Prevotella nigrescens (DSM 13386, ATCC 33563, NCTC 9336)

Name: Prevotella nigrescens (DSM 13386, ATCC 33563, NCTC 9336)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12537

Type strain

Culture col. no. DSM 13386 ATCC 33563 NCTC 9336 CCUG 9560 CIP 105552 6 more

NCBI tax ID(s) 997352 28133

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- ATCC; ATCC 33563 <- VPI; VPI 8944 (Bacteroides intermedius) <- NCTC; NCTC 9336 <- M. E. Sharpe; <- L.P. Garrod; Lambe 729-74 JCM <-- CCUG 9560 <-- NCTC 9336 <-- L. P. Garrod. JCM <-- Y. Benno <-- T. Mitsuoka <-- NCTC 9336 <-- L. P. Garrod. CIP <- 2001, CCUG <- 1980, NCTC <- 1954, L.P. Garrod, London, UK

Links

Prevotella nigrescens DSM 13386 is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from Vincent's gingivitis.

Gram-negative rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 40561

ATCC 33563,NCTC 9336,CCUG 9560,CIP 104835,JCM 6322,DSM 13386,CIP 105552,BCRC 14404,CCRC 14404,BCRC 14408,CCRC 14408,JCM 12250

@ref 20215

Last LPSN update 2026-05-29 08:27:49

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella nigrescens

Full scientific name Prevotella nigrescens Shah and Gharbia 1992

Synonyms (1)

"Prevotella nigrescens"

BacDive ID	Other strains from **Prevotella nigrescens** (7)	Type strain
142022	P. nigrescens CCUG 9992, ATCC 25261
144482	P. nigrescens CCUG 25222
144489	P. nigrescens CCUG 25284
144491	P. nigrescens CCUG 25288
144588	P. nigrescens CCUG 25837
145134	P. nigrescens CCUG 27728
145135	P. nigrescens CCUG 27729

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121297	negative	rod-shaped
125438			92.5
125438	negative		94.676
125439	negative		99.049

Colony morphology

@ref	Incubation period
5019	1-2 days
45196	2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5019	CHOPPED MEAT MEDIUM (DSMZ Medium 78)	Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM (DSMZ Medium 78) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l Ethanol 9.5 g/l (optional) K2HPO4 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl 0.5 g/l Haemin 0.005 g/l (optional) Resazurin 0.001 g/l Vitamin K3 0.0005 g/l (optional) Vitamin K1 (optional) NaOH (optional) Distilled water
5019	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
39314	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
5019	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
121297	CIP Medium 20	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5019	positive	growth	37
39314	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
5019	anaerobe
45196	anaerobe
121297	anaerobe
125438	anaerobe	93.099

Spore formation

@ref	Spore formation	Confidence
125439		99.899
125438		92.472

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
121297	17632 ChEBI	nitrate	-	reduction
121297	16301 ChEBI	nitrite	-	reduction
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121297	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
121297	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	+		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121297	oxidase	-
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
121297	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	glycogen metabolism	100	5 of 5
66794	palmitate biosynthesis	100	22 of 22
66794	teichoic acid biosynthesis	100	1 of 1
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	starch degradation	90	9 of 10
66794	d-mannose degradation	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	NAD metabolism	88.89	16 of 18
66794	lipid A biosynthesis	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	vitamin K metabolism	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	flavin biosynthesis	80	12 of 15
66794	serine metabolism	77.78	7 of 9
66794	vitamin B1 metabolism	76.92	10 of 13
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	ppGpp biosynthesis	75	3 of 4
66794	purine metabolism	72.34	68 of 94
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	pyrimidine metabolism	68.89	31 of 45
66794	acetoin degradation	66.67	2 of 3
66794	glycolysis	64.71	11 of 17
66794	tetrahydrofolate metabolism	64.29	9 of 14
66794	vitamin B6 metabolism	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	isoleucine metabolism	62.5	5 of 8
66794	glutamate and glutamine metabolism	60.71	17 of 28
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	threonine metabolism	60	6 of 10
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	CO2 fixation in Crenarchaeota	55.56	5 of 9
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	alanine metabolism	51.72	15 of 29
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	adipate degradation	50	1 of 2
66794	myo-inositol biosynthesis	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	ketogluconate metabolism	50	4 of 8
66794	butanoate fermentation	50	2 of 4
66794	phenylalanine metabolism	46.15	6 of 13
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	lipid metabolism	45.16	14 of 31
66794	histidine metabolism	44.83	13 of 29
66794	non-pathway related	44.74	17 of 38
66794	lysine metabolism	42.86	18 of 42
66794	tryptophan metabolism	42.11	16 of 38
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	oxidative phosphorylation	40.66	37 of 91
66794	lipoate biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	O-antigen biosynthesis	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	methylglyoxal degradation	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	polyamine pathway	39.13	9 of 23
66794	pentose phosphate pathway	36.36	4 of 11
66794	metabolism of disaccharids	36.36	4 of 11
66794	citric acid cycle	35.71	5 of 14
66794	tyrosine metabolism	35.71	5 of 14
66794	methionine metabolism	34.62	9 of 26
66794	formaldehyde oxidation	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	L-lactaldehyde degradation	33.33	1 of 3
66794	valine metabolism	33.33	3 of 9
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	degradation of hexoses	33.33	6 of 18
66794	sulfate reduction	30.77	4 of 13
66794	leucine metabolism	30.77	4 of 13
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	Entner Doudoroff pathway	30	3 of 10
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	glutathione metabolism	28.57	4 of 14
66794	d-xylose degradation	27.27	3 of 11
66794	biotin biosynthesis	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	degradation of sugar alcohols	25	4 of 16
66794	toluene degradation	25	1 of 4
66794	urea cycle	23.08	3 of 13
66794	cysteine metabolism	22.22	4 of 18
66794	arginine metabolism	20.83	5 of 24

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121297	-	+	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
5019	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	+	+	-	+	+/-	-	-	+/-	+	+/-	+/-	+	-
45196	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	+	+	+	-	+	-	-	-	-	+	-	-	+	-
5019	-	+/-	not determinedn.d.	-	-	+	-	-	-	-	-	-	-	+	-	+	+	+/-	-	+	-	-	-	-	+	-	-	+	-
5019	-	-	-	-	-	+	-	-	-	-	-	+/-	-	+	-	+/-	+	+	-	+	-	-	-	-	+	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Host Body-Site	#Oral cavity and airways	#Gingiva

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5019	Vincent's gingivitis					Europe
45196	Human gingivitis	Homo sapiens	London	United Kingdom	GBR	Europe
67770	Human gingival crevice	Homo sapiens
121297	Human, Gingivitis	Homo sapiens	London	United Kingdom	GBR	Europe	1954

Taxonmaps

69479

Global distribution of 16S sequence X73963 (>99% sequence identity) for Prevotella nigrescens subclade from Microbeatlas

Aquatic Samples	1593
Soil Samples	1204
Animal Samples	72425
Plant Samples	518
Total Samples	75740

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5019	2	Risk group (German classification) According to TRBA 466
121297	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Prevotella nigrescens strain FDAARGOS_1486	complete		28133.93		28133	99.6
66792	Prevotella nigrescens strain FDAARGOS_1486	complete		28133.99		28133	99.6
66792	Prevotella nigrescens strain FDAARGOS_1486	complete		28133.95		28133	99.6
124043	ASM1993060v1 assembly for Prevotella nigrescens FDAARGOS_1486	complete	GCA_019930605	28133.103		28133	99.25
124043	ASM3119118v1 assembly for Prevotella nigrescens DSM 13386	complete	GCA_031191185	28133.118	8116915521	28133	98.49
66792	53750_E01 assembly for Prevotella nigrescens NCTC9336	contig	GCA_900454985	28133.4	2811995243	28133	76.24
66792	ASM22023v1 assembly for Prevotella nigrescens ATCC 33563	scaffold	GCA_000220235	997352.4	651324089	997352	62.38

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Prevotella nigrescens strain ATCC 33563 16S ribosomal RNA gene, partial sequence	AF414833	1363	997352
20218	Prevotella nigrescens ATCC 33563 16S ribosomal RNA gene, complete sequence	L16471	1471	28133
20218	P.nigrescens gene for 16S rRNA	X73963	1453	997352
5019	Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 12250	AB547696	1280	997352
67770	Prevotella nigrescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 6322	AB547697	1480	28133

GC content

@ref	GC-content (mol%)	Method
5019	42.5	thermal denaturation, midpoint method (Tm)
5019	42.6	sequence analysis
67770	42.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Prevotella nigrescens strain FDAARGOS_1486
BV-BRC: 28133.95

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	99.05	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	56.73	no
125439	motility	BacteriaNetⓘ	no	83.04	no
125439	spore_formation	BacteriaNetⓘ	no	99.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotella nigrescens strain FDAARGOS_1486 strain Not applicable
PATRIC: 28133.93

