Pseudomonas alcaligenes (DSM 50342, ATCC 14909, NCTC 10367)

Name: Pseudomonas alcaligenes (DSM 50342, ATCC 14909, NCTC 10367)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12807

Type strain

Strain Designation 1577, 142

Culture col. no. DSM 50342 ATCC 14909 NCTC 10367 CCUG 1425 A CCM 2655 20 more

NCBI tax ID(s) 1215092 43263

Special Collections DSMZ CCUG JCM CIP JMRC

History DSMZ <- ATCC <- R. Hugh, 1577 JCM <-- IAM 12411 <-- S. Ikemoto KS 0021 <-- AJ 2085 <-- ATCC 14909 <-- R. Hugh 1577. CIP <- 1984, LMG <- 1973, B. Contopoulos <- N. J. Palleroni <- R. Y. Stanier, Inst. Pasteur, Paris, France: strain 142

Links

Pseudomonas alcaligenes 1577 is an aerobe, Gram-negative, motile bacterium that was isolated from swimming-pool water.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 13751

LMG 1224,ATCC 14909,CCM 2655,CCUG 1425,DSM 50342,IAM 12411,IMET 11155,JCM 5967,LMG 2120,NCIB 9945,NCPPB 1970,NCTC 10367,CCUG 1425 A,CIP 101034,CCRC 13909,NCIMB 9945,IFO14159,VKM B-2171,CECT 929,CCRC 11893,CFBP 2437,NBRC 14159,NCCB 76044,LMD 76.44,BCRC 11893,BCRC 13909,NBIMCC 2453,NCAIM B.02011,CNCTC 5784,CGMCC 1.1805,CGMCC 1.3361,JCM 20561,CECT 310,CECT 7784

@ref 20215

Last LPSN update 2026-05-29 08:27:53

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas alcaligenes

Full scientific name Pseudomonas alcaligenes Monias 1928 (Approved Lists 1980)

Synonyms (1)

Aquipseudomonas alcaligenes

BacDive ID	Other strains from **Pseudomonas alcaligenes** (11)	Type strain
12806	P. alcaligenes OT, DSM 19550
136365	P. alcaligenes D 160, CIP 104975, CCUG 1316, LMG 6354
137176	P. alcaligenes AB 864, CIP 104974, CCUG 1315, LMG 6353
138133	P. alcaligenes CIP 104976, CCUG 13700, CCUG 13700 B
141217	P. alcaligenes CCUG 226, NCPPB 1959, ATCC 17665, NCTC 8769
141443	P. alcaligenes CCUG 1868
141704	P. alcaligenes CCUG 5004
141779	P. alcaligenes CCUG 6697 B
141856	P. alcaligenes CCUG 7819
146799	P. alcaligenes CCUG 32134
148961	P. alcaligenes CCUG 36648

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116206	negative	rod-shaped
125439	negative		98.208
125438	negative		98.5

Pigmentation

@ref	Production	Name
116206		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12715	REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
40285	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
116206	CIP Medium 3	Medium recipe at CIP
116206	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12715	positive	growth	26
40285	positive	growth	30
44372	positive	growth	30-37
67770	positive	growth	30
116206	positive	growth	10-41
116206	negative	growth	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
44372	aerobe
116206	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.681

Compound production

12715

Compoundpoly(ß-hydroxyoctanoic acid)

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116206	NaCl	positive	growth	0-2 %
116206	NaCl		growth	4 %
116206	NaCl		growth	6 %
116206	NaCl		growth	8 %
116206	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
116206	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
116206	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
116206	17632 ChEBI	nitrate	+	reduction
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
116206	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116206	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
116206	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116206	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116206	amylase	-
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
116206	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116206	caseinase	-	3.4.21.50
116206	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
116206	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116206	gelatinase	-
68369	gelatinase	-		from API 20NE
116206	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
116206	lipase	+
68382	lipase (C 14)	+		from API zym
116206	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116206	ornithine decarboxylase	-	4.1.1.17
116206	oxidase	+
116206	protease	+
68382	trypsin	+	3.4.21.4	from API zym
116206	tryptophan deaminase	-
116206	tween esterase	+
116206	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

44372

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	30.6	17.824
C16:1 ω7c	28.7	15.819
C16:0	12.6	16
C12:0	6.7	12
C10:0 3OH	5	11.423
C14:0	4.6	14
C10:0	3.4	10
C12:0 3OH	3	13.455
C15:0	1.8	15
C17:1 ω8c	1.3	16.792
C17:1 ω6c	0.7	16.862
C18:2 ω6,9c/C18:0 ANTE	0.7	17.724
C11:0	0.6	11
C13:0	0.4	13

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116206	-	+	+	+	+	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
44372	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	+
12715	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116206	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	+	+	+	+	+	+	-	+	-	-	-	-	+	+	+	+	+	+	-	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	#Water reservoir (Aquarium/pool)
#Environmental	#Aquatic	-

Isolation

@ref	Sample type	Sampling date	Isolation date
12715	swimming-pool water
44372	Water,swimming pool	1961
67770	Swimming-pool water
116206	Environment, Swimming-pool water		1961

Taxonmaps

69479

Global distribution of 16S sequence Z76653 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	384
Soil Samples	779
Animal Samples	276
Plant Samples	161
Total Samples	1600

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12715	2	Risk group (German classification) According to TRBA 466
116206	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	46338_H02 assembly for Aquipseudomonas alcaligenes NCTC10367	contig	GCA_900455475	43263.13	8035338204	43263	71.1
67770	ASM46710v1 assembly for Aquipseudomonas alcaligenes NBRC 14159	contig	GCA_000467105	1215092.3	2600255064	1215092	47.36

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas alcaligenes strain ATCC 14909 16S ribosomal RNA gene, partial sequence	AF094721	1459	43263
20218	Pseudomonas alcaligenes strain BCRC 13909 16S-23S ribosomal RNA intergenic spacer, complete sequence	EU014521	499	43263
20218	Pseudomonas alcaligenes culture-collection CFBP:2437 16S ribosomal RNA gene, partial sequence	HM190231	1442	43263
20218	Pseudomonas alcaligenes 16S rRNA gene, complete sequence	D84006	1530	43263
20218	P.alcaligenes 16S rRNA gene	Z76653	1492	43263
20218	Pseudomonas alcaligenes gene for 16S rRNA, partial sequence, strain: NBRC 14159	AB680567	1462	43263
124043	Pseudomonas alcaligenes strain ATCC 14909 16S ribosomal RNA gene, partial sequence.	OQ619146	1502	43263
124043	Pseudomonas alcaligenes strain ATCC 14909-1 16S ribosomal RNA gene, partial sequence.	MG015933	462	43263
124043	Pseudomonas alcaligenes strain ATCC 14909 16S ribosomal RNA gene, partial sequence.	MN272342	1391	43263

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 46338_H02 assembly for Aquipseudomonas alcaligenes NCTC10367
NCBI: GCA_900455475

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.36	no
125439	motility	BacteriaNetⓘ	yes	88.39	no
125439	gram_stain	BacteriaNetⓘ	negative	98.21	no
125439	spore_formation	BacteriaNetⓘ	no	99.68	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas alcaligenes NBRC 14159
PATRIC: 1215092.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	95.37	no
125438	spore-forming	spore-formingⓘ	no	88.28	no
125438	aerobic	aerobicⓘ	yes	89.31	yes
125438	thermophilic	thermophileⓘ	no	99.48	yes
125438	flagellated	motile2+ⓘ	yes	89.52	no

