Name: Prevotella nigrescens DSM 13386
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12537

Type strain:

Species: Prevotella nigrescens

Culture col. no.: DSM 13386, ATCC 33563, NCTC 9336, CCUG 9560, CIP 105552, JCM 12250, VPI 8944, Lambe 729-74, CIP 104835, JCM 6322, KCTC 15081

Strain history: CIP <- 2001, CCUG <- 1980, NCTC <- 1954, L.P. Garrod, London, UK

NCBI tax ID(s): 997352 (strain), 28133 (species)

SI-ID 40561

CCUG 9560, ATCC 33563, NCTC 9336, CIP 104835, JCM 6322, DSM 13386, CIP 105552, BCRC 14404, CCRC 14404, BCRC 14408, CCRC 14408, JCM 12250

Other strains from Prevotella nigrescens

P. nigrescens CCUG 9992, ATCC 25261
P. nigrescens CCUG 25222
P. nigrescens CCUG 25284
P. nigrescens CCUG 25288
P. nigrescens CCUG 25837
P. nigrescens CCUG 27728
P. nigrescens CCUG 27729

Section

Prevotella nigrescens DSM 13386 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from Vincent's gingivitis.

Gram-negative
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Prevotellaceae*
	Genus	*Prevotella*
	Species	**Prevotella nigrescens**
	Full Scientific Name (LPSN)	Prevotella nigrescens Shah and Gharbia 1992

Synonym

"Prevotella nigrescens"

Information on morphological and physiological properties Morphology

[Ref.: #121297]	Gram stain	negative

[Ref.: #121297]	Cell shape	rod-shaped

[Ref.: #121297]	Motility	no

[Ref.: #5019]	Incubation period	1-2 days

[Ref.: #45196]	Incubation period	2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5019]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #5019]

Culture medium growth

[Ref.: #5019]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5019]

Culture medium composition

expand / minimize

[Ref.: #5019]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #5019]

Culture medium growth

[Ref.: #5019]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5019]

Culture medium composition

expand / minimize

[Ref.: #39314]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #39314]

Culture medium growth

[Ref.: #39314]

Culture medium composition

expand / minimize

[Ref.: #5019]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5019]

Culture medium growth

[Ref.: #5019]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5019]

Culture medium composition

expand / minimize

[Ref.: #121297]

Culture medium

CIP Medium 20

[Ref.: #121297]