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	94.68	no
125438	anaerobic	anaerobicⓘ	yes	93.10	yes
125438	spore-forming	spore-formingⓘ	no	92.47	no
125438	thermophilic	thermophileⓘ	no	96.53	no
125438	aerobic	aerobicⓘ	no	97.65	no
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Activity of five antimicrobial peptides against periodontal as well as non-periodontal pathogenic strains.	Enigk K, Jentsch H, Rodloff AC, Eschrich K, Stingu CS.	J Oral Microbiol	10.1080/20002297.2020.1829405	2020
	Functional characterization of the mys genes for porphyra-334 biosynthesis from the terrestrial cyanobacterium Nostoc commune by heterologous expression.	Yang W, Sakamoto T.	J Gen Appl Microbiol	10.2323/jgam.2025.05.002	2025
	Associations Between Oral Microbiota Pathogens and Elevated Depressive and Anxiety Symptoms in Men.	Kerff F, Pasco JA, Williams LJ, Jacka FN, Loughman A, Dawson SL.	Depress Anxiety	10.1155/da/9961595	2025
	Presence of zoonotic black-pigmented periodontal pathogens in the oral microbiota of pet and stray cats.	Ozavci V, Dolgun HTY, Kirkan S.	Vet Med (Praha)	10.17221/59/2022-vetmed	2023
	Multimodal inhibitory effect of matcha on Porphyromonas gingivalis.	Nakao R, Takatsuka A, Mandokoro K, Narisawa N, Ikeda T, Takai H, Ogata Y.	Microbiol Spectr	10.1128/spectrum.03426-23	2024
	Antibacterial, Antiparasitic, and Cytotoxic Activities of Chemical Characterized Essential Oil of Chrysopogon zizanioides Roots.	Oliveira TAS, Vieira TM, Esperandim VR, Martins CHG, Magalhaes LG, Miranda MLD, Crotti AEM.	Pharmaceuticals (Basel)	10.3390/ph15080967	2022
	A Chromosome-Level Genome Assembly for Yamadazyma tenuis ATCC 10573.	Hoyer LL, Hogan EK, Oh SH, Freeman BA, Walden KKO, Hernandez AG.	Microbiol Resour Announc	10.1128/mra.00213-23	2023
Metabolism	TLR2 and the NLRP3 inflammasome mediate IL-1beta production in Prevotella nigrescens-infected dendritic cells.	Jang HM, Park JY, Lee YJ, Kang MJ, Jo SG, Jeong YJ, Cho NP, Cho SD, Kim DJ, Park JH.	Int J Med Sci	10.7150/ijms.47197	2021
	Spontaneous Aberrant Bodies Formation in Human Pneumocytes Infected with Estrella lausannensis.	Rovero A, Kebbi-Beghdadi C, Greub G.	Microorganisms	10.3390/microorganisms11102368	2023
	Antimicrobial and Antibiofilm Effect of Brazilian Green Propolis Aqueous Extract against Dental Anaerobic Bacteria.	de Sa Assis MA, de Paula Ramos L, Abu Hasna A, de Queiroz TS, Pereira TC, Nagai de Lima PM, Berretta AA, Marcucci MC, Talge Carvalho CA, de Oliveira LD.	Molecules	10.3390/molecules27238128	2022
	Oral Microbiota in Children with Cleft Lip and Palate: A Systematic Review.	Switala J, Sycinska-Dziarnowska M, Spagnuolo G, Wozniak K, Mankowska K, Szyszka-Sommerfeld L.	J Clin Med	10.3390/jcm12185867	2023
	In vitro Characterization of Biofilm Formation in Prevotella Species.	Albaghdadi SZ, Altaher JB, Drobiova H, Bhardwaj RG, Karched M.	Front Oral Health	10.3389/froh.2021.724194	2021
Genetics	Population-Genomic Insights into Variation in Prevotella intermedia and Prevotella nigrescens Isolates and Its Association with Periodontal Disease.	Zhang Y, Zhen M, Zhan Y, Song Y, Zhang Q, Wang J.	Front Cell Infect Microbiol	10.3389/fcimb.2017.00409	2017
	Endodontic-Like Oral Biofilms as Models for Multispecies Interactions in Endodontic Diseases.	Lukic D, Karygianni L, Flury M, Attin T, Thurnheer T.	Microorganisms	10.3390/microorganisms8050674	2020
	Natural Compounds in the Battle against Microorganisms-Linalool.	Maczka W, Duda-Madej A, Grabarczyk M, Winska K.	Molecules	10.3390/molecules27206928	2022
	Oral Microbiota-Driven Cell Migration in Carcinogenesis and Metastasis.	Bai H, Yang J, Meng S, Liu C.	Front Cell Infect Microbiol	10.3389/fcimb.2022.864479	2022
	Dual Inhibitory Activity of Petroselinic Acid Enriched in Fennel Against Porphyromonas gingivalis.	Yoshino N, Ikeda T, Nakao R.	Front Microbiol	10.3389/fmicb.2022.816047	2022
	The antimicrobial effect of Limosilactobacillus reuteri as probiotic on oral bacteria: A scoping review.	Ananda N, Suniarti DF, Bachtiar EW.	F1000Res	10.12688/f1000research.139697.2	2023
Genetics	Draft genome sequence of the oomycete Pythium destruens strain ATCC 64221 from a horse with pythiosis in Australia.	Krajaejun T, Kittichotirat W, Patumcharoenpol P, Rujirawat T, Lohnoo T, Yingyong W.	BMC Res Notes	10.1186/s13104-020-05168-1	2020
	Hidden noise in immunologic parameters might explain rapid progression in early-onset periodontitis.	Papantonopoulos G, Delatola C, Takahashi K, Laine ML, Loos BG.	PLoS One	10.1371/journal.pone.0224615	2019
	Exploring the Antimicrobial Properties of 99 Natural Flavour and Fragrance Raw Materials against Pathogenic Bacteria: A Comparative Study with Antibiotics.	Bacinska Z, Baberowska K, Surowiak AK, Balcerzak L, Strub DJ.	Plants (Basel)	10.3390/plants12213777	2023
	Localization and density of Porphyromonas gingivalis and Tannerella forsythia in gingival and subgingival granulation tissues affected by chronic or aggressive periodontitis.	Rajakaruna GA, Negi M, Uchida K, Sekine M, Furukawa A, Ito T, Kobayashi D, Suzuki Y, Akashi T, Umeda M, Meinzer W, Izumi Y, Eishi Y.	Sci Rep	10.1038/s41598-018-27766-7	2018
	Orthodontic bonding procedures significantly influence biofilm composition.	Jeon DM, An JS, Lim BS, Ahn SJ.	Prog Orthod	10.1186/s40510-020-00314-8	2020
Genetics	Genomic Insights into the Distribution of Peptidases and Proteolytic Capacity among Prevotella and Paraprevotella Species.	Patra AK, Yu Z.	Microbiol Spectr	10.1128/spectrum.02185-21	2022
	Curry Leaf Triggers Cell Death of P. gingivalis with Membrane Blebbing.	Nakao R, Ikeda T, Furukawa S, Morinaga Y.	Pathogens	10.3390/pathogens10101286	2021
	Effect of Blueberry Supplementation on a Diet-Induced Rat Model of Prediabetes-Focus on Hepatic Lipid Deposition, Endoplasmic Stress Response and Autophagy.	Ferreira G, Vieira P, Alves A, Nunes S, Preguica I, Martins-Marques T, Ribeiro T, Girao H, Figueirinha A, Salgueiro L, Pintado M, Gomes P, Viana S, Reis F.	Nutrients	10.3390/nu16040513	2024
	Chemical Constituents and Evaluation of Antimicrobial and Cytotoxic Activities of Kielmeyera coriacea Mart. & Zucc. Essential Oils.	Martins Cde M, do Nascimento EA, de Morais SA, de Oliveira A, Chang R, Cunha LC, Martins MM, Martins CH, Moraes Tda S, Rodrigues PV, da Silva CV, de Aquino FJ.	Evid Based Complement Alternat Med	10.1155/2015/842047	2015
Pathogenicity	Antimicrobial and cytotoxic effects of phosphoric acid solution compared to other root canal irrigants.	Prado M, Silva EJ, Duque TM, Zaia AA, Ferraz CC, Almeida JF, Gomes BP.	J Appl Oral Sci	10.1590/1678-775720130691	2015
Enzymology	Bacteriological analysis of necrotic pulp and fistulae in primary teeth.	Fabris AS, Nakano V, Avila-Campos MJ.	J Appl Oral Sci	10.1590/1678-775720130358	2014
	Toxicological Effects of Copaiba Oil (Copaifera spp.) and Its Active Components.	Cardinelli CC, Silva JEAE, Ribeiro R, Veiga-Junior VF, Santos EPD, de Freitas ZMF.	Plants (Basel)	10.3390/plants12051054	2023
	Characterization of minimal bacteriocin operon from Prevotella nigrescens ATCC 25261.	Kaewsrichan J, Douglas CW, Teanpaisan R.	Lett Appl Microbiol	10.1111/j.1472-765x.2004.01639.x	2005
Transcriptome	Gene expression of bacterial collagenolytic proteases in root caries.	Dame-Teixeira N, Parolo CCF, Maltz M, Rup AG, Devine DA, Do T.	J Oral Microbiol	10.1080/20002297.2018.1424475	2018
	The influence of oral bacteria on epithelial cell migration in vitro.	Laheij AM, de Soet JJ, Veerman EC, Bolscher JG, van Loveren C.	Mediators Inflamm	10.1155/2013/154532	2013
	Ozone ultrafine bubble water exhibits bactericidal activity against pathogenic bacteria in the oral cavity and upper airway and disinfects contaminated healthcare equipment.	Takizawa F, Domon H, Hiyoshi T, Tamura H, Shimizu K, Maekawa T, Tabeta K, Ushida A, Terao Y.	PLoS One	10.1371/journal.pone.0284115	2023
Metabolism	Characterization of a bacteriocin produced by Prevotella nigrescens ATCC 25261.	Kaewsrichan J, Douglas CW, Nissen-Meyer J, Fimland G, Teanpaisan R.	Lett Appl Microbiol	10.1111/j.1472-765x.2004.01608.x	2004
Metabolism	Intra-Genomic Heterogeneity in 16S rRNA Genes in Strictly Anaerobic Clinical Isolates from Periodontal Abscesses.	Chen J, Miao X, Xu M, He J, Xie Y, Wu X, Chen G, Yu L, Zhang W.	PLoS One	10.1371/journal.pone.0130265	2015
	Antibacterial Effect of Copaifera duckei Dwyer Oleoresin and Its Main Diterpenes against Oral Pathogens and Their Cytotoxic Effect.	Abrao F, Alves JA, Andrade G, de Oliveira PF, Ambrosio SR, Veneziani RCS, Tavares DC, Bastos JK, Martins CHG.	Front Microbiol	10.3389/fmicb.2018.00201	2018
Pathogenicity	Genetic analysis of mobile tetQ elements in oral Prevotella species.	Tribble GD, Garza JJ, Yeung VL, Rigney TW, Dao DH, Rodrigues PH, Walker CB, Smith CJ.	Anaerobe	10.1016/j.anaerobe.2010.08.008	2010
	Evaluation of antimicrobial activity of extracts of Tibouchina candolleana (melastomataceae), isolated compounds and semi-synthetic derivatives against endodontic bacteria.	Dos Santos FM, de Souza MG, Crotti AE, Martins CH, Ambrosio SR, Veneziani RC, E Silva ML, Cunha WR.	Braz J Microbiol	10.1590/s1517-83822012000200045	2012
	Microbial Etiology and Prevention of Dental Caries: Exploiting Natural Products to Inhibit Cariogenic Biofilms.	Chen X, Daliri EB, Kim N, Kim JR, Yoo D, Oh DH.	Pathogens	10.3390/pathogens9070569	2020
Enzymology	Potassium is a key signal in host-microbiome dysbiosis in periodontitis.	Yost S, Duran-Pinedo AE, Krishnan K, Frias-Lopez J.	PLoS Pathog	10.1371/journal.ppat.1006457	2017
	Associations between Periodontal Microbiota and Death Rates.	Chiu CJ, Chang ML, Taylor A.	Sci Rep	10.1038/srep35428	2016
Pathogenicity	Inhibitory effect of lactoferrin on the adhesion of Prevotella nigrescens ATCC 25261 to hydroxyapatite.	Hirano Y, Tamura M, Hayashi K.	J Oral Sci	10.2334/josnusd.42.125	2000
	Estimation of bacterial hydrogen sulfide production in vitro.	Basic A, Blomqvist S, Carlen A, Dahlen G.	J Oral Microbiol	10.3402/jom.v7.28166	2015
	Evaluation of microbiota associated with Herpesviruses in active sites of generalized aggressive periodontitis.	Passariello C, Gigola P, Testarelli L, Puttini M, Schippa S, Petti S.	Ann Stomatol (Roma)	10.11138/ads/2017.8.2.071	2017
	Chemical Analysis and Study of Phenolics, Antioxidant Activity, and Antibacterial Effect of the Wood and Bark of Maclura tinctoria (L.) D. Don ex Steud.	Lamounier KC, Cunha LC, de Morais SA, de Aquino FJ, Chang R, do Nascimento EA, de Souza MG, Martins CH, Cunha WR.	Evid Based Complement Alternat Med	10.1155/2012/451039	2012
Pathogenicity	Antimicrobial activity of diterpenes from Viguiera arenaria against endodontic bacteria.	Carvalho TC, Simao MR, Ambrosio SR, Furtado NA, Veneziani RC, Heleno VC, Da Costa FB, Gomes BP, Souza MG, Borges dos Reis E, Martins CH.	Molecules	10.3390/molecules160100543	2011
	Purification and Anti-pathogenic Properties of Immunoglobulin Concentrates from Porcine Blood.	Jung TH, Choi JH, Koh KC, Jeon WM, Han KS.	Korean J Food Sci Anim Resour	10.5851/kosfa.2017.37.5.743	2017
	Transferrin as a source of iron for Campylobacter rectus.	Grenier D, Tanabe S.	J Oral Microbiol	10.3402/jom.v3i0.5660	2011
	Multiomic features associated with mucosal healing and inflammation in paediatric Crohn's disease.	Taylor H, Serrano-Contreras JI, McDonald JAK, Epstein J, Fell JM, Seoane RC, Li JV, Marchesi JR, Hart AL.	Aliment Pharmacol Ther	10.1111/apt.16086	2020
Metabolism	Binding and utilization of human transferrin by Prevotella nigrescens.	Duchesne P, Grenier D, Mayrand D.	Infect Immun	10.1128/iai.67.2.576-580.1999	1999
Pathogenicity	Inhibitory effect of lactoperoxidase-generated hypothiocyanite upon black pigmented anaerobe growth.	Fadel M, Courtois P.	Int J Mol Med	10.3892/ijmm.8.1.59	2001
	Identification of new DNA-associated proteins from Waddlia chondrophila.	de Barsy M, Herrgott L, Martin V, Pillonel T, Viollier PH, Greub G.	Sci Rep	10.1038/s41598-019-40732-1	2019
Metabolism	A predation assay using amoebae to screen for virulence factors unearthed the first W. chondrophila inclusion membrane protein.	Kebbi-Beghdadi C, Pilloux L, Croxatto A, Tosetti N, Pillonel T, Greub G.	Sci Rep	10.1038/s41598-019-55511-1	2019
	Proteolytic Activities of Oral Bacteria on ProMMP-9 and the Effect of Synthetic Proteinase Inhibitors.	Jie Bao G, Kari K, Tervahartiala T, Sorsa T, Meurman JH.	Open Dent J	10.2174/1874210600802010096	2008
	Seasonal variation of the chemical composition and antimicrobial and cytotoxic activities of the essential oils from Inga laurina (Sw.) Willd.	Furtado FB, de Aquino FJ, Nascimento EA, de M Martins C, de Morais SA, Chang R, Cunha LC, Leandro LF, Martins CH, Martins MM, da Silva CV, Machado FC, de Oliveira A.	Molecules	10.3390/molecules19044560	2014
Metabolism	Lifestyle, dietary factors, and antibody levels to oral bacteria in cancer-free participants of a European cohort study.	Michaud DS, Izard J, Rubin Z, Johansson I, Weiderpass E, Tjonneland A, Olsen A, Overvad K, Boutron-Ruault MC, Clavel-Chapelon F, Dossus L, Kaaks R, Katzke VA, Boeing H, Foerster J, Trichopoulou A, Naska A, Ziara G, Vineis P, Grioni S, Palli D, Tumino R, Mattiello A, Peeters PH, Siersema PD, Barricarte A, Huerta JM, Molina-Montes E, Dorronsoro M, Quiros JR, Duell EJ, Ohlsson B, Jeppsson B, Johansson A, Lif P, Khaw KT, Wareham N, Travis RC, Key TJ, Freisling H, Duarte-Salles T, Stepien M, Riboli E, Bueno-de-Mesquita HB.	Cancer Causes Control	10.1007/s10552-013-0265-2	2013
