Prevotella corporis (DSM 18810, ATCC 33547, CIP 105107)

Name: Prevotella corporis (DSM 18810, ATCC 33547, CIP 105107)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12551

Type strain

Strain Designation N532-70A, N 532-70A

Culture col. no. DSM 18810 ATCC 33547 CIP 105107 JCM 8529 NCTC 13065 7 more

NCBI tax ID(s) 1122981 28128

Special Collections DSMZ CCUG JCM CIP KCTC

Links

Prevotella corporis N532-70A is an anaerobe, mesophilic, Gram-negative prokaryote that was isolated from cervical swab.

Gram-negative rod-shaped anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 47019

KCTC 15680,ATCC 33547,CCUG 15404,CIP 105107,JCM 8529,NCTC 13065,DSM 18810

@ref 20215

Last LPSN update 2025-12-16 09:49:52

Domain Pseudomonadati

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella corporis

Full scientific name Prevotella corporis (Johnson and Holdeman 1983) Shah and Collins 1990

Synonyms (1)

Bacteroides corporis

Morphology

Cell morphology

@ref	Gram stain	Cell shape
118753	negative	rod-shaped
125438	negative
125439	negative

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7711	CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)	Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water
7711	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
39198	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
118753	CIP Medium 20	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7711	positive	growth	37	mesophilic
39198	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
7711	anaerobe
125438	anaerobe
125439	anaerobe

Spore formation

@ref	Spore formation	Confidence
125438		93.916
125439		99.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	+		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	ppGpp biosynthesis	100	4 of 4
66794	vitamin K metabolism	100	5 of 5
66794	glycogen metabolism	100	5 of 5
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	lipid A biosynthesis	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	NAD metabolism	83.33	15 of 18
66794	flavin biosynthesis	80	12 of 15
66794	starch degradation	80	8 of 10
66794	photosynthesis	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	chorismate metabolism	77.78	7 of 9
66794	vitamin B1 metabolism	76.92	10 of 13
66794	CMP-KDO biosynthesis	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	peptidoglycan biosynthesis	73.33	11 of 15
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	serine metabolism	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	purine metabolism	64.89	61 of 94
66794	glycolysis	64.71	11 of 17
66794	pyrimidine metabolism	64.44	29 of 45
66794	vitamin B6 metabolism	63.64	7 of 11
66794	isoleucine metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	cellulose degradation	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	myo-inositol biosynthesis	60	6 of 10
66794	tetrahydrofolate metabolism	57.14	8 of 14
66794	CO2 fixation in Crenarchaeota	55.56	5 of 9
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	glutamate and glutamine metabolism	53.57	15 of 28
66794	butanoate fermentation	50	2 of 4
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	threonine metabolism	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	suberin monomers biosynthesis	50	1 of 2
66794	adipate degradation	50	1 of 2
66794	alanine metabolism	48.28	14 of 29
66794	non-pathway related	47.37	18 of 38
66794	phenylalanine metabolism	46.15	6 of 13
66794	sulfate reduction	46.15	6 of 13
66794	valine metabolism	44.44	4 of 9
66794	cysteine metabolism	44.44	8 of 18
66794	propanol degradation	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	methylglyoxal degradation	40	2 of 5
66794	polyamine pathway	39.13	9 of 23
66794	lipid metabolism	38.71	12 of 31
66794	oxidative phosphorylation	38.46	35 of 91
66794	methionine metabolism	38.46	10 of 26
66794	lysine metabolism	38.1	16 of 42
66794	ketogluconate metabolism	37.5	3 of 8
66794	pentose phosphate pathway	36.36	4 of 11
66794	citric acid cycle	35.71	5 of 14
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	UDP-GlcNAc biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	cyanate degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	tryptophan metabolism	31.58	12 of 38
66794	leucine metabolism	30.77	4 of 13
66794	Entner Doudoroff pathway	30	3 of 10
66794	glycine metabolism	30	3 of 10
66794	coenzyme M biosynthesis	30	3 of 10
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	degradation of pentoses	28.57	8 of 28
66794	degradation of hexoses	27.78	5 of 18
66794	metabolism of disaccharids	27.27	3 of 11
66794	proline metabolism	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	lactate fermentation	25	1 of 4
66794	degradation of sugar alcohols	25	4 of 16
66794	cyclohexanol degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	biotin biosynthesis	25	1 of 4
66794	arginine metabolism	25	6 of 24
66794	histidine metabolism	24.14	7 of 29
66794	urea cycle	23.08	3 of 13
66794	arachidonic acid metabolism	22.22	4 of 18
66794	tyrosine metabolism	21.43	3 of 14
66794	glutathione metabolism	21.43	3 of 14
66794	heme metabolism	21.43	3 of 14