Literature

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	Stabilizing behaviors of Pseudomonas putida and Pseudomonas alcaligenes bacteria on heavy metal ions in electrolytic manganese residue.	Chen H, Li X, Zhao Y, Zhang Y.	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2024.117462	2025
	Bacterial assessment, thermal resilience and antibiotic resistance profiles of bacterial contaminants in retail fish and meat	Noorzai AQ, Abro SH, Abro R, Kalhoro DH, Dasti MI, Alhimaidi AR, Ammari AA, Abdel-Maksoud MA, Kiani BH, Jamali FH.	Lebensm Wiss Technol		2025
Genetics	Antibiotic resistance genes risks in relation to host pathogenicity and mobility in a typical hospital wastewater treatment process.	Xu C, Hu C, Li F, Liu W, Xu Y, Shi D.	Environ Res	10.1016/j.envres.2024.119554	2024
	Heterologous expression and foldase-assisted refolding of LipGoM, a Pseudomonas lipase from family I.	Garcia-Villegas EL, Hidalgo-Manzano IA, Pardo-Lopez L, Rudino-Pinera E.	Biochem Biophys Rep	10.1016/j.bbrep.2025.102256	2025
	Study on mechanism of removal of sudden Tetracycline by compound modified biological sand filtration process.	Nie Y, Zhang T, Xu Y, Du Y, Ai J, Xue N.	J Environ Manage	10.1016/j.jenvman.2024.120709	2024
Pathogenicity	From disinfection to pathogenicity: Occurrence, resistome risks and assembly mechanism of biocide and metal resistance genes in hospital wastewaters.	Xu C, Zhang Y, Hu C, Shen C, Li F, Xu Y, Liu W, Shi D.	Environ Pollut	10.1016/j.envpol.2024.123910	2024
Genetics	Free-living lifestyle preferences drive the antibiotic resistance promotion during drinking water chlorination.	Jia S, Wang S, Zhuang Y, Gao L, Zhang X, Ye L, Zhang XX, Shi P.	Water Res	10.1016/j.watres.2023.120922	2024
	Selection of aquatic microbiota exposed to the herbicides flufenacet and metazachlor.	Wijewardene L, Schwenker JA, Friedrichsen M, Jensen A, Lobel F, Austen T, Ulrich U, Fohrer N, Bang C, Waschina S, Holzel CS.	Environ Microbiol	10.1111/1462-2920.16535	2023
	Microbial degradation mechanism of historical silk revealed by proteomics and metabolomics.	Pan L, Ding C, Deng Y, Chen H, Yang H, Wang B, Zhou Y, Wang B.	Anal Methods	10.1039/d3ay01033c	2023
	Emergence of carbapenem-resistant Pseudomonas alcaligenes and Pseudomonas paralcaligenes clinical isolates with plasmids harbouring bla _IMP-1 in Japan.	Ono E, Tohya M, Tada T, Hishinuma T, Watanabe S, Kuwahara-Arai K, Kirikae T.	J Med Microbiol	10.1099/jmm.0.001684	2023
Pathogenicity	Dynamic multi-omics mechanisms underpinning retinol tolerance: stage-specific reconstruction of skin barrier function and host-microbiome metabolic interactions.	Huang Y, Zhou Q, Gui M, Guo D, Cheng J, Ma W, Shu P, Liu X.	Front Microbiol	10.3389/fmicb.2025.1668712	2025
Biotechnology	Unveiling a novel exopolysaccharide produced by Pseudomonas alcaligenes Med1 isolated from a Chilean hot spring as biotechnological additive.	Sarkar S, Cabrera-Barjas G, Singh RN, Fabi JP, Breig SJM, Tapia J, Sani RK, Banerjee A.	Sci Rep	10.1038/s41598-024-74830-6	2024
	Evaluation of Single-Pass Disinfection Performance of Far-UVC Light on Airborne Microorganisms in Duct Flows.	Zhang H, Lai ACK.	Environ Sci Technol	10.1021/acs.est.2c04861	2022
	Alginate-like exopolysaccharides extracted from different waste sludges exhibit varying physicochemical and material properties.	Rehman ZU, Ghaani M, Mohamed AYA, Gallagher J, Saikaly PE, Ali M.	Front Microbiol	10.3389/fmicb.2024.1493782	2024
	Incidence, Clinical Profile, and Management of Keratitis Caused by Uncommon Species of Pseudomonas at a Tertiary Eye Care Center.	Thamizhselvi S, Pooja A, Prajna L, Rameshkumar G, Prajna NV, Karpagam R.	Cornea	10.1097/ico.0000000000003194	2023
	Characterization of Pathogenic Pseudomonas alcaligenes Isolated from Koi Carp in China.	Bai J, Huo Y, Hu X, Lu A, Sun J.	J Aquat Anim Health	10.1002/aah.10141	2021
Genetics	Shotgun metagenomic sequencing in culture negative microbial keratitis.	Borroni D, Bonzano C, Sanchez-Gonzalez JM, Rachwani-Anil R, Zamorano-Martin F, Pereza-Nieves J, Traverso CE, Garcia Lorente M, Rodriguez-Calvo-de-Mora M, Esposito A, Godin F, Rocha-de-Lossada C.	Eur J Ophthalmol	10.1177/11206721221149077	2023
	A Probiotic Amylase Blend Positively Impacts Gut Microbiota Modulation in a Randomized, Placebo-Controlled, Double-Blind Study.	Ghannoum MA, Elshaer M, Al-Shakhshir H, Retuerto M, McCormick TS.	Life (Basel)	10.3390/life14070824	2024
	Molecular and biochemical characterization of novel PAM-like MBL variants, PAM-2 and PAM-3, from clinical isolates of Pseudomonas tohonis.	Yamada K, Yoshizumi A, Nagasawa T, Aoki K, Sasaki M, Murakami H, Morita T, Ishii Y, Tateda K.	J Antimicrob Chemother	10.1093/jac/dkac210	2022
	Biosynthesis of polyhydroxyalkanoate from food waste oil by Pseudomonas alcaligenes with simultaneous energy recovery from fermentation wastewater.	Pan L, Li J, Wang R, Wang Y, Lin Q, Li C, Wang Y.	Waste Manag	10.1016/j.wasman.2021.06.008	2021
	Diffusely distributed centrilobular micronodules and branching opacities as the main chest computed tomography manifestations in a patient with humidifier lung.	Nakane C, Teshima T, Otake R, Nakagawa E, Kishimoto E, Suzuki K, Inaba R, Murakami Y, Aoshima Y, Nishimoto K, Matsushima S, Harada M, Imokawa S.	Respir Med Case Rep	10.1016/j.rmcr.2024.102061	2024
	Anopheline mosquitoes are protected against parasite infection by tryptophan catabolism in gut microbiota.	Feng Y, Peng Y, Song X, Wen H, An Y, Tang H, Wang J.	Nat Microbiol	10.1038/s41564-022-01099-8	2022
	A Novel PCR Panel for Bacterial Detection in Lower Respiratory Tract Infections: A Comparative Study with Culture Results.	Komec S, Durmus MA, Ceylan AN, Korkusuz R.	Pathogens	10.3390/pathogens14101017	2025
	Antibacterial activity of marine microalgae extracts against pathogen of Siamese fighting fish (Betta splendens).	Manklinniam P, Phunpruch S, Worananthakij W.	Open Vet J	10.5455/ovj.2025.v15.i7.17	2025
	Optimizing bacteriophage treatment of resistant Pseudomonas.	Ulrich L, Steiner LX, Giez C, Lachnit T.	mSphere	10.1128/msphere.00707-23	2024
	Optimization of Polystyrene Biodegradation by Bacillus cereus and Pseudomonas alcaligenes Using Full Factorial Design.	Miloloza M, Ukic S, Cvetnic M, Bolanca T, Kucic Grgic D.	Polymers (Basel)	10.3390/polym14204299	2022
	Co-expression of Pseudomonas alcaligenes lipase and its specific foldase in Pichia pastoris by a dual expression cassette strategy.	Zhang Z, Zhang X, Hao H, Gong X, Gu X.	Protein Expr Purif	10.1016/j.pep.2020.105721	2020
	Bambara Nut Root-Nodules Bacteria from a Semi-Arid Region of South Africa and Their Plant Growth-Promoting Traits.	Ayangbenro AS, Adem MR, Babalola OO.	Int J Microbiol	10.1155/2023/8218721	2023
	Bacterial diversity in water from Xifeng Hot Spring in China.	Wu L, Long H, Huang S, Niu X, Li S, Yu X, You L, Ran X, Wang J.	Braz J Microbiol	10.1007/s42770-023-01070-7	2023
	Nosocomial transmission of a bla_VIM-2 carbapenemase integron between isolates of two different Pseudomonas species.	Buchler AC, Wuthrich D, Wicki Jauslin M, Egli A, Widmer AF.	Infect Control Hosp Epidemiol	10.1017/ice.2021.39	2022
	Multiple Copies of Tigecycline Gene Cluster tmexC6D6-toprJ1b in Pseudomonas mendocina in a Swine Farm.	Wu R, Che Y, Wang L, Chen Q, He B, Qiu J, Wu X, Chen R, Liu Y, Zhou L.	Antibiotics (Basel)	10.3390/antibiotics14050500	2025
	Using PacBio sequencing to investigate the effects of treatment with lactic acid bacteria or antibiotics on cow endometritis	Yang L, Huang W, Yang C, Ma T, Hou Q, Sun Z, Zhang H.	Electron J Biotechnol		2021
	Effects of Salinity Fluctuation on Antimicrobial Resistance and Virulence Factor Genes of Low and High Nucleic Acid-Content Bacteria in a Marine Environment.	Hu W, Zhou X, Liu Y, Zhang Y, Wang Y.	Microorganisms	10.3390/microorganisms13071710	2025
Genetics	Comparative metagenomic analysis from Sundarbans ecosystems advances our understanding of microbial communities and their functional roles.	Das BK, Chakraborty HJ, Kumar V, Rout AK, Patra B, Das SK, Behera BK.	Sci Rep	10.1038/s41598-024-67240-1	2024
	Screening of a New Kosakonia Species for Polyethylene Biodegradation.	Cho JH, Yun SD, Kim HW, Seo MJ, Sung BH, Yeom SJ.	J Microbiol Biotechnol	10.4014/jmb.2411.11058	2025
	Metagenomic analysis of blood microbiota alterations: insights into HIV progression and immune restoration.	Chen Y, Zhang R, Wen J, Zhao J, Zhang J.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1619059	2025
	Development of a real-time loop-mediated isothermal amplification method for monitoring Pseudomonas lurida in raw milk throughout the year of pasture.	Zhang S, Hu L, Xue Y, Zhang D, Zhang Y, Wang S.	Front Microbiol	10.3389/fmicb.2023.1133077	2023
Metabolism	Co-production of 1,3-Propanediol and 2,3-Butanediol from Waste Lard by Co-cultivation of Pseudomonas alcaligenes and Klebsiella pneumoniae.	Li Y, Zhu S, Ge X.	Curr Microbiol	10.1007/s00284-019-01628-5	2019
	Prediction of lipase-specific foldase-dependence in bacterial lipase subfamilies I.1 and I.2.	Hioki T.	BMC Genomics	10.1186/s12864-025-11717-4	2025
	Disinfection by in-duct ultraviolet lamps under different environmental conditions in turbulent airflows.	Zhang H, Jin X, Nunayon SS, Lai ACK.	Indoor Air	10.1111/ina.12642	2020
	Multi-year comparison of VITEK MS performance for identification of rarely encountered pathogenic Gram-negative organisms (GNOs) in a large integrated Canadian healthcare region.	Church DL, Griener T, Gregson D.	Microbiol Spectr	10.1128/spectrum.02276-24	2024
	A Case of Pseudomonas straminea Blood Stream Infection in an Elderly Woman with Cellulitis.	Bohm L, Schaller ME, Balczun C, Kruger A, Schummel T, Ammon A, Klein N, Helbing DL, Eming R, Fuchs F.	Infect Dis Rep	10.3390/idr16040053	2024
	A case report of Pseudomonas citronellolis and Escherichia coli isolated from acute suppurative appendicitis: reveals the potential intestinal colonization and pathogenicity of Pseudomonas citronellolis.	Lin Y, Li Y, Lin C.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1280188	2024
