Pseudoalteromonas tetraodonis GFC is an obligate aerobe, psychrophilic, Gram-negative animal pathogen that was isolated from skin slime of pufferfish .
Gram-negative motile rod-shaped obligate aerobe psychrophilic animal pathogen genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Alteromonadales |
| Family Pseudoalteromonadaceae |
| Genus Pseudoalteromonas |
| Species Pseudoalteromonas tetraodonis |
| Full scientific name Pseudoalteromonas tetraodonis (Simidu et al. 1990) Ivanova et al. 2001 |
| Synonyms (2) |
| @ref | Production | Name | |
|---|---|---|---|
| 123491 | Pyocyanin |
| @ref: | 3499 |
| multimedia content: | DSM_9166.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_9166.jpg |
| caption: | Micrograph of DSM 9166. Scale bar represents 2 um. |
| intellectual property rights: | Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3499 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water | ||
| 42032 | MEDIUM 192 - for Alteromonas rubra | Distilled water make up to (250.000 ml);Agar (15.000 g);Yeast extract (3.000 g);Peptone (5.000 g);Synthetic sea solution - M0216 (750.000 ml) | |||
| 123491 | CIP Medium 192 | Medium recipe at CIP | |||
| 123491 | CIP Medium 13 | Medium recipe at CIP |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 123491 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 123491 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 123491 | amylase | + | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123491 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 123491 | caseinase | + | 3.4.21.50 | |
| 123491 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 123491 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 123491 | gelatinase | + | ||
| 123491 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 123491 | lipase | + | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 123491 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 123491 | ornithine decarboxylase | - | 4.1.1.17 | |
| 123491 | oxidase | + | ||
| 123491 | protease | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 123491 | tryptophan deaminase | - | ||
| 123491 | tween esterase | - | ||
| 123491 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
Global distribution of 16S sequence X82139 (>99% sequence identity) for Pseudoalteromonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM231083v1 assembly for Pseudoalteromonas tetraodonis GFC | complete | 43659 | 99.4 | ||||
| 124043 | ASM3015981v1 assembly for Pseudoalteromonas tetraodonis GFC NBRC 103034 | contig | 1315271 | 74.1 | ||||
| 66792 | ASM799123v1 assembly for Pseudoalteromonas tetraodonis GFC NBRC 103034 | contig | 1315271 | 65.84 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Pseudoalteromonas tetraodonis strain IAM 14160 16S ribosomal RNA gene, partial sequence | AF214730 | 1464 | 43659 | ||
| 20218 | A.tetraodonis 16S rRNA gene (IAM 14160T) | X82139 | 1428 | 43659 | ||
| 20218 | Pseudoalteromonas tetraodonis strain KMM 458 16S ribosomal RNA gene, partial sequence | AF214729 | 1491 | 43659 | ||
| 20218 | Pseudoalteromonas tetraodonis gene for 16S rRNA, partial sequence, strain: NBRC 103034 | AB681914 | 1459 | 43659 | ||
| 124043 | Pseudoalteromonas tetraodonis GFC strain KMM 458 16S ribosomal RNA gene, partial sequence. | OP740546 | 1143 | 1315271 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 41 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 97.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 65.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 97.90 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.91 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 75.85 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 88.98 | no |