Culture medium growth

[Ref.: #121297]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #5019]	growth	37 °C
[Ref.: #39314]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #5019]	Temperature range	mesophilic
[Ref.: #39314]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5019]	Oxygen tolerance	anaerobe
[Ref.: #45196]	Oxygen tolerance	anaerobe
[Ref.: #121297]	Oxygen tolerance	anaerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #121297]	nitrate ChEBI	-	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #121297]	nitrite ChEBI	-	reduction
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #121297]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	+	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	+	3.1.3.1	* from API rID32A, API zym
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A, API zym
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A, API zym
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API zym
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A, API zym
[Ref.: #121297]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	+		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A, API zym
[Ref.: #68380]	leucyl glycin arylamidase	+	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121297]	oxidase	-
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121297]	urease	-	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #5019]	13236	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	+	+	-	+	+/-	-	-	+/-	+	+/-	+/-	+	-
[Ref.: #45196]	3732	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	+	+	+	-	+	-	-	-	-	+	-	-	+	-
[Ref.: #5019]	12170	-	+/-	not determinedn.d.	-	-	+	-	-	-	-	-	-	-	+	-	+	+	+/-	-	+	-	-	-	-	+	-	-	+	-
[Ref.: #5019]	12169	-	-	-	-	-	+	-	-	-	-	-	+/-	-	+	-	+/-	+	+	-	+	-	-	-	-	+	-	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121297]	8790	-	+	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	d-mannose degradation	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	NAD metabolism	88.89	16 of 18
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	gluconeogenesis	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	vitamin K metabolism	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	purine metabolism	72.34	68 of 94
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	pyrimidine metabolism	68.89	31 of 45
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	tetrahydrofolate metabolism	64.29	9 of 14
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	isoleucine metabolism	62.5	5 of 8
[Ref.: #66794]	glutamate and glutamine metabolism	60.71	17 of 28
[Ref.: #66794]	phenylacetate degradation (aerobic)	60	3 of 5
[Ref.: #66794]	hydrogen production	60	3 of 5
[Ref.: #66794]	threonine metabolism	60	6 of 10
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	CO2 fixation in Crenarchaeota	55.56	5 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	55.56	5 of 9
[Ref.: #66794]	alanine metabolism	51.72	15 of 29
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	adipate degradation	50	1 of 2
[Ref.: #66794]	myo-inositol biosynthesis	50	5 of 10
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	ketogluconate metabolism	50	4 of 8
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	phenylalanine metabolism	46.15	6 of 13
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	lipid metabolism	45.16	14 of 31
[Ref.: #66794]	histidine metabolism	44.83	13 of 29
[Ref.: #66794]	non-pathway related	44.74	17 of 38
[Ref.: #66794]	lysine metabolism	42.86	18 of 42
[Ref.: #66794]	tryptophan metabolism	42.11	16 of 38
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	oxidative phosphorylation	40.66	37 of 91
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	methylglyoxal degradation	40	2 of 5
[Ref.: #66794]	propionate fermentation	40	4 of 10
[Ref.: #66794]	polyamine pathway	39.13	9 of 23
[Ref.: #66794]	pentose phosphate pathway	36.36	4 of 11
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	citric acid cycle	35.71	5 of 14
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	methionine metabolism	34.62	9 of 26
[Ref.: #66794]	formaldehyde oxidation	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	33.33	2 of 6
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	L-lactaldehyde degradation	33.33	1 of 3
[Ref.: #66794]	valine metabolism	33.33	3 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	33.33	3 of 9
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	degradation of hexoses	33.33	6 of 18
[Ref.: #66794]	sulfate reduction	30.77	4 of 13
[Ref.: #66794]	leucine metabolism	30.77	4 of 13
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	Entner Doudoroff pathway	30	3 of 10
[Ref.: #66794]	reductive acetyl coenzyme A pathway	28.57	2 of 7
[Ref.: #66794]	glutathione metabolism	28.57	4 of 14
[Ref.: #66794]	d-xylose degradation	27.27	3 of 11
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	degradation of sugar alcohols	25	4 of 16
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	urea cycle	23.08	3 of 13
[Ref.: #66794]	cysteine metabolism	22.22	4 of 18
[Ref.: #66794]	arginine metabolism	20.83	5 of 24
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5019]	Sample type/isolated from	Vincent's gingivitis
[Ref.: #5019]	Continent	Europe

[Ref.: #45196]	Sample type/isolated from	Human gingivitis
[Ref.: #45196]	Geographic location (country and/or sea, region)	London
[Ref.: #45196]	Country	United Kingdom
[Ref.: #45196]	Country ISO 3 Code	GBR
[Ref.: #45196]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Human gingival crevice

[Ref.: #121297]	Sample type/isolated from	Human, Gingivitis
[Ref.: #121297]	Geographic location (country and/or sea, region)	London
[Ref.: #121297]	Country	United Kingdom
[Ref.: #121297]	Country ISO 3 Code	GBR
[Ref.: #121297]	Continent	Europe
[Ref.: #121297]	Isolation date	1954
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Host Body-Site	#Oral cavity and airways	#Gingiva

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X73963 (>99% sequence identity) for Prevotella nigrescens subclade from Microbeatlas

Aquatic Samples	1593
Soil Samples	1204
Animal Samples	72425
Plant Samples	518
Total Samples	75740

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5019]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121297]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 6322	AB547697	1480	ENA	28133 tax ID
[Ref.: #5019]	Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 12250	AB547696	1280	ENA	997352 tax ID
[Ref.: #20218]	P.nigrescens gene for 16S rRNA	X73963	1453	ENA	997352 tax ID	*
[Ref.: #20218]	Prevotella nigrescens ATCC 33563 16S ribosomal RNA gene, complete sequence	L16471	1471	ENA	28133 tax ID	*
[Ref.: #20218]	Prevotella nigrescens strain ATCC 33563 16S ribosomal RNA gene, partial sequence	AF414833	1363	ENA	997352 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Prevotella nigrescens strain FDAARGOS_1486	28133.95	complete	PATRIC	28133 tax ID	*
[Ref.: #66792]	Prevotella nigrescens ATCC 33563	GCA_000220235	scaffold	GenBank	997352 tax ID	*
[Ref.: #66792]	Prevotella nigrescens ATCC 33563	997352.4	wgs	PATRIC	997352 tax ID	*
[Ref.: #66792]	Prevotella nigrescens strain FDAARGOS_1486	28133.93	complete	PATRIC	28133 tax ID	*
[Ref.: #66792]	Prevotella nigrescens strain NCTC9336	28133.4	wgs	PATRIC	28133 tax ID	*
[Ref.: #66792]	Prevotella nigrescens NCTC 9336	2811995243	draft	JGI IMG/M	28133 tax ID	*

