Luteococcus japonicus | CCUG 38729, DSM 10547, ATCC 51527, CCM 2142, CIP 104066, IFO 15385, NBRC 15385, OUT 8100

Strain identifier

BacDive ID: 12622

Type strain:

Species: Luteococcus japonicus

Culture col. no.: CCUG 38729, DSM 10547, ATCC 51527, CCM 2142, CIP 104066, IFO 15385, NBRC 15385, OUT 8100

Strain history: CIP <- 1994, IFO <- CCM <- M. Oda, Japan

SI-ID 386984

ATCC 51527, IFO 15385, CCM 2142, CCUG 38729, CIP 104066, DSM 10547, KCTC 9795, NBRC 15385

Other strains from Luteococcus japonicus

L. japonicus DSM 10546, ATCC 51526, CIP 104067, ... (type strain)

Section

External links

Luteococcus japonicus CCUG 38729 is an aerobe, mesophilic bacterium that was isolated from water for brewing sake "Miyamizu".

aerobe
mesophilic
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Propionibacteriaceae*
	Genus	*Luteococcus*
	Species	**Luteococcus japonicus**
	Full Scientific Name (LPSN)	Luteococcus japonicus Tamura et al. 1994

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3921]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #3921]

Culture medium growth

[Ref.: #3921]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3921]

Culture medium composition

expand / minimize

[Ref.: #34657]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #34657]

Culture medium growth

[Ref.: #34657]

Culture medium composition

expand / minimize

[Ref.: #120320]

Culture medium

CIP Medium 3

[Ref.: #120320]

Culture medium growth

[Ref.: #120320]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #3921]	growth	28 °C
[Ref.: #34657]	growth	30 °C
[Ref.: #54420]	growth	30 °C

[Ref.: #3921]	Temperature range	mesophilic
[Ref.: #34657]	Temperature range	mesophilic
[Ref.: #54420]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #54420]

Oxygen tolerance

aerobe

[Ref.: #3921]	Murein short key	A41.01
[Ref.: #3921]	Murein types	A3gamma LL-Dpm-Gly

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	lactose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melezitose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	+	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68381]		acetoin ChEBI	no	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68381]		acetoin ChEBI	-	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68381]	alpha-galactosidase	+	3.2.1.22	* from API rID32STR, API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-galactosidase	+	3.2.1.23	* from API rID32STR, API zym
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR, API zym
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR, API zym
[Ref.: #68381]	beta-mannosidase	-	3.2.1.25	* from API rID32STR
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68381]	glycyl tryptophan arylamidase	+		* from API rID32STR
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68381]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32STR
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68381]	urease	+	3.5.1.5	* from API rID32STR
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #54420]	4356	-	+	+	-	+	-	-	+	+	-	+	-	+	-	+	-	-	-	+	+	-	+	-	-	-	+	-	+	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #54420]	3036	-	+	-	-	-	+	-	-	-	-	+	-	+	+	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3921]	Sample type/isolated from	water for brewing sake "Miyamizu"
[Ref.: #3921]	Geographic location (country and/or sea, region)	Japan, Hyogo Prefecture
[Ref.: #3921]	Country	Japan
[Ref.: #3921]	Country ISO 3 Code	JPN
[Ref.: #3921]	Continent	Asia

[Ref.: #54420]	Sample type/isolated from	Brewing water 'Miyamizu'
[Ref.: #54420]	Geographic location (country and/or sea, region)	Kobe
[Ref.: #54420]	Country	Japan
[Ref.: #54420]	Country ISO 3 Code	JPN
[Ref.: #54420]	Continent	Asia

[Ref.: #120320]	Sample type/isolated from	Environment, Brewing water
[Ref.: #120320]	Geographic location (country and/or sea, region)	Kobe
[Ref.: #120320]	Country	Japan
[Ref.: #120320]	Country ISO 3 Code	JPN
[Ref.: #120320]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Fermented
#Environmental	#Aquatic	-
#Engineered	#Food production	#Beverage

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3921]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120320]	Biosafety level	1	Risk group (French classification)

Availability in culture collections External links

[Ref.: #3921]

Culture collection no.

CCUG 38729, DSM 10547, ATCC 51527, CCM 2142, CIP 104066, IFO 15385, NBRC 15385, OUT 8100

[Ref.: #81836]

SI-ID 386984

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteococcus japonicus gen. nov., sp. nov., a new gram-positive coccus with LL-diaminopimelic acid in the cell wall.	Tamura T, Takeuchi M, Yokota A	Int J Syst Bacteriol	10.1099/00207713-44-2-348	1994	*

References

#3921

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10547

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#34657 ; Curators of the CIP;
#54420 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38729

#68381

Automatically annotated from API rID32STR .

#68382

Automatically annotated from API zym .

#81836

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID386984.1 )

#120320 Collection of Institut Pasteur ; Curators of the CIP; CIP 104066
* These data were automatically processed and therefore are not curated

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