	Halotolerant bacteria isolated from the soils of Indian mangrove ecosystem for metal removal and NPK enhancement.	Mitra S, Dey J, Sarkar S, Banik P.	Sci Rep	10.1038/s41598-025-07839-0	2025
Genetics	Comparative Genomic Analysis of Three Pseudomonas Species Isolated from the Eastern Oyster (Crassostrea virginica) Tissues, Mantle Fluid, and the Overlying Estuarine Water Column.	Pathak A, Stothard P, Chauhan A.	Microorganisms	10.3390/microorganisms9030490	2021
Genetics	Metagenomic assembly provides a deep insight into the antibiotic resistome alteration induced by drinking water chlorination and its correlations with bacterial host changes.	Jia S, Wu J, Ye L, Zhao F, Li T, Zhang XX.	J Hazard Mater	10.1016/j.jhazmat.2019.120841	2019
	Arsenic and mercury tolerant rhizobacteria that can improve phytoremediation of heavy metal contaminated soils.	Rojas-Solis D, Larsen J, Lindig-Cisneros R.	PeerJ	10.7717/peerj.14697	2023
Enzymology	Statistical optimization of arsenic biosorption by microbial enzyme via Ca-alginate beads.	Banerjee S, Banerjee A, Sarkar P.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1080/10934529.2017.1409009	2018
	Multiplex PCR-based next generation sequencing as a novel, targeted and accurate molecular approach for periprosthetic joint infection diagnosis.	Huang C, Huang Y, Wang Z, Lin Y, Li Y, Chen Y, Chen X, Zhang C, Li W, Zhang W, Fang X, Huang Z.	Front Microbiol	10.3389/fmicb.2023.1181348	2023
Genetics	Influence of Seasonality and Pollution on the Presence of Antibiotic Resistance Genes and Potentially Pathogenic Bacteria in a Tropical Urban River	Barrantes-Jimenez K, Mendoza-Guido B, Morales-Mora E, Rivera-Montero L, Montiel-Mora J, Chacon-Jimenez L, Rojas-Jimenez K, Arias-Andres M.	Antibiotics (Basel)		2025
	Rhizosphere microbial ecological characteristics of strawberry root rot.	Zhang M, Kong Z, Fu H, Shu X, Xue Q, Lai H, Guo Q.	Front Microbiol	10.3389/fmicb.2023.1286740	2023
	Cytobacillus sp. Strain HMBC3 from Saudi Arabian Soil Degrades Low-Density Polyethylene.	Alamer NJ, Aldayel MF, Khalifa A.	J Microbiol Biotechnol	10.4014/jmb.2409.09023	2024
	Bridging Microbial Biocontrol and Phytochemical Biopesticides: Synergistic Approaches for Sustainable Crop Protection.	Rezaee Danesh Y, Mulet JM, Porcel R.	Plants (Basel)	10.3390/plants14223453	2025
Pathogenicity	New insights into antibiotic resistome in drinking water and management perspectives: A metagenomic based study of small-sized microbes.	Ma L, Li B, Zhang T.	Water Res	10.1016/j.watres.2018.12.069	2019
	Disinfection efficacy of ultraviolet germicidal irradiation on airborne bacteria in ventilation ducts.	Yang Y, Zhang H, Nunayon SS, Chan V, Lai AC.	Indoor Air	10.1111/ina.12504	2018
	Bioremediation potential of Pseudomonas genus isolates from residual water, capable of tolerating lead through mechanisms of exopolysaccharide production and biosorption.	Velez JMB, Martinez JG, Ospina JT, Agudelo SO.	Biotechnol Rep (Amst)	10.1016/j.btre.2021.e00685	2021
Metabolism	Overexpression of a bacterial mercury transporter MerT in Arabidopsis enhances mercury tolerance.	Xu S, Sun B, Wang R, He J, Xia B, Xue Y, Wang R.	Biochem Biophys Res Commun	10.1016/j.bbrc.2017.06.073	2017
	Long-term outcomes of laser dacryoplasty combined with intubation using a new silicon tube in patients with lacrimal duct obstruction.	Fan YM, Yin XX, Gao N, Liu Z.	Int J Ophthalmol	10.18240/ijo.2023.09.14	2023
	Aetiology and prognosis of community-acquired pneumonia at the Adult University Teaching Hospital in Zambia.	Ziko LM, Hoffman TW, Fwoloshi S, Chanda D, Nampungwe YM, Patel D, Bobat H, Moonga A, Chirwa L, Hachaambwa L, Mateyo KJ.	PLoS One	10.1371/journal.pone.0271449	2022
	Vehicle transmission of antibiotic-resistant pathogens mediated by plastic debris in aquatic ecosystems.	Ferheen I, Spurio R, Marcheggiani S.	iScience	10.1016/j.isci.2024.110026	2024
	Assessing Antibiotic-Resistant Genes in University Dormitory Washing Machines	Chen W, Zhang Y, Mi J.	Microorganisms		2024
	VagiBIOM Lactobacillus suppository improves vaginal health index in perimenopausal women with bacterial vaginosis: a randomized control trial.	Vivekanandan V, Khan ZH, Venugopal G, Musunuru B, Mishra P, Srivastava S, Ramadass B, Subhadra B.	Sci Rep	10.1038/s41598-024-53770-1	2024
	Bacterial contamination of mobile handwashing stations in hospital settings in the Democratic Republic of the Congo.	Kalema J, Heroes AS, Kahindo I, Hyland P, Muzinga J, Lunguya O, Jacobs J.	Antimicrob Resist Infect Control	10.1186/s13756-024-01506-1	2024
	Aaqueous exposure to silver nanoparticles synthesized by abalone viscera hydrolysates promotes the growth, immunity and gut health of zebrafish (Danio rerio).	Ni J, Yang Z, Zhang Y, Ma Y, Xiong H, Jian W.	Front Microbiol	10.3389/fmicb.2022.1048216	2022
	Fecal microbiome analysis uncovers hidden stress effects of low stocking density on rainbow trout.	Raymo G, Januario F, Ali A, Ahmed RO, Al-Tobasei R, Salem M.	Anim Microbiome	10.1186/s42523-024-00344-1	2024
	The Mexican giant maize of Jala landrace harbour plant-growth-promoting rhizospheric and endophytic bacteria.	Rios-Galicia B, Villagomez-Garfias C, De la Vega-Camarillo E, Guerra-Camacho JE, Medina-Jaritz N, Arteaga-Garibay RI, Villa-Tanaca L, Hernandez-Rodriguez C.	3 Biotech	10.1007/s13205-021-02983-6	2021
	ESKAPEE Pathogen Biofilm Control on Surfaces with Probiotic Lactobacillaceae and Bacillus species.	Neidhofer C, Rathore K, Parcina M, Sieber MA.	Antibiotics (Basel)	10.3390/antibiotics12050871	2023
Enzymology	[Extraction, Purification and Identification of a Dexamethasone-degrading Enzymes Generated by Pseudomonas Alcaligenes].	Zhu L, Yang Z, Yang Q, Shi Z, Deng X.	Sheng Wu Yi Xue Gong Cheng Xue Za Zhi		2015
	Lipolytic activity of carotenogenic yeast isolated from the polish ecosystem.	Kot AM, Buczynski P, Pobiega K, Gientka I, Blazejak S.	Antonie Van Leeuwenhoek	10.1007/s10482-025-02115-7	2025
	Pseudomonas alcaligenes infection and mortality in cultured Chinese sturgeon, Acipenser sinensis	Xu J, Zeng X, Jiang N, Zhou Y, Zeng L.	Aquaculture	10.1016/j.aquaculture.2015.04.014	2015
	In-vitro activity of the novel beta-lactam/beta-lactamase inhibitor combinations and cefiderocol against carbapenem-resistant Pseudomonas spp. clinical isolates collected in Switzerland in 2022.	Le Terrier C, Bouvier M, Kerbol A, Dell'Acqua C, Nara Network members, Nordmann P, Poirel L.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-024-04994-6	2025
	Unveiling the ecological processes driving soil and lichen microbiome assembly along an urbanization gradient.	Mawarda PC, van der Kaaij R, Dini-Andreote F, Duijker D, Stech M, Speksnijder AG.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00736-4	2025
	Acquired bla_VIM and bla_GES Carbapenemase-Encoding Genes in Pseudomonas aeruginosa: A Seven-Year Survey Highlighting an Increasing Epidemiological Threat.	Martinez-Zavaleta MG, Fernandez-Rodriguez D, Hernandez-Duran M, Colin-Castro CA, de Lourdes Garcia-Hernandez M, Becerra-Lobato N, Franco-Cendejas R, Lopez-Jacome LE.	Pathogens	10.3390/pathogens12101256	2023
	Bacterial Diversity and Succession in the Presence of Steel and Effects on Corrosion.	Nolan L, Risser T, Catubig R, Venugopal A, Glasson J, Callahan DL, Somers A, Ackland ML, Michalczyk A.	Environ Microbiol Rep	10.1111/1758-2229.70119	2025
	eXtreme gradient boosting-based classification of bacterial mixtures in water and milk using wireless microscopic imaging of quorum sensing peptide-conjugated particles.	Liang Y, Lee MH, Zhou A, Khanthaphixay B, Hwang DS, Yoon JY.	Biosens Bioelectron	10.1016/j.bios.2023.115144	2023
Pathogenicity	Sapindus saponins' impact on hydrocarbon biodegradation by bacteria strains after short- and long-term contact with pollutant.	Smulek W, Zdarta A, Luczak M, Krawczyk P, Jesionowski T, Kaczorek E.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2016.02.049	2016
	Recovery of clinically relevant multidrug-resistant Klebsiella pneumoniae lineages from wastewater in Kumasi Metropolis, Ghana.	Ekhosuehi A, Ikhimiukor OO, Essandoh HMK, Asiedu NY, Aighewi IT, Sunmonu GT, Odih EE, Oaikhena AO, Cyril-Okoh D, Yeboah C, Okeke IN.	Environ Microbiol Rep	10.1111/1758-2229.70018	2024
	Regulatory Element Analysis and Comparative Genomics Study of Heavy Metal-Resistant Genes in the Complete Genome of Cupriavidus gilardii CR3.	Dibbisa D, Daba T, Mohammed S.	Bioinform Biol Insights	10.1177/11779322241299905	2024
Enzymology	Establishment and evaluation of a rapid method for the detection of bacterial pneumonia in hospitalized patients via multiplex PCR-capillary electrophoresis (MPCE).	Wang J, Zhao P, Zhao M, Zhang D, Chen S, Liu Y, Gao Y, Tie Y, Feng Z.	Microbiol Spectr	10.1128/spectrum.01202-24	2024
	Plant debris are hotbeds for pathogenic bacteria on recreational sandy beaches.	Suzuki Y, Shimizu H, Kuroda T, Takada Y, Nukazawa K.	Sci Rep	10.1038/s41598-021-91066-w	2021
	Polymer-Degrading Enzymes of Pseudomonas chloroaphis PA23 Display Broad Substrate Preferences.	Mohanan N, Wong MC, Budisa N, Levin DB.	Int J Mol Sci	10.3390/ijms24054501	2023
Metabolism	Isolation and identification of dexamethasone sodium phosphate degrading Pseudomonas alcaligenes.	Yi W, Zhibang Y, Lili Z, Zhongquan S, Lianju M, Ziwei T, Renju J.	J Basic Microbiol	10.1002/jobm.201300912	2015
	Improved Molecular Diagnosis and Culture of the Emerging Heteropathotype Enterohemorrhagic Escherichia coli O80:H2 Using Its Non-Melibiose-Fermenting and Antibiotic-Resistance Properties.	Bizot E, Cointe A, Smadja N, Sergentet D, Lefevre S, Weill FX, Levy C, Cohen R, Mariani-Kurkdjian P, Bonacorsi S.	J Clin Microbiol	10.1128/jcm.01530-21	2022
	High Frequency of Antibiotic Resistance Genes (ARGs) in the Lerma River Basin, Mexico.	Tapia-Arreola AK, Ruiz-Garcia DA, Rodulfo H, Sharma A, De Donato M.	Int J Environ Res Public Health	10.3390/ijerph192113988	2022
