Biochar in the Decolorization of Water Contaminated with Methylene Blue and their Effects on In vitro Ruminal Fermentation.	Kazemi M, Mokhtarpour A.	Arch Razi Inst	10.22092/ari.2020.126682.1352	2021
	Salt-tolerant rhizobacteria-mediated induced tolerance in wheat (Triticum aestivum) and chemical diversity in rhizosphere enhance plant growth	Tivari S, Singh P, Tiwari R, Meena KK, Yandigeri M, Singh DP, Arora DK.	Biol Fertil Soils	10.1007/s00374-011-0598-5	2011
Pathogenicity	Protein absorption in the zebrafish gut is regulated by interactions between lysosome rich enterocytes and the microbiome.	Childers L, Park J, Wang S, Liu R, Barry R, Watts SA, Rawls JF, Bagnat M.	Elife	10.7554/elife.100611	2025
Phylogeny	Milk microbiome signatures of subclinical mastitis-affected cattle analysed by shotgun sequencing.	Bhatt VD, Ahir VB, Koringa PG, Jakhesara SJ, Rank DN, Nauriyal DS, Kunjadia AP, Joshi CG.	J Appl Microbiol	10.1111/j.1365-2672.2012.05244.x	2012
Enzymology	Native valve endocarditis due to Pseudomonas mendocina in a patient with mental retardation and a review of literature.	Mert A, Yilmaz M, Ozaras R, Kocak F, Dagsali S.	Scand J Infect Dis	10.1080/00365540601071883	2007
Phylogeny	Impacts of a novel defensive symbiosis on the nematode host microbiome.	Dahan D, Preston GM, Sealey J, King KC.	BMC Microbiol	10.1186/s12866-020-01845-0	2020
	Evaluation of Tunisian wheat endophytes as plant growth promoting bacteria and biological control agents against Fusarium culmorum.	Saadaoui M, Faize M, Rifai A, Tayeb K, Omri Ben Youssef N, Kharrat M, Roeckel-Drevet P, Chaar H, Venisse JS.	PLoS One	10.1371/journal.pone.0300791	2024
	An AM fungus and a PGPR intensify the adverse effects of salinity on the stability of rhizosphere soil aggregates of Lactuca sativa	Kohler J, Caravaca F, Roldan A.	Soil Biol Biochem	10.1016/j.soilbio.2009.11.021	2010
	Alginate production by Pseudomonas mendocina in a stirred draft fermenter	Muller JM, Monte Alegre R.	World J Microbiol Biotechnol	10.1007/s11274-006-9285-3	2007
	Optimization and Chemical Characterization of Biosurfactant Produced from a Novel Pseudomonas guguanensis Strain Iraqi ZG.K.M.	Ghazi Faisal Z, Sallal Mahdi M, Alobaidi KH.	Int J Microbiol	10.1155/2023/1571991	2023
Phylogeny	Detection and identification of bacteria in an isolated system with near-infrared spectroscopy and multivariate analysis.	Alexandrakis D, Downey G, Scannell AG.	J Agric Food Chem	10.1021/jf073407x	2008
Stress	Insights Into The Effects of Amino Acid Substitutions on The Stability of Reteplase Structure: A Molecular Dynamics Simulation Study.	Haji-Allahverdipoor K, Jalali Javaran M, Rashidi Monfared S, Khadem-Erfan MB, Nikkhoo B, Bahrami Rad Z, Eslami H, Nasseri S.	Iran J Biotechnol	10.30498/ijb.2022.308798.3175	2023
Metabolism	Use of Pseudomonas mendocina, or recombinant Escherichia coli cells expressing toluene-4-monooxygenase, and a cell-free tyrosinase for the synthesis of 4-fluorocatechol from fluorobenzene.	Nolan LC, O'Connor KE.	Biotechnol Lett	10.1007/s10529-007-9365-y	2007
	In Vitro Activity of Ceftolozane/Tazobactam vs Nonfermenting, Gram-Negative Cystic Fibrosis Isolates.	Forrester JB, Steed LL, Santevecchi BA, Flume P, Palmer-Long GE, Bosso JA.	Open Forum Infect Dis	10.1093/ofid/ofy158	2018
	Use of Pseudomonas mendocina, or recombinant Escherichia coli cells expressing toluene-4-monooxygenase, and a cell-free tyrosinase for the synthesis of 4-fluorocatechol from fluorobenzene	Nolan LC, O'Connor KE.	Biotechnol Lett		2007
Metabolism	Treatment of waste gas containing monomethylamine in a biofilter enriched with Pseudomonas mendocina.	Pandey RA, Gangane R, Mudliar SN, Rajvaidya AS.	Waste Manag	10.1016/j.wasman.2005.01.024	2006
	Effect of drought on the stability of rhizosphere soil aggregates of Lactuca sativa grown in a degraded soil inoculated with PGPR and AM fungi	Kohler J, Caravaca F, Roldan A.	Appl Soil Ecol	10.1016/j.apsoil.2009.03.007	2009
	One-step formation of three-dimensional macroporous bacterial sponges as a novel approach for the preparation of bioreactors for bioremediation and green treatment of water.	Al-Jwaid AK, Berillo D, Savina IN, Cundy AB, Caplin JL.	RSC Adv	10.1039/c8ra04219e	2018
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Metabolism	Effect of high temperature on bacterial community dynamics in anaerobic acidogenesis using mesophilic sludge inoculum.	Kim W, Hwang K, Shin SG, Lee S, Hwang S.	Bioresour Technol	10.1016/j.biortech.2009.03.029	2010
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Metabolism	Identification of a denitrifying bacterium and verification of its anaerobic ammonium oxidation ability.	Hu B, Zheng P, Li J, Xu X, Jin R.	Sci China C Life Sci	10.1007/s11427-006-2018-x	2006
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Enzymology	Structural Insights into Carboxylic Polyester-Degrading Enzymes and Their Functional Depolymerizing Neighbors.	Leitao AL, Enguita FJ.	Int J Mol Sci	10.3390/ijms22052332	2021
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Pathogenicity	Antimicrobial resistance in hospitalized surgical patients: a silently emerging public health concern in Benin.	Yehouenou CL, Kpangon AA, Affolabi D, Rodriguez-Villalobos H, Van Bambeke F, Dalleur O, Simon A.	Ann Clin Microbiol Antimicrob	10.1186/s12941-020-00398-4	2020