Enzymology	Solobacterium moorei bacteremia: identification, antimicrobial susceptibility, and clinical characteristics.	Pedersen RM, Holt HM, Justesen US.	J Clin Microbiol	10.1128/jcm.02525-10	2011
Enzymology	Evaluation of universal probes and primer sets for assessing total bacterial load in clinical samples: general implications and practical use in endodontic antimicrobial therapy.	Horz HP, Vianna ME, Gomes BP, Conrads G.	J Clin Microbiol	10.1128/jcm.43.10.5332-5337.2005	2005
Pathogenicity	Eukaryotic Cell Permeabilisation to Identify New Putative Chlamydial Type III Secretion System Effectors Secreted within Host Cell Cytoplasm.	Kebbi-Beghdadi C, Pilloux L, Martin V, Greub G.	Microorganisms	10.3390/microorganisms8030361	2020
	Subgingival microbiota in adult Down syndrome periodontitis.	Khocht A, Yaskell T, Janal M, Turner BF, Rams TE, Haffajee AD, Socransky SS.	J Periodontal Res	10.1111/j.1600-0765.2011.01459.x	2012
Pathogenicity	Reprofiled anthelmintics abate hypervirulent stationary-phase Clostridium difficile.	Gooyit M, Janda KD.	Sci Rep	10.1038/srep33642	2016
Enzymology	Beta-lactamase production in Prevotella intermedia, Prevotella nigrescens, and Prevotella pallens genotypes and in vitro susceptibilities to selected antimicrobial agents.	Matto J, Asikainen S, Vaisanen ML, Von Troil-Linden B, Kononen E, Saarela M, Salminen K, Finegold SM, Jousimies-Somer H.	Antimicrob Agents Chemother	10.1128/aac.43.10.2383	1999
	Thiol Probes To Detect Electrophilic Natural Products Based on Their Mechanism of Action.	Castro-Falcon G, Hahn D, Reimer D, Hughes CC.	ACS Chem Biol	10.1021/acschembio.5b00924	2016
Pathogenicity	Effect of smokeless tobacco products on human oral bacteria growth and viability.	Liu M, Jin J, Pan H, Feng J, Cerniglia CE, Yang M, Chen H.	Anaerobe	10.1016/j.anaerobe.2016.10.006	2016
	Genome-wide association study of periodontal pathogen colonization.	Divaris K, Monda KL, North KE, Olshan AF, Lange EM, Moss K, Barros SP, Beck JD, Offenbacher S.	J Dent Res	10.1177/0022034512447951	2012
	Phototargeting oral black-pigmented bacteria.	Soukos NS, Som S, Abernethy AD, Ruggiero K, Dunham J, Lee C, Doukas AG, Goodson JM.	Antimicrob Agents Chemother	10.1128/aac.49.4.1391-1396.2005	2005
Pathogenicity	Antimicrobial evaluation of diterpenes from Copaifera langsdorffii oleoresin against periodontal anaerobic bacteria.	Souza AB, de Souza MG, Moreira MA, Moreira MR, Furtado NA, Martins CH, Bastos JK, dos Santos RA, Heleno VC, Ambrosio SR, Veneziani RC.	Molecules	10.3390/molecules16119611	2011
Pathogenicity	Mechanisms of reduced susceptibility and genotypic prediction of antibiotic resistance in Prevotella isolated from cystic fibrosis (CF) and non-CF patients.	Sherrard LJ, Schaible B, Graham KA, McGrath SJ, McIlreavey L, Hatch J, Wolfgang MC, Muhlebach MS, Gilpin DF, Schneiders T, Elborn JS, Tunney MM.	J Antimicrob Chemother	10.1093/jac/dku192	2014
	The vaginal microflora in relation to gingivitis.	Persson R, Hitti J, Verhelst R, Vaneechoutte M, Persson R, Hirschi R, Weibel M, Rothen M, Temmerman M, Paul K, Eschenbach D.	BMC Infect Dis	10.1186/1471-2334-9-6	2009
	Acanthamoeba and Dictyostelium Use Different Foraging Strategies.	Kuburich NA, Adhikari N, Hadwiger JA.	Protist	10.1016/j.protis.2016.08.006	2016
	Health-Associated Niche Inhabitants as Oral Probiotics: The Case of Streptococcus dentisani.	Lopez-Lopez A, Camelo-Castillo A, Ferrer MD, Simon-Soro A, Mira A.	Front Microbiol	10.3389/fmicb.2017.00379	2017
Enzymology	PCR-DNA probe assays for identification and detection of Prevotella intermedia sensu stricto and Prevotella nigrescens.	Guillot E, Mouton C.	J Clin Microbiol	10.1128/jcm.35.7.1876-1882.1997	1997
	Effects of azithromycin, metronidazole, amoxicillin, and metronidazole plus amoxicillin on an in vitro polymicrobial subgingival biofilm model.	Soares GM, Teles F, Starr JR, Feres M, Patel M, Martin L, Teles R.	Antimicrob Agents Chemother	10.1128/aac.04974-14	2015
Metabolism	In vitro rescue of genital strains of Chlamydia trachomatis from interferon-gamma and tryptophan depletion with indole-positive, but not indole-negative Prevotella spp.	Ziklo N, Huston WM, Taing K, Katouli M, Timms P.	BMC Microbiol	10.1186/s12866-016-0903-4	2016
	Artificial neural networks for the diagnosis of aggressive periodontitis trained by immunologic parameters.	Papantonopoulos G, Takahashi K, Bountis T, Loos BG.	PLoS One	10.1371/journal.pone.0089757	2014
	High-fat diet-induced obesity Rat model: a comparison between Wistar and Sprague-Dawley Rat.	Marques C, Meireles M, Norberto S, Leite J, Freitas J, Pestana D, Faria A, Calhau C.	Adipocyte	10.1080/21623945.2015.1061723	2016
Enzymology	Genetic basis for the biosynthesis of the pharmaceutically important class of epoxyketone proteasome inhibitors.	Schorn M, Zettler J, Noel JP, Dorrestein PC, Moore BS, Kaysser L.	ACS Chem Biol	10.1021/cb400699p	2014
	Method to quantify live and dead cells in multi-species oral biofilm by real-time PCR with propidium monoazide.	Alvarez G, Gonzalez M, Isabal S, Blanc V, Leon R.	AMB Express	10.1186/2191-0855-3-1	2013
	Prevotella intermedia stimulates expansion of Vbeta-specific CD4(+) T cells.	Leung KP, Torres BA.	Infect Immun	10.1128/iai.68.9.5420-5424.2000	2000
Enzymology	Detection and quantification of oral treponemes in subgingival plaque by real-time PCR.	Asai Y, Jinno T, Igarashi H, Ohyama Y, Ogawa T.	J Clin Microbiol	10.1128/jcm.40.9.3334-3340.2002	2002
	A Zebrafish Model for Chlamydia Infection with the Obligate Intracellular Pathogen Waddlia chondrophila.	Fehr AG, Ruetten M, Seth-Smith HM, Nufer L, Voegtlin A, Lehner A, Greub G, Crosier PS, Neuhauss SC, Vaughan L.	Front Microbiol	10.3389/fmicb.2016.01829	2016
Enzymology	Identification of immunogenic proteins of Waddlia chondrophila.	Kebbi-Beghdadi C, Lienard J, Uyttebroeck F, Baud D, Riederer BM, Greub G.	PLoS One	10.1371/journal.pone.0028605	2012
Pathogenicity	Resistance of Acanthamoeba cysts to disinfection treatments used in health care settings.	Coulon C, Collignon A, McDonnell G, Thomas V.	J Clin Microbiol	10.1128/jcm.00309-10	2010
	Plasma antibodies to oral bacteria and risk of pancreatic cancer in a large European prospective cohort study.	Michaud DS, Izard J, Wilhelm-Benartzi CS, You DH, Grote VA, Tjonneland A, Dahm CC, Overvad K, Jenab M, Fedirko V, Boutron-Ruault MC, Clavel-Chapelon F, Racine A, Kaaks R, Boeing H, Foerster J, Trichopoulou A, Lagiou P, Trichopoulos D, Sacerdote C, Sieri S, Palli D, Tumino R, Panico S, Siersema PD, Peeters PH, Lund E, Barricarte A, Huerta JM, Molina-Montes E, Dorronsoro M, Quiros JR, Duell EJ, Ye W, Sund M, Lindkvist B, Johansen D, Khaw KT, Wareham N, Travis RC, Vineis P, Bueno-de-Mesquita HB, Riboli E.	Gut	10.1136/gutjnl-2012-303006	2013
Metabolism	Inerolysin, a cholesterol-dependent cytolysin produced by Lactobacillus iners.	Rampersaud R, Planet PJ, Randis TM, Kulkarni R, Aguilar JL, Lehrer RI, Ratner AJ.	J Bacteriol	10.1128/jb.00694-10	2011
Metabolism	Functional importance for developmental regulation of sterol biosynthesis in Acanthamoeba castellanii.	Zhou W, Warrilow AGS, Thomas CD, Ramos E, Parker JE, Price CL, Vanderloop BH, Fisher PM, Loftis MD, Kelly DE, Kelly SL, Nes WD.	Biochim Biophys Acta Mol Cell Biol Lipids	10.1016/j.bbalip.2018.07.004	2018
	Nutraceuticals in Periodontal Health: A Systematic Review on the Role of Vitamins in Periodontal Health Maintenance.	Varela-Lopez A, Navarro-Hortal MD, Giampieri F, Bullon P, Battino M, Quiles JL.	Molecules	10.3390/molecules23051226	2018
	High throughput sequencing and proteomics to identify immunogenic proteins of a new pathogen: the dirty genome approach.	Greub G, Kebbi-Beghdadi C, Bertelli C, Collyn F, Riederer BM, Yersin C, Croxatto A, Raoult D.	PLoS One	10.1371/journal.pone.0008423	2009
Enzymology	Detection of Porphyromonas gingivalis from saliva by PCR by using a simple sample-processing method.	Matto J, Saarela M, Alaluusua S, Oja V, Jousimies-Somer H, Asikainen S.	J Clin Microbiol	10.1128/jcm.36.1.157-160.1998	1998
Enzymology	Detection of unculturable bacteria in periodontal health and disease by PCR.	Harper-Owen R, Dymock D, Booth V, Weightman AJ, Wade WG.	J Clin Microbiol	10.1128/jcm.37.5.1469-1473.1999	1999
	Filifactor alocis--involvement in periodontal biofilms.	Schlafer S, Riep B, Griffen AL, Petrich A, Hubner J, Berning M, Friedmann A, Gobel UB, Moter A.	BMC Microbiol	10.1186/1471-2180-10-66	2010
	Use of insertion sequence element IS1126 in a genotyping and transmission study of Porphyromonas gingivalis.	Park OJ, Min KM, Choe SJ, Choi BK, Kim KK.	J Clin Microbiol	10.1128/jcm.42.2.535-541.2004	2004
Phylogeny	Immunomagnetic PCR and DNA probe for detection and identification of Porphyromonas gingivalis.	Benkirane RM, Guillot E, Mouton C.	J Clin Microbiol	10.1128/jcm.33.11.2908-2912.1995	1995
Enzymology	Highly specific protease-based approach for detection of porphyromonas gingivalis in diagnosis of periodontitis.	Kaman WE, Galassi F, de Soet JJ, Bizzarro S, Loos BG, Veerman EC, van Belkum A, Hays JP, Bikker FJ.	J Clin Microbiol	10.1128/jcm.05313-11	2012
Phylogeny	Molecular identification of microorganisms from endodontic infections.	Rolph HJ, Lennon A, Riggio MP, Saunders WP, MacKenzie D, Coldero L, Bagg J.	J Clin Microbiol	10.1128/jcm.39.9.3282-3289.2001	2001
Phylogeny	Are putative periodontal pathogens reliable diagnostic markers?	Riep B, Edesi-Neuss L, Claessen F, Skarabis H, Ehmke B, Flemmig TF, Bernimoulin JP, Gobel UB, Moter A.	J Clin Microbiol	10.1128/jcm.01387-08	2009
	Conservation of fimbriae and the hemagglutinating adhesin HA-Ag2 among Porphyromonas gingivalis strains and other anaerobic bacteria studied by epitope mapping analysis.	Du L, Pellen-Mussi P, Chandad F, Mouton C, Bonnaure-Mallet M.	Clin Diagn Lab Immunol	10.1128/cdli.4.6.711-714.1997	1997
	Lactococcus lactis KA-FF 1-4 reduces vancomycin-resistant enterococci and impacts the human gut microbiome.	Plupjeen SN, Chawjiraphan W, Charoensiddhi S, Nitisinprasert S, Nakphaichit M.	3 Biotech	10.1007/s13205-020-02282-6	2020
	Salivary Biomarker Panel That Identifies Periodontitis in Persons With Type 2 Diabetes: A Secondary Analysis of a Cross-Sectional Study.	Miller CS, Yan Q, Kirakodu SS, Ebersole JL, Zhang XD.	J Clin Periodontol	10.1111/jcpe.70049	2025
	Prognostic Impact of Non-Impacted Third Molar Extraction on Non-Surgical Periodontal Therapy for Adjacent Second Molars: A Prospective Split-Mouth Study.	Gao R, Qu HL, Tian Y, Sun LJ, He XT, Tian BM, Yin Y, Chen FM, Wu RX.	J Clin Periodontol	10.1111/jcpe.70010	2025
	Microbial exposure and diversity in Norwegian shrimp processing plants.	Zegeye FD, Straumfors A, Lei P, Graff P, Samulin Erdem J, Afanou AK.	J Occup Environ Hyg	10.1080/15459624.2025.2491488	2025
	Multiplexed Ultrafast Photothermal Digital Polymerase Chain Reaction Based on Oligo(Phenylene-Ethynylene).	Kim GJ, Kim KH, Lee B, Han M, Rho S, Hong SY, Kim HK, Park SJ, Yun WS, Park YM, Lee KG, Ko KC, Kwon OS.	ACS Nano	10.1021/acsnano.5c04674	2025
	Regulation of NaCl on Bi-functionality of a chimeric enzyme for aromatic amino acid biosynthesis in Prevotella and Porphyromonas bacteria.	Bai Y, Dai C.	Biochem Biophys Res Commun	10.1016/j.bbrc.2025.151430	2025
	Microbial community composition in subgingival plaques and heterogeneity of tumor tissue TCRbeta CDR3 repertoire in patients with moderate-to-severe periodontitis and oral squamous cell carcinoma.	Huang J, Yang K, Gao L, He Q, Ge S.	Technol Health Care	10.3233/thc-240218	2025
Metabolism	Antimicrobial effects of epigallocatechin-3-gallate, a catechin abundant in green tea, on periodontal disease-associated bacteria.	Higuchi M, Abiko Y, Washio J, Takahashi N.	Arch Oral Biol	10.1016/j.archoralbio.2024.106063	2024
	Changes in subgingival microflora in patients with fixed orthodontic appliances.	Arbutina A, Radman IK, Umicevic-Davidovic M, Arapovic-Savic M, Deri A, Arbutina R, Marin S, Josipovic R, Trtic N.	Dental Press J Orthod	10.1590/2177-6709.30.1.e2524154.oar	2025
	Comparative evaluation of culture results and composition of microbiome of removed tonsils due to distant focal disease or other reasons. A prospective pilot study.	Bella Z, Erdelyi E, Kiricsi A, Gaal V, Lazar A, Maroti G, Wirth R, Soki J, Nagy E.	Acta Microbiol Immunol Hung	10.1556/030.2024.02279	2024
	Distinguishing tuberculosis from non-tuberculous mycobacteria and other respiratory conditions by microbiome patterns.	Oh JY, Ko YK, Jeon MH, Doo HM, Roh S, Gim JA.	Sci Rep	10.1038/s41598-025-90776-9	2025
Pathogenicity	The Impact of Prevotella on Neurobiology in Aging: Deciphering Dendritic Cell Activity and Inflammatory Dynamics.	Ahmed HS.	Mol Neurobiol	10.1007/s12035-024-04156-x	2024
	The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes.	Jensen AB, Lau EF, Greve T, Norskov-Lauritsen N.	APMIS	10.1111/apm.70002	2025
	Isolation, identification, and quantification of Prevotella intermedia and Prevotella nigrescens in subgingival plaque samples of periodontally healthy and chronic periodontitis patients through chromogenic in situ hybridization.	Kotrashetti VS, Bhat KG, Kumbar VM, Naik SS.	J Indian Soc Periodontol	10.4103/jisp.jisp_99_23	2024