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
7711	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	-	+	+/-	+	-	+/-	+	+/-	+	+	-
7711	-	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+	-	+	-	+/-	-	-	+	-	+/-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Infection	#Patient
#Infection	#Patient
#Host	#Human
#Host Body-Site	#Urogenital tract

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7711	cervical swab	United Kingdom	GBR	Europe
46244	Cervical swab
67770	Cervical swab
118753	Cervical swab

Taxonmaps

69479

Global distribution of 16S sequence AB547677 (>99% sequence identity) for Prevotella corporis subclade from Microbeatlas

Aquatic Samples	241
Soil Samples	154
Animal Samples	23060
Plant Samples	118
Total Samples	23573

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7711	2	Risk group (German classification) According to TRBA 466
118753	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM43052v1 assembly for Prevotella corporis DSM 18810 = JCM 8529	scaffold	GCA_000430525	1122981.3	2523533623	1122981	60.86
124043	ASM3953566v1 assembly for Prevotella corporis JCM 8529	scaffold	GCA_039535665			28128	53.93
67770	ASM61336v1 assembly for Prevotella corporis DSM 18810 = JCM 8529	contig	GCA_000613365	1235812.3	2585427894	1122981	33.06

Genome browser: GCA_000430525

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Prevotella corporis gene for 16S ribosomal RNA, partial sequence, strain: JCM 8529	AB547677	1479		28128
7711	Prevotella corporis strain ATCC 33547 16S ribosomal RNA gene, partial sequence	L16465	1473		28128

GC content

@ref	GC-content (mol%)	Method
7711	44.1	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Prevotella corporis DSM 18810 = JCM 8529
NCBI: GCA_000430525