[Ref.: #5019]	GC-content	42.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #5019]	GC-content	42.6 mol%	sequence analysis
[Ref.: #67770]	GC-content	42.5 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prevotella nigrescens strain FDAARGOS_1486 strain Not applicable PATRIC: 28133.93
[Ref.: #69480]	motile	no	92.805	no
[Ref.: #69480]	gram-positive	no	97.25	no
[Ref.: #69480]	anaerobic	yes	98.989	yes
[Ref.: #69480]	halophile	no	83.491	no
[Ref.: #69480]	spore-forming	no	95.76	no
[Ref.: #69480]	glucose-util	yes	81.234	no
[Ref.: #69480]	flagellated	no	97.181	no
[Ref.: #69480]	aerobic	no	98.459	yes
[Ref.: #69480]	thermophile	no	96.977	yes
[Ref.: #69480]	glucose-ferment	yes	53.991	no

Availability in culture collections External links

[Ref.: #5019]

Culture collection no.

DSM 13386, ATCC 33563, NCTC 9336, CCUG 9560, CIP 105552, JCM 12250, VPI 8944, Lambe 729-74, CIP 104835, JCM 6322, KCTC 15081

[Ref.: #81754]

SI-ID 40561

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Pathogenicity	Quorum sensing molecules regulate epithelial cytokine response and biofilm-related virulence of three Prevotella species.	Fteita D, Kononen E, Gursoy M, Ma X, Sintim HO, Gursoy UK	Anaerobe	10.1016/j.anaerobe.2018.09.001	2018	*
Pathogenicity	Mikania glomerata Sprengel extract and its major compound ent-kaurenoic acid display activity against bacteria present in endodontic infections.	Moreti DLC, Leandro LF, da Silva Moraes T, Moreira MR, Sola Veneziani RC, Ambrosio SR, Gomes BP, Martins CHG	Anaerobe	10.1016/j.anaerobe.2017.06.008	2017	*
Enzymology	Copaifera reticulata oleoresin: Chemical characterization and antibacterial properties against oral pathogens.	Bardaji DK, da Silva JJ, Bianchi TC, de Souza Eugenio D, de Oliveira PF, Leandro LF, Rogez HL, Venezianni RC, Ambrosio SR, Tavares DC, Bastos JK, Martins CH	Anaerobe	10.1016/j.anaerobe.2016.04.017	2016	*
Pathogenicity	Intraspecies Variability Affects Heterotypic Biofilms of Porphyromonas gingivalis and Prevotella intermedia: Evidences of Strain-Dependence Biofilm Modulation by Physical Contact and by Released Soluble Factors.	Barbosa GM, Colombo AV, Rodrigues PH, Simionato MR	PLoS One	10.1371/journal.pone.0138687	2015	*
Pathogenicity	Effect of estradiol on planktonic growth, coaggregation, and biofilm formation of the Prevotella intermedia group bacteria.	Fteita D, Kononen E, Soderling E, Gursoy UK	Anaerobe	10.1016/j.anaerobe.2014.02.003	2014	*
Pathogenicity	Development of Prevotella nigrescens-specific PCR primers based on the nucleotide sequence of a Pn23 DNA probe.	Kim MJ, Lee YS, Park JY, Kook JK	Anaerobe	10.1016/j.anaerobe.2010.12.005	2010	*
Phylogeny	Prevotella aurantiaca sp. nov., isolated from the human oral cavity.	Sakamoto M, Suzuki N, Okamoto M	Int J Syst Evol Microbiol	10.1099/ijs.0.012831-0	2009	*
Phylogeny	Prevotella falsenii sp. nov., a Prevotella intermedia-like organism isolated from monkey dental plaque.	Sakamoto M, Kumada H, Hamada N, Takahashi Y, Okamoto M, Bakir MA, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.002626-0	2009	*
Metabolism	In vitro activation of the hemolysin in Prevotella nigrescens ATCC 33563 and Prevotella intermedia ATCC 25611.	Silva TA, Noronha FS, de Macedo Farias L, Carvalho MA	Res Microbiol	10.1016/j.resmic.2003.09.010	2004	*
Pathogenicity	Activity of endodontic antibacterial agents against selected anaerobic bacteria.	Ferreira CM, da Silva Rosa OP, Torres SA, Ferreira FB, Bernardinelli N	Braz Dent J	10.1590/s0103-64402002000200008	2002	*
