Peribacillus butanolivorans (DSM 18926, LMG 23974, K9)

Name: Peribacillus butanolivorans (DSM 18926, LMG 23974, K9)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1271

Type strain

Strain Designation K9

Culture col. no. DSM 18926 LMG 23974 K9

NCBI tax ID(s) 421767

Special Collections DSMZ Literature strains

History DSMZ <- N. Kuisiene; strain K9

Links

Peribacillus butanolivorans K9 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

spore-forming Gram-positive motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 293498

LMG 23974,DSM 18926

@ref 20215

Last LPSN update 2026-05-29 08:25:13

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Peribacillus

Species Peribacillus butanolivorans

Full scientific name Peribacillus butanolivorans (Kuisiene et al. 2008) Patel and Gupta 2020

Synonyms (1)

Bacillus butanolivorans

BacDive ID	Other strains from **Peribacillus butanolivorans** (3)	Type strain
131648	P. butanolivorans Leaf13, DSM 102576
131651	P. butanolivorans Soil768D1, DSM 102773
163656	P. butanolivorans JCM 28850

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
32333	positive	3.75 µm	1.05 µm	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7780	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7780	positive	growth	30
32333	positive	growth	05-45
32333	positive	optimum	25

Culture pH

@ref	Ability	Type	PH	PH range
32333	positive	optimum	7
32333	positive	growth	6-8.8	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
32333	aerobe
125439	facultative anaerobe	95.301

Spore formation

@ref	Spore formation	Confidence
32333
125438		94.143

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32333	NaCl	positive	growth	0.5-5 %
32333	NaCl	positive	optimum	1 %

Observation

32333

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32333	17268 ChEBI	myo-inositol	+	carbon source
32333	17632 ChEBI	nitrate	+	reduction
32333	16634 ChEBI	raffinose	+	carbon source
32333	26546 ChEBI	rhamnose	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7780	soil	Lithuania	LTU	Europe

Taxonmaps

69479

Global distribution of 16S sequence EF206294 (>99% sequence identity) for Peribacillus from Microbeatlas

Aquatic Samples	1051
Soil Samples	6241
Animal Samples	2464
Plant Samples	880
Total Samples	10636

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7780	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM127375v1 assembly for Peribacillus butanolivorans DSM 18926	scaffold	GCA_001273755	421767.3	2645727660	421767	60.85

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7780	Bacillus butanolivorans strain K9 16S ribosomal RNA gene, partial sequence	EF206294	1471		421767
124043	Peribacillus butanolivorans strain DSM 18926 16S ribosomal RNA gene, partial sequence.	OR841473	1412		421767

GC content

7780

GC-content (mol%)37.4

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM127375v1 assembly for Peribacillus butanolivorans DSM 18926
NCBI: GCA_001273755

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	95.30	no
125439	gram_stain	BacteriaNetⓘ	variable	64.01	no
125439	motility	BacteriaNetⓘ	yes	60.89	no
125439	spore_formation	BacteriaNetⓘ	yes	84.68	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Peribacillus butanolivorans DSM 18926
NCBI: GCA_001273755.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	75.90	no
125438	anaerobic	anaerobicⓘ	no	93.31	no
125438	aerobic	aerobicⓘ	yes	78.39	yes
125438	spore-forming	spore-formingⓘ	yes	94.14	yes
125438	thermophilic	thermophileⓘ	no	95.20	yes
125438	flagellated	motile2+ⓘ	yes	83.71	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Brevibacterium frigoritolerans DSM 8801(T) as Bacillus frigoritolerans comb. nov. Based on Genome Analysis.	Liu GH, Liu B, Wang JP, Che JM, Li PF	Curr Microbiol	10.1007/s00284-020-01964-x	2020
Genetics	Genome Sequence of Bacillus butanolivorans K9T (DSM 18926), an n-Butanol-Consuming Bacterium Isolated from Soil.	Wang JP, Liu B, Liu GH, Chen DJ, Xiao RF, Zheng XF, Shi H, Ge CB	Genome Announc	10.1128/genomeA.01228-15	2015
Phylogeny	Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow.	Jiang L, Jung WY, Li Z, Lee MK, Park SH, Kang SW, Lee JS, Jung H, Hur TY, Kim HB, Kim JK, Lee JH, Lee JH, Lee J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004721	2021
Phylogeny	Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum.	Kampfer P, Busse HJ, McInroy JA, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000555	2015
Phylogeny	Bacillus butanolivorans sp. nov., a species with industrial application for the remediation of n-butanol.	Kuisiene N, Raugalas J, Sproer C, Kroppenstedt RM, Chitavichius D	Int J Syst Evol Microbiol	10.1099/ijs.0.65332-0	2008

References

#7780	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18926
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28567	IJSEM 505 2008 ( DOI 10.1099/ijs.0.65332-0 , PubMed 18218958 )
#32333	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28567
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Peribacillus butanolivorans (DSM 18926, LMG 23974, K9)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001273755

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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