	Shift of human pathogen community composition and their potential human health risk after supply suspension in tap water.	Liu S, Li Q, Jiang R, Liu P, Zhang XX.	Sci Rep	10.1038/s41598-023-39225-z	2023
Enzymology	The lower respiratory tract microbiome of critically ill patients with COVID-19.	Gaibani P, Viciani E, Bartoletti M, Lewis RE, Tonetti T, Lombardo D, Castagnetti A, Bovo F, Horna CS, Ranieri M, Viale P, Re MC, Ambretti S.	Sci Rep	10.1038/s41598-021-89516-6	2021
	Isolation and Identification of Bacteria with Surface and Antibacterial Activity from the Gut of Mediterranean Grey Mullets.	Floris R, Sanna G, Mura L, Fiori M, Culurgioni J, Diciotti R, Rizzo C, Lo Giudice A, Lagana P, Fois N.	Microorganisms	10.3390/microorganisms9122555	2021
Enzymology	A combination of site-directed mutagenesis and chemical modification to improve diastereopreference of Pseudomonas alcaligenes lipase.	Chen H, Wu J, Yang L, Xu G.	Biochim Biophys Acta	10.1016/j.bbapap.2013.08.011	2013
	Sequential Treatment by Ozonation and Biodegradation of Pulp and Paper Industry Wastewater to Eliminate Organic Contaminants.	Amacosta J, Poznyak T, Siles S, Chairez I.	Toxics	10.3390/toxics12020138	2024
	Cell wall components of gut commensal bacteria stimulate peritrophic matrix formation in malaria vector mosquitoes through activation of the IMD pathway.	Song X, Zhou H, Wang J.	PLoS Biol	10.1371/journal.pbio.3002967	2025
Biotechnology	Versatile biocatalyst: lipase from Streptomyces gobitricini for ester synthesis and detergent innovation	Alzahrani A, Krayem N, Alonazi M, Al-Ghamdi J, Horchani H, Ben Bacha A.	Front Bioeng Biotechnol		2025
	Studying the Association between Antibiotic Resistance Genes and Insertion Sequences in Metagenomes: Challenges and Pitfalls.	Galiot L, Monger XC, Vincent AT.	Antibiotics (Basel)	10.3390/antibiotics12010175	2023
	Stable States of a Microbial Community Are Formed by Dynamic Metabolic Networks with Members Functioning to Achieve Both Robustness and Plasticity.	Honjo M, Suzuki K, Katai J, Tashiro Y, Aoyagi T, Hori T, Okada T, Saito Y, Futamata H.	Microbes Environ	10.1264/jsme2.me23091	2024
	Characteristics and phylogenetic distribution of megaplasmids and prediction of a putative chromid in Pseudomonas aeruginosa.	Wang N, Zheng X, Leptihn S, Li Y, Cai H, Zhang P, Wu W, Yu Y, Hua X.	Comput Struct Biotechnol J	10.1016/j.csbj.2024.04.002	2024
Biotechnology	Molecular Cloning of the Extracellular Lipases of Bacillus Amyloliquefaciens Isolated from Agrifood Wastes.	Khodakarami Fard Z, Shirazinejad A, Mohammadi M, Hashemi SMB.	Iran J Biotechnol	10.30498/ijb.2024.417315.3797	2024
	Occurrence of Extended Spectrum Cephalosporin-, Carbapenem- and Colistin-Resistant Gram-Negative Bacteria in Fresh Vegetables, an Increasing Human Health Concern in Algeria.	Chelaghma W, Loucif L, Bendjama E, Cherak Z, Bendahou M, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics11080988	2022
	Insights into the Biocontrol Function of a Burkholderia gladioli Strain against Botrytis cinerea.	Wang D, Luo WZ, Zhang DD, Li R, Kong ZQ, Song J, Dai XF, Alkan N, Chen JY.	Microbiol Spectr	10.1128/spectrum.04805-22	2023
Genetics	Genotype-Dependent Response of Root Microbiota and Leaf Metabolism in Olive Seedlings Subjected to Drought Stress.	Azri R, Lamine M, Bensalem-Fnayou A, Hamdi Z, Mliki A, Ruiz-Lozano JM, Aroca R.	Plants (Basel)	10.3390/plants13060857	2024
	Pichia kudriavzevii UNJCC Y-137 and Candida tropicalis UNJCC Y-140 isolated from Durio kutejensis as potential probiotic agents.	Sukmawati D, Adisyahputra A, Al-Ani LKT, Al Husna SN, Afifah ZN, Sriherwanto C, Surono S, Setiarto RHB, Nurjayadi M, Rahman RA.	Food Sci Biotechnol	10.1007/s10068-024-01609-w	2024
Genetics	Alleviating arsenic stress affecting the growth of Vigna radiata through the application of Klebsiella strain ASBT-KP1 isolated from wastewater.	Prasad M, Madhavan A, Babu P, Salim A, Subhash S, Nair BG, Pal S.	Front Microbiol	10.3389/fmicb.2024.1484069	2024
Enzymology	Killer toxin from a novel killer yeast Pichia kudriavzevii RY55 with idiosyncratic antibacterial activity.	Bajaj BK, Raina S, Singh S.	J Basic Microbiol	10.1002/jobm.201200187	2013
	The Effect of Temperature and Storage Duration on the Quality and Attributes of the Breast Meat of Hens after Their Laying Periods.	Augustynska-Prejsnar A, Hanus P, Ormian M, Kacaniova M, Sokolowicz Z, Topczewska J.	Foods	10.3390/foods12234340	2023
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	Genome Sequence of a Strain of the Human Pathogenic Bacterium Pseudomonas alcaligenes That Caused Bloodstream Infection.	Suzuki M, Suzuki S, Matsui M, Hiraki Y, Kawano F, Shibayama K.	Genome Announc	10.1128/genomea.00919-13	2013
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Genetics	Isolation, Genomics-Based and Biochemical Characterization of Bacteriocinogenic Bacteria and Their Bacteriocins, Sourced from the Gastrointestinal Tract of Meat-Producing Pigs.	Sevillano E, Lafuente I, Pena N, Cintas LM, Munoz-Atienza E, Hernandez PE, Borrero J.	Int J Mol Sci	10.3390/ijms252212210	2024
Genetics	Genotypic characterization of soil bacteria in the Umm Al-Namil Island, Kuwait.	Alown F, Alsharidah A, Shamsah S.	Saudi J Biol Sci	10.1016/j.sjbs.2021.03.060	2021
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Enzymology	Effect of physicochemical parameters on enzymatic biodecaffeination during tea fermentation.	Babu VR, Thakur MS, Patra S.	Appl Biochem Biotechnol	10.1007/s12010-011-9408-7	2012
Metabolism	Non-ionic polysorbate surfactants: alternative inducers of medium-chain-length poly(3-hydroxyalkanoates) (MCL-PHAs) for production of extracellular MCL-PHA depolymerases.	Seo BS, Kim DY, Ni YY, Son KH, Park HY, Rhee YH.	Bioresour Technol	10.1016/j.biortech.2012.06.118	2012
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Metabolism	Denitrification of industrial wastewater: Influence of glycerol addition on metabolic activity and community shifts in a microbial consortium.	Cyplik P, Juzwa W, Marecik R, Powierska-Czarny J, Piotrowska-Cyplik A, Czarny J, Drozdzynska A, Chrzanowski L.	Chemosphere	10.1016/j.chemosphere.2013.09.083	2013
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Biotechnology	Spoilage potentials and antimicrobial resistance of Pseudomonas spp. isolated from cheeses.	Arslan S, Eyi A, Ozdemir F.	J Dairy Sci	10.3168/jds.2011-4676	2011
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Biotechnology	Biosorptive Potential of Pseudomonas species RY12 Toward Zinc Heavy Metal in Agriculture Soil Irrigated with Contaminated Waste Water.	Yasmin R, Zafar MS, Tahir IM, Asif R, Asghar S, Raza SK.	Dose Response	10.1177/15593258221117352	2022
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Pathogenicity	Prevalence and characterization of carbapenem-resistant bacteria in water bodies in the Los Angeles-Southern California area.	Harmon DE, Miranda OA, McCarley A, Eshaghian M, Carlson N, Ruiz C.	Microbiologyopen	10.1002/mbo3.692	2019
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Enzymology	Identification of Cyclic Dipeptides and a New Compound (6-(5-Hydroxy-6-methylheptyl)-5,6-dihydro-2H-pyran-2-one) Produced by Streptomyces fungicidicus against Alternaria solani.	Liu H, An M, Si H, Shan Y, Xu C, Hu G, Xie Y, Liu D, Li S, Qiu R, Zhang C, Wu Y.	Molecules	10.3390/molecules27175649	2022
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	A survey of public restrooms microbial contamination in Tehran city, capital of Iran, during 2019.	Matini E, Shayeghi F, Vaghar ME, Nematian J, Hosseini SS, Mojri N, Taherabadi NT, Hakimi R, Ahmadi N, Badkoubeh N, Esmaeili H, Akhlaghi M, Vaseghnia H.	J Family Med Prim Care	10.4103/jfmpc.jfmpc_300_20	2020
Metabolism	Amphoteric surfactant N-oleoyl-N-methyltaurine utilized by Pseudomonas alcaligenes with excretion of N-methyltaurine.	Denger K, Mayer J, Hollemeyer K, Cook AM.	FEMS Microbiol Lett	10.1111/j.1574-6968.2008.01341.x	2008
Enzymology	Degradation of dexamethasone by acclimated strain of Pseudomonas Alcaligenes.	Zhu L, Yang Z, Yang Q, Tu Z, Ma L, Shi Z, Li X.	Int J Clin Exp Med		2015
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Metabolism	Identification of a Specific Maleate Hydratase in the Direct Hydrolysis Route of the Gentisate Pathway.	Liu K, Xu Y, Zhou NY.	Appl Environ Microbiol	10.1128/aem.00975-15	2015
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Pathogenicity	Characterization of a Conjugative Multidrug Resistance IncP-2 Megaplasmid, pPAG5, from a Clinical Pseudomonas aeruginosa Isolate.	Li M, Guan C, Song G, Gao X, Yang W, Wang T, Zhang Y.	Microbiol Spectr	10.1128/spectrum.01992-21	2022
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Genetics	Emergence and Genetic Characterization of Plasmid-Encoded VIM-2-Producing Pseudomonas stutzeri with Novel Integron In1998 Isolated from Cerebrospinal Fluid.	Liu S, Xu H, Guo X, Li S, Wang Q, Li Y, Liu R, Gou J.	Infect Drug Resist	10.2147/idr.s320294	2021
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Enzymology	Microbial lipases: advances in production, purification, biochemical characterization, and multifaceted applications in industry and medicine.	Abdelaziz AA, Abo-Kamar AM, Elkotb ES, Al-Madboly LA.	Microb Cell Fact	10.1186/s12934-025-02664-6	2025
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Metabolism	Dynamics of bacterial populations during bench-scale bioremediation of oily seawater and desert soil bioaugmented with coastal microbial mats.	Ali N, Dashti N, Salamah S, Sorkhoh N, Al-Awadhi H, Radwan S.	Microb Biotechnol	10.1111/1751-7915.12326	2016
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	Antifungal Potential of Azotobacter salinestris Strain Azt 31 against Phytopathogenic Fusarium spp. Associated with Cereals.	Nagaraja H, Chennappa G, Deepa N, Naik MK, Ajithkumar K, Amaresh YS, Achar PN, Sreenivasa MY.	J Fungi (Basel)	10.3390/jof8050473	2022
