Tessaracoccus oleiagri (DSM 22955, CGMCC 1.9159, SL014B-20A1)

Name: Tessaracoccus oleiagri (DSM 22955, CGMCC 1.9159, SL014B-20A1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12668

Type strain

Strain Designation SL014B-20A1

Culture col. no. DSM 22955 CGMCC 1.9159 SL014B-20A1

NCBI tax ID(s) 686624

Special Collections DSMZ Literature strains

History <- Y.-Q. Tang, Peking Univ., Beijing, China; SL014B-20A1 <- H. Cai et al.

Links

Tessaracoccus oleiagri SL014B-20A1 is a facultative anaerobe, Gram-positive, rod-shaped bacterium that forms circular colonies and was isolated from crude oil-polluted saline soil.

Gram-positive rod-shaped colony-forming facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 364090

LMG 25428,LMG 25487,CGMCC 1.9159,DSM 22955

@ref 20215

Last LPSN update 2026-02-09 11:20:54

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Propionibacteriaceae

Genus Tessaracoccus

Species Tessaracoccus oleiagri

Full scientific name Tessaracoccus oleiagri Cai et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
23333	positive	0.5-1.0 µm	0.48 µm	rod-shaped
125438					91.6
125438	positive				90.151
125439	positive				98.2

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
23333	bright yellow	circular	7 days	ASW

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16633	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
23333	ASW

Culture temp

@ref	Growth	Type	Temperature (°C)
16633	positive	growth	30
23333	positive	growth	4-50
23333	positive	optimum	28

Culture pH

@ref	Ability	Type	PH	PH range
23333	positive	optimum	7.0
23333	positive	growth	6.0-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
23333	facultative anaerobe
125439	obligate aerobe	93.8

Spore formation

23333

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
23333	NaCl	positive	optimum	4 %
23333	NaCl	positive	growth	0-11 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23333	17128 ChEBI	adipate	-	assimilation
23333	16449 ChEBI	alanine	-	nitrogen source
23333	36219 ChEBI	alpha-lactose	+	carbon source
23333	29016 ChEBI	arginine	-	nitrogen source
23333	16150 ChEBI	benzoate	+	carbon source
23333	62968 ChEBI	cellulose	-	hydrolysis
23333	16947 ChEBI	citrate	+	carbon source
23333	17108 ChEBI	D-arabinose	-	assimilation
23333	18333 ChEBI	D-arabitol	-
23333	15824 ChEBI	D-fructose	+	carbon source
23333	12936 ChEBI	D-galactose	-
23333	12936 ChEBI	D-galactose	+	carbon source
23333	17634 ChEBI	D-glucose	+	carbon source
23333	16899 ChEBI	D-mannitol	-
23333	16899 ChEBI	D-mannitol	+	carbon source
23333	16024 ChEBI	D-mannose	-	assimilation
23333	16024 ChEBI	D-mannose	+
23333	16988 ChEBI	D-ribose	+	carbon source
23333	17924 ChEBI	D-sorbitol	-
23333	65327 ChEBI	D-xylose	-
23333	27689 ChEBI	decanoate	-	assimilation
23333	4853 ChEBI	esculin	+	degradation
23333	15740 ChEBI	formate	+	carbon source
23333	16813 ChEBI	galactitol	+	carbon source
23333	15428 ChEBI	glycine	-	nitrogen source
23333	27570 ChEBI	histidine	-	nitrogen source
23333	15443 ChEBI	inulin	+	carbon source
23333	30849 ChEBI	L-arabinose	-	carbon source
23333	30849 ChEBI	L-arabinose	+	builds acid from
23333	29991 ChEBI	L-aspartate	-	nitrogen source
23333	17203 ChEBI	L-proline	-	nitrogen source
23333	17716 ChEBI	lactose	-
23333	25115 ChEBI	malate	-	assimilation
23333	17306 ChEBI	maltose	-	assimilation
23333	28053 ChEBI	melibiose	-
23333	320061 ChEBI	methyl alpha-D-glucopyranoside	-
23333	17268 ChEBI	myo-inositol	+	carbon source
23333	506227 ChEBI	N-acetylglucosamine	-	assimilation
23333	17632 ChEBI	nitrate	+	reduction
23333	18401 ChEBI	phenylacetate	-	assimilation
23333	28044 ChEBI	phenylalanine	-	nitrogen source
23333	16634 ChEBI	raffinose	-
23333	16634 ChEBI	raffinose	+	carbon source
23333	26546 ChEBI	rhamnose	+	carbon source
23333	15963 ChEBI	ribitol	-
23333	17814 ChEBI	salicin	+	carbon source
23333	30911 ChEBI	sorbitol	+	carbon source
23333	30031 ChEBI	succinate	+	carbon source
23333	27082 ChEBI	trehalose	+	carbon source
23333	27897 ChEBI	tryptophan	-	nitrogen source
23333	18222 ChEBI	xylose	+	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
23333	2676	amoxicillin	10 µg
23333	204928	cefotaxime	30 µg
23333	3508	ceftazidime	30 µg
23333	17698	chloramphenicol	30 µg
23333	100241	ciprofloxacin	5 µg
23333	48923	erythromycin	15 µg
23333	17833	gentamicin		10 µg
23333	6104	kanamycin	30 µg
23333	31845	midecamycin	15 µg
23333	7507	neomycin		30 µg
23333	28368	novobiocin	5 µg
23333	18208	penicillin g	10 Unit
23333	8309	polymyxin b		300 Unit
23333	28077	rifampicin	5 µg
23333	17076	streptomycin	300 µg
23333	9332	sulfamethoxazole	300 µg
23333	27902	tetracycline	30 µg
23333	28001	vancomycin	30 µg