Genetics	Evolutionary and Pan-genome Analysis of Three Important Black-pigmented Periodontal Pathogens.	Meng PQ, Zhang Q, Ding Y, Lin JX, Chen F.	Chin J Dent Res	10.3290/j.cjdr.b4128023	2023
	Exploring AI-Driven Machine Learning Approaches for Optimal Classification of Peri-Implantitis Based on Oral Microbiome Data: A Feasibility Study.	Pais RJ, Botelho J, Machado V, Alcoforado G, Mendes JJ, Alves R, Bessa LJ.	Diagnostics (Basel)	10.3390/diagnostics15040425	2025
Proteome	Acquired pellicle and biofilm engineering with CaneCPI-5: Insights from proteomic and microbiomics analysis.	Araujo TT, Dionizio A, Carvalho TS, Debortolli ALB, Vertuan M, de Souza BM, Camara JVF, Henrique-Silva F, Chiaratti M, Santos A, Alves L, Ferro M, Magalhaes AC, Buzalaf MAR.	Arch Oral Biol	10.1016/j.archoralbio.2024.106025	2024
Pathogenicity	Dynamic multi-omics mechanisms underpinning retinol tolerance: stage-specific reconstruction of skin barrier function and host-microbiome metabolic interactions.	Huang Y, Zhou Q, Gui M, Guo D, Cheng J, Ma W, Shu P, Liu X.	Front Microbiol	10.3389/fmicb.2025.1668712	2025
	Fusobacterium nucleatum and Treponema denticola are robust biomarkers for gingivitis and periodontitis in small dogs.	Kwon D, Bae K, Jang K, Jo HM, Kang SS, Byun J, Kim SE.	Front Vet Sci	10.3389/fvets.2024.1515521	2024
	Periodontitis and Oral Bacteria Related to Rheumatoid Arthritis: A Case-Control Study.	Hashimoto H, Nonoyama T, Takami Y, Hashimoto S, Shimazaki Y.	Int Dent J	10.1016/j.identj.2025.103856	2025
Enzymology	Fumarate and nitrite reduction by Prevotella nigrescens and Prevotella buccae isolated from Chronic Periodontitis patients.	Sharma G, Garg N, Hasan S, Saffarini D, Shirodkar S.	Microb Pathog	10.1016/j.micpath.2023.106022	2023
	Tropheryma whipplei in interstitial lung disease: A case series.	Li J, Guo B, Zhao G, Wei R, Luo Q, Zhuo C, Han Q.	Respir Med Case Rep	10.1016/j.rmcr.2025.102279	2025
	Microbiome diversity in African American, European American, and Egyptian colorectal cancer patients	Elkholy A, Avuthu N, Abdalla M, Behring M, Bajpai P, Kim HG, Header D, Abo Elwafa RA, Saed H, Embaby A, El-Nikhely N, Obuya S, Mohamed M, Badawy AA, Nawar A, Afaq F, Rogers LQ, Bae S, Shikany JM, Bateman LB, Fouad M, Saleh M, Samuel T, Varambally S, Guda C, Arafat W, Manne U.	Heliyon.		2023
	Oral microbiome dysbiosis in acute ischemic stroke and transient ischemic attack patients.	Roongpiboonsopit D, Wairit S, Nithisathienchai C, Pakdee A, Cheibchalard T, Sayasathid J, Wilantho A, Tongsima S, Somboonna N.	PLoS One	10.1371/journal.pone.0333676	2025
	Relationship Between the Presence of Red Complex Species and the Distribution of Other Oral Bacteria, Including Major Periodontal Pathogens in Older Japanese Individuals.	Kametani M, Nagasawa Y, Usuda M, Kaneki A, Ogawa M, Shojima K, Yamazaki H, Tokumoto K, Matsuoka D, Suehara K, Suehiro Y, Akitomo T, Mitsuhata C, Misaki T, Ito S, Naka S, Matsumoto-Nakano M, Nakano K, Kishimoto H, Shinmura K, Nomura R.	Int J Mol Sci	10.3390/ijms252212243	2024
	Endobronchial Infection and Bacterial Lymphadenitis by Gemella morbillorum Leading to Airway Perforation and a Bronchopleural Fistula.	DePrez KN, Ferguson J.	Case Rep Pulmonol	10.1155/2024/8850287	2024
Pathogenicity	Bypass gastroplasty impacts oral health, salivary inflammatory biomarkers, and microbiota: a controlled study.	Ribeiro ASP, Marquezin MCS, Pacheco ERP, Rasera I, Klein MI, de Vasconcellos SP, Landgraf RG, Okamoto D, Calixto LA, Castelo PM.	Clin Oral Investig	10.1007/s00784-023-05101-3	2023
	Exploring Relationships Within the Microbiome of Root Canal Infections and the Influence of Associated Clinical Parameters.	Mominkhan D, Brito LCN, Yakubu AR, Larson E, Martin L, Patel M, Tavares WLF, Ribeiro-Sobrinho A, Teles F.	Int Endod J	10.1111/iej.70011	2025
	Oral Microbial Changes in Oral Squamous Cell Carcinoma: Focus on Treponema denticola, Lactobacillus casei, and Candida albicans	Lee Y, Jung J, Hong J.	Medicina (Kaunas)		2024
	Impact of Malocclusions on Periodontopathogenic Bacterial Load and Progression of Periodontal Disease: A Quantitative Analysis.	Albu SD, Suciu I, Albu CC, Dragomirescu AO, Ionescu E.	Microorganisms	10.3390/microorganisms12081553	2024
	A Robust alpha-l-Fucosidase from Prevotella nigrescens for Glycoengineering Therapeutic Antibodies.	Kao MR, Ma TH, Chou HY, Chang SC, Cheng LC, Liao KS, Shie JJ, Harris PJ, Wong CH, Hsieh YSY.	ACS Chem Biol	10.1021/acschembio.4c00196	2024
	Oral microbial profiles of extrinsic black tooth stain in primary dentition: A literature review.	Dong X, Zhao W, Ma S, Li X, Li G, Zhang S.	J Dent Sci	10.1016/j.jds.2024.02.028	2024
	[Prevotella nigrescens exacerbates periodontal inflammation and impairs cognitive function in mice].	Chen Q, Xia T, Zhou Y, Chang M, Hu N, Yang Y, Li Z, Gao Y, Gu B.	Nan Fang Yi Ke Da Xue Xue Bao	10.12122/j.issn.1673-4254.2025.03.02	2025
	Management of Odontogenic Infections in Pregnant Patients: Case-Based Approach and Literature Review.	Hramyka A, Wieczorkiewicz A, Bargiel J, Sliwinski K, Gasiorowski K, Marecik T, Szczurowski P, Wyszynska-Pawelec G, Zapala J, Gontarz M.	Pathogens	10.3390/pathogens14101024	2025
	Methods of Orthodontic Microimplant Surface Modifications Providing Antibacterial Properties: A Systematic Review	Wadolowska A, Lis J, Kawala B, Kuc A, Zdrodowska G, Rozdzestwienska-Sowa A, Sarul M.	Materials (Basel)		2025
	Oral microbiome and risk of lung cancer: results from a two-sample mendelian randomization analysis.	Wang C, Hu B, Liang Q, Jiang H, Yuan L, Li S.	Transl Lung Cancer Res	10.21037/tlcr-2024-1163	2025
	Simultaneous detection and evaluation of Prevotella intermedia, Prevotella nigrescens, Prevotella loescheii, and Prevotella melaninogenica in subgingival plaque samples of chronic periodontitis and healthy individuals through multiplex polymerase chain reaction.	Kottrashetti VS, Bhat KG, Kugaji MS, Naik SS, Tanakanti P.	J Indian Soc Periodontol	10.4103/jisp.jisp_154_22	2023
	Oral Microbiome and Subsequent Risk of Head and Neck Squamous Cell Cancer.	Kwak S, Wang C, Usyk M, Wu F, Freedman ND, Huang WY, McCullough ML, Um CY, Shrubsole MJ, Cai Q, Li H, Ahn J, Hayes RB.	JAMA Oncol	10.1001/jamaoncol.2024.4006	2024
	Microbial Dysbiosis as an Emerging Pathology of Suicidal Behaviour? A Critical Review, Passing Through Depression to Chronic Pain.	Costanza A, Alexander J, Amerio A, Aguglia A, Magnani L, Parise A, Saverino D, Serafini G, Amore M, Nguyen KD.	Ann Neurosci	10.1177/09727531251349024	2025
	The potential bactericidal effect of oral probiotics on extrinsic black stain-associated bacteria in children: An in-vitro and in-vivo study.	Wahba N, Sharaf D, Wagdy M, El-Motayam A, Nagi B.	J Dent Sci	10.1016/j.jds.2025.04.032	2025
Genetics	Signature of oral microbial dysbiosis in different periodontitis risk levels.	Xu Y, Liu Y, Leng Y, Qian J, Yang Q, Zhu J, Li G, Peng Y.	Appl Microbiol Biotechnol	10.1007/s00253-025-13574-3	2025
	Peri-Implantitis-Associated Microbiota before and after Peri-Implantitis Treatment, the Biofilm "Competitive Balancing" Effect: A Systematic Review of Randomized Controlled Trials.	Di Spirito F, Pisano M, Di Palo MP, Franci G, Rupe A, Fiorino A, Rengo C.	Microorganisms	10.3390/microorganisms12101965	2024
	Adjuvant A-PRF Application in Patients with Various Stages of Medication-Related Osteonecrosis of the Jaw (MRONJ): Case Series.	Vasilcenko I, Cema I, Bagante I.	Reports (MDPI)	10.3390/reports8040240	2025
	Subgingival microbiota and genetic factors (A-2570G, A896G, and C1196T TLR4 polymorphisms) as periodontal disease determinants.	Castro-Casarrubias R, Castro-Alarcon N, Reyes-Fernandez S, Salazar-Hernandez E, Vazquez-Villamar M, Romero-Castro NS.	Front Dent Med	10.3389/fdmed.2025.1576429	2025
	Association Between Oral Dysbiosis and Depression: A Systematic Review.	Garcia-Rios P, Pecci-Lloret MR, Pecci-Lloret MP, Murcia-Flores L, Perez-Guzman N.	J Clin Med	10.3390/jcm14145162	2025
	Characterization of Disease Patterns in Children with Intracranial Abscesses for Enhanced Clinical Decision-Making.	Middelkamp M, Kania MM, Groth FS, Ricklefs FL, Duhrsen L.	Pediatr Rep	10.3390/pediatric16040085	2024
Genetics	Oral Dysbiosis Is Associated with the Pathogenesis of Aortic Valve Diseases.	Yaguchi E, Komiyama Y, Inami S, Shibasaki I, Shintani T, Shiraishi R, Hyodo T, Shiba H, Hamaguchi S, Fukuda H, Toyoda S, Fukumoto C, Izumi S, Wakui T, Kawamata H.	Microorganisms	10.3390/microorganisms13071677	2025
	Identification of oral anaerobic bacteria and the beta-lactamase resistance genes from Iranian patients with periodontitis.	Kalali N, Kadkhoda Z, Amid R, Ghourchian S, Douraghi M.	Anaerobe	10.1016/j.anaerobe.2022.102515	2022
	Microbiological and Pharmacological Aspects Involved in Dentin-Pulp Complex Regeneration: A Scoping Review.	Giraldo-Badillo I, Pineda-Velez E, Carbonell-Medina BA, Ardila CM.	J Clin Exp Dent	10.4317/jced.62918	2025
	Association between clusters of antibodies against periodontal microorganisms and Alzheimer disease mortality: Evidence from a nationally representative survey in the USA.	Merchant AT, Zhao L, Bawa EM, Yi F, Vidanapathirana NP, Lohman M, Zhang J.	J Periodontol	10.1002/jper.23-0006	2024
	Examining spatial microbiome variations across gastrointestinal tract regions in obesity.	Rehner J, Molano LG, Christodoulou C, Hollander S, Forster MO, Keller V, Jager J, Volz-Willems S, Becker SL, Glanemann M, Jelden M.	Sci Rep	10.1038/s41598-025-10931-0	2025
	When a sore throat turns into deadly multiple serous cavity effusions: the role of Prevotella oris in rapidly progressing infection-a case report.	Zhang F, Wang JL, Zhu J, Si S, Guo H, Yue X, Wen W.	Front Med (Lausanne)	10.3389/fmed.2025.1517389	2025
	[A cross-sectional study of periodontal pathogens in saliva of edentulous patients].	Guan XY, Liao YT, He L, Meng HX, Li P.	Zhonghua Kou Qiang Yi Xue Za Zhi	10.3760/cma.j.cn112144-20210305-00102	2021
	Antibacterial activity of Brazilian red propolis and in vitro evaluation of free radical production.	Neto NFO, Bonvicini JFS, de Souza GL, Santiago MB, Veneziani RCS, Ambrosio SR, Bastos JK, Silva MJB, Martins CHG, Moura CCG, Turrioni AP.	Arch Oral Biol	10.1016/j.archoralbio.2022.105520	2022
	Microbiological Analysis of Primary Molars Restored with Stainless Steel Crowns Compared to Healthy Molars.	Rubio A, Pereira T, Boj JR, Vinuesa T.	Microorganisms	10.3390/microorganisms13061294	2025
	The clinical effect of sodium hypochlorite oral rinse on peri-implantitis lesion: A pilot study.	Lee W, Park JB.	Heliyon	10.1016/j.heliyon.2023.e15859	2023
	Comparison of the antibacterial efficacy of 810 nm diode laser and photodynamic therapy in reducing microbial flora in patients with peri-implant mucositis - An in vivo study.	Siwach P, Sanan R, Nagpal A, Shetty OK, Bhardwaj A, Sharma M.	J Indian Prosthodont Soc	10.4103/jips.jips_64_24	2025
	Potential Shifts in the Oral Microbiome Induced by Bariatric Surgery-A Scoping Review.	Slebioda Z, Range H, Strozik-Wieczorek M, Wyganowska ML.	Antibiotics (Basel)	10.3390/antibiotics14070695	2025
	Microbiological Comparison of Maxillary Sinus Rinses in Non-Odontogenic and Odontogenic Sinusitis of Primarily Endodontic Origin.	Kwiatkowska MA, Guzek A, Jurkiewicz D, Patyk I, Pajda B, Rot P.	J Clin Med	10.3390/jcm14144880	2025
Pathogenicity	In Vitro Bioactivity and Antibacterial Activity of Strontium-, Magnesium-, and Zinc-Multidoped Hydroxyapatite Porous Coatings Applied via Atmospheric Plasma Spraying.	Liu YC, Lee YT, Huang TC, Lin GS, Chen YW, Lee BS, Tung KL.	ACS Appl Bio Mater	10.1021/acsabm.0c01535	2021
	Evaluation of Biomaterials in Periodontal Regeneration: A Literature Review.	Pranathi V, Koduganti RR, Muthyala S, Kanchanapally SP, Muthyala N, Shingade V.	Cureus	10.7759/cureus.75618	2024
	Genetic evidence from Mendelian randomization strengthens the causality between oral microbiome and chronic obstructive pulmonary disease.	Zhou X, Wen F, Qiu H, Li J.	Medicine (Baltimore)	10.1097/md.0000000000043347	2025
	Bidirectional roles of neutrophil extracellular traps in oral microbiota carcinogenesis: A systematic review.	Shen J, Lin H, Mo K, Liang Z, Zhang Y, Quan H, Wang X, Zhang C, Chen C.	Transl Oncol	10.1016/j.tranon.2025.102361	2025
	Bacteria of healthy periodontal tissues as candidates of probiotics: a systematic review.	Del Pilar Angarita-Diaz M, Fong C, Medina D.	Eur J Med Res	10.1186/s40001-024-01908-2	2024
Phylogeny	Association of Fusobacterium nucleatum in human saliva with periodontal status and composition of the salivary microbiome including periodontopathogens.	Akase T, Inubushi J, Hayashi-Okada Y, Shimizu Y.	Microbiol Spectr	10.1128/spectrum.00855-24	2024
Metabolism	Infection with Prevotella nigrescens induces TLR2 signalling and low levels of p65 mediated inflammation in Cystic Fibrosis bronchial epithelial cells.	Bertelsen A, Elborn JS, Schock BC.	J Cyst Fibros	10.1016/j.jcf.2019.09.005	2020
	Volatile sulfide compounds and oral microorganisms on the inner surface of masks in individuals with halitosis during COVID-19 pandemic.	Lee YH, Kim H, Heo DW, Ahn IS, Auh QS.	Sci Rep	10.1038/s41598-023-29080-3	2023