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	99.30	no
125439	gram_stain	BacteriaNetⓘ	negative	97.00	no
125439	motility	BacteriaNetⓘ	no	80.80	no
125439	spore_formation	BacteriaNetⓘ	no	99.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotella corporis DSM 18810
PATRIC: 1122981.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.14	no
125438	anaerobic	anaerobicⓘ	yes	90.88	no
125438	spore-forming	spore-formingⓘ	no	93.92	no
125438	aerobic	aerobicⓘ	no	96.94	yes
125438	thermophilic	thermophileⓘ	no	93.30	no
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	In Vitro and In Vivo Activities of DS-2969b, a Novel GyrB Inhibitor, against Clostridium difficile.	Mathur T, Barman TK, Kumar M, Singh D, Kumar R, Khera MK, Yamada M, Inoue SI, Upadhyay DJ, Masuda N.	Antimicrob Agents Chemother	10.1128/aac.02157-17	2018
Enzymology	Use of the genomic subtractive hybridization technique to develop a real-time PCR assay for quantitative detection of Prevotella spp. in oral biofilm samples.	Nagashima S, Yoshida A, Suzuki N, Ansai T, Takehara T.	J Clin Microbiol	10.1128/jcm.43.6.2948-2951.2005	2005
Enzymology	Loop-mediated isothermal amplification method for rapid detection of the periodontopathic bacteria Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola.	Yoshida A, Nagashima S, Ansai T, Tachibana M, Kato H, Watari H, Notomi T, Takehara T.	J Clin Microbiol	10.1128/jcm.43.5.2418-2424.2005	2005
Pathogenicity	In vaginal fluid, bacteria associated with bacterial vaginosis can be suppressed with lactic acid but not hydrogen peroxide.	O'Hanlon DE, Moench TR, Cone RA.	BMC Infect Dis	10.1186/1471-2334-11-200	2011
Metabolism	A novel mechanism for desulfation of mucin: identification and cloning of a mucin-desulfating glycosidase (sulfoglycosidase) from Prevotella strain RS2.	Rho JH, Wright DP, Christie DL, Clinch K, Furneaux RH, Roberton AM.	J Bacteriol	10.1128/jb.187.5.1543-1551.2005	2005
Enzymology	Detection of unculturable bacteria in periodontal health and disease by PCR.	Harper-Owen R, Dymock D, Booth V, Weightman AJ, Wade WG.	J Clin Microbiol	10.1128/jcm.37.5.1469-1473.1999	1999
Enzymology	Rapid presumptive identification of black-pigmented gram-negative anaerobic bacteria by using 4-methylumbelliferone derivatives.	Moncla BJ, Braham P, Rabe LK, Hillier SL.	J Clin Microbiol	10.1128/jcm.29.9.1955-1958.1991	1991
	Conservation of fimbriae and the hemagglutinating adhesin HA-Ag2 among Porphyromonas gingivalis strains and other anaerobic bacteria studied by epitope mapping analysis.	Du L, Pellen-Mussi P, Chandad F, Mouton C, Bonnaure-Mallet M.	Clin Diagn Lab Immunol	10.1128/cdli.4.6.711-714.1997	1997
	Characterization of recombinant and native forms of a cell surface antigen of Porphyromonas (Bacteroides) gingivalis.	Joe A, Yamamoto A, McBride BC.	Infect Immun	10.1128/iai.61.8.3294-3303.1993	1993
	Demonstration of human immunoglobulin G Fc-binding activity in oral bacteria.	Grenier D, Michaud J.	Clin Diagn Lab Immunol	10.1128/cdli.1.2.247-249.1994	1994
Enzymology	Detection of Porphyromonas gingivalis from saliva by PCR by using a simple sample-processing method.	Matto J, Saarela M, Alaluusua S, Oja V, Jousimies-Somer H, Asikainen S.	J Clin Microbiol	10.1128/jcm.36.1.157-160.1998	1998
Enzymology	Use of synthetic oligonucleotide DNA probes for identification and direct detection of Bacteroides forsythus in plaque samples.	Moncla BJ, Motley ST, Braham P, Ewing L, Adams TH, Vermeulen NM.	J Clin Microbiol	10.1128/jcm.29.10.2158-2162.1991	1991
Enzymology	High levels of Gardnerella vaginalis detected with an oligonucleotide probe combined with elevated pH as a diagnostic indicator of bacterial vaginosis.	Sheiness D, Dix K, Watanabe S, Hillier SL.	J Clin Microbiol	10.1128/jcm.30.3.642-648.1992	1992
	Field Study on the Prevalence of Ovine Footrot, Contagious Ovine Digital Dermatitis, and Their Associated Bacterial Species in Swedish Sheep Flocks.	Rosander A, Mourath S, Konig U, Nyman A, Frosth S.	Pathogens	10.3390/pathogens12101224	2023
	The Presence of Treponema spp. in Equine Hoof Canker Biopsies and Skin Samples from Bovine Digital Dermatitis Lesions.	Marcekova P, Mad'ar M, Stykova E, Kacirova J, Sondorova M, Mudron P, Zert Z.	Microorganisms	10.3390/microorganisms9112190	2021