Metabolite production

@ref	Chebi-ID	Metabolite	Production
23333	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
23333	alpha-fucosidase	-	3.2.1.51
23333	alpha-galactosidase	+	3.2.1.22
23333	alpha-glucosidase	+	3.2.1.20
23333	arginine dihydrolase	-	3.5.3.6
23333	beta-galactosidase	-	3.2.1.23
23333	beta-glucuronidase	+	3.2.1.31
23333	cystine arylamidase	+	3.4.11.3
23333	esterase (C 4)	+
23333	gelatinase	-
23333	leucine arylamidase	+	3.4.11.1
23333	lipase (C 14)	-
23333	naphthol-AS-BI-phosphohydrolase	+
23333	valine arylamidase	+

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	cardiolipin biosynthesis	100	7 of 7
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	vitamin K metabolism	100	5 of 5
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	CMP-KDO biosynthesis	100	4 of 4
66794	suberin monomers biosynthesis	100	2 of 2
66794	phenylmercury acetate degradation	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	starch degradation	100	10 of 10
66794	denitrification	100	2 of 2
66794	heme metabolism	92.86	13 of 14
66794	threonine metabolism	90	9 of 10
66794	valine metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	propanol degradation	85.71	6 of 7
66794	pyrimidine metabolism	84.44	38 of 45
66794	pentose phosphate pathway	81.82	9 of 11
66794	metabolism of disaccharids	81.82	9 of 11
66794	degradation of sugar alcohols	81.25	13 of 16
66794	peptidoglycan biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	propionate fermentation	80	8 of 10
66794	citric acid cycle	78.57	11 of 14
66794	photosynthesis	78.57	11 of 14
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	d-mannose degradation	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	purine metabolism	76.6	72 of 94
66794	ketogluconate metabolism	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	isoleucine metabolism	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	gluconeogenesis	75	6 of 8
66794	flavin biosynthesis	73.33	11 of 15
66794	NAD metabolism	72.22	13 of 18
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	glutamate and glutamine metabolism	71.43	20 of 28
66794	glycolysis	70.59	12 of 17
66794	Entner Doudoroff pathway	70	7 of 10
66794	degradation of sugar acids	68	17 of 25
66794	acetoin degradation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	octane oxidation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	histidine metabolism	65.52	19 of 29
66794	alanine metabolism	65.52	19 of 29
66794	tetrahydrofolate metabolism	64.29	9 of 14
66794	proline metabolism	63.64	7 of 11
66794	d-xylose degradation	63.64	7 of 11
66794	non-pathway related	63.16	24 of 38
66794	oxidative phosphorylation	62.64	57 of 91
66794	methionine metabolism	61.54	16 of 26
66794	leucine metabolism	61.54	8 of 13
66794	lipoate biosynthesis	60	3 of 5
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	myo-inositol biosynthesis	60	6 of 10
66794	lipid metabolism	58.06	18 of 31
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	tyrosine metabolism	57.14	8 of 14
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	glutathione metabolism	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	degradation of hexoses	55.56	10 of 18
66794	tryptophan metabolism	55.26	21 of 38
66794	glycine metabolism	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	lactate fermentation	50	2 of 4
66794	biotin biosynthesis	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	arginine metabolism	50	12 of 24
66794	adipate degradation	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	degradation of pentoses	46.43	13 of 28
66794	vitamin B1 metabolism	46.15	6 of 13
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	carotenoid biosynthesis	45.45	10 of 22
66794	vitamin B6 metabolism	45.45	5 of 11
66794	nitrate assimilation	44.44	4 of 9
66794	lipid A biosynthesis	44.44	4 of 9
66794	lysine metabolism	42.86	18 of 42
66794	cellulose degradation	40	2 of 5
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	O-antigen biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	carnitine metabolism	37.5	3 of 8
66794	sphingosine metabolism	33.33	2 of 6
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	chlorophyll metabolism	33.33	6 of 18
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	ascorbate metabolism	31.82	7 of 22
66794	androgen and estrogen metabolism	31.25	5 of 16
66794	urea cycle	30.77	4 of 13
66794	sulfate reduction	30.77	4 of 13
66794	coenzyme M biosynthesis	30	3 of 10
66794	arachidonic acid metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	polyamine pathway	26.09	6 of 23
66794	toluene degradation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	methanogenesis from CO2	25	3 of 12
66794	vitamin B12 metabolism	20.59	7 of 34