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Genetics	Characterization of the Putative Acylated Cellulose Synthase Operon in Komagataeibacter xylinus E25.	Szymczak I, Pietrzyk-Brzezinska AJ, Duszynski K, Ryngajllo M.	Int J Mol Sci	10.3390/ijms23147851	2022
Pathogenicity	Antibiograms of pathogenic bacteria isolated from laboratory rabbits in Ibadan, Nigeria.	Okewole EA, Olubunmi PA.	Lab Anim	10.1258/la.2007.007059	2008
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Pathogenicity	First Description of Various Bacteria Resistant to Heavy Metals and Antibiotics Isolated from Polluted Sites in Tunisia.	Miloud SB, Dziri O, Ferjani S, Ali MM, Mysara M, Boutiba I, Houdt RV, Chouchani C.	Pol J Microbiol	10.33073/pjm-2021-012	2021
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Enzymology	Intra-abdominal infections due to Comamonas kerstersii.	Almuzara MN, Cittadini R, Vera Ocampo C, Bakai R, Traglia G, Ramirez MS, del Castillo M, Vay CA.	J Clin Microbiol	10.1128/jcm.00659-13	2013
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Metabolism	Isolation and identification of atrazine-degrading bacteria from corn field soil in Fars province of Iran.	Dehghani M, Nasseri S, Amin S, Naddafee K, Taghavi M, Yunesian M, Maleky N.	Pak J Biol Sci	10.3923/pjbs.2007.84.89	2007
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Enzymology	Microbiological quality of indoor and outdoor swimming pools in Greece: investigation of the antibiotic resistance of the bacterial isolates.	Papadopoulou C, Economou V, Sakkas H, Gousia P, Giannakopoulos X, Dontorou C, Filioussis G, Gessouli H, Karanis P, Leveidiotou S.	Int J Hyg Environ Health	10.1016/j.ijheh.2007.06.007	2008
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	Microbial biodiversity and in situ bioremediation of endosulfan contaminated soil.	Kumar M, Lakshmi CV, Khanna S.	Indian J Microbiol	10.1007/s12088-008-0012-7	2008
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Metabolism	Selective bacterial colonization processes on polyethylene waste samples in an abandoned landfill site.	Puglisi E, Romaniello F, Galletti S, Boccaleri E, Frache A, Cocconcelli PS.	Sci Rep	10.1038/s41598-019-50740-w	2019
	Diversity and antimicrobial potential of the culturable rhizobacteria from medicinal plant Baccharis trimera Less D.C.	Jardim ACM, de Oliveira JE, Alves LM, Gutuzzo GO, de Oliveira ALM, Rodrigues EP.	Braz J Microbiol	10.1007/s42770-022-00759-5	2022
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Metabolism	Anopheles gambiae (Diptera: Culicidae) oviposition in response to agarose media and cultured bacterial volatiles.	Huang J, Miller JR, Chen SC, Vulule JM, Walker ED.	J Med Entomol	10.1603/0022-2585(2006)43[498:agdcoi]2.0.co;2	2006
Enzymology	A Hyperthermoactive-Cas9 Editing Tool Reveals the Role of a Unique Arsenite Methyltransferase in the Arsenic Resistance System of Thermus thermophilus HB27.	Gallo G, Mougiakos I, Bianco M, Carbonaro M, Carpentieri A, Illiano A, Pucci P, Bartolucci S, van der Oost J, Fiorentino G.	mBio	10.1128/mbio.02813-21	2021
Metabolism	Evaluation of pyrrolidonyl arylamidase for the identification of nonfermenting Gram-negative rods.	Bombicino KA, Almuzara MN, Famiglietti AM, Vay C.	Diagn Microbiol Infect Dis	10.1016/j.diagmicrobio.2006.02.012	2007
	Quality and Safety of Marinating Breast Muscles of Hens from Organic Farming after the Laying Period with Buttermilk and Whey.	Augustynska-Prejsnar A, Sokolowicz Z, Hanus P, Ormian M, Kacaniova M.	Animals (Basel)	10.3390/ani10122393	2020
Pathogenicity	A novel synthetic peptide derivative from lactoferrin exhibiting antimicrobial activity.	Ramesh CV, Kamini NR, Puvanakrishnan R.	Biotechnol Appl Biochem	10.1042/ba20040008	2004
Enzymology	Characterization of an extracellular medium-chain-length poly(3-hydroxyalkanoate) depolymerase from Pseudomonas alcaligenes LB19.	Kim DY, Nam JS, Rhee YH.	Biomacromolecules	10.1021/bm010113q	2002
	Isolation and characterization of group II introns from Pseudomonas alcaligenes and Pseudomonas putida.	Yeo CC, Yiin S, Tan BH, Poh CL.	Plasmid	10.1006/plas.2001.1518	2001
	Stenotrophomonas maltophilia endogenous endophthalmitis: clinical presentation, antibiotic susceptibility, and outcomes.	Chhablani J, Sudhalkar A, Jindal A, Das T, Motukupally SR, Sharma S, Pathengay A, Flynn HW.	Clin Ophthalmol	10.2147/opth.s67396	2014
	Simulation of thermal sanitization of air with heat recovery as applied to airborne pathogen deactivation.	Busto M, Tarifa EE, Cristaldi M, Badano JM, Vera CR.	Int J Environ Sci Technol (Tehran)	10.1007/s13762-022-03948-9	2022
Enzymology	Characterization of the promoter and upstream activating sequence from the Pseudomonas alcaligenes lipase gene.	Cox M, Gerritse G, Dankmeyer L, Quax WJ.	J Biotechnol	10.1016/s0168-1656(00)00397-7	2001
	The synthesis of soluble and volatile bioactive compounds by selected brewer's yeasts: Antagonistic effect against enteropathogenic bacteria and food spoiler - toxigenic Aspergillus sp.	Sampaolesi S, Briand LE, De Antoni G, Leon Pelaez A.	Food Chem X	10.1016/j.fochx.2021.100193	2022
Metabolism	Guanidination of soluble lysine-rich cyanophycin yields a homoarginine-containing polyamide.	Frommeyer M, Bergander K, Steinbuchel A.	Appl Environ Microbiol	10.1128/aem.04013-13	2014
	Lipid recovery from a vegetable oil emulsion using microbial enrichment cultures.	Tamis J, Sorokin DY, Jiang Y, van Loosdrecht MC, Kleerebezem R.	Biotechnol Biofuels	10.1186/s13068-015-0228-9	2015
	Redirection of acyl donor metabolic flux for lipopeptide A40926B0 biosynthesis.	Xia TY, Chen XA, Liu YQ, Scharf DH, Zhao QW, Li YQ.	Microb Biotechnol	10.1111/1751-7915.14021	2022
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Metabolism	Tn5563, a transposon encoding putative mercuric ion transport proteins located on plasmid pRA2 of Pseudomonas alcaligenes.	Yeo CC, Tham JM, Kwong SM, Yiin S, Poh CL.	FEMS Microbiol Lett	10.1111/j.1574-6968.1998.tb13154.x	1998
Metabolism	The phenotype enhancement method identifies the Xcp outer membrane secretion machinery from Pseudomonas alcaligenes as a bottleneck for lipase production.	Gerritse G, Ure R, Bizoullier F, Quax WJ.	J Biotechnol	10.1016/s0168-1656(98)00101-1	1998
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	Detoxification of Deoxynivalenol by a Mixed Culture of Soil Bacteria With 3-epi-Deoxynivalenol as the Main Intermediate.	Zhai Y, Zhong L, Gao H, Lu Z, Bie X, Zhao H, Zhang C, Lu F.	Front Microbiol	10.3389/fmicb.2019.02172	2019
Phylogeny	Duplex real-time PCR assay for the simultaneous detection of Achromobacter xylosoxidans and Achromobacter spp.	Price EP, Soler Arango V, Kidd TJ, Fraser TA, Nguyen TK, Bell SC, Sarovich DS.	Microb Genom	10.1099/mgen.0.000406	2020
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	Hydrogen Sulfide Protects Against Ammonia-Induced Neurotoxicity Through Activation of Nrf2/ARE Signaling in Astrocytic Model of Hepatic Encephalopathy.	Jin X, Chen D, Wu F, Zhang L, Huang Y, Lin Z, Wang X, Wang R, Xu L, Chen Y.	Front Cell Neurosci	10.3389/fncel.2020.573422	2020
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Enzymology	Identification of a marine Bacillus strain C5 and parathion-methyl degradation characteristics of the extracellular esterase B1.	Hao J, Liu J, Sun M.	Biomed Res Int	10.1155/2014/863094	2014
Metabolism	Arsenic methylation by a novel ArsM As(III) S-adenosylmethionine methyltransferase that requires only two conserved cysteine residues.	Huang K, Xu Y, Packianathan C, Gao F, Chen C, Zhang J, Shen Q, Rosen BP, Zhao FJ.	Mol Microbiol	10.1111/mmi.13882	2018
Phylogeny	New Insights Into Culturable and Unculturable Bacteria Across the Life History of Medicinal Maggots Lucilia sericata (Meigen) (Diptera: Calliphoridae).	Maleki-Ravasan N, Ahmadi N, Soroushzadeh Z, Raz AA, Zakeri S, Dinparast Djadid N.	Front Microbiol	10.3389/fmicb.2020.00505	2020
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Metabolism	Electrophoretic analysis of cyanide depletion by Pseudomonas alcaligenes.	Zaugg SE, Davidson RA, Walker JC, Walker EB.	Electrophoresis	10.1002/elps.1150180205	1997
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Enzymology	How quantitative is quantitative PCR with respect to cell counts?	Ludwig W, Schleifer KH.	Syst Appl Microbiol	10.1016/s0723-2020(00)80030-2	2000
Metabolism	Replacement of tyrosine 181 by phenylalanine in gentisate 1,2-dioxygenase I from Pseudomonas alcaligenes NCIMB 9867 enhances catalytic activities.	Tan CL, Yeo CC, Khoo HE, Poh CL.	J Bacteriol	10.1128/jb.187.21.7543-7545.2005	2005
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Genetics	Exploring the genome of Arctic Psychrobacter sp. DAB_AL32B and construction of novel Psychrobacter-specific cloning vectors of an increased carrying capacity.	Ciok A, Dziewit L.	Arch Microbiol	10.1007/s00203-018-1595-y	2019
Enzymology	Recurrent Microvirgula aerodenitrificans bacteremia.	Murphy ME, Goodson A, Malnick H, Shah J, Neelamkavil R, Devi R.	J Clin Microbiol	10.1128/jcm.00392-12	2012
Phylogeny	Comparison of Metagenomics and Metatranscriptomics Tools: A Guide to Making the Right Choice.	Terron-Camero LC, Gordillo-Gonzalez F, Salas-Espejo E, Andres-Leon E.	Genes (Basel)	10.3390/genes13122280	2022
Genetics	Metagenomic Insights Into the Changes of Antibiotic Resistance and Pathogenicity Factor Pools Upon Thermophilic Composting of Human Excreta.	Werner KA, Schneider D, Poehlein A, Diederich N, Feyen L, Axtmann K, Hubner T, Bruggemann N, Prost K, Daniel R, Grohmann E.	Front Microbiol	10.3389/fmicb.2022.826071	2022
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Metabolism	The C-terminal domain of the Pseudomonas secretin XcpQ forms oligomeric rings with pore activity.	Brok R, Van Gelder P, Winterhalter M, Ziese U, Koster AJ, de Cock H, Koster M, Tommassen J, Bitter W.	J Mol Biol	10.1006/jmbi.1999.3340	1999
