Propionibacterium freudenreichii E11.1 is an anaerobe, Gram-positive, rod-shaped bacterium of the family Propionibacteriaceae.
Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Propionibacteriales |
| Family Propionibacteriaceae |
| Genus Propionibacterium |
| Species Propionibacterium freudenreichii |
| Full scientific name Propionibacterium freudenreichii van Niel 1928 (Approved Lists 1980) |
| Synonyms (2) |
| BacDive ID | Other strains from Propionibacterium freudenreichii (7) | Type strain |
|---|---|---|
| 12642 | P. freudenreichii 53-W (Hitchner No. 33), 33, CCUG 7433, DSM ... (type strain) | |
| 12644 | P. freudenreichii DSM 20270 | |
| 138863 | P. freudenreichii 3, CIP 59.32, NCDO 1073, NCIMB 8896 | |
| 143387 | P. freudenreichii CCUG 18835, CCM 121, ATCC 4866, NCTC 5964 | |
| 151125 | P. freudenreichii CCUG 43326 | |
| 153244 | P. freudenreichii CCUG 48870, LMG 16419 | |
| 153245 | P. freudenreichii CCUG 48871, LMG 16423 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1869 | PYG MEDIUM (MODIFIED) (DSMZ Medium 104) | Medium recipe at MediaDive | Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water | ||
| 41657 | MEDIUM 20 - for Anaerobic bacteria | Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml) | |||
| 119456 | CIP Medium 20 | Medium recipe at CIP |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 1869 | A31 | A1gamma m-Dpm-direct |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 119456 | 17632 ChEBI | nitrate | - | reduction | |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 119456 | 16301 ChEBI | nitrite | - | reduction | |
| 68380 | 16634 ChEBI | raffinose | - | fermentation | from API rID32A |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| @ref | Chebi-ID | Metabolite | Indole test | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | - | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 119456 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | histidine arylamidase | + | from API rID32A | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucine arylamidase | + | 3.4.11.1 | from API rID32A |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 119456 | oxidase | - | ||
| 68380 | phenylalanine arylamidase | + | from API rID32A | |
| 68380 | proline-arylamidase | + | 3.4.11.5 | from API rID32A |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68380 | serine arylamidase | + | from API rID32A | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68380 | tyrosine arylamidase | + | from API rID32A | |
| 119456 | urease | - | 3.5.1.5 | |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 53417 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1869 | - | - | - | + | - | +/- | - | - | - | - | - | - | - | - | - | - | - | + | + | - | + | + | - | + | +/- | + | + | - | + | |
| 1869 | - | - | - | + | - | +/- | - | - | - | - | - | - | - | - | - | - | - | + | + | + | + | + | - | + | + | + | + | - | + | |
| 1869 | - | - | - | + | - | + | - | - | - | - | +/- | - | - | - | - | - | - | +/- | + | - | + | + | - | + | - | - | + | - | + | |
| 1869 | - | - | - | + | - | + | - | - | - | - | +/- | - | - | - | - | - | - | +/- | + | - | + | + | - | + | - | +/- | + | - | + |
Global distribution of 16S sequence Y10819 (>99% sequence identity) for Propionibacterium freudenreichii subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | PFRJS14 assembly for Propionibacterium freudenreichii | complete | 1744 | 99 | ||||
| 66792 | PFRJS12-2 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.91 | ||||
| 66792 | PFRJS12-1 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.91 | ||||
| 66792 | PFRJS8 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.9 | ||||
| 66792 | PFRJS11 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.88 | ||||