	The microbiome in endometrial cancer: vaginal milieu matters.	Govorov I, Komlichenko E, Ulrikh E, Dikareva E, Pervunina T, Vazhenina O, Dzharbaeva A, Kalinina O, Zaikova E, Razumova Z, Mints M, Sitkin S.	Front Med (Lausanne)	10.3389/fmed.2025.1533344	2025
	A dietary intervention for postmenopausal hot flashes: A potential role of gut microbiome. An exploratory analysis.	Kahleova H, Holtz DN, Strom N, La Reau A, Kolipaka S, Schmidt N, Hata E, Znayenko-Miller T, Holubkov R, Barnard ND.	Complement Ther Med	10.1016/j.ctim.2023.103002	2023
	Association of Gut Dysbiosis with Disease Phenotype and Treatment in Systemic Lupus Erythematosus.	Medina-Martinez I, Gil-Gutierrez R, Garcia-Garcia J, de la Hera-Fernandez FJ, Navarrete-Navarrete N, Zamora-Pasadas M, Ortego-Centeno N, Callejas-Rubio JL, Garcia-Garcia F, Galvez-Peralta J, Rodriguez-Nogales A, Correa-Rodriguez M, Rueda-Medina B.	Med Sci (Basel)	10.3390/medsci13030151	2025
Phylogeny	Quantitative profiling of bacterial communities via full length 16S rRNA gene sequencing with internal controls: optimization and validation across diverse human microbiomes.	Valido E, Bertolo A, Stoyanov J.	BMC Microbiol	10.1186/s12866-025-04399-1	2025
Genetics	Shotgun metagenomics of the vaginal microbiome in cervical shortening and preterm birth risk.	Lee KY, Shin SH, Park G, Kang SH, Kang HJ, Kim J, Lee JJ, Son GH, Hong JY.	Sci Rep	10.1038/s41598-025-23737-x	2025
	Profiling of vaginal microbial communities in Chilean women via self-sampling and nanopore sequencing.	Oliva-Arancibia B, Villanueva P, Ugalde JA.	Sci Rep	10.1038/s41598-025-23837-8	2025
Transcriptome	Characteristics and filtering of low-frequency artificial short deletion variations based on nanopore sequencing.	Ye F, Zhu J, Zhang X, Zhang J, Xie Z, Yang T, Han Y, Yang X, Ren Z, Ni M.	Gigascience	10.1093/gigascience/giaf018	2025
Phylogeny	Long-read 16S rRNA amplicon sequencing reveals microbial characteristics in patients with colorectal adenomas and carcinoma lesions in Egypt.	El Leithy AA, Youssef ASE, Nassar A, Aziz RK, Khaled NM, Mahrous MT, Farahat GN, Mohamed AH, Bakr YM.	Gut Pathog	10.1186/s13099-025-00681-9	2025
	Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance.	Bloemen B, Gand M, Vanneste K, Marchal K, Roosens NHC, De Keersmaecker SCJ.	Sci Rep	10.1038/s41598-023-46771-z	2023
Phylogeny	Microbial characterization of the nasal cavity in patients with allergic rhinitis and non-allergic rhinitis.	Che Y, Wang N, Ma Q, Liu J, Xu Z, Li Q, Wang J, Sun Y.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1166389	2023
Pathogenicity	A comprehensive benchmarking of adaptive sampling tools for nanopore sequencing.	Yang L, Lin Y, Li P, Wang K, Li J, Liu Y, Bo X, Ni M, Li P, Song H.	Genome Biol	10.1186/s13059-025-03729-w	2025
Enzymology	Hyperbaric oxygen therapy in a case of cervical abscess extending to anterior mediastinum, with isolation of Prevotella corporis.	Ciodaro F, Gazia F, Galletti B, Galletti F.	BMJ Case Rep	10.1136/bcr-2019-229873	2019
	Identification of proteotoxic and proteoprotective bacteria that non-specifically affect proteins associated with neurodegenerative diseases.	Walker AC, Bhargava R, Bucher MJ, Argote YM, Brust AS, Czyz DM.	iScience	10.1016/j.isci.2024.110828	2024
Phylogeny	Dysbiosis of gut microbiota with enriched pro-inflammatory species in children with idiopathic short stature: a case-control study	Zeng Q, Feng X, Hu Y, Su S, Luo B, Chen J.	Sci Rep		2025
	Large Recurrent Mediastinal Abscess Presenting With Cardiopulmonary Collapse.	Kalivoda B, Lackey A, Mainali A, Guan J.	Cureus	10.7759/cureus.14653	2021
	Bacterial transfer during sexual intercourse as a tool for forensic detection.	Dixon R, Egan S, Payne M, Mullally C, Chapman B.	iScience	10.1016/j.isci.2025.111861	2025
	Effects of Combined Periodontal, Endodontic, and Dentoalveolar Surgical Treatments on Laboratory Parameters in Patients with Hyperlipidemia-A Clinical Interventional Study.	Martos R, Harangi M, Szabo J, Foldvari A, Sandor J, Katona E, Tar I, Paragh G, Kiss C, Marton I.	J Clin Med	10.3390/jcm14010241	2025
Phylogeny	Integrated analysis of gut and oral microbiome in men who have sex with men with HIV Infection.	Li S, Su B, Wu H, He Q, Zhang T.	Microbiol Spectr	10.1128/spectrum.01064-23	2023