	ACC deaminase producing rhizobacterium Enterobacter cloacae ZNP-4 enhance abiotic stress tolerance in wheat plant.	Singh RP, Pandey DM, Jha PN, Ma Y.	PLoS One	10.1371/journal.pone.0267127	2022
Pathogenicity	Emergence of Carbapenem-Resistant Pseudomonas asiatica Producing NDM-1 and VIM-2 Metallo-beta-Lactamases in Myanmar.	Tohya M, Tada T, Watanabe S, Kuwahara-Arai K, Zin KN, Zaw NN, Aung MY, Mya S, Zan KN, Kirikae T, Tin HH.	Antimicrob Agents Chemother	10.1128/aac.00475-19	2019
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	A multicentre study reveals dysbiosis in the microbial co-infection and antimicrobial resistance gene profile in the nasopharynx of COVID-19 patients.	Mahmud ASM, Seers CA, Shaikh AA, Taznin T, Uzzaman MS, Osman E, Habib MA, Akter S, Banu TA, Sarkar MMH, Goswami B, Jahan I, Okeoma CM, Khan MS, Reynolds EC.	Sci Rep	10.1038/s41598-023-30504-3	2023
Metabolism	The impact of ionic strength on the adsorption of protons, Pb, Cd, and Sr onto the surfaces of Gram negative bacteria: testing non-electrostatic, diffuse, and triple-layer models.	Borrok DM, Fein JB.	J Colloid Interface Sci	10.1016/j.jcis.2005.01.015	2005
Metabolism	Characterization of chromate-resistant and -reducing bacteria by traditional means and by a high-throughput phenomic technique for bioremediation purposes.	Viti C, Decorosi F, Tatti E, Giovannetti L.	Biotechnol Prog	10.1021/bp0603098	2007
Metabolism	Growth by Insertion: The Family of Bacterial DDxP Proteins.	Di Nocera P, De Gregorio E.	Int J Mol Sci	10.3390/ijms21239184	2020
Pathogenicity	The In Vitro Proinflammatory Properties of Water Accommodated Sediment Extracts from a Creosote-Contaminated US Environmental Protection Agency Superfund Site.	Silva RA, Di Giulio RT, Rice CD.	Environ Toxicol Chem	10.1002/etc.5001	2021
	Identification, Characterization, and Virulence Gene Expression of Marine Enterobacteria in the Upper Gulf of Thailand.	Nimnoi P, Pongsilp N.	Microorganisms	10.3390/microorganisms10030511	2022
Enzymology	Diversity of culturable aerobic denitrifying bacteria in the sediment, water and biofilms in Liangshui River of Beijing, China.	Lv P, Luo J, Zhuang X, Zhang D, Huang Z, Bai Z.	Sci Rep	10.1038/s41598-017-09556-9	2017
	Disaggregation as an interaction mechanism among intestinal bacteria.	Sundarraman D, Smith TJ, Kast JVZ, Guillemin K, Parthasarathy R.	Biophys J	10.1016/j.bpj.2022.08.010	2022
	Plasmid-associated biodegradation of an organophosphorus pesticide, Monocrotophos, by Pseudomonas mendocina	Bhadbhade BJ, Dhakephalkar PK, Sarnaik SS, Kanekar PP.	Biotechnol Lett	10.1023/a:1015099409563	2002
	Bactericidal effectors of the Stenotrophomonas maltophilia type IV secretion system: functional definition of the nuclease TfdA and structural determination of TfcB.	Cobe BL, Dey S, Minasov G, Inniss N, Satchell KJF, Cianciotto NP.	mBio	10.1128/mbio.01198-24	2024
Metabolism	Influence of carbon source on pyrimidine synthesis in Pseudomonas mendocina.	Santiago MF, West TP.	J Basic Microbiol	10.1002/jobm.200310297	2003
	Phytobacter diazotrophicus from Intestine of Caenorhabditis elegans Confers Colonization-Resistance against Bacillus nematocida Using Flagellin (FliC) as an Inhibition Factor.	Niu Q, Liu S, Yin M, Lei S, Rezzonico F, Zhang L.	Pathogens	10.3390/pathogens11010082	2022
Enzymology	Purification and characterization of an alkaline lipase from a newly isolated Pseudomonas mendocina PK-12CS and chemoselective hydrolysis of fatty acid ester.	Jinwal UK, Roy U, Chowdhury AR, Bhaduri AP, Roy PK.	Bioorg Med Chem	10.1016/s0968-0896(02)00516-3	2003
	The mechanistic effects of human digestion on magnesium oxide nanoparticles: implications for probiotics Lacticaseibacillus rhamnosus GG and Bifidobacterium bifidum VPI 1124.	Garcia-Rodriguez A, Stillwell A, Tochilovsky B, Tanzman JV, Limage R, Kolba N, Tako E, Marques CNH, Mahler GJ.	Environ Sci Nano	10.1039/d2en00150k	2022
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Metabolism	Association with soil bacteria enhances p38-dependent infection resistance in Caenorhabditis elegans.	Montalvo-Katz S, Huang H, Appel MD, Berg M, Shapira M.	Infect Immun	10.1128/iai.00653-12	2013
Enzymology	Regulation of pyrimidine synthesis in Pseudomonas mendocina.	Santiago MF, West TP.	J Basic Microbiol	10.1002/1521-4028(200203)42:1<75::aid-jobm75>3.0.co;2-w	2002
Metabolism	Evaluation of natural and enhanced PCP biodegradation at a former pesticide manufacturing plant.	Kao CM, Chai CT, Liu JK, Yeh TY, Chen KF, Chen SC.	Water Res	10.1016/j.watres.2003.10.030	2004
Metabolism	Evaluation of pyrrolidonyl arylamidase for the identification of nonfermenting Gram-negative rods.	Bombicino KA, Almuzara MN, Famiglietti AM, Vay C.	Diagn Microbiol Infect Dis	10.1016/j.diagmicrobio.2006.02.012	2007
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Enzymology	Streamlined production, purification, and characterization of recombinant extracellular polyhydroxybutyrate depolymerases.	Martinez-Tobon DI, Waters B, Elias AL, Sauvageau D.	Microbiologyopen	10.1002/mbo3.1001	2020
Genetics	[Constructing of system of genetic analysis in Pseudomonas mendocina].	Vasilenko SL, Titok MA, Maksimova NP.	Genetika		2000
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Metabolism	Biochemical observations on medium-chain-length polyhydroxyalkanoate biosynthesis and accumulation in Pseudomonas mendocina.	Kroumova AB, Wagner GJ, Davies HM.	Arch Biochem Biophys	10.1016/s0003-9861(02)00350-8	2002