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Enzymology	Preliminary crystallographic analysis of salicylate 1,2-dioxygenase from Pseudaminobacter salicylatoxidans.	Matera I, Ferraroni M, Burger S, Stolz A, Briganti F.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106016435	2006
Metabolism	Investigation into PCB biodegradation using uniformly 14C-labelled dichlorobiphenyl.	Kubatova A, Matucha M, Erbanova P, Novotny C, Vlasakova V, Sasek V.	Isotopes Environ Health Stud	10.1080/10256019808234069	1998
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Metabolism	Quorum-sensing cross talk: isolation and chemical characterization of cyclic dipeptides from Pseudomonas aeruginosa and other gram-negative bacteria.	Holden MT, Ram Chhabra S, de Nys R, Stead P, Bainton NJ, Hill PJ, Manefield M, Kumar N, Labatte M, England D, Rice S, Givskov M, Salmond GP, Stewart GS, Bycroft BW, Kjelleberg S, Williams P.	Mol Microbiol	10.1046/j.1365-2958.1999.01577.x	1999
Metabolism	Comprehensive genomic analysis of an indigenous Pseudomonas pseudoalcaligenes degrading phenolic compounds.	Safari M, Yakhchali B, Shariati J V.	Sci Rep	10.1038/s41598-019-49048-6	2019
Metabolism	Arsenic Methylation in Arabidopsis thaliana Expressing an Algal Arsenite Methyltransferase Gene Increases Arsenic Phytotoxicity.	Tang Z, Lv Y, Chen F, Zhang W, Rosen BP, Zhao FJ.	J Agric Food Chem	10.1021/acs.jafc.6b00462	2016
Phylogeny	Characterization of bacterial communities in wastewater with enhanced taxonomic resolution by full-length 16S rRNA sequencing.	Numberger D, Ganzert L, Zoccarato L, Muhldorfer K, Sauer S, Grossart HP, Greenwood AD.	Sci Rep	10.1038/s41598-019-46015-z	2019
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Metabolism	Degradation of aliphatic halogen-substituted pesticides by dehalogenase isolated from Pseudomonas alcaligenes. Identification and properties of the enzyme.	Busto MD, Smith PP, Perez-Mateos M, Burns RG.	Sci Total Environ	10.1016/0048-9697(92)90152-i	1992
Enzymology	Detection of Pseudomonas aeruginosa from ovine fleece washings by PCR amplification of 16S ribosomal RNA.	Kingsford NM, Raadsma HW.	Vet Microbiol	10.1016/0378-1135(95)00061-e	1995
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Metabolism	Biological denitrification of brine: the effect of compatible solutes on enzyme activities and fatty acid degradation.	Cyplik P, Piotrowska-Cyplik A, Marecik R, Czarny J, Drozdzynska A, Chrzanowski L.	Biodegradation	10.1007/s10532-012-9542-0	2012
Enzymology	Evaluation of a novel thermo-alkaline Staphylococcus aureus lipase for application in detergent formulations.	Ben Bacha A, Ben Bacha A, Al-Assaf A, Moubayed NMS, Abid I.	Saudi J Biol Sci	10.1016/j.sjbs.2016.10.006	2018
Metabolism	Synergistic biodegradation of aromatic-aliphatic copolyester plastic by a marine microbial consortium.	Meyer-Cifuentes IE, Werner J, Jehmlich N, Will SE, Neumann-Schaal M, Ozturk B.	Nat Commun	10.1038/s41467-020-19583-2	2020
	Isolation and Screening of Bacteria for Their Diazotrophic Potential and Their Influence on Growth Promotion of Maize Seedlings in Greenhouses.	Kifle MH, Laing MD.	Front Plant Sci	10.3389/fpls.2015.01225	2015
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Metabolism	Molecular and biochemical characterization of the xlnD-encoded 3-hydroxybenzoate 6-hydroxylase involved in the degradation of 2,5-xylenol via the gentisate pathway in Pseudomonas alcaligenes NCIMB 9867.	Gao X, Tan CL, Yeo CC, Poh CL.	J Bacteriol	10.1128/jb.187.22.7696-7702.2005	2005
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Phylogeny	Pneumonia due to Bordetella bronchiseptica in a cystic fibrosis patient: 16S rRNA sequencing for diagnosis confirmation.	Wallet F, Perez T, Armand S, Wallaert B, Courcol RJ.	J Clin Microbiol	10.1128/jcm.40.6.2300-2301.2002	2002
	Rhamnolipids Increase the Phytotoxicity of Diesel Oil Towards Four Common Plant Species in a Terrestrial Environment.	Marecik R, Wojtera-Kwiczor J, Lawniczak L, Cyplik P, Szulc A, Szulc A, Piotrowska-Cyplik A, Chrzanowski L.	Water Air Soil Pollut	10.1007/s11270-012-1190-9	2012
Enzymology	Regulation of isofunctional enzymes in Pseudomonas alcaligenes mutants defective in the gentisate pathway.	Poh CL, Bayly RC.	J Appl Bacteriol	10.1111/j.1365-2672.1988.tb05102.x	1988
Metabolism	Engineering of a chromogenic enzyme screening system based on an auxiliary indole-3-carboxylic acid monooxygenase.	Casaite V, Sadauskas M, Vaitekunas J, Gasparaviciute R, Meskiene R, Skikaite I, Sakalauskas M, Jakubovska J, Tauraite D, Meskys R.	Microbiologyopen	10.1002/mbo3.795	2019
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Enzymology	A novel eukaryote-made thermostable DNA polymerase which is free from bacterial DNA contamination.	Niimi H, Mori M, Tabata H, Minami H, Ueno T, Hayashi S, Kitajima I.	J Clin Microbiol	10.1128/jcm.00584-11	2011
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	In vivo effect of the organophosphorus insecticide trichlorphon on immune response of carp (Cyprinus carpio). II. Effect of high doses of trichlorphon on nonspecific immune response.	Siwicki AK, Cossarini-Dunier M, Studnicka M, Demael A.	Ecotoxicol Environ Saf	10.1016/0147-6513(90)90084-i	1990
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	Serratia odorifera a midgut inhabitant of Aedes aegypti mosquito enhances its susceptibility to dengue-2 virus.	Apte-Deshpande A, Paingankar M, Gokhale MD, Deobagkar DN.	PLoS One	10.1371/journal.pone.0040401	2012
Pathogenicity	Cefetamet pivoxil: bacteriostatic and bactericidal activity of the free acid against 355 gram-negative rods.	Hohl P, von Graevenitz A, Zollinger-Iten J.	Infection	10.1007/bf01644102	1988
Metabolism	Sodium lauryl ether sulfate (SLES) degradation by nitrate-reducing bacteria.	Paulo AMS, Aydin R, Dimitrov MR, Vreeling H, Cavaleiro AJ, Garcia-Encina PA, Stams AJM, Plugge CM.	Appl Microbiol Biotechnol	10.1007/s00253-017-8212-x	2017
Pathogenicity	Terpene Derivatives as a Potential Agent against Antimicrobial Resistance (AMR) Pathogens.	Mahizan NA, Yang SK, Moo CL, Song AA, Chong CM, Chong CW, Abushelaibi A, Lim SE, Lai KS.	Molecules	10.3390/molecules24142631	2019
Enzymology	Raw cow milk bacterial population shifts attributable to refrigeration.	Lafarge V, Ogier JC, Girard V, Maladen V, Leveau JY, Gruss A, Delacroix-Buchet A.	Appl Environ Microbiol	10.1128/aem.70.9.5644-5650.2004	2004
Enzymology	Rapid identification of gram-negative bacteria with and without CTX-M extended-spectrum beta-lactamase from positive blood culture bottles by PCR followed by microchip gel electrophoresis.	Fujita S, Yosizaki K, Ogushi T, Uechi K, Takemori Y, Senda Y.	J Clin Microbiol	10.1128/jcm.01976-10	2011
Phylogeny	Case of catheter sepsis with Ralstonia gilardii in a child with acute lymphoblastic leukemia.	Wauters G, Claeys G, Verschraegen G, De Baere T, Vandecruys E, Van Simaey L, De Ganck C, Vaneechoutte M.	J Clin Microbiol	10.1128/jcm.39.12.4583-4584.2001	2001
Enzymology	First comprehensively documented case of Paracoccus yeei infection in a human.	Funke G, Frodl R, Sommer H.	J Clin Microbiol	10.1128/jcm.42.7.3366-3368.2004	2004
Phylogeny	Performances of VITEK 2 colorimetric cards for identification of gram-positive and gram-negative bacteria.	Wallet F, Loiez C, Renaux E, Lemaitre N, Courcol RJ.	J Clin Microbiol	10.1128/jcm.43.9.4402-4406.2005	2005
Pathogenicity	EuroCareCF quality assessment of diagnostic microbiology of cystic fibrosis isolates.	Hogardt M, Ulrich J, Riehn-Kopp H, Tummler B.	J Clin Microbiol	10.1128/jcm.01182-09	2009
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Pathogenicity	The activity of ceftazidime compared with those of aztreonam, newer cephalosporins and Sch 29482 against nonfermentative gram-negative bacilli.	Schell RF, Francisco M, Bihl JA, LeFrock JL.	Chemotherapy	10.1159/000238334	1985
Metabolism	G1549, a new cyclic hydroxamic acid antibiotic, isolated from culture broth of Pseudomonas alcaligenes.	Barker WR, Callaghan C, Hill L, Noble D, Acred P, Harper PB, Sowa MA, Fletton RA.	J Antibiot (Tokyo)	10.7164/antibiotics.32.1096	1979
Metabolism	Characterization of a novel subgroup of extracellular medium-chain-length polyhydroxyalkanoate depolymerases from actinobacteria.	Gangoiti J, Santos M, Prieto MA, de la Mata I, Serra JL, Llama MJ.	Appl Environ Microbiol	10.1128/aem.01707-12	2012
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	Economic optimized medium for tensio-active agent production by Candida sphaerica UCP0995 and application in the removal of hydrophobic contaminant from sand.	Luna JM, Rufino RD, Albuquerque CD, Sarubbo LA, Campos-Takaki GM.	Int J Mol Sci	10.3390/ijms12042463	2011
Enzymology	Persistent Wolbachia and cultivable bacteria infection in the reproductive and somatic tissues of the mosquito vector Aedes albopictus.	Zouache K, Voronin D, Tran-Van V, Mousson L, Failloux AB, Mavingui P.	PLoS One	10.1371/journal.pone.0006388	2009
Phylogeny	Systematic classification of the His-Me finger superfamily.	Jablonska J, Matelska D, Steczkiewicz K, Ginalski K.	Nucleic Acids Res	10.1093/nar/gkx924	2017
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Metabolism	Identification of Pseudomonas alcaligenes chromosomal DNA in the plasmid DNA of the chlorobenzene-degrading recombinant Pseudomonas putida strain CB1-9.	Carney BF, Krockel L, Leary JV, Focht DD.	Appl Environ Microbiol	10.1128/aem.55.4.1037-1039.1989	1989
Metabolism	Exchange of Xcp (Gsp) secretion machineries between Pseudomonas aeruginosa and Pseudomonas alcaligenes: species specificity unrelated to substrate recognition.	de Groot A, Koster M, Gerard-Vincent M, Gerritse G, Lazdunski A, Tommassen J, Filloux A.	J Bacteriol	10.1128/jb.183.3.959-967.2001	2001
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Metabolism	Species-specific functioning of the Pseudomonas XcpQ secretin: role for the C-terminal homology domain and lipopolysaccharide.	Bitter W, van Boxtel R, Groeneweg M, Carballo PS, Zahringer U, Tommassen J, Koster M.	J Bacteriol	10.1128/jb.01583-06	2007