Phylogeny	Comparative analysis of metagenomic classifiers for long-read sequencing datasets.	Maric J, Krizanovic K, Riondet S, Nagarajan N, Sikic M.	BMC Bioinformatics	10.1186/s12859-024-05634-8	2024
	ChipFilter: Microfluidic-Based Comprehensive Sample Preparation Methodology for Microbial Consortia.	Ravi Kumar RK, Ndiaye MM, Haddad I, Vinh J, Verdier Y.	J Proteome Res	10.1021/acs.jproteome.3c00288	2024
Genetics	Genomic and taxonomic evaluation of 38 Treponema prophage sequences.	Ridgway R, Lu H, Blower TR, Evans NJ, Ainsworth S.	BMC Genomics	10.1186/s12864-024-10461-5	2024
Phylogeny	RESCUE: a validated Nanopore pipeline to classify bacteria through long-read, 16S-ITS-23S rRNA sequencing.	Petrone JR, Rios Glusberger P, George CD, Milletich PL, Ahrens AP, Roesch LFW, Triplett EW.	Front Microbiol	10.3389/fmicb.2023.1201064	2023
	Bacteria-Derived Protein Aggregates Contribute to the Disruption of Host Proteostasis.	Walker AC, Bhargava R, Dove AS, Brust AS, Owji AA, Czyz DM.	Int J Mol Sci	10.3390/ijms23094807	2022
Phylogeny	Integrated analysis reveals important differences in the gut and oropharyngeal microbiota between children with mild and severe hand, foot, and mouth disease.	Zhang N, Mou D, Li T, Chen Z, Ma C, Liang L, He Q.	Emerg Microbes Infect	10.1080/22221751.2023.2192819	2023
Phylogeny	Nanopore Is Preferable over Illumina for 16S Amplicon Sequencing of the Gut Microbiota When Species-Level Taxonomic Classification, Accurate Estimation of Richness, or Focus on Rare Taxa Is Required.	Szoboszlay M, Schramm L, Pinzauti D, Scerri J, Sandionigi A, Biazzo M.	Microorganisms	10.3390/microorganisms11030804	2023
Genetics	Unraveling the impact of host genetics and factors on the urinary microbiome in a young population.	Zou L, Zhang Z, Chen J, Guo R, Tong X, Ju Y, Lu H, Yang H, Wang J, Zong Y, Xu X, Jin X, Xiao L, Jia H, Zhang T, Liu X.	mBio	10.1128/mbio.02773-24	2024
	Gut microbiome compositional and functional features associate with Alzheimer's disease pathology.	Kang JW, Khatib LA, Heston MB, Dilmore AH, Labus JS, Deming Y, Schimmel L, Blach C, McDonald D, Gonzalez A, Bryant M, Ulland TK, Johnson SC, Asthana S, Carlsson CM, Chin NA, Blennow K, Zetterberg H, Rey FE, Alzheimer Gut Microbiome Project Consortium, Kaddurah-Daouk R, Knight R, Bendlin BB.	Alzheimers Dement	10.1002/alz.70417	2025
Phylogeny	Behavior, hormone, and gut microbiota change by YYNS intervention in an OVX mouse model.	Lei H, Liu J, Deng J, Zou P, Zou Z, Li Z, Li H, Luo L, Tan Z.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1445741	2024
Genetics	Insights into gut microbiomes in stem cell transplantation by comprehensive shotgun long-read sequencing.	Spohr P, Scharf S, Rommerskirchen A, Henrich B, Jager P, Klau GW, Haas R, Dilthey A, Pfeffer K.	Sci Rep	10.1038/s41598-024-53506-1	2024
	Pediatric intensive care unit treatment alters the diversity and composition of the gut microbiota and antimicrobial resistance gene expression in critically ill children.	Xu J, Kong X, Li J, Mao H, Zhu Y, Zhu X, Xu Y.	Front Microbiol	10.3389/fmicb.2023.1237993	2023
Genetics	MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects.	Vancaester E, Blaxter ML.	Wellcome Open Res	10.12688/wellcomeopenres.20730.1	2024
Genetics	Investigating gut microbiota-blood and urine metabolite correlations in early sepsis-induced acute kidney injury: insights from targeted KEGG analyses.	Xu Y, Xu J, Zhu Y, Mao H, Li J, Kong X, Zhu X, Zhang J.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1375874	2024
Genetics	Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets.	Portik DM, Brown CT, Pierce-Ward NT.	BMC Bioinformatics	10.1186/s12859-022-05103-0	2022
	Prevotella are major contributors of sialidases in the human vaginal microbiome.	Pelayo P, Hussain FA, Werlang CA, Wu CM, Woolston BM, Xiang CM, Rutt L, France MT, Ravel J, Ribbeck K, Kwon DS, Balskus EP.	Proc Natl Acad Sci U S A	10.1073/pnas.2400341121	2024
Genetics	Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.	Seol D, Lim JS, Sung S, Lee YH, Jeong M, Cho S, Kwak W, Kim H.	Microbiol Spectr	10.1128/spectrum.02017-21	2022