Enzymology	Cloning, characterization and comparison of the Pseudomonas mendocina polyhydroxyalkanoate synthases Phac1 and PhaC2.	Hein S, Paletta JR, Steinbuchel A.	Appl Microbiol Biotechnol	10.1007/s00253-001-0863-x	2002
Phylogeny	Morphological and physiological response of sour orange (Citrus aurantium L.) seedlings to the inoculation of taxonomically characterized bacterial endophytes.	Mushtaq S, Shafiq M, Haider MS, Nayik GA, Salmen SH, El Enshasy HA, Kenawy AA, Goksen G, Vazquez-Nunez E, Ansari MJ.	Saudi J Biol Sci	10.1016/j.sjbs.2022.01.051	2022
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	Strong correlation of total phenotypic resistance of samples from household environments and the prevalence of class 1 integrons suggests for the use of the relative prevalence of intI1 as a screening tool for multi-resistance.	Lucassen R, Rehberg L, Heyden M, Bockmuhl D.	PLoS One	10.1371/journal.pone.0218277	2019
Metabolism	Enhancement of growth and toxin production of Clostridium argentinense by co-culture with Pseudomonas mendocina.	Centorbi HJ, Silva HJ.	Microbios		2000
	Development of an inexpensive matrix-assisted laser desorption-time of flight mass spectrometry method for the identification of endophytes and rhizobacteria cultured from the microbiome associated with maize.	LaMontagne MG, Tran PL, Benavidez A, Morano LD.	PeerJ	10.7717/peerj.11359	2021
	Controlled Delivery of Pan-PAD-Inhibitor Cl-Amidine Using Poly(3-Hydroxybutyrate) Microspheres.	Ahmed D, Puthussery H, Basnett P, Knowles JC, Lange S, Roy I.	Int J Mol Sci	10.3390/ijms222312852	2021
	Effect of C:N molar ratio on monomer composition of polyhydroxyalkanoates produced by Pseudomonas mendocina 0806 and Pseudomonas pseudoalkaligenus YS1.	Hong K, Chen GQ, Yu PH, Zhang G, Liu Y, Chua H.	Appl Biochem Biotechnol	10.1385/abab:84-86:1-9:971	2000
	Multifaceted Interplay between Hfq and the Small RNA GssA in Pseudomonas aeruginosa.	Santoro S, Paganin C, Gilardi S, Brignoli T, Bertoni G, Ferrara S.	mBio	10.1128/mbio.02418-22	2023
Metabolism	Production of polyesters consisting of medium chain length 3-hydroxyalkanoic acids by Pseudomonas mendocina 0806 from various carbon sources.	Tian W, Hong K, Chen GQ, Wu Q, Zhang RQ, Huang W.	Antonie Van Leeuwenhoek	10.1023/a:1002099023046	2000
	In Silico Study of the RSH (RelA/SpoT Homologs) Gene Family and Expression Analysis in Response to PGPR Bacteria and Salinity in Brassica napus.	Dabrowska GB, Turkan S, Tylman-Mojzeszek W, Mierek-Adamska A.	Int J Mol Sci	10.3390/ijms221910666	2021
Metabolism	Bioremediation of an industrial effluent containing monocrotophos.	Bhadbhade BJ, Sarnaik SS, Kanekar PP.	Curr Microbiol	10.1007/s00284-002-3681-1	2002
Enzymology	Genome-wide identification of 5-methylcytosine sites in bacterial genomes by high-throughput sequencing of MspJI restriction fragments.	Anton BP, Fomenkov A, Wu V, Roberts RJ.	PLoS One	10.1371/journal.pone.0247541	2021
	Infectious Complications in Pediatric, Adolescent and Young Adult Patients Undergoing CD19-CAR T Cell Therapy.	Maron GM, Hijano DR, Epperly R, Su Y, Tang L, Hayden RT, Naik S, Karol SE, Gottschalk S, Triplett BM, Talleur AC.	Front Oncol	10.3389/fonc.2022.845540	2022
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	Surveillance of Extended-Spectrum beta-Lactamase-, Cephalosporinase- and Carbapenemase-Producing Gram-Negative Bacteria in Raw Milk Filters and Healthy Dairy Cattle in Three Farms in Île-de-France, France.	Plassard V, Gisbert P, Granier SA, Millemann Y.	Front Vet Sci	10.3389/fvets.2021.633598	2021
	Tumor microbiome contributes to an aggressive phenotype in the basal-like subtype of pancreatic cancer.	Guo W, Zhang Y, Guo S, Mei Z, Liao H, Dong H, Wu K, Ye H, Zhang Y, Zhu Y, Lang J, Hu L, Jin G, Kong X.	Commun Biol	10.1038/s42003-021-02557-5	2021
Metabolism	Identification and characterisation of short chain rhamnolipid production in a previously uninvestigated, non-pathogenic marine pseudomonad.	Twigg MS, Tripathi L, Zompra A, Salek K, Irorere VU, Gutierrez T, Spyroulias GA, Marchant R, Banat IM.	Appl Microbiol Biotechnol	10.1007/s00253-018-9202-3	2018
	No evidence for a common blood microbiome based on a population study of 9,770 healthy humans.	Tan CCS, Ko KKK, Chen H, Liu J, Loh M, SG10K_Health Consortium, Chia M, Nagarajan N.	Nat Microbiol	10.1038/s41564-023-01350-w	2023
	Nitrite reductase genes in halobenzoate degrading denitrifying bacteria.	Song B, Ward BB.	FEMS Microbiol Ecol	10.1111/j.1574-6941.2003.tb01075.x	2003
Genetics	Multi-faceted metagenomic analysis of spacecraft associated surfaces reveal planetary protection relevant microbial composition.	Highlander SK, Wood JM, Gillece JD, Folkerts M, Fofanov V, Furstenau T, Singh NK, Guan L, Seuylemezian A, Benardini JN, Engelthaler DM, Venkateswaran K, Keim PS.	PLoS One	10.1371/journal.pone.0282428	2023
Metabolism	Removal of Nitrate in Simulated Water at Low Temperature by a Novel Psychrotrophic and Aerobic Bacterium, Pseudomonas taiwanensis Strain J.	He T, Ye Q, Sun Q, Cai X, Ni J, Li Z, Xie D.	Biomed Res Int	10.1155/2018/4984087	2018
Metabolism	Roles of siderophores, oxalate, and ascorbate in mobilization of iron from hematite by the aerobic bacterium Pseudomonas mendocina.	Dehner CA, Awaya JD, Maurice PA, DuBois JL.	Appl Environ Microbiol	10.1128/aem.02349-09	2010