| 125438 | thermophilic | thermophileⓘ | no | 100.00 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 88.69 | no |
| Title | Authors | Journal | DOI | Year | |
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| Isolation and Identification of Cadmium-Reducing Bacteria from Contaminated Coastal Sediment in the Northern Coast of Indramayu, Indonesia. | Kusumaningrum Pribadi TD, Pasaribu B, Fellatami K, Mingguo J, Ismail A, Febriani C, Fui CF, Nurul Ihsan Y. | Pak J Biol Sci | 10.3923/pjbs.2025.102.110 | 2025 | |
| Directed assembly of biofilm communities for marine biofouling prevention. | Amador CI, Fatima N, Jakobsen ASS, Macario L, Pichon P, Aldred N, Burmolle M. | Appl Environ Microbiol | 10.1128/aem.01392-25 | 2025 | |
| Diversity and biosynthetic potential of culturable microbes associated with toxic marine animals. | Chau R, Kalaitzis JA, Wood SA, Neilan BA. | Mar Drugs | 10.3390/md11082695 | 2013 | |
| Diversity of free-living and attached bacteria in offshore Western Mediterranean waters as depicted by analysis of genes encoding 16S rRNA. | Acinas SG, Anton J, Rodriguez-Valera F. | Appl Environ Microbiol | 10.1128/aem.65.2.514-522.1999 | 1999 | |
| Effect of bacterial dissociation on lipopolysaccharide structure: A study of O-polysaccharide from the marine bacterium Pseudoalteromonas agarivorans KMM 232 (O-form). | Kokoulin MS, Belova VS, Romanenko LA. | Carbohydr Res | 10.1016/j.carres.2024.109300 | 2024 | |
| Partial structure and immunological properties of lipopolysaccharide from marine-derived Pseudomonas stutzeri KMM 226. | Kokoulin MS, Sokolova EV, Elkin YN, Romanenko LA, Mikhailov VV, Komandrova NA. | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0907-6 | 2017 | |
| Secondary Metabolites of the Marine Sponge-Derived Fungus Aspergillus subramanianii 1901NT-1.40.2 and Their Antimicrobial and Anticancer Activities. | Khmel OO, Yurchenko AN, Trinh PTH, Ngoc NTD, Trang VTD, Khanh HHN, Antonov AS, Drozdov KA, Popov RS, Kim NY, Berdyshev DV, Chingizova EA, Menchinskaya ES, Yurchenko EA. | Mar Drugs | 10.3390/md23090353 | 2025 | |
| Structure of polysaccharide moiety of Pseudomonas xanthomarina KMM 1447T lipopolysaccharide. | Kokoulin MS, Tomshich SV, Kalinovsky AI, Romanenko LA, Komandrova NA. | Carbohydr Res | 10.1016/j.carres.2016.07.020 | 2016 | |
| Stonikacidin A, an Antimicrobial 4-Bromopyrrole Alkaloid Containing L-Idonic Acid Core from the Northwestern Pacific Marine Sponge Lissodendoryx papillosa. | Tabakmakher KM, Makarieva TN, Sabutski YE, Kokoulin MS, Menshov AS, Popov RS, Guzii AG, Shubina LK, Chingizova EA, Chingizov AR, Yurchenko EA, Fedorov SN, Grebnev BB, von Amsberg G, Dyshlovoy SA, Ivanchina NV, Dmitrenok PS. | Mar Drugs | 10.3390/md22090396 | 2024 | |
| Metabolite profiles of Paragliomastix luzulae (formerly named as Acremonium striatisporum) KMM 4401 and its co-cultures with Penicillium hispanicum KMM 4689. | Starnovskaya SS, Nesterenko LE, Popov RS, Kirichuk NN, Chausova VE, Chingizova EA, Chingizov AR, Isaeva MP, Yurchenko EA, Yurchenko AN. | Nat Prod Bioprospect | 10.1007/s13659-024-00459-7 | 2024 | |
| The O-specific polysaccharide from the marine bacterium Pseudoalteromonas agarivorans KMM 255(T). | Komandrova NA, Kokoulin MS, Kalinovskiy AI, Tomshich SV, Romanenko LA, Vaskovsky VE. | Carbohydr Res | 10.1016/j.carres.2015.07.008 | 2015 | |