Metabolism	Crystal structure and functional implication of bacterial STING.	Ko TP, Wang YC, Yang CS, Hou MH, Chen CJ, Chiu YF, Chen Y.	Nat Commun	10.1038/s41467-021-26583-3	2022
	Previse preterm birth in early pregnancy through vaginal microbiome signatures using metagenomics and dipstick assays.	Talukdar D, Sarkar M, Ahrodia T, Kumar S, De D, Nath S, Jana P, Verma J, Mehta O, Kothidar A, Yodhaanjali JR, Sharma K, Bakshi S, Singh U, Kshetrapal P, Wadhwa N, Thiruvengadam R, Garbh-Ini study group, Nair GB, Bhatnagar S, Mukherjee S, Das B.	iScience	10.1016/j.isci.2024.111238	2024
	Rapid detection of invasive Mycobacterium chimaera disease via a novel plasma-based next-generation sequencing test.	Nomura J, Rieg G, Bluestone G, Tsai T, Lai A, Terashita D, Bercovici S, Hong DK, Lee BP.	BMC Infect Dis	10.1186/s12879-019-4001-8	2019
Pathogenicity	Oral Prevotella Species and Their Connection to Events of Clinical Relevance in Gastrointestinal and Respiratory Tracts.	Kononen E, Gursoy UK.	Front Microbiol	10.3389/fmicb.2021.798763	2021
Genetics	Alterations in Gut Microbiome Composition and Function in Irritable Bowel Syndrome and Increased Probiotic Abundance with Daily Supplementation.	Phan J, Nair D, Jain S, Montagne T, Flores DV, Nguyen A, Dietsche S, Gombar S, Cotter P.	mSystems	10.1128/msystems.01215-21	2021
	Deep Neck Infection and Descending Mediastinitis as a Complication of Propionibacterium acnes Odontogenic Infection.	Brotfain E, Koyfman L, Saidel-Odes L, Borer A, Refaely Y, Klein M.	Case Rep Infect Dis	10.1155/2015/190134	2015
Genetics	Bacillus subtilis and Macleaya cordata extract regulate the rumen microbiota associated with enteric methane emission in dairy cows.	Jia P, Dong LF, Tu Y, Diao QY.	Microbiome	10.1186/s40168-023-01654-3	2023
Genetics	Expanded microbiome niches of RAG-deficient patients.	Blaustein RA, Shen Z, Kashaf SS, Lee-Lin S, Conlan S, NISC Comparative Sequencing Program, Bosticardo M, Delmonte OM, Holmes CJ, Taylor ME, Banania G, Nagao K, Dimitrova D, Kanakry JA, Su H, Holland SM, Bergerson JRE, Freeman AF, Notarangelo LD, Kong HH, Segre JA.	Cell Rep Med	10.1016/j.xcrm.2023.101205	2023
	Microbiome Profile in Patients with Adult Balanoposthitis: Relationship with Redundant Prepuce, Genital Mucosa Physical Barrier Status and Inflammation.	Li M, Mao JX, Jiang HH, Huang CM, Gao XH, Zhang L.	Acta Derm Venereol	10.2340/00015555-3833	2021
	Alterations and Prediction of Functional Profiles of Gut Microbiota After Fecal Microbiota Transplantation for Iranian Recurrent Clostridioides difficile Infection with Underlying Inflammatory Bowel Disease: A Pilot Study.	Azimirad M, Jo Y, Kim MS, Jeong M, Shahrokh S, Asadzadeh Aghdaei H, Zali MR, Lee S, Yadegar A, Shin JH.	J Inflamm Res	10.2147/jir.s338212	2022
	Molecular Regulatory Mechanisms Drive Emergent Pathogenetic Properties of Neisseria gonorrhoeae.	Sunkavalli A, McClure R, Genco C.	Microorganisms	10.3390/microorganisms10050922	2022
	BugSplit enables genome-resolved metagenomics through highly accurate taxonomic binning of metagenomic assemblies.	Chandrakumar I, Gauthier NPG, Nelson C, Bonsall MB, Locher K, Charles M, MacDonald C, Krajden M, Manges AR, Chorlton SD.	Commun Biol	10.1038/s42003-022-03114-4	2022
Phylogeny	Urinary Microbiome of Reproductive-Age Asymptomatic European Women.	Ugarcina Perovic S, Ksiezarek M, Rocha J, Cappelli EA, Sousa M, Ribeiro TG, Grosso F, Peixe L.	Microbiol Spectr	10.1128/spectrum.01308-22	2022
Phylogeny	Is There a Universal Endurance Microbiota?	Olbricht H, Twadell K, Sandel B, Stephens C, Whittall JB.	Microorganisms	10.3390/microorganisms10112213	2022
	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.	Hou MH, Wang YC, Yang CS, Liao KF, Chang JW, Shih O, Yeh YQ, Sriramoju MK, Weng TW, Jeng US, Hsu SD, Chen Y.	Nat Commun	10.1038/s41467-023-44052-x	2023
	Successful treatment following early recognition of a case of Fournier's scrotal gangrene after a perianal abscess debridement: a case report.	Chen Y, Wang X, Lin G, Xiao R.	J Med Case Rep	10.1186/s13256-018-1697-9	2018
	Azadirachta indica: A herbal panacea in dentistry - An update.	Lakshmi T, Krishnan V, Rajendran R, Madhusudhanan N.	Pharmacogn Rev	10.4103/0973-7847.156337	2015