| 66792 | PFRJS2 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.82 | ||||
| 66792 | PFRJS22-genome assembly for Propionibacterium freudenreichii | complete | 1744 | 98.67 | ||||
| 66792 | PFRJS18 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.64 | ||||
| 66792 | PFRJS-23 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.6 | ||||
| 66792 | PFRJS25 assembly for Propionibacterium freudenreichii | complete | 1744 | 98.55 | ||||
| 66792 | PFRJS4 assembly for Propionibacterium freudenreichii | complete | 1744 | 96.63 | ||||
| 66792 | PFRJS12-3 assembly for Propionibacterium freudenreichii | complete | 1744 | 74.8 | ||||
| 66792 | PFRJS22-ph_1 assembly for Propionibacterium freudenreichii | complete | 1744 | 74.8 | ||||
| 124043 | ASM4266038v1 assembly for Propionibacterium freudenreichii subsp. shermanii CCUG 36819 | scaffold | 1752 | 63.73 | ||||
| 66792 | PFRJS13 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS15 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS17 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS20 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS21 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS7 assembly for Propionibacterium freudenreichii | complete | 1744 | |||||
| 66792 | PFRJS9 assembly for Propionibacterium freudenreichii | complete | 1744 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Propionibacterium freudenreichii subsp. shermanii 16S-23S ribosomal RNA intergenic spacer region, complete sequence | AF218434 | 338 | 1752 | ||
| 1869 | P. freudenreichii subsp. shermanii partial 16S rRNA, 23S rRNA and 5S rRNA genes plus ITS | Y10819 | 5116 | 1744 | ||
| 1869 | Propionibacterium freudenreichii subsp. shermanii strain CIP 103027 16S ribosomal RNA gene, partial sequence | AY883041 | 459 | 1752 |
| 1869 | GC-content (mol%)65.0 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 78.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 90.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.00 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 84.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 88.65 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 62.51 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 80.56 | no |
| 125438 | aerobic | aerobicⓘ | no | 67.81 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 92.78 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 94.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Oxygen determines the requirement for cobalamin but not riboflavin in the growth of Propionibacterium freudenreichii. | Zhang R, Sha Y, Chamlagain B, Edelmann M, Savijoki K, Piironen V, Deptula P, Varmanen P. | Sci Rep | 10.1038/s41598-025-12983-8 | 2025 | ||
| Utilization of propionic acid bacteria in the biotransformation of soy (tofu) whey: Growth and metabolite changes. | Tindjau R, Chua JY, Liu SQ. | J Food Sci | 10.1111/1750-3841.16863 | 2024 | ||
| Gorse (Ulex europeaus) wastes with 5,6-dimethyl benzimidazole supplementation can support growth of vitamin B12 producing commensal gut microbes. | Iyer A, Soto Martin EC, Cameron GA, Louis P, Duncan SH, Bestwick CS, Russell WR. | PLoS One | 10.1371/journal.pone.0290052 | 2024 | ||
| Transcriptome | Aerobic adaptation and metabolic dynamics of Propionibacterium freudenreichii DSM 20271: insights from comparative transcriptomics and surfaceome analysis. | Loivamaa I, Sillanpaa A, Deptula P, Chamlagain B, Edelmann M, Auvinen P, Nyman TA, Savijoki K, Piironen V, Varmanen P. | mSystems | 10.1128/msystems.00615-24 | 2024 | |
| Biotechnology | An artificial coculture fermentation system for industrial propanol production. | Hocq R, Sauer M. | FEMS Microbes | 10.1093/femsmc/xtac013 | 2022 | |
