Name: Microlunatus antarcticus AA-1042
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12612

Type strain:

Species: Microlunatus antarcticus

Strain Designation: AA-1042

Culture col. no.: DSM 11053, IFO 16127, NBRC 16127, JCM 11651, IMSNU 22078, KACC 14501, KCTC 9822

Strain history: IFO 16127 <-- DSM 11053 <-- P. Hirsch AA-1042.

NCBI tax ID(s): 53388 (species)

SI-ID 49007

DSM 11053, IFO 16127, KCTC 9822, JCM 11651, NBRC 16127

Section

Microlunatus antarcticus AA-1042 is a psychrophilic bacterium that was isolated from sandstone.

psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Propionibacteriaceae*
	Genus	*Microlunatus*
	Species	**Microlunatus antarcticus**
	Full Scientific Name (LPSN)	Microlunatus antarcticus (Schumann et al. 1997) Nouioui et al. 2018

Synonym

Friedmanniella antarctica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %95.675

[Ref.: #18358]	Colony color	Yellow orange (2000)
[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 2

[Ref.: #18358]	Colony color	Yellow orange (2000)
[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 4

[Ref.: #18358]	Colony color	Yellow orange (2000)
[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 5

[Ref.: #18358]	Colony color	Yellow orange (2000)
[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 6

[Ref.: #18358]	Colony color	Yellow orange (2000)
[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 7

[Ref.: #18358]	Incubation period	10-14 days
[Ref.: #18358]	Cultivation medium used	ISP 3

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 2

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 3

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 4

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 5

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 6

[Ref.: #18358]	Multicellular complex forming ability	no
[Ref.: #18358]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4172]

Culture medium

RICH MEDIUM (DSMZ Medium 736)

[Ref.: #4172]

Culture medium growth

[Ref.: #4172]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4172]

Culture medium composition

expand / minimize

[Ref.: #4172]

Culture medium

PYGV AGAR (DSMZ Medium 621)

[Ref.: #4172]

Culture medium growth

[Ref.: #4172]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4172]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 2

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 4

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 5

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 6

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 7

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

[Ref.: #18358]

Culture medium

ISP 3

[Ref.: #18358]

Culture medium growth

[Ref.: #18358]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #4172]	growth	20 °C
[Ref.: #18358]	optimum	28 °C
[Ref.: #67770]	growth	22 °C

[Ref.: #4172]	Temperature range	psychrophilic
[Ref.: #18358]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.775

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18358]		NaCl		maximum	5	%

[Ref.: #4172]	Murein short key	A42.01
[Ref.: #4172]	Murein types	A3gamma' LL-Dpm-Gly

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18358]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18358]	cellulose ChEBI	+
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #18358]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E, API Coryne
[Ref.: #18358]	glucose ChEBI	+
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #18358]	mannitol ChEBI	+
[Ref.: #18358]	myo-inositol ChEBI	-
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18358]	raffinose ChEBI	-
[Ref.: #18358]	rhamnose ChEBI	-
[Ref.: #18358]	sucrose ChEBI	+
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E, API Coryne
[Ref.: #18358]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68379]	alpha-glucosidase	-	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne, API zym
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne, API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18358]	8	-	-	-	-	+	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18358]	47	-	-	-	-	-	+	-	-	+	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18358]	68	not determinedn.d.	-	-	-	-	+	-	-	-	-	+	-	+	+	-	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4172]	Sample type/isolated from	sandstone
[Ref.: #4172]	Geographic location (country and/or sea, region)	Linnaeus Terrace, McMurdo Dry Valley, 1600 m alt.
[Ref.: #4172]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Antarctic sandstone
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Geologic

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18358]	Biosafety level	1	German classification
[Ref.: #4172]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4172]	F.antarctica 16S rRNA gene	Z78206	1473	ENA	53388 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Microlunatus antarcticus DSM 11053	GCA_014193425	contig	GenBank	53388 tax ID	*
[Ref.: #66792]	Friedmanniella antarctica strain DSM 11053	53388.3	wgs	PATRIC	53388 tax ID	*
[Ref.: #66792]	Microlunatus antarcticus DSM 11053	2824927556	draft	JGI IMG/M	53388 tax ID	*

[Ref.: #4172]

GC-content

73 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Friedmanniella antarctica strain DSM 11053 PATRIC: 53388.3
[Ref.: #69481]	spore-forming	no	64	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Friedmanniella antarctica strain DSM 11053 PATRIC: 53388.3
[Ref.: #69480]	gram-positive	yes	89.715	no
[Ref.: #69480]	anaerobic	no	99.015	no
[Ref.: #69480]	halophile	no	94.557	no
[Ref.: #69480]	spore-forming	no	84.789	no
[Ref.: #69480]	glucose-util	yes	88.976	yes
[Ref.: #69480]	thermophile	no	99.091	yes
[Ref.: #69480]	motile	no	94.122	no
[Ref.: #69480]	flagellated	no	98.669	no
[Ref.: #69480]	aerobic	yes	91.833	no
[Ref.: #69480]	glucose-ferment	no	87.922	yes

Availability in culture collections External links

[Ref.: #4172]

Culture collection no.

DSM 11053, IFO 16127, NBRC 16127, JCM 11651, IMSNU 22078, KACC 14501, KCTC 9822

[Ref.: #81826]

SI-ID 49007

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Friedmanniella flava sp. nov., a soil actinomycete.	Zhang X, Zhang J, Zhang Y, Xin Y, He H	Int J Syst Evol Microbiol	10.1099/ijs.0.043984-0	2012	*
Phylogeny	Friedmanniella antarctica gen. nov., sp. nov., an LL-diaminopimelic acid-containing actinomycete from Antarctic sandstone.	Schumann P, Prauser H, Rainey FA, Stackebrandt E, Hirsch P	Int J Syst Bacteriol	10.1099/00207713-47-2-278	1997	*

References

#4172

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11053

#18358

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81826

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49007.1 )

* These data were automatically processed and therefore are not curated

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Friedmanniella antarctica strain DSM 11053

Friedmanniella antarctica strain DSM 11053

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