	The Microbiome Composition of a Man's Penis Predicts Incident Bacterial Vaginosis in His Female Sex Partner With High Accuracy.	Mehta SD, Zhao D, Green SJ, Agingu W, Otieno F, Bhaumik R, Bhaumik D, Bailey RC.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00433	2020
Pathogenicity	Colonization of the Caenorhabditis elegans gut with human enteric bacterial pathogens leads to proteostasis disruption that is rescued by butyrate.	Walker AC, Bhargava R, Vaziriyan-Sani AS, Pourciau C, Donahue ET, Dove AS, Gebhardt MJ, Ellward GL, Romeo T, Czyz DM.	PLoS Pathog	10.1371/journal.ppat.1009510	2021
	Vaginal and rectal microbiome contribute to genital inflammation in chronic pelvic pain.	Jimenez N, Norton T, Diadala G, Bell E, Valenti M, Farland LV, Mahnert N, Herbst-Kralovetz MM.	BMC Med	10.1186/s12916-024-03500-1	2024
Genetics	Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.	Gand M, Navickaite I, Bartsch LJ, Grutzke J, Overballe-Petersen S, Rasmussen A, Otani S, Michelacci V, Matamoros BR, Gonzalez-Zorn B, Brouwer MSM, Di Marcantonio L, Bloemen B, Vanneste K, Roosens NHCJ, AbuOun M, De Keersmaecker SCJ.	Front Microbiol	10.3389/fmicb.2024.1336532	2024
	Rate of cultivable subgingival periodontopathogenic bacteria in chronic periodontitis.	Salari MH, Kadkhoda Z.	J Oral Sci	10.2334/josnusd.46.157	2004
Metabolism	The Alterations of Vaginal Microbiome in HPV16 Infection as Identified by Shotgun Metagenomic Sequencing.	Yang Q, Wang Y, Wei X, Zhu J, Wang X, Xie X, Lu W.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00286	2020
	Quantitative survival of aerobic and anaerobic microorganisms in Port-A-Cul and Copan transport systems.	Stoner KA, Rabe LK, Austin MN, Meyn LA, Hillier SL.	J Clin Microbiol	10.1128/jcm.00161-08	2008
	HIV-1 treatment timing shapes the human intestinal memory B-cell repertoire to commensal bacteria.	Planchais C, Molinos-Albert LM, Rosenbaum P, Hieu T, Kanyavuz A, Clermont D, Prazuck T, Lefrou L, Dimitrov JD, Hue S, Hocqueloux L, Mouquet H.	Nat Commun	10.1038/s41467-023-42027-6	2023
Phylogeny	SEPATH: benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines.	Gihawi A, Rallapalli G, Hurst R, Cooper CS, Leggett RM, Brewer DS.	Genome Biol	10.1186/s13059-019-1819-8	2019
	Genetic heterogeneity in Prevotella intermedia, Prevotella nigrescens, Prevotella corporis and related species isolated from oral and nonoral sites.	Pearce MA, Devine DA, Dixon RA, van Steenbergen TJ.	Oral Microbiol Immunol	10.1034/j.1399-302x.2000.150204.x	2000
Phylogeny	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies.	Ammer-Herrmenau C, Pfisterer N, van den Berg T, Gavrilova I, Amanzada A, Singh SK, Khalil A, Alili R, Belda E, Clement K, Abd El Wahed A, Gady EE, Haubrock M, Beissbarth T, Ellenrieder V, Neesse A.	mSystems	10.1128/msystems.00750-21	2021
	Phospholipid molecular species distribution of oral Prevotella corporis clinical isolates.	Tavana AM, Drucker DB, Hull PS, Boote V.	FEMS Immunol Med Microbiol	10.1111/j.1574-695x.1998.tb01149.x	1998
	Conservative management of placenta accreta in a multiparous woman.	Hunt JC, Hunt JC.	J Pregnancy	10.1155/2010/329618	2010
	Techniques for early diagnosis and management of cervicofacial necrotising fasciitis.	Lee JW, Immerman SB, Morris LG.	J Laryngol Otol	10.1017/s0022215110000514	2010
	Distinct maternal microbiota clusters are associated with diet during pregnancy: impact on neonatal microbiota and infant growth during the first 18 months of life.	Garcia-Mantrana I, Selma-Royo M, Gonzalez S, Parra-Llorca A, Martinez-Costa C, Collado MC.	Gut Microbes	10.1080/19490976.2020.1730294	2020
Enzymology	Purification and functional analysis of the DnaK homologue from Prevotella intermedia OMZ 326.	Kadri R, Devine D, Ashraf W.	FEMS Microbiol Lett	10.1111/j.1574-6968.1998.tb13208.x	1998
Phylogeny	Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers.	Dyrhovden R, Rippin M, Ovrebo KK, Nygaard RM, Ulvestad E, Kommedal O.	mBio	10.1128/mbio.00598-21	2021
	Microbial role in periodontitis: Have we reached the top? Some unsung bacteria other than red complex.	Arora N, Mishra A, Chugh S.	J Indian Soc Periodontol	10.4103/0972-124x.128192	2014
	Complications of peritonsillar abscess.	Klug TE, Greve T, Hentze M.	Ann Clin Microbiol Antimicrob	10.1186/s12941-020-00375-x	2020