	Oral microbiome of the inner surface of face masks and whole saliva during the COVID-19 pandemic.	Lee YH, Kim H, Heo DW, Ahn IS, Park HK.	Front Oral Health	10.3389/froh.2023.1178020	2023
	Antibiotic Susceptibility and Resistance Genes in Oral Clinical Isolates of Prevotella intermedia, Prevotella nigrescens, and Prevotella melaninogenica.	Castillo Y, Delgadillo NA, Neuta Y, Hernandez A, Acevedo T, Cardenas E, Montano A, Lafaurie GI, Castillo DM.	Antibiotics (Basel)	10.3390/antibiotics11070888	2022
Phylogeny	Human gastric microbiota analysis of refractory H. pylori infection.	Huang X, Zhang DY, Li D, Lv Y, Chen S, Bai F.	Sci Rep	10.1038/s41598-024-66339-9	2024
	Ultrasound and computed tomography findings of hepatic portal venous gas associated with acute appendicitis in a paediatric patient: A case report.	Furuta T, Fujiwara M, Motonaga T, Matsufuji H, Tateishi H, Nakada S, Kanagawa T, Uchida M.	Ultrasound	10.1177/1742271x231195752	2024
	Metabolomic and metagenomic analyses reveal distinct microenvironmental signatures between clear aligner-associated and tooth surface dental plaque.	Xie Q, Li D, Ren C, Shen Y, Lin S, Chen W.	BMC Oral Health	10.1186/s12903-025-07231-4	2025
Genetics	Complete genome sequencing and probiotic characterization of promising lactic acid bacterial strains isolated from dairy products in Egyptian markets.	El-Hosseny MF, Seadawy MG, Abdel-Monem MO, Hassan MG.	BMC Microbiol	10.1186/s12866-025-03757-3	2025
	Gut microbiota and risk of iron deficiency anemia: A two-sample Mendelian randomization study.	Lei W, Liu Z, Lai HP, Fu R.	Medicine (Baltimore)	10.1097/md.0000000000041617	2025
	Analysis of microbiotas between traumatic and ulcerative wound: insights into challenges of current wounds managements.	Chen C, Wang J, Li Y, Fan Z, Dai Y.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1622552	2025
	Case Report: Acute Myocarditis Due to PD-L1 Inhibitor Durvalumab Monotherapy in a Patient With Lung Squamous Cell Carcinoma.	Zhou B, Li M, Chen T, She J.	Front Med (Lausanne)	10.3389/fmed.2022.866068	2022
	Gram-negative anaerobes elicit a robust keratinocytes immune response with potential insights into HS pathogenesis.	Williams SC, Garcet S, Hur H, Miura S, Gonzalez J, Navrazhina K, Yamamura-Murai M, Yamamura K, Li X, Frew J, Fischetti VA, Sela U, Krueger JG.	Exp Dermatol	10.1111/exd.15087	2024
	Characterization of the oral microbiota and the relationship of the oral microbiota with the dental and periodontal status in children and adolescents with nonsyndromic cleft lip and palate. Systematic literature review and meta-analysis.	Escobar-Arregoces F, Eras MA, Bustos A, Suarez-Castillo A, Garcia-Robayo DA, Del Pilar Bernal M.	Clin Oral Investig	10.1007/s00784-024-05624-3	2024
	Chromogenic bacterial staining of teeth: a scoping review.	Kumar M, Madi M, Vineetha R, Gopinath D.	BMC Oral Health	10.1186/s12903-025-05441-4	2025
	Oral Biofilm and Its Connection to Alzheimer's Disease.	Kurtzman GM, Horowitz RA, Johnson R, Pedro Z.	Cureus	10.7759/cureus.72841	2024
	Correlation Between LPS and LTA Levels With Clinical Features in Secondary Endodontic Infections.	Godoi EP, Fagundes PIG, Francisco PA, Delboni MG, Barbosa-Ribeiro M, Endo MS, Lopes EM, Martinho FC, Gomes BPFA.	Aust Endod J	10.1111/aej.12963	2025
Phylogeny	The blood pressure lowering effect of beetroot juice is impaired in periodontitis and recovered after periodontal treatment.	Sanchez-Orozco NY, Rosier BT, Ruiz-Gutierrez A, Marquez-Sandoval F, Artacho A, Carrera-Quintanar L, Mira A.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00622-5	2025
	Primary infectious costochondritis due to Prevotella nigrescens in an immunocompetent patient: clinical and imaging findings.	Derouane F, Lambert M, De Greef J, Malghem J, Lecouvet FE.	Skeletal Radiol	10.1007/s00256-019-3148-0	2019
Phylogeny	Full-length 16S rRNA sequencing reveals microbial characteristics in supragingival plaque of periodontitis patients.	Wen CC, Lin JCY, Salamanca E, Teng NC, Lin YJ, Wu YF, Chang HM, Chang WJ.	J Dent Sci	10.1016/j.jds.2025.03.040	2025
	Impact of active lifestyle on the primary school children saliva microbiota composition.	Mancini A, Cerulli C, Vitucci D, Lasorsa VA, Parente D, Di Credico A, Orru S, Brustio PR, Lupo C, Rainoldi A, Schena F, Capasso M, Buono P.	Front Nutr	10.3389/fnut.2023.1226891	2023
	Evaluation of the Microbiological Profile of Alveolar Residual Screws and Cleft-Adjacent Teeth in Individuals With Complete Unilateral Fissures.	Iurovschi R, Joaquim CR, de Faveri M, de Miranda TS, Feres M, de Figueiredo LC.	Cleft Palate Craniofac J	10.1177/1055665620945568	2020
	Impact of toothpaste use on the subgingival microbiome: a pilot randomized clinical trial.	Iniesta M, Vasconcelos V, Laciar F, Matesanz P, Sanz M, Herrera D.	BMC Oral Health	10.1186/s12903-025-06159-z	2025
	Latest Concepts in Endodontic and Periodontal Management of Diabetic Patients.	Kuzekanani M, Mollamohamadi Kermani S.	Cureus	10.7759/cureus.52145	2024
	Salivary levels of suPAR, HIF-1alpha and TNF-alpha in different grades of stage III periodontitis.	Tasdemir I, Ozgoren O, Yilmaz HE, Kartal E, Altunyaprak S, Saglam M.	BMC Oral Health	10.1186/s12903-025-06155-3	2025
	A Morphological Evaluation of the Antibiofilm Activity on an Implant Surface Using a New Electric Device: An In Vitro Study.	Botticelli G, Falisi G, Rastelli S, Iacomino E, Bruni A, Gerardi D, Di Fabio G, Severino M, Bernardi S.	Dent J (Basel)	10.3390/dj13040140	2025
	Alterations of Gut Microbiome Composition and Function Pre- and Post-Adenotonsillectomy in Children with Obstructive Sleep Apnea.	Chuang HH, Lee LA, Chuang LP, Li HY, Huang YS, Chou SH, Lee GS, Kuo TBJ, Yang CCH, Huang CG.	J Otolaryngol Head Neck Surg	10.1177/19160216241293070	2024
	Antibiofilm activity of Prevotella species from the cystic fibrosis lung microbiota against Pseudomonas aeruginosa.	Grassi L, Asfahl KL, Van den Bossche S, Maenhout I, Sass A, Vande Weygaerde Y, Van Braeckel E, Verhasselt B, Boelens J, Tunney MM, Dandekar AA, Coenye T, Crabbe A.	Biofilm	10.1016/j.bioflm.2024.100206	2024
	Qualitative and quantitative molecular analysis of bacteria in root canals of primary teeth with pulp necrosis.	Lemos SS, Cesar DE, ProcOpio SW, Machado FC, Ribeiro LC, Ribeiro RA.	Braz Oral Res	10.1590/1807-3107bor-2020.vol34.0093	2020
Pathogenicity	Dysbiosis of salivary microbiome and cytokines influence oral squamous cell carcinoma through inflammation.	Rai AK, Panda M, Das AK, Rahman T, Das R, Das K, Sarma A, Kataki AC, Chattopadhyay I.	Arch Microbiol	10.1007/s00203-020-02011-w	2021
	Clinical and Bacterial Markers of Periodontitis and Their Association with Incident All-Cause and Alzheimer's Disease Dementia in a Large National Survey.	Beydoun MA, Beydoun HA, Hossain S, El-Hajj ZW, Weiss J, Zonderman AB.	J Alzheimers Dis	10.3233/jad-200064	2020
	Helicobacter pylori, periodontal pathogens, and their interactive association with incident all-cause and Alzheimer's disease dementia in a large national survey.	Beydoun MA, Beydoun HA, Weiss J, Hossain S, El-Hajj ZW, Zonderman AB.	Mol Psychiatry	10.1038/s41380-020-0736-2	2021
	Microbiome diversity in African American, European American, and Egyptian colorectal cancer patients.	Elkholy A, Avuthu N, Abdalla M, Behring M, Bajpai P, Kim HG, Header D, Abo Elwafa RA, Saed H, Embaby A, El-Nikhely N, Obuya S, Mohamed M, Badawy AA, Nawar A, Afaq F, Rogers LQ, Bae S, Shikany JM, Bateman LB, Fouad M, Saleh M, Samuel T, Varambally S, Guda C, Arafat W, Manne U.	Heliyon	10.1016/j.heliyon.2023.e18035	2023
	Bidirectional interdomain crosstalk in a Porphyromonas gingivalis chimeric enzyme coordinates catalytic synergy for aromatic amino acid biosynthesis.	Yu Y, An J, Bai Y, Xu Q.	Front Microbiol	10.3389/fmicb.2025.1601098	2025
	Fermented foods and probiotic consumption frequency as protective indicators for peri-implant diseases - a cross-sectional study.	Sahin T.	BMC Oral Health	10.1186/s12903-024-04625-8	2024
	[Antimicrobial Susceptibility Profiles of Prevotella Species Determined by Gradient Test Method in Two Centers in Istanbul].	Ulger Toprak N, Akgul O, Kulekci G, Soyletir G.	Mikrobiyol Bul	10.5578/mb.69309	2020
Phylogeny	Human blood vessel microbiota in healthy adults based on common femoral arteries of brain-dead multi-organ donors.	Hidi L, Kovacs GI, Szabo D, Makra N, Penzes K, Juhasz J, Sotonyi P, Ostorhazi E.	Front Cell Infect Microbiol	10.3389/fcimb.2022.1056319	2022
	Multiple aPDT sessions on periodontitis in rats treated with chemotherapy: histomorphometrical, immunohistochemical, immunological and microbiological analyses.	Longo M, Gouveia Garcia V, Ervolino E, Ferro Alves ML, Duque C, Wainwright M, Theodoro LH.	Photodiagnosis Photodyn Ther	10.1016/j.pdpdt.2018.11.014	2019
	Enhanced dominance of nitrate-reducing bacteria using a combination of nitrate and erythritol in in vitro cultured oral biofilm.	Fujii A, Akatsu T, Souno H, Kawano S, Minegishi Y, Ota N.	J Oral Microbiol	10.1080/20002297.2025.2526069	2025
	Clinical and microbiological efficacy of indocyanine green-based antimicrobial photodynamic therapy as an adjunct to non-surgical treatment of periodontitis: a randomized controlled clinical trial.	Annunziata M, Donnarumma G, Guida A, Nastri L, Persico G, Fusco A, Sanz-Sanchez I, Guida L.	Clin Oral Investig	10.1007/s00784-023-04875-w	2023
	Maternal periodontitis may cause lower birth weight in children: genetic evidence from a comprehensive Mendelian randomization study on periodontitis and pregnancy.	Chen X, Li X, Yang K, Fang J.	Clin Oral Investig	10.1007/s00784-024-05591-9	2024
	Prevention of Initial Periodontitis Is an Investment in the Future.	Heikkinen AM, Raivisto T, Raisanen IT, Sorsa T.	Diagnostics (Basel)	10.3390/diagnostics14171850	2024
Phylogeny	Alterations of salivary microbial community associated with oropharyngeal and hypopharyngeal squamous cell carcinoma patients.	Panda M, Rai AK, Rahman T, Das A, Das R, Sarma A, Kataki AC, Chattopadhyay I.	Arch Microbiol	10.1007/s00203-019-01790-1	2020
	Antibodies against Periodontal Microorganisms and Cognition in Older Adults.	Merchant AT, Yi F, Vidanapathirana NP, Lohman M, Zhang J, Newman-Norlund RD, Fridriksson J.	JDR Clin Trans Res	10.1177/23800844211072784	2023
	Effect of oral gargle containing Lespedeza cuneata extract on periodontal health improvement and disease prevention: a randomized, controlled clinical trial.	Kim YR, Nam SH.	BMC Oral Health	10.1186/s12903-023-02816-3	2023
	Microbiome and Communication Disorders: A Tutorial for Clinicians.	Venkatraman A, Davis R, Tseng WH, Thibeault SL.	J Speech Lang Hear Res	10.1044/2024_jslhr-24-00436	2025
Enzymology	Maintenance of the aseptic working field during endodontic treatment.	Rorslett Hardersen L, Enersen M, Kristoffersen AK, Orstavik D, Sunde PT.	Acta Odontol Scand	10.1080/00016357.2019.1606935	2019
	Efficacy of salivary versus subgingival bacterial sampling for the detection and quantification of periodontal pathogens.	Lee Y, Hong Y, Kim B, Lee D, Kim S, Rhyu IC.	J Periodontal Implant Sci	10.5051/jpis.2002420121	2020
	Esketamine prevents postoperative sleep disturbance in patients with preoperative sleep disorders: a role for oral microbiota.	Li XY, Qiu D, Du N, Hashimoto K, Wang XM, Yang JJ.	Transl Psychiatry	10.1038/s41398-025-03705-9	2025
	The Effects of Nicotine Pouches and E-Cigarettes on Oral Microbes: A Pilot Study.	Miluna-Meldere S, Rostoka D, Broks R, Viksne K, Ciematnieks R, Skadins I, Kroica J.	Microorganisms	10.3390/microorganisms12081514	2024
Genetics	Assessing peri-implant bacterial community structure: the effect of microbiome sample collection method.	Anitua E, Murias-Freijo A, Tierno R, Tejero R, Alkhraisat MH.	BMC Oral Health	10.1186/s12903-024-04675-y	2024
	Treatment of periodontitis in smokers with multiple sessions of antimicrobial photodynamic therapy or systemic antibiotics: A randomized clinical trial.	Theodoro LH, Assem NZ, Longo M, Alves MLF, Duque C, Stipp RN, Vizoto NL, Garcia VG.	Photodiagnosis Photodyn Ther	10.1016/j.pdpdt.2018.04.003	2018
	The influence of diabetes mellitus on the peri-implant microflora: A cross-sectional study.	Sabanci A, Eltas A, Celik B, Otlu B.	J Oral Biol Craniofac Res	10.1016/j.jobcr.2022.05.007	2022
Genetics	Effect of implant abutment surface treatments on bacterial biofilm composition and structure.	Anitua E, Murias-Freijo A, Tierno R, Tejero R, Hamdan Alkhraisat M.	J Oral Microbiol	10.1080/20002297.2025.2459922	2025
Enzymology	Phenotypic identification of periodontal Prevotella intermedia/nigrescens group isolates validated by MALDI-TOF mass spectrometry.	Rams TE, Sautter JD, Hsiao CY, van Winkelhoff AJ.	Anaerobe	10.1016/j.anaerobe.2018.06.007	2018
Pathogenicity	Azithromycin and erythromycin susceptibility and macrolide resistance genes in Prevotella from patients with periodontal disease.	Arredondo A, Blanc V, Mor C, Nart J, Leon R.	Oral Dis	10.1111/odi.13043	2019
	Alloprevotella rava isolated from a mixed infection of an elderly patient with chronic mandibular osteomyelitis mimicking oral squamous cell carcinoma.	Ulger Toprak N, Duman N, Sacak B, Ozkan MC, Sayin E, Mulazimoglu L, Soyletir G.	New Microbes New Infect	10.1016/j.nmni.2021.100880	2021