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Metabolism	Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI.	Shen BW, Heiter DF, Chan SH, Wang H, Xu SY, Morgan RD, Wilson GG, Stoddard BL.	Structure	10.1016/j.str.2010.03.009	2010
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Enzymology	Capillary electrophoresis-single-strand conformation polymorphism analysis for rapid identification of Pseudomonas aeruginosa and other gram-negative nonfermenting bacilli recovered from patients with cystic fibrosis.	Ghozzi R, Morand P, Ferroni A, Beretti JL, Bingen E, Segonds C, Husson MO, Izard D, Berche P, Gaillard JL.	J Clin Microbiol	10.1128/jcm.37.10.3374-3379.1999	1999
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Metabolism	Functional analysis of unique class II insertion sequence IS1071.	Sota M, Yano H, Nagata Y, Ohtsubo Y, Genka H, Anbutsu H, Kawasaki H, Tsuda M.	Appl Environ Microbiol	10.1128/aem.72.1.291-297.2006	2006
Metabolism	The two-component GacS-GacA system activates lipA translation by RsmE but not RsmA in Pseudomonas protegens Pf-5.	Zha D, Xu L, Zhang H, Yan Y.	Appl Environ Microbiol	10.1128/aem.02184-14	2014
	Variability in subpopulation formation propagates into biocatalytic variability of engineered Pseudomonas putida strains.	Lindmeyer M, Jahn M, Vorpahl C, Muller S, Schmid A, Buhler B.	Front Microbiol	10.3389/fmicb.2015.01042	2015
	A survey of deepwater horizon (DWH) oil-degrading bacteria from the Eastern oyster biome and its surrounding environment.	Thomas JC, Wafula D, Chauhan A, Green SJ, Gragg R, Jagoe C.	Front Microbiol	10.3389/fmicb.2014.00149	2014
Phylogeny	Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities.	Lamendella R, Strutt S, Borglin S, Chakraborty R, Tas N, Mason OU, Hultman J, Prestat E, Hazen TC, Jansson JK.	Front Microbiol	10.3389/fmicb.2014.00130	2014
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Metabolism	Growth kinetics of Pseudomonas alcaligenes C-0 relative to inoculation and 3-chlorobenzoate metabolism in soil.	Focht DD, Shelton D.	Appl Environ Microbiol	10.1128/aem.53.8.1846-1849.1987	1987
Cultivation	Growth of non-Campylobacter, oxidase-positive bacteria on selective Campylobacter agar.	Moskowitz LB, Chester B.	J Clin Microbiol	10.1128/jcm.15.6.1144-1147.1982	1982
	Bioaugmentation with Petroleum-Degrading Consortia Has a Selective Growth-Promoting Impact on Crop Plants Germinated in Diesel Oil-Contaminated Soil.	Graj W, Lisiecki P, Szulc A, Chrzanowski L, Wojtera-Kwiczor J.	Water Air Soil Pollut	10.1007/s11270-013-1676-0	2013
	Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons.	Cambray G, Sanchez-Alberola N, Campoy S, Guerin E, Da Re S, Gonzalez-Zorn B, Ploy MC, Barbe J, Mazel D, Erill I.	Mob DNA	10.1186/1759-8753-2-6	2011
Enzymology	Sanitization of an automatic reverse-osmosis watering system: removal of a clinically significant biofilm.	Molk DM, Karr-May CL, Trang ED, Sanders GE.	J Am Assoc Lab Anim Sci		2013
Metabolism	Differential radial capillary action of ligand assay for high-throughput detection of protein-metabolite interactions.	Roelofs KG, Wang J, Sintim HO, Lee VT.	Proc Natl Acad Sci U S A	10.1073/pnas.1018949108	2011
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Metabolism	New insights into the assembly of bacterial secretins: structural studies of the periplasmic domain of XcpQ from Pseudomonas aeruginosa.	Van der Meeren R, Wen Y, Van Gelder P, Tommassen J, Devreese B, Savvides SN.	J Biol Chem	10.1074/jbc.m112.432096	2013
	Coronavirus (SARS-CoV-2) in the environment: Occurrence, persistence, analysis in aquatic systems and possible management.	Patel M, Chaubey AK, Pittman CU, Mlsna T, Mohan D.	Sci Total Environ	10.1016/j.scitotenv.2020.142698	2021
	'Cyclical Bias' in Microbiome Research Revealed by A Portable Germ-Free Housing System Using Nested Isolation.	Rodriguez-Palacios A, Aladyshkina N, Ezeji JC, Erkkila HL, Conger M, Ward J, Webster J, Cominelli F.	Sci Rep	10.1038/s41598-018-20742-1	2018
Phylogeny	The Response of a 16S Ribosomal RNA Gene Fragment Amplified Community to Lead, Zinc, and Copper Pollution in a Shanghai Field Trial.	Kou S, Vincent G, Gonzalez E, Pitre FE, Labrecque M, Brereton NJB.	Front Microbiol	10.3389/fmicb.2018.00366	2018
Enzymology	Phenotypic and enzymatic comparative analysis of the novel KPC variant KPC-5 and its evolutionary variants, KPC-2 and KPC-4.	Wolter DJ, Kurpiel PM, Woodford N, Palepou MF, Goering RV, Hanson ND.	Antimicrob Agents Chemother	10.1128/aac.00734-08	2009
	Erythromycin resistance-conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like element, and a large region of unknown function.	Schluter A, Szczepanowski R, Kurz N, Schneiker S, Krahn I, Puhler A.	Appl Environ Microbiol	10.1128/aem.02159-06	2007
	Putative prophages related to lytic tailless marine dsDNA phage PM2 are widespread in the genomes of aquatic bacteria.	Krupovic M, Bamford DH.	BMC Genomics	10.1186/1471-2164-8-236	2007
	Response of bacterioplankton to iron fertilization of the Southern Ocean, Antarctica.	Singh SK, Kotakonda A, Kapardar RK, Kankipati HK, Sreenivasa Rao P, Sankaranarayanan PM, Vetaikorumagan SR, Gundlapally SR, Nagappa R, Shivaji S.	Front Microbiol	10.3389/fmicb.2015.00863	2015
Enzymology	Identification of bacteria in drinking and purified water during the monitoring of a typical water purification system.	Penna VT, Martins SA, Mazzola PG.	BMC Public Health	10.1186/1471-2458-2-13	2002
	Evidence for the role of horizontal transfer in generating pVT1, a large mosaic conjugative plasmid from the clam pathogen, Vibrio tapetis.	Erauso G, Lakhal F, Bidault-Toffin A, Le Chevalier P, Bouloc P, Paillard C, Jacq A.	PLoS One	10.1371/journal.pone.0016759	2011
	Chronic Infection by Mucoid Pseudomonas aeruginosa Associated with Dysregulation in T-Cell Immunity to Outer Membrane Porin F.	Quigley KJ, Reynolds CJ, Goudet A, Raynsford EJ, Sergeant R, Quigley A, Worgall S, Bilton D, Wilson R, Loebinger MR, Maillere B, Altmann DM, Boyton RJ.	Am J Respir Crit Care Med	10.1164/rccm.201411-1995oc	2015
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Metabolism	Genomic and functional analyses of the gentisate and protocatechuate ring-cleavage pathways and related 3-hydroxybenzoate and 4-hydroxybenzoate peripheral pathways in Burkholderia xenovorans LB400.	Romero-Silva MJ, Mendez V, Agullo L, Seeger M.	PLoS One	10.1371/journal.pone.0056038	2013
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Enzymology	Identification and biochemical evidence of a medium-chain-length polyhydroxyalkanoate depolymerase in the Bdellovibrio bacteriovorus predatory hydrolytic arsenal.	Martinez V, Martinez V, de la Pena F, Garcia-Hidalgo J, de la Mata I, Garcia JL, Prieto MA.	Appl Environ Microbiol	10.1128/aem.01099-12	2012
Metabolism	Thymidine salvage in Pseudomonas stutzeri and Pseudomonas aeruginosa provided by heterologous expression of Escherichia coli thymidine kinase gene.	Carlson CA, Stewart GJ, Ingraham JL.	J Bacteriol	10.1128/jb.163.1.291-295.1985	1985
	pA506, a conjugative plasmid of the plant epiphyte Pseudomonas fluorescens A506.	Stockwell VO, Davis EW, Carey A, Shaffer BT, Mavrodi DV, Hassan KA, Hockett K, Thomashow LS, Paulsen IT, Loper JE.	Appl Environ Microbiol	10.1128/aem.01354-13	2013
Metabolism	Remarkable ability of Pandoraea pnomenusa B356 biphenyl dioxygenase to metabolize simple flavonoids.	Pham TT, Tu Y, Sylvestre M.	Appl Environ Microbiol	10.1128/aem.00225-12	2012
	Plant Growth-Promoting Rhizobacteria Inoculation to Enhance Vegetative Growth, Nitrogen Fixation and Nitrogen Remobilisation of Maize under Greenhouse Conditions.	Kuan KB, Othman R, Abdul Rahim K, Shamsuddin ZH.	PLoS One	10.1371/journal.pone.0152478	2016
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Metabolism	pH-dependent uptake of fumaric acid in Saccharomyces cerevisiae under anaerobic conditions.	Jamalzadeh E, Verheijen PJ, Heijnen JJ, van Gulik WM.	Appl Environ Microbiol	10.1128/aem.05591-11	2012
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Enzymology	Purification and some properties of maleylpyruvate hydrolase and fumarylpyruvate hydrolase from Pseudomonas alcaligenes.	Bayly RC, Chapman PJ, Dagley S, Di Berardino D.	J Bacteriol	10.1128/jb.143.1.70-77.1980	1980
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Metabolism	Phosphate starvation triggers production and secretion of an extracellular lipoprotein in Caulobacter crescentus.	Le Blastier S, Hamels A, Cabeen M, Schille L, Tilquin F, Dieu M, Raes M, Matroule JY.	PLoS One	10.1371/journal.pone.0014198	2010
Pathogenicity	Effect of pH and temperature on denitrification gene expression and activity in Pseudomonas mandelii.	Saleh-Lakha S, Shannon KE, Henderson SL, Goyer C, Trevors JT, Zebarth BJ, Burton DL.	Appl Environ Microbiol	10.1128/aem.00080-09	2009
Metabolism	Properties of a Pseudomonas stutzeri outer membrane channel-forming protein (NosA) required for production of copper-containing N2O reductase.	Lee HS, Hancock RE, Ingraham JL.	J Bacteriol	10.1128/jb.171.4.2096-2100.1989	1989
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Genetics	Integrons in Xanthomonas: a source of species genome diversity.	Gillings MR, Holley MP, Stokes HW, Holmes AJ.	Proc Natl Acad Sci U S A	10.1073/pnas.0406620102	2005
Metabolism	Evidence for isofunctional enzymes used in m-cresol and 2,5-xylenol degradation via the gentisate pathway in Pseudomonas alcaligenes.	Poh CL, Bayly RC.	J Bacteriol	10.1128/jb.143.1.59-69.1980	1980
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Enzymology	Evaluation of the VITEK 2 system for rapid identification of medically relevant gram-negative rods.	Funke G, Monnet D, deBernardis C, von Graevenitz A, Freney J.	J Clin Microbiol	10.1128/jcm.36.7.1948-1952.1998	1998