| Monitoring of oil pollution at Gemsa Bay and bioremediation capacity of bacterial isolates with biosurfactants and nanoparticles. | El-Sheshtawy HS, Khalil NM, Ahmed W, Ahmed W, Abdallah RI. | Mar Pollut Bull | 10.1016/j.marpolbul.2014.07.059 | 2014 | |
| New l-Rhamnose-Binding Lectin from the Bivalve Glycymeris yessoensis: Purification, Partial Structural Characterization and Antibacterial Activity. | Mizgina TO, Chikalovets IV, Bulanova TA, Molchanova VI, Filshtein AP, Ziganshin RH, Rogozhin EA, Shilova NV, Chernikov OV. | Mar Drugs | 10.3390/md22010027 | 2023 | |
| Phanogracilins A-C, New Bibenzochromenones of Crinoid Phanogenia gracilis (Hartlaub, 1890). | Vasileva EA, Berdyshev DV, Mishchenko NP, Gerasimenko AV, Menchinskaya ES, Pislyagin EA, Chingizova EA, Kaluzhskiy LA, Dautov SS, Fedoreyev SA. | Biomolecules | 10.3390/biom14020151 | 2024 | |
| Bioactive Polyketides from the Natural Complex of the Sea Urchin-Associated Fungi Penicillium sajarovii KMM 4718 and Aspergillus protuberus KMM 4747. | Leshchenko EV, Berdyshev DV, Yurchenko EA, Antonov AS, Borkunov GV, Kirichuk NN, Chausova VE, Kalinovskiy AI, Popov RS, Khudyakova YV, Chingizova EA, Chingizov AR, Isaeva MP, Yurchenko AN. | Int J Mol Sci | 10.3390/ijms242316568 | 2023 | |
| Structure of an acidic O-specific polysaccharide of the marine bacterium Pseudoalteromonas agarivorans KMM 232 (R-form). | Komandrova NA, Isakov VV, Tomshich SV, Romanenko LA, Perepelov AV, Shashkov AS. | Biochemistry (Mosc) | 10.1134/s0006297910050123 | 2010 | |
| New piperazine derivatives helvamides B-C from the marine-derived fungus Penicillium velutinum ZK-14 uncovered by OSMAC (One Strain Many Compounds) strategy. | Borkunov GV, Leshchenko EV, Berdyshev DV, Popov RS, Chingizova EA, Shlyk NP, Gerasimenko AV, Kirichuk NN, Khudyakova YV, Chausova VE, Antonov AS, Kalinovsky AI, Chingizov AR, Yurchenko EA, Isaeva MP, Yurchenko AN. | Nat Prod Bioprospect | 10.1007/s13659-024-00449-9 | 2024 | |
| [Enrichment and diversity analyis of arsenite-resistant bacteria in deep sea sediment samples from southwest Indian Ocean ridge]. | Chen S, Shao Z. | Wei Sheng Wu Xue Bao | 2008 | ||
| New Zosteropenillines and Pallidopenillines from the Seagrass-Derived Fungus Penicillium yezoense KMM 4679. | Leshchenko EV, Chingizova EA, Antonov AS, Shlyk NP, Borkunov GV, Berdyshev DV, Chausova VE, Kirichuk NN, Khudyakova YV, Chingizov AR, Kalinovsky AI, Popov RS, Kim NY, Chadova KA, Yurchenko EA, Isaeva MP, Yurchenko AN. | Mar Drugs | 10.3390/md22070317 | 2024 | |
| New Cyclopiane Diterpenes and Polyketide Derivatives from Marine Sediment-Derived Fungus Penicillium antarcticum KMM 4670 and Their Biological Activities. | Yurchenko AN, Zhuravleva OI, Khmel OO, Oleynikova GK, Antonov AS, Kirichuk NN, Chausova VE, Kalinovsky AI, Berdyshev DV, Kim NY, Popov RS, Chingizova EA, Chingizov AR, Isaeva MP, Yurchenko EA. | Mar Drugs | 10.3390/md21110584 | 2023 | |
| [Characteristics of adhesion of epiphytic bacteria on leaves of the seagrass Zostera marina and on abiotic surfaces]. | Kurilenko VV, Ivanova EP, Mikhailov VV. | Mikrobiologiia | 2007 | ||
| [Inhibition of prokaryote and eukaryote cells adhesion by sea proteobacteria Pseudoalteromonas nigrifaciens KMM 156 lipopolysaccharide and its fragments]. | Smolina TP, Gorshkova RP, Nazarenko EL, Besednova NN. | Antibiot Khimioter | 2005 | ||
| Magnificamide, a beta-Defensin-Like Peptide from the Mucus of the Sea Anemone Heteractis magnifica, Is a Strong Inhibitor of Mammalian alpha-Amylases. | Sintsova O, Gladkikh I, Kalinovskii A, Zelepuga E, Monastyrnaya M, Kim N, Shevchenko L, Peigneur S, Tytgat J, Kozlovskaya E, Leychenko E. | Mar Drugs | 10.3390/md17100542 | 2019 | |