	The Association of the Oral Microbiota with the Effects of Acid Stress Induced by an Increase of Brain Lactate in Schizophrenia Patients.	Krzysciak W, Karcz P, Bystrowska B, Szwajca M, Bryll A, Smierciak N, Ligezka A, Turek A, Kozicz T, Skalniak AE, Jagielski P, Popiela TJ, Pilecki M.	Biomedicines	10.3390/biomedicines11020240	2023
	Six months of different exercise type in sedentary primary schoolchildren: impact on physical fitness and saliva microbiota composition.	Mancini A, Vitucci D, Lasorsa VA, Lupo C, Brustio PR, Capasso M, Orru S, Rainoldi A, Schena F, Buono P.	Front Nutr	10.3389/fnut.2024.1465707	2024
	Oral microbiota signatures in obesity with or without acanthosis nigricans in a Chinese cohort	Tang Y, Li Q, Ren Z, Wu N, Zhu H, Zhang T, Yi W, Ju W, Liu Y, Hu J.	J Med Microbiol		2025
Pathogenicity	Variations in the oral microbiome are associated with depression in young adults.	Wingfield B, Lapsley C, McDowell A, Miliotis G, McLafferty M, O'Neill SM, Coleman S, McGinnity TM, Bjourson AJ, Murray EK.	Sci Rep	10.1038/s41598-021-94498-6	2021
	Efficacy of reciprocating and ultrasonic activation of 6% sodium hypochlorite in the reduction of microbial content and virulence factors in teeth with primary endodontic infection.	Aveiro E, Chiarelli-Neto VM, de-Jesus-Soares A, Zaia AA, Ferraz CCR, Almeida JFA, Marciano MA, Feres M, Gomes BPFA.	Int Endod J	10.1111/iej.13261	2020
	Antimicrobial efficacy of chlorine agents against selected oral pathogens.	Almhojd US, Lehrkinder A, Roos-Jansaker AM, Lingstrom P.	Clin Oral Investig	10.1007/s00784-023-05190-0	2023
	A signature of Prevotella copri and Faecalibacterium prausnitzii depletion, and a link with bacterial glutamate degradation in the Kenyan colorectal cancer patients.	Obuya S, Elkholy A, Avuthu N, Behring M, Bajpai P, Agarwal S, Kim HG, El-Nikhely N, Akinyi P, Orwa J, Afaq F, Abdalla M, Michael A, Farouk M, Bateman LB, Fouad M, Saleh M, Guda C, Manne U, Arafat W.	J Gastrointest Oncol	10.21037/jgo-22-116	2022
	Quantification of Bacteria in Mouth-Rinsing Solution for the Diagnosis of Periodontal Disease.	Kim JH, Oh JW, Lee Y, Yun JH, Choi SH, Lee DW.	J Clin Med	10.3390/jcm10040891	2021
	Oral Microbiome in Orthodontic Acrylic Retainer.	Kasibut P, Kuvatanasuchati J, Thaweboon B, Sirisoontorn I.	Polymers (Basel)	10.3390/polym14173583	2022
	Cross-sectional analysis of risk factors for subclinical periodontitis; active matrix metalloproteinase-8 as a potential indicator in initial periodontitis in adolescents.	Heikkinen AM, Raisanen IT, Tervahartiala T, Sorsa T.	J Periodontol	10.1002/jper.18-0450	2019
	Oral health in adolescents: periodontal inflammatory biomarkers during orthodontic clear aligner therapy.	Kredig C, Peuckert E, Schmidtmann I, Drechsler T, Erbe C.	Clin Oral Investig	10.1007/s00784-025-06212-9	2025
	Altered oral microbiome in Sudanese Toombak smokeless tobacco users carries a newly emerging risk of squamous cell carcinoma development and progression.	Sami A, Elimairi I, Ryan CA, Stanton C, Patangia D, Ross RP.	Sci Rep	10.1038/s41598-023-32892-y	2023
	Biological properties and chemical composition of essential oil from Nectandra megapotamica (Spreng.) Mez. leaves (Lauraceae).	Almeida KCR, Silva BB, Alves CCF, Vieira TM, Crotti AEM, Crotti AEM, Souza JM, Martins CHG, Ribeiro AB, Squarisi IS, Tavares DC, Bernabe LDS, Magalhaes LG, Miranda MLD.	Nat Prod Res	10.1080/14786419.2019.1608539	2020
	[Study on periodontal status of patients with pre-diabetes].	Jin DSS, Liao YT, He L, Meng HX, Li P.	Zhonghua Kou Qiang Yi Xue Za Zhi	10.3760/cma.j.issn.1002-0098.2019.03.003	2019
Enzymology	Chemical composition of essential oils from different parts of Protium heptaphyllum (Aubl.) Marchand and their in vitro antibacterial activity.	Cabral RSC, Alves CCF, Batista HRF, Sousa WC, Abrahao IS, Crotti AEM, Crotti AEM, Santiago MB, Martins CHG, Miranda MLD.	Nat Prod Res	10.1080/14786419.2018.1536659	2020
Enzymology	Evaluation of the Associations Between Cervical Microbiota and HPV Infection, Clearance, and Persistence in Cytologically Normal Women.	Ritu W, Enqi W, Zheng S, Wang J, Ling Y, Wang Y.	Cancer Prev Res (Phila)	10.1158/1940-6207.capr-18-0233	2019
Genetics	Novel potential biomarkers for predicting childhood caries via metagenomic analysis.	Zhang H, Zheng X, Huang Y, Zou Y, Zhang T, Repo MA, Yin M, You Y, Jie Z, Xu WA.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1522970	2025
	Analysis of the Microbiome on the Surface of Corroded Titanium Dental Implants in Patients with Periimplantitis and Diode Laser Irradiation as an Aid in the Implant Prosthetic Treatment: An Ex Vivo Study.	Wawrzyk A, Rahnama M, Sofinska-Chmiel W, Wilczynski S, Gutarowska B, Konka A, Zeljas D, Lobacz M.	Materials (Basel)	10.3390/ma15175890	2022
	Differences Between Vietnamese Living in Germany and German Periodontitis Patients in Periodontal Conditions and Subgingival Microbiota.	Reichert S, Switala H, Schulz S.	Int Dent J	10.1016/j.identj.2024.09.021	2025
	Vapor-Induced Pore-Forming Atmospheric-Plasma-Sprayed Zinc-, Strontium-, and Magnesium-Doped Hydroxyapatite Coatings on Titanium Implants Enhance New Bone Formation-An In Vivo and In Vitro Investigation.	Hou HH, Lee BS, Liu YC, Wang YP, Kuo WT, Chen IH, He AC, Lai CH, Tung KL, Chen YW.	Int J Mol Sci	10.3390/ijms24054933	2023
	Periodontitis History Shapes the Early Peri-Implant Microbiome Formation: A Metagenomic Analysis.	Wang M, Liu YB, Tong WM, Leung WK, He LL, Xu X, Xu D, Zhou Q.	J Clin Periodontol	10.1111/jcpe.14147	2025
	Altered microbiota of the lower respiratory tract and its association with COVID-19 severity analysed by metagenomics and metatranscriptomics.	Wang D, Duan Y, He L, Jiang J, Xian J, Yuan K, Zhang R, Zhang H, Wang J, Li N, Huang M, Hu C, Lu S, Luo Z, Deng T, Zhang Z, Chen B, Li W.	Commun Biol	10.1038/s42003-025-08234-1	2025
Transcriptome	Longitudinal profiling of host response and oropharyngeal respiratory microbiome reveals dynamic alterations during recovery from community-acquired pneumonia.	Hong L, Suo L, Chang K, Cao H, Luan J, Zhang F, Yu X, Zou X, Liu B, Cao B, CAP-China Network.	Biosaf Health	10.1016/j.bsheal.2025.05.004	2025
	Stannous fluoride forms aggregates between outer and inner membranes leading to membrane rupture of Porphyromonas gingivalis and Prevotella pallens.	Xie S, Iberi V, Boissy Y, Tansky CS, Huggins T, Ramji N, Biesbrock AR.	Front Oral Health	10.3389/froh.2024.1427008	2024
Phylogeny	Comparative Molecular Analysis of Gram-Negative Bacteria in Primary Teeth with Irreversible Pulpitis or Periapical Pathology.	Nelson-Filho P, Ruviere DB, de Queiroz AM, de Paula-Silva FWG, Silva RABD, Lucisano MP, da Silva LAB.	Pediatr Dent		2018
Phylogeny	Comparative analysis of oral microbiome in saliva samples of oral leukoplakia, proliferative leukoplakia and oral squamous cell carcinoma.	Intini R, Balsells S, Bagan L, Fortuna G, Sroussi H, Bagan J.	Front Oral Health	10.3389/froh.2025.1600090	2025
	Molecular detection of feline and canine periodontal pathogens.	Ozavci V, Erbas G, Parin U, Yuksel HT, Kirkan S.	Vet Anim Sci	10.1016/j.vas.2019.100069	2019
Phylogeny	Association between exacerbation history and airway bacterial community assessed by extended bacterial culture and sequencing approaches in stable COPD.	Lecomte-Thenot Q, Perotin JM, Hery-Arnaud G, Velo-Suarez L, Brisebarre A, Clarenne A, Gouriou S, Dury S, Deslee G, Muggeo A, Guillard T, RINNOPARI Study Group includes.	Sci Rep	10.1038/s41598-025-14994-x	2025
	Chemical composition and in vitro leishmanicidal, antibacterial and cytotoxic activities of essential oils of the Myrtaceae family occurring in the Cerrado biome	da Silva VP, Alves CCF, Miranda MLD, Bretanha LC, Balleste MP, Micke GA, Silveira EV, Martins CHG, Ambrosio MALV, de Souza Silva T, Tavares DC, Magalhaes LG, Silva FG, Egea MB.	Industrial crops and products.	10.1016/j.indcrop.2018.07.033	2018
	Efficacy and mechanisms of cannabis oil for alleviating side effects of breast cancer chemotherapy (CBC2): protocol for randomized controlled trial.	Thu MS, Pongpirul K, Vongsaisuwon M, Vinayanuwattikun C, Banchuen K, Ondee T, Payungporn S, Phutrakool P, Nootim P, Chariyavilaskul P, Cherdchom S, Wanaratna K, Hirankarn N.	BMC Complement Med Ther	10.1186/s12906-024-04426-0	2024
Metabolism	Reciprocal allostery arising from a bienzyme assembly controls aromatic amino acid biosynthesis in Prevotella nigrescens.	Bai Y, Parker EJ.	J Biol Chem	10.1016/j.jbc.2021.101038	2021
	Evaluating the effect of local pH on fluorescence emissions from oral bacteria of the genus Prevotella.	Hope CK, Higham SM.	J Biomed Opt	10.1117/1.jbo.21.8.084003	2016
	Antimicrobial Effects of Mastic Extract Against Oral and Periodontal Pathogens.	Koychev S, Dommisch H, Chen H, Pischon N.	J Periodontol	10.1902/jop.2017.150691	2017
Transcriptome	Impact of surface characteristics on the peri-implant microbiome in health and disease.	Sinjab K, Sawant S, Ou A, Fenno JC, Wang HL, Kumar P.	J Periodontol	10.1002/jper.23-0205	2024
	Is the Physiological Composition of the Vaginal Microbiome Altered in High-Risk HPV Infection of the Uterine Cervix?	Rokos T, Holubekova V, Kolkova Z, Hornakova A, Pribulova T, Kozubik E, Biringer K, Kudela E.	Viruses	10.3390/v14102130	2022
	Bacterial diversity in primary infected root canals of a Chinese cohort: analysis of 16 S rDNA sequencing.	Hu Z, Xiang Y, Wei Y, Gu X, Leng W, Xia L.	BMC Oral Health	10.1186/s12903-023-03618-3	2023
	Benefits of Antimicrobial Photodynamic Therapy as an Adjunct to Non-Surgical Periodontal Treatment in Smokers with Periodontitis: A Systematic Review and Meta-Analysis.	Villafuerte KRV, Martinez CJH, Palucci Vieira LH, Nobre AV.	Medicina (Kaunas)	10.3390/medicina59040684	2023
	A randomized, placebo-controlled clinical trial evaluating of a mouthwash containing Sambucus williamsii var. coreana extract for prevention of gingivitits.	Kim YR, Nam SH.	Sci Rep	10.1038/s41598-022-15445-7	2022
	Early and accurate detection of bacterial isolates from dental plaque in subjects with primary, mixed, and permanent dentition by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry technique.	Srivastava A, Saha S, Sahu C.	J Indian Soc Periodontol	10.4103/jisp.jisp_303_19	2020
	Peri-Implant Inflammation in Waterpipe Users and Cigarette Smokers: An Observational Study.	Ali D, Al-Yahya QM, Baskaradoss JK.	Int Dent J	10.1016/j.identj.2023.03.005	2023
	Subgingival Microbiota and Periodontal Clinical Status in Patients with Plaque Psoriasis: A Cross-Sectional Study.	Orozco-Molina G, Casillas-Santana M, Flores-Ledesma A, Martinez-Arroniz F, Castaneda-Saucedo E, Martinez-Aguilar V, Diaz-Zuniga A, Leon-Dorantes G, Arreguin-Cano JA.	Indian J Dermatol	10.4103/ijd.ijd_394_22	2023
	The Main Bacterial Communities Identified in the Sites Affected by Periimplantitis: A Systematic Review.	Iusan SAL, Lucaciu OP, Petrescu NB, Mirica IC, Toc DA, Albu S, Costache C.	Microorganisms	10.3390/microorganisms10061232	2022
	Revisiting Socransky's Complexes: A Review Suggesting Updated New Bacterial Clusters (GF-MoR Complexes) for Periodontal and Peri-Implant Diseases and Conditions.	Fernandes GVO, Mosley GA, Ross W, Dagher A, Martins BGDS, Fernandes JCH.	Microorganisms	10.3390/microorganisms12112214	2024
	Clinical and microbiological effectiveness of photodynamic therapy on primary endodontic infections: a 6-month randomized clinical trial.	de Miranda RG, Colombo APV.	Clin Oral Investig	10.1007/s00784-017-2270-4	2018
	Balancing the Oral-Gut-Brain Axis with Diet.	Kerstens R, Ng YZ, Pettersson S, Jayaraman A.	Nutrients	10.3390/nu16183206	2024
	Frequency of putative periodontal pathogens among type 1 diabetes mellitus: a case-control study.	Mahalakshmi K, Arangannal P, Santoshkumari.	BMC Res Notes	10.1186/s13104-019-4364-3	2019
Phylogeny	Potential Roles of the Free Salivary Microbiome Dysbiosis in Periodontal Diseases.	Diao J, Yuan C, Tong P, Ma Z, Sun X, Zheng S.	Front Cell Infect Microbiol	10.3389/fcimb.2021.711282	2021
	Effect of Probiotic Lactobacillus salivarius on Peri-Implantitis Pathogenic Bacteria: An In Vitro Study.	Mulla M, Hegde S, Koshy A, Mulla M.	Cureus	10.7759/cureus.20808	2021
	E-Cigarette Use, Cigarette Smoking, and Sex Are Associated With Nasal Microbiome Dysbiosis.	Hickman E, Roca C, Zorn BT, Rebuli ME, Robinette C, Wolfgang MC, Jaspers I.	Nicotine Tob Res	10.1093/ntr/ntae176	2024
	Biological Activity of Copaiba in Damage to the Alveolar Bone in a Model of Periodontitis Induced in Rats.	Dos Santos VRN, Motta JVDS, Frazao DR, Ferreira RO, Souza-Monteiro D, Baia-da-Silva DC, Mendes PFS, Bittencourt LO, de Moura JDM, Lameira OA, Balbinot GS, Collares FM, Rosing CK, Lima RR.	Molecules	10.3390/molecules27196255	2022
Phylogeny	Cross-population tongue image features and tongue coating microbiome changes in the evolution of colorectal cancer.	Liu F, Su D, Shi X, Xu SM, Dong YK, Li Z, Cao B, Ren DL.	Front Microbiol	10.3389/fmicb.2025.1442732	2025
	Detection and genetic characterization of beta-lactamases in Prevotella intermedia and Prevotella nigrescens isolated from oral cavity infections and peritonsillar abscesses.	Fernandez-Canigia L, Cejas D, Gutkind G, Radice M.	Anaerobe	10.1016/j.anaerobe.2015.01.007	2015