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Metabolism	Type II protein secretion is a subset of the PilD-dependent processes that facilitate intracellular infection by Legionella pneumophila.	Rossier O, Cianciotto NP.	Infect Immun	10.1128/iai.69.4.2092-2098.2001	2001
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Metabolism	Direct ring fission of salicylate by a salicylate 1,2-dioxygenase activity from Pseudaminobacter salicylatoxidans.	Hintner JP, Lechner C, Riegert U, Kuhm AE, Storm T, Reemtsma T, Stolz A.	J Bacteriol	10.1128/jb.183.23.6936-6942.2001	2001
Metabolism	Functional identification of novel genes involved in the glutathione-independent gentisate pathway in Corynebacterium glutamicum.	Shen XH, Jiang CY, Huang Y, Liu ZP, Liu SJ.	Appl Environ Microbiol	10.1128/aem.71.7.3442-3452.2005	2005
Enzymology	Studies of lipid A fractions from the lipopolysaccharides of Pseudomonas aeruginosa and Pseudomonas alcaligenes.	Drewry DT, Lomax JA, Gray GW, Wilkinson SG.	Biochem J	10.1042/bj1330563	1973
Stress	A group II intron-type open reading frame from the thermophile Bacillus (Geobacillus) stearothermophilus encodes a heat-stable reverse transcriptase.	Vellore J, Moretz SE, Lampson BC.	Appl Environ Microbiol	10.1128/aem.70.12.7140-7147.2004	2004
Metabolism	Self-generated DNA termini relax the specificity of SgrAI restriction endonuclease.	Bitinaite J, Schildkraut I.	Proc Natl Acad Sci U S A	10.1073/pnas.022346799	2002
Metabolism	Type II protein secretion in Pseudomonas aeruginosa: the pseudopilus is a multifibrillar and adhesive structure.	Durand E, Bernadac A, Ball G, Lazdunski A, Sturgis JN, Filloux A.	J Bacteriol	10.1128/jb.185.9.2749-2758.2003	2003
Pathogenicity	The effect of ethylenediaminetetra-acetate on Pseudomonas alcaligenes and the composition of the bacterial cell wall.	Key BA, Gray GW, Wilkinson SG.	Biochem J	10.1042/bj1170721	1970
	The purification and chemical composition of the lipopolysaccharide of Pseudomonas alcaligenes.	Key BA, Gray GW, Wilkinson SG.	Biochem J	10.1042/bj1200559	1970
Metabolism	Molecular evidence for the evolution of metal homeostasis genes by lateral gene transfer in bacteria from the deep terrestrial subsurface.	Coombs JM, Barkay T.	Appl Environ Microbiol	10.1128/aem.70.3.1698-1707.2004	2004
	Integron diversity in heavy-metal-contaminated mine tailings and inferences about integron evolution.	Nemergut DR, Martin AP, Schmidt SK.	Appl Environ Microbiol	10.1128/aem.70.2.1160-1168.2004	2004
Pathogenicity	Presence of a group II intron in a multiresistant Serratia marcescens strain that harbors three integrons and a novel gene fusion.	Centron D, Roy PH.	Antimicrob Agents Chemother	10.1128/aac.46.5.1402-1409.2002	2002
Pathogenicity	Factors influencing the occurrence of high numbers of iodine-resistant bacteria in iodinated swimming pools.	Favero MS, Drake CH.	Appl Microbiol	10.1128/am.14.4.627-635.1966	1966
	Genomic sequence and transcriptional analysis of a 23-kilobase mycobacterial linear plasmid: evidence for horizontal transfer and identification of plasmid maintenance systems.	Le Dantec C, Winter N, Gicquel B, Vincent V, Picardeau M.	J Bacteriol	10.1128/jb.183.7.2157-2164.2001	2001
Genetics	The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons.	Rowe-Magnus DA, Guerout AM, Ploncard P, Dychinco B, Davies J, Mazel D.	Proc Natl Acad Sci U S A	10.1073/pnas.98.2.652	2001
	Highly different levels of natural transformation are associated with genomic subgroups within a local population of Pseudomonas stutzeri from soil.	Sikorski J, Teschner N, Wackernagel W.	Appl Environ Microbiol	10.1128/aem.68.2.865-873.2002	2002
Metabolism	Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate.	Zhong Z, Toukdarian A, Helinski D, Knauf V, Sykes S, Wilkinson JE, O'Bryne C, Shea T, DeLoughery C, Caspi R.	Appl Environ Microbiol	10.1128/aem.67.12.5771-5779.2001	2001
	Fingerprinting of prokaryotic 16S rRNA genes using oligodeoxyribonucleotide microarrays and virtual hybridization.	Reyes-Lopez MA, Mendez-Tenorio A, Maldonado-Rodriguez R, Doktycz MJ, Fleming JT, Beattie KL.	Nucleic Acids Res	10.1093/nar/gkg132	2003
Metabolism	Plasmid-dependent methylotrophy in thermotolerant Bacillus methanolicus.	Brautaset T, Jakobsen M OM, Flickinger MC, Valla S, Ellingsen TE.	J Bacteriol	10.1128/jb.186.5.1229-1238.2004	2004
Metabolism	Structure-function analysis of XcpP, a component involved in general secretory pathway-dependent protein secretion in Pseudomonas aeruginosa.	Bleves S, Gerard-Vincent M, Lazdunski A, Filloux A.	J Bacteriol	10.1128/jb.181.13.4012-4019.1999	1999
Metabolism	Alteration of the lipopolysaccharide structure affects the functioning of the Xcp secretory system in Pseudomonas aeruginosa.	Michel G, Ball G, Goldberg JB, Lazdunski A.	J Bacteriol	10.1128/jb.182.3.696-703.2000	2000
Metabolism	Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707.	Klotz MG, Arp DJ, Chain PS, El-Sheikh AF, Hauser LJ, Hommes NG, Larimer FW, Malfatti SA, Norton JM, Poret-Peterson AT, Vergez LM, Ward BB.	Appl Environ Microbiol	10.1128/aem.00463-06	2006
Pathogenicity	Inhibition of Aflatoxin Production in Aspergillus flavus by a Klebsiella sp. and Its Metabolite Cyclo(l-Ala-Gly).	Sakuda S, Sunaoka M, Terada M, Sakoda A, Ishijima N, Hakoshima N, Uchida K, Enomoto H, Furukawa T.	Toxins (Basel)	10.3390/toxins16030141	2024
	Internal and external microbiota of home-caught Anopheles coluzzii (Diptera: Culicidae) from Côte d'Ivoire, Africa: Mosquitoes are filthy.	Chen K, Ponnusamy L, Mouhamadou CS, Fodjo BK, Sadia GC, Affoue FPK, Deguenon JM, Roe RM.	PLoS One	10.1371/journal.pone.0278912	2022
	Characterization of Two Novel Endolysins from Bacteriophage PEF1 and Evaluation of Their Combined Effects on the Control of Enterococcus faecalis Planktonic and Biofilm Cells.	Wang C, Zhao J, Lin Y, Lwin SZC, El-Telbany M, Masuda Y, Honjoh KI, Miyamoto T.	Antibiotics (Basel)	10.3390/antibiotics13090884	2024
Genetics	Genome Sequences of 72 Bacterial Strains Isolated from Ectocarpus subulatus: A Resource for Algal Microbiology.	Karimi E, Geslain E, KleinJan H, Tanguy G, Legeay E, Corre E, Dittami SM.	Genome Biol Evol	10.1093/gbe/evz278	2020
Genetics	Metagenomic Profiling of Microbial Pathogens in the Little Bighorn River, Montana.	Hamner S, Brown BL, Hasan NA, Franklin MJ, Doyle J, Eggers MJ, Colwell RR, Ford TE.	Int J Environ Res Public Health	10.3390/ijerph16071097	2019
	Bacillus subtilis TR47II as a source of bioactive lipopeptides against Gram-negative pathogens causing nosocomial infections.	de Souza Freitas F, Coelho de Assis Lage T, Ayupe BAL, de Paula Siqueira T, de Barros M, Totola MR	3 Biotech	10.1007/s13205-020-02459-z	2020
Genetics	Whole genome sequences of a free-living Pseudomonas sp. strain ML96 isolated from a freshwater Maar Lake.	Li X, Blom J, Zeng Y	Mar Genomics	10.1016/j.margen.2015.05.016	2015
Metabolism	Arsenic methylation and volatilization by arsenite S-adenosylmethionine methyltransferase in Pseudomonas alcaligenes NBRC14159.	Zhang J, Cao T, Tang Z, Shen Q, Rosen BP, Zhao FJ	Appl Environ Microbiol	10.1128/AEM.03804-14	2015
Metabolism	Effect of carbon source on pyrimidine biosynthesis in Pseudomonas alcaligenes ATCC 14909.	Santiago MF, West TP	Microbiol Res	10.1078/0944-5013-00172	2003
Metabolism	Comparison of aspartate transcarbamoylase regulation in Pseudomonas alcaligenes and Pseudomonas mendocina.	Santiago MF, West TP	J Basic Microbiol	10.1002/jobm.200390008	2003
Metabolism	Pyrimidine base and ribonucleoside utilization by the Pseudomonas alcaligenes group.	West TP	Antonie Van Leeuwenhoek	10.1007/BF00583679	1991
Genetics	Pseudomonas subflava sp. nov., a new Gram-negative bacterium isolated from Guishan in Yunnan province, south-west China.	Ling C, Zhao JY, Li LL, Ding ZG, Zhang MY, Tang J, Liang SG, Li JY, Liu XD, Feng LY, Yang PW, Lu Y, Shi ZF, Kong CS, Li MG, Tang SK.	Antonie Van Leeuwenhoek	10.1007/s10482-023-01826-z	2023
	Pseudomonas paralcaligenes sp. nov., isolated from a hospitalized patient.	Ono E, Tohya M, Watanabe S, Tada T, Kuwahara-Arai K, Oshiba A, Izumi N, Kirikae T.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005649	2023
Phylogeny	Pseudomonas campi sp. nov., a nitrate-reducing bacterium isolated from grassland soil.	Timsy, Spanner T, Ulrich A, Kublik S, Foesel BU, Kolb S, Horn MA, Behrendt U.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004799	2021
Phylogeny	Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyema.	Yuen KY, Woo PC, Teng JL, Leung KW, Wong MK, Lau SK.	J Clin Microbiol	10.1128/jcm.39.12.4227-4232.2001	2001
Phylogeny	Amantichitinum ursilacus gen. nov., sp. nov., a chitin-degrading bacterium isolated from soil.	Moss KS, Hartmann SC, Muller I, Fritz C, Krugener S, Zibek S, Hirth T, Rupp S.	Int J Syst Evol Microbiol	10.1099/ijs.0.034447-0	2013
Phylogeny	Pseudomonas tohonis sp. nov., isolated from the skin of a patient with burn wounds in Japan.	Yamada K, Sasaki M, Aoki K, Nagasawa T, Murakami H, Ishii M, Shibuya K, Morita T, Ishii Y, Tateda K	Int J Syst Evol Microbiol	10.1099/ijsem.0.005115	2021
Phylogeny	Pseudomonas fluvialis sp. nov., a novel member of the genus Pseudomonas isolated from the river Ganges, India.	Sudan SK, Pal D, Bisht B, Kumar N, Chaudhry V, Patil P, Sahni G, Mayilraj S, Krishnamurthi S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002520	2017
Phylogeny	Pseudomonas guguanensis sp. nov., a gammaproteobacterium isolated from a hot spring.	Liu YC, Young LS, Lin SY, Hameed A, Hsu YH, Lai WA, Shen FT, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.047712-0	2013

References

#12715	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50342
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40285	; Curators of the CIP;
#44372	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 1425 A
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116206	Collection of Institut Pasteur ; Curators of the CIP; CIP 101034
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas alcaligenes (DSM 50342, ATCC 14909, NCTC 10367)

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