	Genetic Analysis Reveals a Requirement for the Hybrid Sensor Kinase RscS in para-Aminobenzoic Acid/Calcium-Induced Biofilm Formation by Vibrio fischeri.	Dial CN, Fung BL, Visick KL.	J Bacteriol	10.1128/jb.00075-23	2023
	Dissociation of immune responses from pathogen colonization supports pattern recognition in C. elegans.	Twumasi-Boateng K, Shapira M.	PLoS One	10.1371/journal.pone.0035400	2012
	Fate of Antibiotic Resistant Pseudomonas putida and Broad Host Range Plasmid in Natural Soil Microcosms.	Fan XT, Li H, Chen QL, Zhang YS, Ye J, Zhu YG, Su JQ.	Front Microbiol	10.3389/fmicb.2019.00194	2019
	Assessment of Soil Features on the Growth of Environmental Nontuberculous Mycobacterial Isolates from Hawai'i.	Glickman CM, Virdi R, Hasan NA, Epperson LE, Brown L, Dawrs SN, Crooks JL, Chan ED, Strong M, Nelson ST, Honda JR.	Appl Environ Microbiol	10.1128/aem.00121-20	2020
	Utility of platforms Viteks MS and Microflex LT for the identification of complex clinical isolates that require molecular methods for their taxonomic classification.	Rocca MF, Barrios R, Zintgraff J, Martinez C, Irazu L, Vay C, Prieto M.	PLoS One	10.1371/journal.pone.0218077	2019
Enzymology	Abattoirs as non-hospital source of extended spectrum beta lactamase producers: confirmed by the double disc synergy test and characterized by matrix-assisted laser desorption/ionization time of flight mass spectrometry.	Ikegbunam MN, Anagu LO, Iroha IR, Ejikeugwu CE, Esimone CO.	PLoS One	10.1371/journal.pone.0094461	2014
	Identification of a Novel Plasmid Lineage Associated With the Dissemination of Metallo-beta-Lactamase Genes Among Pseudomonads.	Di Pilato V, Antonelli A, Giani T, Henrici De Angelis L, Rossolini GM, Pollini S.	Front Microbiol	10.3389/fmicb.2019.01504	2019
Metabolism	Identification of novel sulfur-containing bacterial polyesters: biosynthesis of poly(3-hydroxy-S-propyl-omega-thioalkanoates) containing thioether linkages in the side chains.	Ewering C, Lutke-Eversloh T, Luftmann H, Steinbuchel A.	Microbiology (Reading)	10.1099/00221287-148-5-1397	2002
Metabolism	Biodegradation of dimethylphenols by bacteria with different ring-cleavage pathways of phenolic compounds.	Viggor S, Heinaru E, Loponen J, Merimaa M, Tenno T, Heinaru A.	Environ Sci Pollut Res Int	10.1007/bf02987421	2002
	The role of plant growth promoting rhizobacteria in plant drought stress responses.	Chieb M, Gachomo EW.	BMC Plant Biol	10.1186/s12870-023-04403-8	2023
	Study on the potential of cold-active lipases from psychrotrophic fungi for detergent formulation.	Sahay S, Chouhan D.	J Genet Eng Biotechnol	10.1016/j.jgeb.2018.04.006	2018
Phylogeny	Evaluation of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry systems for identification of nonfermenting gram-negative bacilli isolated from cultures from cystic fibrosis patients.	Marko DC, Saffert RT, Cunningham SA, Hyman J, Walsh J, Arbefeville S, Howard W, Pruessner J, Safwat N, Cockerill FR, Bossler AD, Patel R, Richter SS.	J Clin Microbiol	10.1128/jcm.00330-12	2012
	Characterization of a lipase from a newly isolated Pseudomonas sp.	Noormohamadi R, Tabandeh F, Shariati P, Otadi M.	Iran J Microbiol		2013
Metabolism	Aromatic hydrocarbon degradation patterns and catechol 2,3-dioxygenase genes in microbial cultures from deep anoxic hypersaline lakes in the eastern Mediterranean sea.	Brusa T, Borin S, Ferrari F, Sorlini C, Corselli C, Daffonchio D.	Microbiol Res	10.1078/0944-5013-00075	2001
	N-isotope effects on the Raman spectra of Fe(2)S(2) ferredoxin and Rieske ferredoxin: evidence for structural rigidity of metal sites.	Rotsaert FJ, Pikus JD, Fox BG, Markley JL, Sanders-Loehr J.	J Biol Inorg Chem	10.1007/s00775-002-0417-4	2003
	Rhizobacteria producing ACC deaminase mitigate water-stress response in finger millet (Eleusine coracana (L.) Gaertn.).	Chandra D, Srivastava R, Glick BR, Sharma AK.	3 Biotech	10.1007/s13205-019-2046-4	2020
	TGFbeta/BMP immune signaling affects abundance and function of C. elegans gut commensals.	Berg M, Monnin D, Cho J, Nelson L, Crits-Christoph A, Shapira M.	Nat Commun	10.1038/s41467-019-08379-8	2019
	Bioaugmentation failed to enhance oil bioremediation in three soil samples from three different continents.	Radwan SS, Al-Mailem DM, Kansour MK.	Sci Rep	10.1038/s41598-019-56099-2	2019
	Efficient polyhydroxybutyrate production from Bacillus juice substrate thuringiensis using sugarcane.	Thammasittirong A, Saechow S, Thammasittirong SN.	Turk J Biol	10.3906/biy-1704-13	2017
Metabolism	The Antibiotic Fosfomycin Mimics the Effects of the Intermediate Metabolites Phosphoenolpyruvate and Glyceraldehyde-3-Phosphate on the Stenotrophomonas maltophilia Transcriptome.	Gil-Gil T, Ochoa-Sanchez LE, Martinez JL.	Int J Mol Sci	10.3390/ijms23010159	2021
	The potential for intraspecific horizontal gene exchange by natural genetic transformation: sexual isolation among genomovars of Pseudomonas stutzeri.	Lorenz MG, Sikorski J.	Microbiology (Reading)	10.1099/00221287-146-12-3081	2000
	Determining chemotactic responses by two subsurface microaerophiles using a simplified capillary assay method.	Mazumder R, Phelps TJ, Krieg NR, Benoit RE.	J Microbiol Methods	10.1016/s0167-7012(99)00072-x	1999