Enzymology	Black-pigmented anaerobic bacteria associated with ovine periodontitis.	Borsanelli AC, Gaetti-Jardim E, Schweitzer CM, Viora L, Busin V, Riggio MP, Dutra IS.	Vet Microbiol	10.1016/j.vetmic.2017.03.032	2017
	Minocycline and Its Impact on Microbial Dysbiosis in the Skin and Gastrointestinal Tract of Acne Patients.	Thompson KG, Rainer BM, Antonescu C, Florea L, Mongodin EF, Kang S, Chien AL.	Ann Dermatol	10.5021/ad.2020.32.1.21	2020
	Herbal Composite Preparation and Investigating its Efficiency to Inhibit Biofilm Formation and Virulence Factors of Prevotella Intermedia and Porphyromonas Gingivalis - Formulation of Mouthwash Using a Herbal Composite and Evaluating its Anti-microbial Activity.	Peeran SW, Murugan M, Doggalli N, Fageeh H, Ibrahim W, Al-Ak'hali MS, Basheer SN.	J Pharm Bioallied Sci	10.4103/jpbs.jpbs_998_23	2024
Pathogenicity	Association of Dental Infections with Intracranial Atherosclerotic Stenosis.	Sen S, Meyer J, Mascari R, Trivedi T, Suri F, Wasserman B, Rosamond W, Moss K, Beck J, Gottesman RF.	Cerebrovasc Dis	10.1159/000530829	2024
	Antibacterial activity of commercially available plant-derived essential oils against oral pathogenic bacteria.	Bardaji DK, Reis EB, Medeiros TC, Lucarini R, Crotti AE, Martins CH.	Nat Prod Res	10.1080/14786419.2015.1043630	2016
	Co-enrichment of cancer-associated bacterial taxa is correlated with immune cell infiltrates in esophageal tumor tissue.	Greathouse KL, Stone JK, Vargas AJ, Choudhury A, Padgett RN, White JR, Jung A, Harris CC.	Sci Rep	10.1038/s41598-023-48862-3	2024
	Prevalence of Microorganisms in Atherosclerotic Plaques of Coronary Arteries: A Systematic Review and Meta-Analysis.	Razeghian-Jahromi I, Elyaspour Z, Zibaeenezhad MJ, Hassanipour S.	Evid Based Complement Alternat Med	10.1155/2022/8678967	2022
Pathogenicity	Chemical composition, antioxidant and antibacterial activities of essential oils from leaves and flowers of Eugenia klotzschiana Berg (Myrtaceae).	Carneiro NS, Alves CCF, Alves JM, Egea MB, Martins CHG, Silva TS, Bretanha LC, Balleste MP, Micke GA, Silveira EV, Miranda MLD.	An Acad Bras Cienc	10.1590/0001-3765201720160652	2017
Genetics	Oral microbiome and risk of incident head and neck cancer: A nested case-control study.	Wu Z, Han Y, Wan Y, Hua X, Chill SS, Teshome K, Zhou W, Liu J, Wu D, Hutchinson A, Jones K, Dagnall CL, Hicks BD, Liao L, Hallen-Adams H, Shi J, Abnet CC, Sinha R, Chaturvedi A, Vogtmann E.	Oral Oncol	10.1016/j.oraloncology.2022.106305	2023
	Parkinson's disease alters the composition of subgingival microbiome.	Yay E, Yilmaz M, Toygar H, Balci N, Alvarez Rivas C, Bolluk Kilic B, Zirh A, Paster B, Kantarci A.	J Oral Microbiol	10.1080/20002297.2023.2250650	2023
Metabolism	Dipeptidyl peptidase IV and quorum sensing signaling in biofilm-related virulence of Prevotella aurantiaca.	Fteita D, Musrati AA, Kononen E, Ma X, Gursoy M, Peurla M, Soderling E, Sintim HO, Gursoy UK.	Anaerobe	10.1016/j.anaerobe.2017.08.009	2017
	Suspension of oral hygiene practices highlights key bacterial shifts in saliva, tongue, and tooth plaque during gingival inflammation and resolution.	Hall MW, Wellappuli NC, Huang RC, Wu K, Lam DK, Glogauer M, Beiko RG, Senadheera DB.	ISME Commun	10.1038/s43705-023-00229-5	2023
	The link between inflammatory/ SCFA profiles and oral/gut microbiome: an observational study in patients with ST-segment elevation myocardial infarction	Constantino-Jonapa L, Aguilar-Villegas O, Hernandez-Ruiz P, Escalona-Montano A, Pallecchi M, Gonzalez-Pacheco H, Bartolucci G, Baldi S, Amezcua-Guerra L, Amedei A, Aguirre-Garcia M.	Curr Res Microb Sci		2025
Phylogeny	Frequency of bacetrial content finding in persistant periapical lesions.	Grgurevic J, Ivanisevic Malcic A, Tambic Andrasevic A, Prpic Mehicic G, Kuzmac S, Jukic S.	Acta Stomatol Croat	10.15644/asc51/3/5	2017
Enzymology	Microbiological and clinical assessment of the abutment and non-abutment teeth of partial removable denture wearers.	Costa L, do Nascimento C, de Souza VO, Pedrazzi V.	Arch Oral Biol	10.1016/j.archoralbio.2016.11.002	2017
Genetics	Characterization and ex vivo modelling of endodontic infections from the Arabian Gulf region.	Nassar R, Nassar M, Mohamed L, Senok A, Williams D.	Int Endod J	10.1111/iej.14227	2025
Phylogeny	Comparative analysis of oropharyngeal microbiota in healthcare workers post-COVID-19.	Wei Y, Yu W, Zhang Z, Liu S, Xue J, Wu C, Gao Z, Guo S.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1347345	2024
	Arthritis-induced alveolar bone loss is associated with changes in the composition of oral microbiota.	Correa JD, Saraiva AM, Queiroz-Junior CM, Madeira MF, Duarte PM, Teixeira MM, Souza DG, da Silva TA.	Anaerobe	10.1016/j.anaerobe.2016.03.006	2016
Pathogenicity	Effects of blue-light LED toothbrush on reducing dental plaque and gingival inflammation in orthodontic patients with fixed appliances: a crossover randomized controlled trial.	Manphibool C, Matangkasombut O, Chantarangsu S, Chantarawaratit PO.	BMC Oral Health	10.1186/s12903-023-02977-1	2023
	Diversity, composition, and networking of saliva microbiota distinguish the severity of COVID-19 episodes as revealed by an analysis of 16S rRNA variable V1-V3 region sequences.	Larios Serrato V, Meza B, Gonzalez-Torres C, Gaytan-Cervantes J, Gonzalez Ibarra J, Santacruz Tinoco CE, Anguiano Hernandez YM, Martinez Miguel B, Cazarez Cortazar A, Sarquiz Martinez B, Alvarado Yaah JE, Mendoza Perez AR, Palma Herrera JJ, Garcia Soto LM, Chavez Rojas AI, Bravo Mateos G, Samano Marquez G, Grajales Muniz C, Torres J.	mSystems	10.1128/msystems.01062-22	2023
	Sputum Microbiome Composition in Patients with Squamous Cell Lung Carcinoma.	Baranova E, Druzhinin V, Matskova L, Demenkov P, Volobaev V, Minina V, Larionov A, Titov V.	Life (Basel)	10.3390/life12091365	2022
	Changes in Oral Microbial Diversity in a Piglet Model of Traumatic Brain Injury.	Jeon JH, Lourenco JM, Fagan MM, Welch CB, Sneed SE, Dubrof S, Duberstein KJ, Callaway TR, West FD, Park HJ.	Brain Sci	10.3390/brainsci12081111	2022
	Anaerobic Bacteria in Implants and Homologous Teeth 2-14 Years after Implantation.	Savic I, Bosnjak A, Beader N, Lovric Z, Salihagic A, Gasparac I.	Acta Stomatol Croat	10.15644/asc52/3/3	2018
	A Potential Link Between Oral Microbiota and Female Reproductive Health.	Marcickiewicz J, Jamka M, Walkowiak J.	Microorganisms	10.3390/microorganisms13030619	2025
	Antibacterial, antifungal, and phytochemical properties of Salsola kali ethanolic extract.	Bashir S, Behiry S, Al-Askar AA, Kowalczewski PL, Emaish HH, Abdelkhalek A.	Open Life Sci	10.1515/biol-2022-0962	2024
Enzymology	Longitudinal study on clinical and microbial analysis of periodontal status in pregnancy.	Machado FC, Cesar DE, Apolonio AC, Ribeiro LC, Ribeiro RA.	Braz Oral Res	10.1590/1807-3107bor-2016.vol30.0087	2016
	High-performing cross-dataset machine learning reveals robust microbiota alteration in secondary apical periodontitis.	Li H, Li J, Hu J, Chen J, Zhou W.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1393108	2024
	Alterations in serum metabolomics during the first seizure and after effective control of epilepsy.	Lian X, Liu Z, Liu S, Jin L, Wu T, Chen Y, Li S, Kang W, Lian Y, Jiang Y, Ren Z.	Sci Rep	10.1038/s41598-024-68966-8	2024
	Photoinactivation and Photoablation of Porphyromonas gingivalis.	Harris DM, Sulewski JG.	Pathogens	10.3390/pathogens12091160	2023
Genetics	Periodontal infectogenomics: a systematic review update of associations between host genetic variants and subgingival microbial detection.	Zoheir N, Kurushima Y, Lin GH, Nibali L.	Clin Oral Investig	10.1007/s00784-021-04233-8	2022
	Biological Application of the Allopathic Characteristics of the Genus Maclura: A Review.	Sainz-Hernandez JC, Rueda-Puente EO, Cornejo-Ramirez YI, Bernal-Mercado AT, Gonzalez-Ocampo HA, Lopez-Corona BE.	Plants (Basel)	10.3390/plants12193480	2023
	Alteration of salivary microbiome in periodontitis with or without type-2 diabetes mellitus and metformin treatment.	Sun X, Li M, Xia L, Fang Z, Yu S, Gao J, Feng Q, Yang P.	Sci Rep	10.1038/s41598-020-72035-1	2020
Phylogeny	Molecular Identification of Cultivable Bacteria From Infected Root Canals Associated With Acute Apical Abscess.	Nobrega LM, Montagner F, Ribeiro AC, Mayer MA, Gomes BP.	Braz Dent J	10.1590/0103-6440201600715	2016
	Effect of bioactive dental adhesive on periodontal and endodontic pathogens.	Wang L, Xie X, Weir MD, Fouad AF, Zhao L, Xu HH.	J Mater Sci Mater Med	10.1007/s10856-016-5778-2	2016
	Prevalence of eight putative periodontal pathogens in atherosclerotic plaque of coronary artery disease patients and comparing them with noncardiac subjects: A case-control study.	Mahendra J, Mahendra L, Nagarajan A, Mathew K.	Indian J Dent Res	10.4103/0970-9290.159164	2015
Transcriptome	Microbial Relationship of Carious Deciduous Molars and Adjacent First Permanent Molars.	Shi W, Tian J, Xu H, Qin M.	Microorganisms	10.3390/microorganisms11102461	2023
	Relationship between soluble neuropilin-1 in the gingival crevicular fluid of early pregnant women and different severities of periodontitis: A cross-sectional study.	Prieto D, Pino-Lagos K, Realini O, Caceres F, Retamal I, Chaparro A.	J Oral Biol Craniofac Res	10.1016/j.jobcr.2023.03.001	2023
Genetics	Distribution of 8 periodontal microorganisms in family members of Chinese patients with aggressive periodontitis.	Feng X, Zhu L, Xu L, Meng H, Zhang L, Ren X, Lu R, Tian Y, Shi D, Wang X.	Arch Oral Biol	10.1016/j.archoralbio.2014.11.015	2015
Phylogeny	Association of gestational diabetes mellitus with changes in gut microbiota composition at the species level.	Chen F, Gan Y, Li Y, He W, Wu W, Wang K, Li Q.	BMC Microbiol	10.1186/s12866-021-02207-0	2021
Genetics	TRAF3IP2-IL-17 Axis Strengthens the Gingival Defense against Pathogens.	Zhang J, Sun L, Withanage MHH, Ganesan SM, Williamson MA, Marchesan JT, Jiao Y, Teles FR, Yu N, Liu Y, Wu D, Moss KL, Mangalam AK, Zeng E, Lei YL, Zhang S.	J Dent Res	10.1177/00220345221123256	2023
	Missing Teeth as an Early Predictive "Sign" for Atherosclerosis: A Retrospective Study.	Ahmed J, Nithin T, Sujir N, Shenoy N.	ARYA Atheroscler	10.48305/arya.2022.11771.2405	2022
	Microbial diversity of the supra- and subgingival biofilm of healthy individuals after brushing with chlorhexidine- or silver-coated toothbrush bristles.	do Nascimento C, Paulo DF, Pita MS, Pedrazzi V, de Albuquerque Junior RF.	Can J Microbiol	10.1139/cjm-2014-0565	2015
	The Bidirectional Effects of Periodontal Disease and Oral Dysbiosis on Gut Inflammation in Inflammatory Bowel Disease.	Zilberstein NF, Engen PA, Swanson GR, Naqib A, Post Z, Alutto J, Green SJ, Shaikh M, Lawrence K, Adnan D, Zhang L, Voigt RM, Schwartz J, Keshavarzian A.	J Crohns Colitis	10.1093/ecco-jcc/jjae162	2025
	Bacterial Periodontitis in Horses: An Epidemiological Study in Southern Italy.	Occhiogrosso L, Capozza P, Buonavoglia A, Decaro N, Trotta A, Marin C, Corrente M.	Animals (Basel)	10.3390/ani13111814	2023
	Clinical Study and Microbiological Analysis of Periodontopathogenic Microflora Analyzed among Children and Adolescents with Cardiovascular Diseases Compared to Group with Good General Status.	Chipirliu O, Craciun MV, Matei MN.	Pediatr Rep	10.3390/pediatric16020041	2024
	Mapping the geographical distribution of the mucosa-associated gut microbiome in GI-symptomatic children with autism spectrum disorder.	Reeves KD, Figuereo YF, Weis VG, Hsu FC, Engevik MA, Krigsman A, Walker SJ.	Am J Physiol Gastrointest Liver Physiol	10.1152/ajpgi.00101.2024	2024
	Exploring the Role of IL-17A in Oral Dysbiosis-Associated Periodontitis and Its Correlation with Systemic Inflammatory Disease.	Irie K, Azuma T, Tomofuji T, Yamamoto T.	Dent J (Basel)	10.3390/dj11080194	2023
	Host-microbe computational proteomic landscape in oral cancer revealed key functional and metabolic pathways between Fusobacterium nucleatum and cancer progression.	Munoz-Grez CP, Vidal MA, Rojas TB, Ferrada LE, Zuniga FA, Vera AA, Sanhueza SA, Quiroga RA, Cabrera CD, Antilef BE, Cartes RA, Acevedo MP, Fraga MA, Alarcon-Zapata PF, Hernandez MA, Salas-Burgos AM, Tapia-Belmonte F, Yanez ML, Riquelme EM, Gonzalez WA, Rivera CA, Onate AA, Lamperti LI, Nova-Lamperti E.	Int J Oral Sci	10.1038/s41368-024-00326-8	2025
	Novel bacterial proteolytic and metabolic activity associated with dental erosion-induced oral dysbiosis.	Cleaver LM, Carda-Dieguez M, Moazzez R, Carpenter GH.	Microbiome	10.1186/s40168-023-01514-0	2023
	Endodontic Sealers and Innovations to Enhance Their Properties: A Current Review.	Blaszczyk-Pospiech A, Struzik N, Szymonowicz M, Sarelo P, Wisniewska-Wrona M, Wisniewska K, Dobrzynski M, Wawrzynska M.	Materials (Basel)	10.3390/ma18184259	2025
	Antimicrobial Behavior and Cytotoxicity of Indocyanine Green in Combination with Visible Light and Water-Filtered Infrared A Radiation against Periodontal Bacteria and Subgingival Biofilm.	Solarte DLG, Rau SJ, Hellwig E, Vach K, Al-Ahmad A.	Biomedicines	10.3390/biomedicines10050956	2022
Pathogenicity	Proinflammatory Activity of Primarily Infected Endodontic Content against Macrophages after Different Phases of the Root Canal Therapy.	Marinho AC, Martinho FC, Leite FR, Nascimento GG, Gomes BP.	J Endod	10.1016/j.joen.2015.01.017	2015