| Co-cultures of Propionibacterium freudenreichii and Bacillus amyloliquefaciens cooperatively upgrade sunflower seed milk to high levels of vitamin B12 and multiple co-benefits. | Tangyu M, Fritz M, Ye L, Aragao Borner R, Morin-Rivron D, Campos-Gimenez E, Bolten CJ, Bogicevic B, Wittmann C. | Microb Cell Fact | 10.1186/s12934-022-01773-w | 2022 | ||
| Safety and efficacy of a feed additive consisting on Propionibacterium freudenreichii ssp. shermaniiATCC PTA-6752 for all animal species (Chr. Hansen A/S). | EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Durjava MF, Kouba M, Lopez-Alonso M, Lopez-Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Ramos F, Sanz Y, Villa RE, Woutersen R, Cocconcelli PS, Glandorf B, Herman L, Prieto Maradona M, Saarela M, Galobart J, Innocenti ML, Brozzi R. | EFSA J | 10.2903/j.efsa.2021.6470 | 2021 | ||
| Dairy Propionibacteria: Probiotic Properties and Their Molecular Bases. | Rossi F, Santonicola S, Giaccone V, Truant A, Colavita G. | Biomolecules | 10.3390/biom15060886 | 2025 | ||
| Use of apple pomace, glycerine, and potato wastewater for the production of propionic acid and vitamin B12. | Piwowarek K, Lipinska E, Hac-Szymanczuk E, Kolotylo V, Kieliszek M. | Appl Microbiol Biotechnol | 10.1007/s00253-022-12076-w | 2022 | ||
| Metabolism | Use of Propionibacterium freudenreichii T82 Strain for Effective Biosynthesis of Propionic Acid and Trehalose in a Medium with Apple Pomace Extract and Potato Wastewater. | Piwowarek K, Lipinska E, Hac-Szymanczuk E, Kot AM, Kieliszek M, Bonin S. | Molecules | 10.3390/molecules26133965 | 2021 | |
| Metabolism | Research on the ability of propionic acid and vitamin B12 biosynthesis by Propionibacterium freudenreichii strain T82. | Piwowarek K, Lipinska E, Hac-Szymanczuk E, Bzducha-Wrobel A, Synowiec A. | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0991-7 | 2018 | |
| One-Year Monitoring of Prevalence and Diversity of Dairy Propionic Acid Bacteria in Raw Milk by Means of Culture-Dependent and Culture-Independent Methods | Bucher C, Burtscher J, Zitz U, Domig K. | Foods | 2024 | |||
| Genetics | De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii. | Deptula P, Laine PK, Roberts RJ, Smolander OP, Vihinen H, Piironen V, Paulin L, Jokitalo E, Savijoki K, Auvinen P, Varmanen P. | BMC Genomics | 10.1186/s12864-017-4165-9 | 2017 | |
| Reprocessing of side-streams towards obtaining valuable bacterial metabolites. | Piwowarek K, Lipinska E, Kieliszek M. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12458-8 | 2023 | ||
| Metabolism | An antimicrobial peptide is produced by extracellular processing of a protein from Propionibacterium jensenii. | Faye T, Brede DA, Langsrud T, Nes IF, Holo H. | J Bacteriol | 10.1128/jb.184.13.3649-3656.2002 | 2002 | |
| Metabolism | Molecular and genetic characterization of propionicin F, a bacteriocin from Propionibacterium freudenreichii. | Brede DA, Faye T, Johnsborg O, Odegard I, Nes IF, Holo H. | Appl Environ Microbiol | 10.1128/aem.70.12.7303-7310.2004 | 2004 | |
| A consolidated review of commercial-scale high-value products from lignocellulosic biomass. | Zheng B, Yu S, Chen Z, Huo YX. | Front Microbiol | 10.3389/fmicb.2022.933882 | 2022 | ||
| Fluorinated vitamin b(12) analogs are cofactors of corrinoid-dependent enzymes: a f-labeled nuclear magnetic resonance probe for identifying corrinoid-protein interactions. | Stupperich E, Eisinger HJ, Kerssebaum R, Nexo E. | Appl Environ Microbiol | 10.1128/aem.59.2.599-603.1993 | 1993 | ||
| In Vivo Functional Properties of Dairy Bacteria. | Aprea G, Del Matto I, Tucci P, Marino L, Scattolini S, Rossi F. | Microorganisms | 10.3390/microorganisms11071787 | 2023 | ||