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Metabolism	Cyanate Assimilation by the Alkaliphilic Cyanide-Degrading Bacterium Pseudomonas pseudoalcaligenes CECT5344: Mutational Analysis of the cyn Gene Cluster.	Saez LP, Cabello P, Ibanez MI, Luque-Almagro VM, Roldan MD, Moreno-Vivian C.	Int J Mol Sci	10.3390/ijms20123008	2019
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Metabolism	Effect of various sources of organic carbon and high nitrite and nitrate concentrations on the selection of denitrifying bacteria. II. Continuous cultures in packed bed reactors.	Blaszczyk M.	Acta Microbiol Pol		1983
Genetics	Connecting lignin-degradation pathway with pre-treatment inhibitor sensitivity of Cupriavidus necator.	Wang W, Yang S, Hunsinger GB, Pienkos PT, Johnson DK.	Front Microbiol	10.3389/fmicb.2014.00247	2014
Pathogenicity	Design and activity of a 'dual-targeted' antimicrobial peptide.	He J, Anderson MH, Shi W, Eckert R.	Int J Antimicrob Agents	10.1016/j.ijantimicag.2008.11.013	2009
Metabolism	Structural and Biochemical Analysis of Tyrosine Phosphatase Related to Biofilm Formation A (TpbA) from the Opportunistic Pathogen Pseudomonas aeruginosa PAO1.	Xu K, Li S, Yang W, Li K, Bai Y, Xu Y, Jin J, Wang Y, Bartlam M.	PLoS One	10.1371/journal.pone.0124330	2015
Enzymology	Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases.	Hajighasemi M, Nocek BP, Tchigvintsev A, Brown G, Flick R, Xu X, Cui H, Hai T, Joachimiak A, Golyshin PN, Savchenko A, Edwards EA, Yakunin AF.	Biomacromolecules	10.1021/acs.biomac.6b00223	2016
	Two-dimensional pulsed electron spin resonance characterization of 15N-labeled archaeal Rieske-type ferredoxin.	Iwasaki T, Samoilova RI, Kounosu A, Dikanov SA.	FEBS Lett	10.1016/j.febslet.2009.09.050	2009
Metabolism	Genetic engineering of a highly solvent-tolerant Pseudomonas putida strain for biotransformation of toluene to p-hydroxybenzoate.	Ramos-Gonzalez MI, Ben-Bassat A, Campos MJ, Ramos JL.	Appl Environ Microbiol	10.1128/aem.69.9.5120-5127.2003	2003
Enzymology	Subtilase SprP exerts pleiotropic effects in Pseudomonas aeruginosa.	Pelzer A, Polen T, Funken H, Rosenau F, Wilhelm S, Bott M, Jaeger KE.	Microbiologyopen	10.1002/mbo3.150	2014
Phylogeny	Bacterial diversity analysis of larvae and adult midgut microflora using culture-dependent and culture-independent methods in lab-reared and field-collected Anopheles stephensi-an Asian malarial vector.	Rani A, Sharma A, Rajagopal R, Adak T, Bhatnagar RK.	BMC Microbiol	10.1186/1471-2180-9-96	2009
	Alleviation of drought stress in pulse crops with ACC deaminase producing rhizobacteria isolated from acidic soil of Northeast India.	Saikia J, Sarma RK, Dhandia R, Yadav A, Bharali R, Gupta VK, Saikia R.	Sci Rep	10.1038/s41598-018-21921-w	2018
	Seasonally variable intestinal metagenomes of the red palm weevil (Rhynchophorus ferrugineus).	Jia S, Zhang X, Zhang G, Yin A, Zhang S, Li F, Wang L, Zhao D, Yun Q, Tala, Wang J, Sun G, Baabdullah M, Yu X, Hu S, Al-Mssallem IS, Yu J.	Environ Microbiol	10.1111/1462-2920.12262	2013
	The Interaction between Arbuscular Mycorrhizal Fungi and Endophytic Bacteria Enhances Plant Growth of Acacia gerrardii under Salt Stress.	Hashem A, Abd Allah EF, Alqarawi AA, Al-Huqail AA, Wirth S, Egamberdieva D.	Front Microbiol	10.3389/fmicb.2016.01089	2016
Metabolism	Metabolic and energetic control of Pseudomonas mendocina growth during transitions from aerobic to oxygen-limited conditions in chemostat cultures.	Verdoni N, Aon MA, Lebeault JM.	Appl Environ Microbiol	10.1128/aem.58.9.3150-3156.1992	1992
Enzymology	Free radical chemistry of advanced oxidation process removal of nitrosamines in water.	Landsman NA, Swancutt KL, Bradford CN, Cox CR, Kiddle JJ, Mezyk SP.	Environ Sci Technol	10.1021/es070275f	2007
Pathogenicity	NaOH-debittering induces changes in bacterial ecology during table olives fermentation.	Cocolin L, Alessandria V, Botta C, Gorra R, De Filippis F, Ercolini D, Rantsiou K.	PLoS One	10.1371/journal.pone.0069074	2013
	Elevated Air Humidity Changes Soil Bacterial Community Structure in the Silver Birch Stand.	Truu M, Ostonen I, Preem JK, Lohmus K, Nolvak H, Ligi T, Rosenvald K, Parts K, Kupper P, Truu J.	Front Microbiol	10.3389/fmicb.2017.00557	2017
Metabolism	Pseudomonas putida CSV86: a candidate genome for genetic bioaugmentation.	Paliwal V, Raju SC, Modak A, Phale PS, Purohit HJ.	PLoS One	10.1371/journal.pone.0084000	2014
	Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons.	Cambray G, Sanchez-Alberola N, Campoy S, Guerin E, Da Re S, Gonzalez-Zorn B, Ploy MC, Barbe J, Mazel D, Erill I.	Mob DNA	10.1186/1759-8753-2-6	2011
	Pulmonary exacerbations in cystic fibrosis with negative bacterial cultures.	Zemanick ET, Wagner BD, Harris JK, Wagener JS, Accurso FJ, Sagel SD.	Pediatr Pulmonol	10.1002/ppul.21221	2010
	Microbial Production of Biodegradable Lactate-Based Polymers and Oligomeric Building Blocks From Renewable and Waste Resources.	Nduko JM, Taguchi S.	Front Bioeng Biotechnol	10.3389/fbioe.2020.618077	2020
Enzymology	Multiple signals modulate the activity of the complex sensor kinase TodS.	Silva-Jimenez H, Ortega A, Garcia-Fontana C, Ramos JL, Krell T.	Microb Biotechnol	10.1111/1751-7915.12142	2015