| Structure of O-specific polysaccharide from Pseudoalteromonas nigrifaciens strain KMM 161. | Gorshkova RP, Nazarenko EL, Zubkov VA, Ivanova EP, Gorshkova NM, Isakov VV. | Biochemistry (Mosc) | 10.1023/a:1016150405908 | 2002 | |
| Tolerance to cadmium of free-living and associated with marine animals and eelgrass marine gamma-proteobacteria. | Ivanova EP, Kurilenko VV, Kurilenko AV, Gorshkova NM, Shubin FN, Nicolau DV, Chelomin VP. | Curr Microbiol | 10.1007/s00284-001-0017-5 | 2002 | |
| Diversity of Cultivable Protease-Producing Bacteria in Laizhou Bay Sediments, Bohai Sea, China. | Li Y, Wu C, Zhou M, Wang ET, Zhang Z, Liu W, Ning J, Xie Z. | Front Microbiol | 10.3389/fmicb.2017.00405 | 2017 | |
| Structure of sulfated O-specific polysaccharide of the marine bacterium Pseudoalteromonas marinoglutinosa KMM 232. | Komandrova NA, Tomshich SV, Isakov VV, Romanenko LA. | Biochemistry (Mosc) | 1998 | ||
| Assignment of Alteromonas elyakovii KMM 162T and five strains isolated from spot-wounded fronds of Laminaria japonica to Pseudoalteromonas elyakovii comb. nov. and the extended description of the species. | Sawabe T, Tanaka R, Iqbal MM, Tajima K, Ezura Y, Ivanova EP, Christen R. | Int J Syst Evol Microbiol | 10.1099/00207713-50-1-265 | 2000 | |
| [Structure of the repeating link of the acid polysaccharide of Alteromonas haloplanktis KMM 156]. | Gorshkova RP, Nazarenko EL, Zubkov VA, Ivanova EP, Ovodov IuS, Shashkov AS, Knirel' IuA. | Bioorg Khim | 1993 | ||
| Synthesis and Evaluation of Antimicrobial and Cytotoxic Activity of Oxathiine-Fused Quinone-Thioglucoside Conjugates of Substituted 1,4-Naphthoquinones. | Sabutski YE, Menchinskaya ES, Shevchenko LS, Chingizova EA, Chingizov AR, Popov RS, Denisenko VA, Mikhailov VV, Aminin DL, Polonik SG. | Molecules | 10.3390/molecules25163577 | 2020 | |
| Comparative analysis of glycoside hydrolases activities from phylogenetically diverse marine bacteria of the genus Arenibacter. | Bakunina I, Nedashkovskaya O, Balabanova L, Zvyagintseva T, Rasskasov V, Mikhailov V. | Mar Drugs | 10.3390/md11061977 | 2013 | |
| Development of innovative pediocin PA-1 by DNA shuffling among class IIa bacteriocins. | Tominaga T, Hatakeyama Y. | Appl Environ Microbiol | 10.1128/aem.00558-07 | 2007 | |
| Structure of a colitose-containing O-specific polysaccharide of the marine bacterium Pseudoalteromonas tetraodonis IAM 14160(T). | Muldoon J, Perepelov AV, Shashkov AS, Gorshkova RP, Nazarenko EL, Zubkov VA, Ivanova EP, Knirel YA, Savage AV | Carbohydr Res | 10.1016/s0008-6215(01)00121-5 | 2001 | |
| Retrieval of the species Alteromonas tetraodonis Simidu et al. 1990 as Pseudoalteromonas tetraodonis comb. nov. and emendation of description. | Ivanova EP, Romanenko LA, Matte MH, Matte GR, Lysenko AM, Simidu U, Kita-Tsukamoto K, Sawabe T, Vysotskii MV, Frolova GM, Mikhailov V, Christen R, Colwell RR | Int J Syst Evol Microbiol | 10.1099/00207713-51-3-1071 | 2001 | |
| Pseudomonas kunmingensis sp. nov., an exopolysaccharide-producing bacterium isolated from a phosphate mine. | Xie F, Ma H, Quan S, Liu D, Chen G, Chao Y, Qian S. | Int J Syst Evol Microbiol | 10.1099/ijs.0.055632-0 | 2014 |
| #3499 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9166 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #42032 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123491 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104758 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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