| Mutation of the Surface Layer Protein SlpB Has Pleiotropic Effects in the Probiotic Propionibacterium freudenreichii CIRM-BIA 129. | do Carmo FLR, Silva WM, Tavares GC, Ibraim IC, Cordeiro BF, Oliveira ER, Rabah H, Cauty C, da Silva SH, Canario Viana MV, Caetano ACB, Dos Santos RG, de Oliveira Carvalho RD, Jardin J, Pereira FL, Folador EL, Le Loir Y, Figueiredo HCP, Jan G, Azevedo V. | Front Microbiol | 10.3389/fmicb.2018.01807 | 2018 | ||
| Isolation and characterization of a 67 kDa oligopeptidase from Propionibacterium freudenreichii ATCC 9614. | Stepaniak L, Gobbetti M, Pripp AH, Sorhaug T. | Italian journal of food science. | 1998 | |||
| Purification and characterization of a 33 kDa subunit oligopeptidase from Propionibacterium freudenreichii ATCC 9614. | Stepaniak L, Tobiassen RO, Chukwu I, Pripp AH, Sorhaug T. | Int Dairy J | 10.1016/s0958-6946(98)00016-8 | 1998 | ||
| A synthetic cell-free 36-enzyme reaction system for vitamin B12 production. | Kang Q, Fang H, Xiang M, Xiao K, Jiang P, You C, Lee SY, Zhang D. | Nat Commun | 10.1038/s41467-023-40932-4 | 2023 | ||
| Comparative sequence analysis of plasmids from Lactobacillus delbrueckii and construction of a shuttle cloning vector. | Lee JH, Halgerson JS, Kim JH, O'Sullivan DJ. | Appl Environ Microbiol | 10.1128/aem.00099-07 | 2007 | ||
| Citrate Cycle Intermediates in the Metabolism of Aspartate and Lactate by Propionibacterium freudenreichii subsp. shermanii. | Crow VL. | Appl Environ Microbiol | 10.1128/aem.53.10.2600-2602.1987 | 1987 | ||
| Enzymology | First evidence of lysogeny in Propionibacterium freudenreichii subsp. shermanii. | Herve C, Coste A, Rouault A, Fraslin JM, Gautier M. | Appl Environ Microbiol | 10.1128/aem.67.1.231-238.2001 | 2001 | |
| Metabolism | Development of a Propionibacterium-Escherichia coli shuttle vector for metabolic engineering of Propionibacterium jensenii, an efficient producer of propionic acid. | Zhuge X, Liu L, Shin HD, Chen RR, Li J, Du G, Chen J. | Appl Environ Microbiol | 10.1128/aem.00737-13 | 2013 | |
| Metabolism of Aspartate by Propionibacterium freudenreichii subsp. shermanii: Effect on Lactate Fermentation. | Crow VL. | Appl Environ Microbiol | 10.1128/aem.52.2.359-365.1986 | 1986 | ||
| Metabolism | Conversion of L-leucine to isovaleric acid by Propionibacterium freudenreichii TL 34 and ITGP23. | Thierry A, Maillard MB, Yvon M. | Appl Environ Microbiol | 10.1128/aem.68.2.608-615.2002 | 2002 | |
| Biochemical and genetic characterization of propionicin T1, a new bacteriocin from Propionibacterium thoenii. | Faye T, Langsrud T, Nes IF, Holo H. | Appl Environ Microbiol | 10.1128/aem.66.10.4230-4236.2000 | 2000 | ||
| Polysaccharide Production by Propionibacteria during Lactose Fermentation. | Crow VL. | Appl Environ Microbiol | 10.1128/aem.54.7.1892-1895.1988 | 1988 | ||
| Metabolism | Identification and quantitation of cobalamin and cobalamin analogues in human feces. | Allen RH, Stabler SP. | Am J Clin Nutr | 10.1093/ajcn/87.5.1324 | 2008 | |
| Metabolism | Sequence changes in the ton box region of BtuB affect its transport activities and interaction with TonB protein. | Cadieux N, Bradbeer C, Kadner RJ. | J Bacteriol | 10.1128/jb.182.21.5954-5961.2000 | 2000 | |
| Stress | Changes in protein synthesis during thermal adaptation of Propionibacterium freudenreichii subsp. shermanii. | Anastasiou R, Leverrier P, Krestas I, Rouault A, Kalantzopoulos G, Boyaval P, Tsakalidou E, Jan G. | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2005.11.015 | 2006 | |
| Enzymology | Capsular exopolysaccharide biosynthesis gene of Propionibacterium freudenreichii subsp. shermanii. | Deutsch SM, Falentin H, Dols-Lafargue M, Lapointe G, Roy D. | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2008.04.006 | 2008 | |