Enzymology	Thermodynamic and structural investigation of the specific SDS binding of Humicola insolens cutinase.	Kold D, Dauter Z, Laustsen AK, Brzozowski AM, Turkenburg JP, Nielsen AD, Koldso H, Petersen E, Schiott B, De Maria L, Wilson KS, Svendsen A, Wimmer R.	Protein Sci	10.1002/pro.2489	2014
Pathogenicity	N-acetyl-L-cysteine affects growth, extracellular polysaccharide production, and bacterial biofilm formation on solid surfaces.	Olofsson AC, Hermansson M, Elwing H.	Appl Environ Microbiol	10.1128/aem.69.8.4814-4822.2003	2003
	Proton motive force, energy recycling by end product excretion, and metabolic uncoupling during anaerobic growth of Pseudomonas mendocina.	Verdoni N, Aon MA, Lebeault JM, Thomas D.	J Bacteriol	10.1128/jb.172.12.6673-6681.1990	1990
	Advances in Research on the Bioactivity of Alginate Oligosaccharides.	Xing M, Cao Q, Wang Y, Xiao H, Zhao J, Zhang Q, Ji A, Song S.	Mar Drugs	10.3390/md18030144	2020
Metabolism	Characterization of a novel subgroup of extracellular medium-chain-length polyhydroxyalkanoate depolymerases from actinobacteria.	Gangoiti J, Santos M, Prieto MA, de la Mata I, Serra JL, Llama MJ.	Appl Environ Microbiol	10.1128/aem.01707-12	2012
Metabolism	Overexpression and characterization of medium-chain-length polyhydroxyalkanoate granule bound polymerases from Pseudomonas putida GPo1.	Ren Q, de Roo G, Witholt B, Zinn M, Thony-Meyer L.	Microb Cell Fact	10.1186/1475-2859-8-60	2009
Enzymology	Solution conformation of the His-47 to Ala-47 mutant of Pseudomonas stutzeri ZoBell ferrocytochrome c-551.	Liang Q, Miller GT, Beeghley CA, Graf CB, Timkovich R.	Biophys J	10.1529/biophysj.106.102772	2007
Metabolism	Osmotically induced synthesis of the dipeptide N-acetylglutaminylglutamine amide is mediated by a new pathway conserved among bacteria.	Sagot B, Gaysinski M, Mehiri M, Guigonis JM, Le Rudulier D, Alloing G.	Proc Natl Acad Sci U S A	10.1073/pnas.1003063107	2010
	Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing.	Lenchi N, Inceoglu O, Kebbouche-Gana S, Gana ML, Lliros M, Servais P, Garcia-Armisen T.	PLoS One	10.1371/journal.pone.0066588	2013
	The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model.	Dirksen P, Marsh SA, Braker I, Heitland N, Wagner S, Nakad R, Mader S, Petersen C, Kowallik V, Rosenstiel P, Felix MA, Schulenburg H.	BMC Biol	10.1186/s12915-016-0258-1	2016
Enzymology	Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates.	Braun-Howland EB, Vescio PA, Nierzwicki-Bauer SA.	Appl Environ Microbiol	10.1128/aem.59.10.3219-3224.1993	1993
Metabolism	Biotransformation of nitrobenzene by bacteria containing toluene degradative pathways.	Haigler BE, Spain JC.	Appl Environ Microbiol	10.1128/aem.57.11.3156-3162.1991	1991
Metabolism	Effectors of the Stenotrophomonas maltophilia Type IV Secretion System Mediate Killing of Clinical Isolates of Pseudomonas aeruginosa.	Nas MY, Gabell J, Cianciotto NP.	mBio	10.1128/mbio.01502-21	2021
Phylogeny	Simultaneous quantification of multiple bacteria by the BactoChip microarray designed to target species-specific marker genes.	Ballarini A, Segata N, Huttenhower C, Jousson O.	PLoS One	10.1371/journal.pone.0055764	2013
Metabolism	Thymidine salvage in Pseudomonas stutzeri and Pseudomonas aeruginosa provided by heterologous expression of Escherichia coli thymidine kinase gene.	Carlson CA, Stewart GJ, Ingraham JL.	J Bacteriol	10.1128/jb.163.1.291-295.1985	1985
Metabolism	Involvement of a novel enzyme, MdpA, in methyl tert-butyl ether degradation in Methylibium petroleiphilum PM1.	Schmidt R, Battaglia V, Scow K, Kane S, Hristova KR.	Appl Environ Microbiol	10.1128/aem.01192-08	2008
	Proteomic study of the brackish water mussel Mytilopsis leucophaeata.	Stekhoven FMS, van der Velde G, Lee TH, Bottrill AR.	Zool Stud	10.1186/s40555-014-0081-8	2015
Metabolism	Regulation and characterization of the dadRAX locus for D-amino acid catabolism in Pseudomonas aeruginosa PAO1.	He W, Li C, Lu CD.	J Bacteriol	10.1128/jb.00036-11	2011
Metabolism	Chemotaxis to pyrimidines and identification of a cytosine chemoreceptor in Pseudomonas putida.	Liu X, Wood PL, Parales JV, Parales RE.	J Bacteriol	10.1128/jb.01708-08	2009
Pathogenicity	Antimicrobial effectors in the nematode Caenorhabditis elegans: an outgroup to the Arthropoda.	Dierking K, Yang W, Schulenburg H.	Philos Trans R Soc Lond B Biol Sci	10.1098/rstb.2015.0299	2016
Enzymology	A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization.	Choo DW, Kurihara T, Suzuki T, Soda K, Esaki N.	Appl Environ Microbiol	10.1128/aem.64.2.486-491.1998	1998
	Quaternary ammonium oxidative demethylation: X-ray crystallographic, resonance Raman, and UV-visible spectroscopic analysis of a Rieske-type demethylase.	Daughtry KD, Xiao Y, Stoner-Ma D, Cho E, Orville AM, Liu P, Allen KN.	J Am Chem Soc	10.1021/ja2111898	2012
Genetics	Evolutionary dynamics of clustered irregularly interspaced short palindromic repeat systems in the ocean metagenome.	Sorokin VA, Gelfand MS, Artamonova II.	Appl Environ Microbiol	10.1128/aem.01985-09	2010
Metabolism	Characterization of the Pseudomonas pseudoalcaligenes CECT5344 Cyanase, an enzyme that is not essential for cyanide assimilation.	Luque-Almagro VM, Huertas MJ, Saez LP, Luque-Romero MM, Moreno-Vivian C, Castillo F, Roldan MD, Blasco R.	Appl Environ Microbiol	10.1128/aem.00916-08	2008