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Contamination	#Oil (Fuel)
#Engineered	#Industrial	#Oil reservoir
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16633	crude oil-polluted saline soil	oil-contaminated saline soil of Shengli Oilfield, China,	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence GU111566 (>99% sequence identity) for Tessaracoccus from Microbeatlas

Aquatic Samples	272
Soil Samples	286
Animal Samples	687
Plant Samples	62
Total Samples	1307

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16633	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2617270936 annotated assembly for Tessaracoccus oleiagri CGMCC 1.9159	contig	GCA_900103275	686624.3	2617270936	686624	74.27

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16633	Tessaracoccus oleiagri strain SL014B-20A1 16S ribosomal RNA gene, partial sequence	GU111566	1460		686624

GC content

@ref	GC-content (mol%)	Method
16633	67.17	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Tessaracoccus oleiagri CGMCC 1.9159
NCBI: GCA_900103275

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	82.10	no
125439	motility	BacteriaNetⓘ	no	67.40	no
125439	gram_stain	BacteriaNetⓘ	positive	98.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Tessaracoccus oleiagri strain CGMCC 1.9159
PATRIC: 686624.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.15	no
125438	anaerobic	anaerobicⓘ	no	92.26	no
125438	spore-forming	spore-formingⓘ	no	75.07	yes
125438	aerobic	aerobicⓘ	yes	62.22	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	91.60	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Tessaracoccus massiliensis sp. nov., a new bacterial species isolated from the human gut.	Seck E, Traore SI, Khelaifia S, Beye M, Michelle C, Couderc C, Brah S, Fournier PE, Raoult D, Dubourg G.	New Microbes New Infect	10.1016/j.nmni.2016.05.002	2016
Phylogeny	Tessaracoccus flavus sp. nov., isolated from the drainage system of a lindane-producing factory.	Kumari R, Singh P, Schumann P, Lal R	Int J Syst Evol Microbiol	10.1099/ijsem.0.000958	2016
Phylogeny	Tessaracoccus lapidicaptus sp. nov., an actinobacterium isolated from the deep subsurface of the Iberian pyrite belt.	Puente-Sanchez F, Sanchez-Roman M, Amils R, Parro V	Int J Syst Evol Microbiol	10.1099/ijs.0.060038-0	2014
Phylogeny	Salinarimonas ramus sp. nov. and Tessaracoccus oleiagri sp. nov., isolated from a crude oil-contaminated saline soil.	Cai M, Wang L, Cai H, Li Y, Wang YN, Tang YQ, Wu XL	Int J Syst Evol Microbiol	10.1099/ijs.0.025932-0	2010

References

#16633	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22955
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23333	Man Cai, Lu Wang, Hua Cai, Yan Li, Ya-Nan Wang, Yue-Qin Tang, Xiao-Lei Wu: Salinarimonas ramus sp. nov. and Tessaracoccus oleiagri sp. nov., isolated from a crude oil-contaminated saline soil. IJSEM 61: 1767 - 1775 2011 ( DOI 10.1099/ijs.0.025932-0 , PubMed 20802058 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Tessaracoccus oleiagri (DSM 22955, CGMCC 1.9159, SL014B-20A1)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900103275

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media