| Metabolism | Correlation of the capsular phenotype in Propionibacterium freudenreichii with the level of expression of gtf, a unique polysaccharide synthase-encoding gene. | Deutsch SM, Le Bivic P, Herve C, Madec MN, LaPointe G, Jan G, Le Loir Y, Falentin H. | Appl Environ Microbiol | 10.1128/aem.02591-09 | 2010 | |
| Metabolism | Genomics of dairy fermentations. | Siezen RJ, Bachmann H. | Microb Biotechnol | 10.1111/j.1751-7915.2008.00067.x | 2008 | |
| Metabolism | Interactions between pyruvate and lactate metabolism in Propionibacterium freudenreichii subsp. shermanii: in vivo (13)C nuclear magnetic resonance studies. | Deborde C, Boyaval P. | Appl Environ Microbiol | 10.1128/aem.66.5.2012-2020.2000 | 2000 | |
| Biotechnology | The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications. | Falentin H, Deutsch SM, Jan G, Loux V, Thierry A, Parayre S, Maillard MB, Dherbecourt J, Cousin FJ, Jardin J, Siguier P, Couloux A, Barbe V, Vacherie B, Wincker P, Gibrat JF, Gaillardin C, Lortal S. | PLoS One | 10.1371/journal.pone.0011748 | 2010 | |
| Enzymology | Mur-LH, the broad-spectrum endolysin of Lactobacillus helveticus temperate bacteriophage phi-0303. | Deutsch SM, Guezenec S, Piot M, Foster S, Lortal S. | Appl Environ Microbiol | 10.1128/aem.70.1.96-103.2004 | 2004 | |
| Lipase and Esterase Activities of Propionibacterium freudenreichii subsp. freudenreichii. | Dupuis C, Corre C, Boyaval P. | Appl Environ Microbiol | 10.1128/aem.59.12.4004-4009.1993 | 1993 | ||
| Paracrystalline surface layers of dairy propionibacteria. | Lortal S, Rouault A, Cesselin B, Sleytr UB. | Appl Environ Microbiol | 10.1128/aem.59.8.2369-2374.1993 | 1993 | ||
| Metabolism | Mechanism of conjugated linoleic acid and vaccenic acid formation in human faecal suspensions and pure cultures of intestinal bacteria. | McIntosh FM, Shingfield KJ, Devillard E, Russell WR, Wallace RJ | Microbiology (Reading) | 10.1099/mic.0.022921-0 | 2009 | |
| Genetics | In silico exploration of the fructose-6-phosphate phosphorylation step in glycolysis: genomic evidence of the coexistence of an atypical ATP-dependent along with a PPi-dependent phosphofructokinase in Propionibacterium freudenreichii subsp. shermanii. | Meurice G, Deborde C, Jacob D, Falentin H, Boyaval P, Dimova D | In Silico Biol | 2004040043 | 2004 | |
| Enzymology | Isolation and characterization of proline iminopeptidase from Propionibacterium freudenreichii ATCC 9614. | Stepaniak L | Nahrung | 10.1002/(SICI)1521-3803(20000301)44:2<102::AID-FOOD102>3.0.CO;2-Z | 2000 | |
| Phylogeny | Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR. | Kaufmann P, Pfefferkorn A, Teuber M, Meile L | Appl Environ Microbiol | 10.1128/aem.63.4.1268-1273.1997 | 1997 | |
| Enzymology | Properties of Alanine Dehydrogenase and Aspartase from Propionibacterium freudenreichii subsp. shermanii. | Crow VL | Appl Environ Microbiol | 10.1128/aem.53.8.1885-1892.1987 | 1987 | |
| Utilization of Lactate Isomers by Propionibacterium freudenreichii subsp. shermanii: Regulatory Role for Intracellular Pyruvate. | Crow VL | Appl Environ Microbiol | 10.1128/aem.52.2.352-358.1986 | 1986 |
| #1869 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4902 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41657 | ; Curators of the CIP; |
| #53417 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 36819 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68380 | Automatically annotated from API rID32A . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119456 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103027 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data