	Abrolhos bank reef health evaluated by means of water quality, microbial diversity, benthic cover, and fish biomass data.	Bruce T, Meirelles PM, Garcia G, Paranhos R, Rezende CE, de Moura RL, Filho RF, Coni EO, Vasconcelos AT, Amado Filho G, Hatay M, Schmieder R, Edwards R, Dinsdale E, Thompson FL.	PLoS One	10.1371/journal.pone.0036687	2012
Metabolism	Properties of a Pseudomonas stutzeri outer membrane channel-forming protein (NosA) required for production of copper-containing N2O reductase.	Lee HS, Hancock RE, Ingraham JL.	J Bacteriol	10.1128/jb.171.4.2096-2100.1989	1989
Metabolism	Elucidating the Pseudomonas aeruginosa fatty acid degradation pathway: identification of additional fatty acyl-CoA synthetase homologues.	Zarzycki-Siek J, Norris MH, Kang Y, Sun Z, Bluhm AP, McMillan IA, Hoang TT.	PLoS One	10.1371/journal.pone.0064554	2013
Metabolism	Arginine racemization by coupled catabolic and anabolic dehydrogenases.	Li C, Lu CD.	Proc Natl Acad Sci U S A	10.1073/pnas.0808269106	2009
Metabolism	Phenazines and other redox-active antibiotics promote microbial mineral reduction.	Hernandez ME, Kappler A, Newman DK.	Appl Environ Microbiol	10.1128/aem.70.2.921-928.2004	2004
Metabolism	Bacterial community dynamics during start-up of a trickle-bed bioreactor degrading aromatic compounds.	Stoffels M, Amann R, Ludwig W, Hekmat D, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.64.3.930-939.1998	1998
	Current development of biodegradable polymeric materials for biomedical applications.	Song R, Murphy M, Li C, Ting K, Soo C, Zheng Z.	Drug Des Devel Ther	10.2147/dddt.s165440	2018
Metabolism	Aerobic denitrifying bacteria that produce low levels of nitrous oxide.	Takaya N, Catalan-Sakairi MA, Sakaguchi Y, Kato I, Zhou Z, Shoun H.	Appl Environ Microbiol	10.1128/aem.69.6.3152-3157.2003	2003
Metabolism	Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species.	Beloqui A, Nechitaylo TY, Lopez-Cortes N, Ghazi A, Guazzaroni ME, Polaina J, Strittmatter AW, Reva O, Waliczek A, Yakimov MM, Golyshina OV, Ferrer M, Golyshin PN.	Appl Environ Microbiol	10.1128/aem.00902-10	2010
Enzymology	Evaluation of the VITEK 2 system for rapid identification of medically relevant gram-negative rods.	Funke G, Monnet D, deBernardis C, von Graevenitz A, Freney J.	J Clin Microbiol	10.1128/jcm.36.7.1948-1952.1998	1998
	Nickel-resistant bacteria from anthropogenically nickel-polluted and naturally nickel-percolated ecosystems.	Stoppel R, Schlegel HG.	Appl Environ Microbiol	10.1128/aem.61.6.2276-2285.1995	1995
	Microbial ecology of anaerobic digesters: the key players of anaerobiosis.	Ali Shah F, Mahmood Q, Maroof Shah M, Pervez A, Ahmad Asad S.	ScientificWorldJournal	10.1155/2014/183752	2014
Enzymology	Fatty acid biosynthesis in Pseudomonas aeruginosa is initiated by the FabY class of beta-ketoacyl acyl carrier protein synthases.	Yuan Y, Sachdeva M, Leeds JA, Meredith TC.	J Bacteriol	10.1128/jb.00792-12	2012
Metabolism	The expanding world of methylotrophic metabolism.	Chistoserdova L, Kalyuzhnaya MG, Lidstrom ME.	Annu Rev Microbiol	10.1146/annurev.micro.091208.073600	2009
Metabolism	Non-identity-mediated CRISPR-bacteriophage interaction mediated via the Csy and Cas3 proteins.	Cady KC, O'Toole GA.	J Bacteriol	10.1128/jb.01411-10	2011
Enzymology	Genomic insights into Mn(II) oxidation by the marine alphaproteobacterium Aurantimonas sp. strain SI85-9A1.	Dick GJ, Podell S, Johnson HA, Rivera-Espinoza Y, Bernier-Latmani R, McCarthy JK, Torpey JW, Clement BG, Gaasterland T, Tebo BM.	Appl Environ Microbiol	10.1128/aem.01656-07	2008
Metabolism	Induction of methyl tertiary butyl ether (MTBE)-oxidizing activity in Mycobacterium vaccae JOB5 by MTBE.	Johnson EL, Smith CA, O'Reilly KT, Hyman MR.	Appl Environ Microbiol	10.1128/aem.70.2.1023-1030.2004	2004
Phylogeny	A Bayesian approach to the evolution of metabolic networks on a phylogeny.	Mithani A, Preston GM, Hein J.	PLoS Comput Biol	10.1371/journal.pcbi.1000868	2010
Metabolism	Effects of soil pH on the biodegradation of chlorpyrifos and isolation of a chlorpyrifos-degrading bacterium.	Singh BK, Walker A, Morgan JA, Wright DJ.	Appl Environ Microbiol	10.1128/aem.69.9.5198-5206.2003	2003
Enzymology	Molecular analysis of a novel methanesulfonic acid monooxygenase from the methylotroph Methylosulfonomonas methylovora.	de Marco P, Moradas-Ferreira P, Higgins TP, McDonald I, Kenna EM, Murrell JC.	J Bacteriol	10.1128/jb.181.7.2244-2251.1999	1999
Metabolism	Duplicate copies of genes encoding methanesulfonate monooxygenase in Marinosulfonomonas methylotropha strain TR3 and detection of methanesulfonate utilizers in the environment.	Baxter NJ, Scanlan J, De Marco P, Wood AP, Murrell JC.	Appl Environ Microbiol	10.1128/aem.68.1.289-296.2002	2002
Enzymology	Biochemical and genetic evidence for meta-ring cleavage of 2,4, 5-trihydroxytoluene in Burkholderia sp. strain DNT.	Haigler BE, Johnson GR, Suen WC, Spain JC.	J Bacteriol	10.1128/jb.181.3.965-972.1999	1999
Metabolism	An orphan cbb₃-type cytochrome oxidase subunit supports Pseudomonas aeruginosa biofilm growth and virulence.	Jo J, Cortez KL, Cornell WC, Price-Whelan A, Dietrich LE.	Elife	10.7554/elife.30205	2017
Metabolism	Structural and functional analysis of the type III secretion system from Pseudomonas fluorescens Q8r1-96.	Mavrodi DV, Joe A, Mavrodi OV, Hassan KA, Weller DM, Paulsen IT, Loper JE, Alfano JR, Thomashow LS.	J Bacteriol	10.1128/jb.00895-10	2011