Pathogenicity	Scanning electron microscopy study of the adhesion of Prevotella nigrescens to the dentin of prepared root canals.	Yang SE, Bae KS	J Endod	10.1097/00004770-200206000-00004	2002	*
Pathogenicity	In vitro effect of intracanal medicaments on strict anaerobes by means of the broth dilution method.	Rosa OP, Torres SA, Ferreira CM, Ferreira FB	Pesqui Odontol Bras	10.1590/s1517-74912002000100006	2002	*
Phylogeny	Survey for collagenase gene prtC in Porphyromonas gingivalis and Porphyromonas endodontalis isolated from endodontic infections.	Odell LJ, Baumgartner JC, Xia T, David LL	J Endod	10.1016/S0099-2399(99)80379-3	1999	*
Phylogeny	Use of PCR and sodium dodecyl sulfate-polyacrylamide gel electrophoresis techniques for differentiation of Prevotella intermedia sensu stricto and Prevotella nigrescens.	Premaraj T, Kato N, Fukui K, Kato H, Watanabe K	J Clin Microbiol	10.1128/JCM.37.4.1057-1061.1999	1999	*
Pathogenicity	In vitro adhesion of two strains of Prevotella nigrescens to the dentin of the root canal: the part played by different irrigation solutions.	Calas P, Rochd T, Druilhet P, Azais JM	J Endod	10.1016/S0099-2399(98)80088-5	1998	*
Phylogeny	Biochemical and genetic characterization of a Prevotella intermedia/nigrescens-like organism.	Kononen E, Matto J, Vaisanen-Tunkelrott ML, Frandsen EV, Helander I, Asikainen S, Finegold SM, Jousimies-Somer H	Int J Syst Bacteriol	10.1099/00207713-48-1-39	1998	*
Metabolism	Fermentation product analysis in the identification of black-pigmented bacteria from periodontitis.	Takada K, Hirasawa M	Microbios		1997	*
Metabolism	Hydrolytic and depolymerising enzyme activity of Prevotella intermedia and Prevotella nigrescens.	Stubbs S, Lewis MA, Waddington RJ, Embery G	Oral Dis	10.1111/j.1601-0825.1996.tb00237.x	1996	*
Metabolism	Characterization of immunoglobulin G-degrading proteases of Prevotella intermedia and Prevotella nigrescens.	Jansen HJ, Grenier D, Van der Hoeven JS	Oral Microbiol Immunol	10.1111/j.1399-302x.1995.tb00134.x	1995	*
Phylogeny	Biochemical and chemical studies on strains designated Prevotella intermedia and proposal of a new pigmented species, Prevotella nigrescens sp. nov.	Shah HN, Gharbia SE	Int J Syst Bacteriol	10.1099/00207713-42-4-542	1992	*
	Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria.	Satokata AAC, Souza JH, Silva LLO, Santiago MB, Ramos SB, Assis LR, Theodoro RDS, Oliveira LRE, Regasini LO, Martins CHG	Anaerobe	10.1016/j.anaerobe.2022.102588	2022	*
	Bacterial concentrations determine the ability to implant in the root canal system and translocate to lymph nodes in germ-free mice.	de Melo Maltos SM, Ribeiro Sobrinho AP, Silva FV, Nicoli JR, Roque de Carvalho MA, Vieira LQ, de Macedo Farias L	J Endod	10.1097/00004770-200301000-00007	2003	*

References

#5019

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13386

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39314 ; Curators of the CIP;
#45196 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 9560

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#81754

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID40561.1 )

#121297 Collection of Institut Pasteur ; Curators of the CIP; CIP 105552
* These data were automatically processed and therefore are not curated

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