Enzymology	The endodontic microflora revisited.	Drucker DB, Lilley JD, Tucker D, Gibbs AC.	Microbios		1992
Enzymology	Paronychia due to Prevotella bivia that resulted in amputation: fast and correct bacteriological diagnosis is crucial.	Riesbeck K.	J Clin Microbiol	10.1128/jcm.41.10.4901-4903.2003	2003
Enzymology	The normal vaginal flora, H2O2-producing lactobacilli, and bacterial vaginosis in pregnant women.	Hillier SL, Krohn MA, Rabe LK, Klebanoff SJ, Eschenbach DA.	Clin Infect Dis	10.1093/clinids/16.supplement_4.s273	1993
Phylogeny	The microfloral analysis of secondary caries biofilm around Class I and Class II composite and amalgam fillings.	Mo SS, Bao W, Lai GY, Wang J, Li MY.	BMC Infect Dis	10.1186/1471-2334-10-241	2010
Pathogenicity	Metronidazole resistance in Prevotella spp. and description of a new nim gene in Prevotella baroniae.	Alauzet C, Mory F, Teyssier C, Hallage H, Carlier JP, Grollier G, Lozniewski A.	Antimicrob Agents Chemother	10.1128/aac.01003-09	2010
Enzymology	Characterization of some actinomyces-like isolates from human clinical sources: description of Varibaculum cambriensis gen nov, sp nov.	Hall V, Collins MD, Lawson PA, Hutson RA, Falsen E, Inganas E, Duerden B.	J Clin Microbiol	10.1128/jcm.41.2.640-644.2003	2003
	Carious dentine provides a habitat for a complex array of novel Prevotella-like bacteria.	Nadkarni MA, Caldon CE, Chhour KL, Fisher IP, Martin FE, Jacques NA, Hunter N.	J Clin Microbiol	10.1128/jcm.42.11.5238-5244.2004	2004
Pathogenicity	Microbiologic response to treatment of bacterial vaginosis with topical clindamycin or metronidazole.	Austin MN, Beigi RH, Meyn LA, Hillier SL.	J Clin Microbiol	10.1128/jcm.43.9.4492-4497.2005	2005
Phylogeny	Use of PCR and sodium dodecyl sulfate-polyacrylamide gel electrophoresis techniques for differentiation of Prevotella intermedia sensu stricto and Prevotella nigrescens.	Premaraj T, Kato N, Fukui K, Kato H, Watanabe K.	J Clin Microbiol	10.1128/jcm.37.4.1057-1061.1999	1999
Phylogeny	Genome-Based Taxonomic Classification of Bacteroidetes.	Hahnke RL, Meier-Kolthoff JP, Garcia-Lopez M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Goker M.	Front Microbiol	10.3389/fmicb.2016.02003	2016
Enzymology	Quantitative microbiological study of human carious dentine by culture and real-time PCR: association of anaerobes with histopathological changes in chronic pulpitis.	Martin FE, Nadkarni MA, Jacques NA, Hunter N.	J Clin Microbiol	10.1128/jcm.40.5.1698-1704.2002	2002
Pathogenicity	An electron microscope survey of the surface structures and hydrophobicity of oral and non-oral species of the bacterial genus Bacteroides.	Handley PS, Tipler LS	Arch Oral Biol	10.1016/0003-9969(86)90047-6	1986
	Description of Prevotella rectalis sp. nov., a new bacterium isolated from human rectum.	Belkacemi S, Lo CI, Khelaifia S, Raoult D, Fournier PE, Fenollar F.	New Microbes New Infect	10.1016/j.nmni.2020.100703	2020
Phylogeny	Prevotella brunnea sp. nov., isolated from a wound of a patient.	Buhl M, Dunlap C, Marschal M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.003715	2019
Phylogeny	"Bacteroides nordii" sp. nov. and "Bacteroides salyersae" sp. nov. isolated from clinical specimens of human intestinal origin.	Song YL, Liu CX, McTeague M, Finegold SM.	J Clin Microbiol	10.1128/jcm.42.12.5565-5570.2004	2004
Phylogeny	"Bacteroides goldsteinii sp. nov." isolated from clinical specimens of human intestinal origin.	Song Y, Liu C, Lee J, Bolanos M, Vaisanen ML, Finegold SM.	J Clin Microbiol	10.1128/jcm.43.9.4522-4527.2005	2005

References

#7711	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18810
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39198	; Curators of the CIP;
#46244	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 15404
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68380	Automatically annotated from API rID32A .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#118753	Collection of Institut Pasteur ; Curators of the CIP; CIP 105107
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prevotella corporis (DSM 18810, ATCC 33547, CIP 105107)

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