Metabolism	Identification and characterization of an Azotobacter vinelandii type I secretion system responsible for export of the AlgE-type mannuronan C-5-epimerases.	Gimmestad M, Steigedal M, Ertesvag H, Moreno S, Christensen BE, Espin G, Valla S.	J Bacteriol	10.1128/jb.00236-06	2006
	Highly different levels of natural transformation are associated with genomic subgroups within a local population of Pseudomonas stutzeri from soil.	Sikorski J, Teschner N, Wackernagel W.	Appl Environ Microbiol	10.1128/aem.68.2.865-873.2002	2002
Genetics	Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification.	Wu L, Liu X, Schadt CW, Zhou J.	Appl Environ Microbiol	10.1128/aem.02738-05	2006
	Conservation of the biotin regulon and the BirA regulatory signal in Eubacteria and Archaea.	Rodionov DA, Mironov AA, Gelfand MS.	Genome Res	10.1101/gr.314502	2002
	Ehrlichia chaffeensis tandem repeat proteins and Ank200 are type 1 secretion system substrates related to the repeats-in-toxin exoprotein family.	Wakeel A, den Dulk-Ras A, Hooykaas PJ, McBride JW.	Front Cell Infect Microbiol	10.3389/fcimb.2011.00022	2011
Metabolism	Identification of the Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase regulatory gene (touR) and of its cognate promoter.	Arenghi FL, Pinti M, Galli E, Barbieri P.	Appl Environ Microbiol	10.1128/aem.65.9.4057-4063.1999	1999
Genetics	The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms).	Yang JC, Madupu R, Durkin AS, Ekborg NA, Pedamallu CS, Hostetler JB, Radune D, Toms BS, Henrissat B, Coutinho PM, Schwarz S, Field L, Trindade-Silva AE, Soares CA, Elshahawi S, Hanora A, Schmidt EW, Haygood MG, Posfai J, Benner J, Madinger C, Nove J, Anton B, Chaudhary K, Foster J, Holman A, Kumar S, Lessard PA, Luyten YA, Slatko B, Wood N, Wu B, Teplitski M, Mougous JD, Ward N, Eisen JA, Badger JH, Distel DL.	PLoS One	10.1371/journal.pone.0006085	2009
Metabolism	Construction and use of an ipb DNA module to generate Pseudomonas strains with constitutive trichloroethene and isopropylbenzene oxidation activity.	Berendes F, Sabarth N, Averhoff B, Gottschalk G.	Appl Environ Microbiol	10.1128/aem.64.7.2454-2462.1998	1998
Metabolism	Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1.	Kane SR, Chakicherla AY, Chain PS, Schmidt R, Shin MW, Legler TC, Scow KM, Larimer FW, Lucas SM, Richardson PM, Hristova KR.	J Bacteriol	10.1128/jb.01259-06	2007
Phylogeny	Arsenic Resistance Mechanisms in Pseudomonas mendocina SMSKVR-3 Strain Isolated from Khetri Copper Mines, Rajasthan, India.	Mishra S, Kumar S, Verma SK	Curr Microbiol	10.1007/s00284-021-02749-6	2022
Metabolism	Comparison of aspartate transcarbamoylase regulation in Pseudomonas alcaligenes and Pseudomonas mendocina.	Santiago MF, West TP	J Basic Microbiol	10.1002/jobm.200390008	2003
	Class II LitR serves as an effector of "short" LOV-type blue-light photoreceptor in Pseudomonas mendocina.	Maruyama T, Sumi S, Kobayashi M, Ebuchi T, Kanesaki Y, Yoshikawa H, Ueda K, Takano H	Sci Rep	10.1038/s41598-022-26254-3	2022
Phylogeny	Pseudomonas yangonensis sp. nov., isolated from wound samples of patients in a hospital in Myanmar.	Tohya M, Watanabe S, Teramoto K, Tada T, Kuwahara-Arai K, Mya S, Zin KN, Kirikae T, Tin HH.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004181	2020
	Efficient low-temperature wastewater treatment by Pseudomonas zhanjiangensis sp. nov.: a novel cold-tolerant bacterium isolated from mangrove sediment.	Li M, Hu X, Ni T, Ni Y, Li C, Xue D, Li F.	Front Microbiol	10.3389/fmicb.2024.1491174	2024
Phylogeny	Description of a novel indole-oxidizing bacterium Pseudomonas indoloxydans sp. nov., isolated from a pesticide-contaminated site.	Manickam N, Ghosh A, Jain RK, Mayilraj S.	Syst Appl Microbiol	10.1016/j.syapm.2008.02.002	2008
Phylogeny	Pseudomonas segetis sp. nov., isolated from soil.	Park YD, Yi H, Baik KS, Seong CN, Bae KS, Moon EY, Chun J.	Int J Syst Evol Microbiol	10.1099/ijs.0.63792-0	2006
Phylogeny	Pseudomonas indica sp. nov., a novel butane-utilizing species.	Pandey KK, Mayilraj S, Chakrabarti T.	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1559	2002
Phylogeny	Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov.	Coenye T, Goris J, Spilker T, Vandamme P, LiPuma JJ.	J Clin Microbiol	10.1128/jcm.40.6.2062-2069.2002	2002
Phylogeny	Pseudomonas hydrolytica sp. nov., multiple polymer-degrading bacteria isolated from soil in China.	Zhou S, Wang Y, Xia H, Liu D, Chen S, Li F	Int J Syst Evol Microbiol	10.1099/ijsem.0.004129	2020
Phylogeny	Pseudomonas guguanensis sp. nov., a gammaproteobacterium isolated from a hot spring.	Liu YC, Young LS, Lin SY, Hameed A, Hsu YH, Lai WA, Shen FT, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.047712-0	2013
Phylogeny	Pseudomonas tuomuerensis sp. nov., isolated from a bird's nest.	Xin YH, Zhang DC, Liu HC, Zhou HL, Zhou YG	Int J Syst Evol Microbiol	10.1099/ijs.0.000547-0	2009

References

#12606	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50017
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#35027	; Curators of the CIP;
#44420	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 1781
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#120892	Collection of Institut Pasteur ; Curators of the CIP; CIP 75.21
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas mendocina (DSM 50017, ATCC 25411, CCUG 1781)

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