	Effects of different periodontal interventions on the risk of adverse pregnancy outcomes in pregnant women: a systematic review and network meta-analysis of randomized controlled trials.	Wu J, Wu J, Tang B, Zhang Z, Wei F, Yu D, Li L, Zhao Y, Wang B, Wu W, Hong X.	Front Public Health	10.3389/fpubh.2024.1373691	2024
	Correlations between Dental Implant Infectious Pathologies and Maxillary Sinusitis: A Review Article.	Iusan SAL, Costache C, Lucaciu OP, Petrescu BN, Mirica IC, Toc DA, Albu S.	J Clin Med	10.3390/jcm12155059	2023
	Novel bioactive nanocomposite for Class-V restorations to inhibit periodontitis-related pathogens.	Wang L, Melo MA, Weir MD, Xie X, Reynolds MA, Xu HH.	Dent Mater	10.1016/j.dental.2016.09.023	2016
Phylogeny	Unraveling the impact of primary immunodeficiency disorders on the microbiota of dental caries in children through 16S rRNA gene-based metagenomic analysis.	Al-Kebsi BLA, Kars G, Ozer H, Guner SN.	Turk J Med Sci	10.55730/1300-0144.5719	2023
	The Hidden World Within: Microbial Dynamics in Root Canal Systems.	Sedani S, Kriplani S, Thakare A, Patel A.	Cureus	10.7759/cureus.60577	2024
	Salivary Microbiota Associated with Immunoglobulin A Nephropathy.	Piccolo M, De Angelis M, Lauriero G, Montemurno E, Di Cagno R, Gesualdo L, Gobbetti M.	Microb Ecol	10.1007/s00248-015-0592-9	2015
	Epstein-Barr virus associated peri-implantitis: a split-mouth study.	Verdugo F, Castillo A, Castillo F, Uribarri A.	Clin Oral Investig	10.1007/s00784-014-1250-1	2015
Metabolism	Does estradiol have an impact on the dipeptidyl peptidase IV enzyme activity of the Prevotella intermedia group bacteria?	Fteita D, Kononen E, Gursoy M, Soderling E, Gursoy UK.	Anaerobe	10.1016/j.anaerobe.2015.09.002	2015
	Treponema denticola as a prognostic biomarker for periodontitis in dogs.	Kwon D, Bae K, Kim H, Kim SH, Lee D, Lee JH.	PLoS One	10.1371/journal.pone.0262859	2022
	Can text messages encourage flossing among orthodontic patients?	Santos JB, Pereira LC, Neves JG, Pithon MM, Santamaria M.	Angle Orthod	10.2319/012121-61.1	2021
	Detection of Helicobacter pylori from Extracted Teeth of a Patient with Idiopathic Thrombocytopenic Purpura.	Hamada M, Nomura R, Matayoshi S, Ogaya Y, Kameyama H, Uzawa N, Nakano K.	Microorganisms	10.3390/microorganisms10112285	2022
	Effect of low-level laser therapy as an adjuvant in the treatment of periodontitis induced in rats subjected to 5-fluorouracil chemotherapy.	Theodoro LH, Longo M, Ervolino E, Duque C, Ferro-Alves ML, Assem NZ, Louzada LM, Garcia VG.	J Periodontal Res	10.1111/jre.12347	2016
Enzymology	Association of periodontitis with increased colonization by Prevotella nigrescens.	Stingu CS, Schaumann R, Jentsch H, Eschrich K, Brosteanu O, Rodloff AC.	J Investig Clin Dent	10.1111/j.2041-1626.2012.00129.x	2013
	Potential Impact of Microbial Variations After Peri-Implantitis Treatment on Peri-Implant Clinical, Radiographic, and Crevicular Parameters: A Systematic Review.	Di Spirito F, Pisano M, Di Palo MP, Salzano F, Rupe A, Fiorino A, Rengo C.	Dent J (Basel)	10.3390/dj12120414	2024
Genetics	Urogenital colonization and pathogenicity of E. Coli in the vaginal microbiota during pregnancy.	Boutouchent N, Vu TNA, Landraud L, Kennedy SP.	Sci Rep	10.1038/s41598-024-76438-2	2024
Metabolism	Life stage impact on the human skin ecosystem: lipids and the microbial community.	Pagac MP, Davient B, Plado LA, Lam HYI, Lee SM, Ravikrishnan A, Chua WLE, Muralidharan S, Sridharan A, Irudayaswamy AS, Srinivas R, Wearne S, Mohamed Naim AN, Ho EXP, Ng HQA, Kwah JS, Png E, Bendt AK, Wenk MR, Torta F, Nagarajan N, Common J, Chong YS, Tham EH, Shek LP, Loo EXL, Chambers J, Yew YW, Loh M, Dawson TL.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00652-7	2025
	Periodontal diseases in Thai schoolchildren. Clinical and microbiological observations.	Piwat S, Basic A, Pahumunto N, Teanpaisan R, Dahlen G.	Odontology	10.1007/s10266-023-00817-w	2024
	Influence of oral bacteria on adhesion of Streptococcus mutans and Streptococcus sanguinis to dental materials.	Nabert-Georgi C, Rodloff AC, Jentsch H, Reissmann DR, Schaumann R, Stingu CS.	Clin Exp Dent Res	10.1002/cre2.107	2018
	Physicochemical Evaluation and Antibacterial Activity of Massularia acuminata Herbal Toothpaste	Adeleye OA, Bamiro O, Akpotu M, Adebowale M, Daodu J, Sodeinde MA.	Turk J Pharm Sci	10.4274/tjps.galenos.2020.42966	2021
Phylogeny	The oral microbiome of patients with ischemic stroke predicts their severity and prognosis.	Sun W, Huang S, Yang X, Luo Y, Liu L, Wu D.	Front Immunol	10.3389/fimmu.2023.1171898	2023
	A Review on Microbial Species for Forensic Body Fluid Identification in Healthy and Diseased Humans.	Dass M, Singh Y, Ghai M.	Curr Microbiol	10.1007/s00284-023-03413-x	2023
	The Role of Titanium Particles and Ions in the Pathogenesis of Peri-Implantitis.	Asa'ad F, Thomsen P, Kunrath MF.	J Bone Metab	10.11005/jbm.2022.29.3.145	2022
	Oral microbiome changes associated with the menstrual cycle in healthy young adult females.	Yamazaki A, Ogura K, Minami K, Ogai K, Horiguchi T, Okamoto S, Mukai K.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1119602	2023
	Chemical composition, cytotoxic, and antibacterial activity of the essential oil from Eugenia calycina Cambess. leaves against oral bacteria	Sousa RMF, de Morais SAL, Vieira RBK, Napolitano DR, Guzman VB, Moraes TS, Cunha LCS, Martins CHG, Chang R, de Aquino FJT, do Nascimento EA, de Oliveira A.	Industrial crops and products.	10.1016/j.indcrop.2014.11.050	2015
	Evidence and Therapeutic Perspectives in the Relationship between the Oral Microbiome and Alzheimer's Disease: A Systematic Review.	Maitre Y, Mahalli R, Micheneau P, Delpierre A, Amador G, Denis F.	Int J Environ Res Public Health	10.3390/ijerph182111157	2021
Enzymology	Confocal Raman microscopy to identify bacteria in oral subgingival biofilm models.	Kriem LS, Wright K, Ccahuana-Vasquez RA, Rupp S.	PLoS One	10.1371/journal.pone.0232912	2020
Phylogeny	Detection of eight periodontal microorganisms and distribution of Porphyromonas gingivalis fimA genotypes in Chinese patients with aggressive periodontitis.	Feng X, Zhang L, Xu L, Meng H, Lu R, Chen Z, Shi D, Wang X.	J Periodontol	10.1902/jop.2013.120677	2014
	Correlation between Transforming Growth Factor-beta and Periapical Lesions in Patients with Chronic Apical Periodontitis.	Li X, Han X, Yu W, Chen X, Wu Y, Lu L.	J Healthc Eng	10.1155/2022/2173434	2022
	Oral Microbiota Profile in Patients with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis.	Esberg A, Johansson L, Berglin E, Mohammad AJ, Jonsson AP, Dahlqvist J, Stegmayr B, Johansson I, Rantapaa-Dahlqvist S.	Microorganisms	10.3390/microorganisms10081572	2022
Enzymology	Occurrence of periodontal pathogens in ethnic groups from a native Brazilian reservation.	Gaetti-Jardim E, Pereira MF, Vieira EM, Schweitzer CM, Okamoto AC, Avila-Campos MJ.	Arch Oral Biol	10.1016/j.archoralbio.2015.01.002	2015
	[Comparison Study of Oropharyngeal Microbiota in Case of Bronchial Asthma and Chronic Obstructive Pulmonary Disease in Different Severity Levels].	Ogorodova LM, Fedosenko SV, Popenko AS, Petrov VA, Tyakht AV, Saltykova IV, Deev IA, Kulikov ES, Kirillova NA, Govorun VM, Kostryukova ES.	Vestn Ross Akad Med Nauk	10.15690/vramn532	2015
	Taxonomic abundance in primary and secondary root canal infections.	Ordinola-Zapata R, Costalonga M, Nixdorf D, Dietz M, Schuweiler D, Lima BP, Staley C.	Int Endod J	10.1111/iej.13864	2023
	The bacterial species profiles of the lingual and salivary microbiota differ with basic tastes sensitivity in human.	Licandro H, Truntzer C, Fromentin S, Morabito C, Quinquis B, Pons N, Martin C, Blottiere HM, Neyraud E.	Sci Rep	10.1038/s41598-023-47636-1	2023
	Association of Herpesvirus and Periodontitis: A Clinical and Laboratorial Case-Control Study.	Picolo M, de Araujo Nobre MA, Salvado F, Barroso H.	Eur J Dent	10.1055/s-0043-1761423	2023
	The impact of fixed orthodontic appliances on oral microbiome dynamics in Japanese patients.	Kado I, Hisatsune J, Tsuruda K, Tanimoto K, Sugai M.	Sci Rep	10.1038/s41598-020-78971-2	2020
Pathogenicity	Macrophage cell activation with acute apical abscess contents determined by interleukin-1 Beta and tumor necrosis factor alpha production.	Sousa EL, Martinho FC, Leite FR, Nascimento GG, Gomes BP.	J Endod	10.1016/j.joen.2014.06.019	2014
	The effect of blue light on periodontal biofilm growth in vitro.	Fontana CR, Song X, Polymeri A, Goodson JM, Wang X, Soukos NS.	Lasers Med Sci	10.1007/s10103-015-1724-7	2015
	Oral Microbiome as a Tool of Systemic Disease on Cleft Patients: A New Landscape.	Arboleda V, Elsouri KN, Heiser SE, Bernal I, Kesselman MM, Demory Beckler M.	Cureus	10.7759/cureus.35444	2023
Phylogeny	Tumour microbiota structure predicts hypopharyngeal carcinoma recurrence and metastasis.	Yuan X, Lau HC, Shen Y, Huang Q, Huang H, Zhang M, Tao L, Hsueh CY, Gong H, Zhou L.	J Oral Microbiol	10.1080/20002297.2022.2146378	2023
	Oral Microbial Signature of Rheumatoid Arthritis in Female Patients.	Kozhakhmetov S, Babenko D, Issilbayeva A, Nurgaziyev M, Kozhakhmetova S, Meiramova A, Akhmetova Z, Kunz J, Ainabekova B, Marotta F, Kushugulova A.	J Clin Med	10.3390/jcm12113694	2023
	Oral microbiome associated with differential ratios of Porphyromonas gingivalis and Streptococcus cristatus.	Wang Q, Wang B-Y, Pratap S, Xie H.	Microbiol Spectr	10.1128/spectrum.03482-23	2024
Phylogeny	Suppuration-associated bacteria in patients with chronic and aggressive periodontitis.	Silva-Boghossian CM, Neves AB, Resende FA, Colombo AP.	J Periodontol	10.1902/jop.2013.120639	2013
	Evaluation of Association of Oral Bacterial Profile with HBV and HCV Infection and T Lymphocyte Level in HIV-Positive Patients.	Lavaee F, Modarresi F, Amookhteh S, Amiri MA.	Int J Dent	10.1155/2022/8622181	2022
Enzymology	Prevotella nigrescens and Porphyromonas gingivalis are associated with signs of carotid atherosclerosis in subjects with and without periodontitis.	Yakob M, Soder B, Meurman JH, Jogestrand T, Nowak J, Soder PO.	J Periodontal Res	10.1111/j.1600-0765.2011.01398.x	2011
	Risk Assessment of Cnm-Positive Streptococcus mutans in Stroke Survivors (RAMESSES): Protocol for a Multicenter Prospective Cohort Study.	Hosoki S, Hattori Y, Saito S, Takegami M, Tonomura S, Yamamoto Y, Ikeda S, Hosomi N, Oishi N, Morita Y, Miyamoto Y, Nomura R, Nakano K, Ihara M.	Front Neurol	10.3389/fneur.2022.816147	2022
	Comparison of endotoxin levels found in primary and secondary endodontic infections.	Gomes BP, Endo MS, Martinho FC.	J Endod	10.1016/j.joen.2012.04.021	2012
	Evaluation of the antibacterial activity of cinnamon essential oil and its individual compounds on Aggregatibacter actinomycetemcomitans isolated from black extrinsic tooth stain: an in vitro study.	Lotfy WA, Matar MA, Alkersh BM.	Eur Arch Paediatr Dent	10.1007/s40368-023-00841-y	2023
Pathogenicity	Antibacterial activity of Pinus elliottii against anaerobic bacteria present in primary endodontic infections.	Caetano da Silva SD, Mendes de Souza MG, Oliveira Cardoso MJ, da Silva Moraes T, Ambrosio SR, Sola Veneziani RC, Martins CH.	Anaerobe	10.1016/j.anaerobe.2014.09.013	2014
	Microbial Leakage through Three Different Implant-Abutment Interfaces on Morse Taper Implants In Vitro.	Ribeiro RF, Mata VBD, Tomaselli LO, Simionato AA, Santos ES, Faria ACL, Rodrigues RCS, do Nascimento C.	Dent J (Basel)	10.3390/dj12070226	2024
	Using whole-genome sequencing (WGS) to plot colorectal cancer-related gut microbiota in a population with varied geography.	Shuwen H, Yinhang W, Xingming Z, Jing Z, Jinxin L, Wei W, Kefeng D.	Gut Pathog	10.1186/s13099-022-00524-x	2022
	MMP-9 Levels in the Gingival Crevicular Fluid of Chilean Rosacea Patients.	Fernandez J, Jimenez C, Benadof D, Morales P, Astorga J, Caceres F, Hernandez M, Fernandez A, Valenzuela F.	Int J Mol Sci	10.3390/ijms23179858	2022
	Efficacy of probiotics in the management of halitosis: a systematic review and meta-analysis.	Huang N, Li J, Qiao X, Wu Y, Liu Y, Wu C, Li L.	BMJ Open	10.1136/bmjopen-2022-060753	2022
	Adjunctive Effect of Green Tea Mouthwash Prepared at Different Steeping Temperatures on Gingivitis: A Triple-Blind Randomized Controlled Clinical Trial.	Fadel HT, AlRehaili AM, AlShanqiti MM, Alraddadi AA, Albolowi AM.	Dent J (Basel)	10.3390/dj9120139	2021
Enzymology	Distribution of periodontopathic bacterial species in dogs and their owners.	Yamasaki Y, Nomura R, Nakano K, Naka S, Matsumoto-Nakano M, Asai F, Ooshima T.	Arch Oral Biol	10.1016/j.archoralbio.2012.02.015	2012
Transcriptome	Placental TLR recognition of salivary and subgingival microbiota is associated with pregnancy complications.	Pax K, Buduneli N, Alan M, Meric P, Gurlek O, Dabdoub SM, Kumar PS.	Microbiome	10.1186/s40168-024-01761-9	2024
Enzymology	Microbial profile of root canals of primary teeth with pulp necrosis and periradicular lesion.	Triches TC, de Figueiredo LC, Feres M, de Freitas SF, Zimmermann GS, Cordeiro MM.	J Dent Child (Chic)		2014
	Detection of periodontal pathogens in the patients with aortic aneurysm.	Ding F, Lyu Y, Han X, Zhang H, Liu D, Hei W, Liu Y.	Chin Med J (Engl)	10.3760/cma.j.issn.0366-6999.20141208	2014
	Surface properties of titanium and zirconia dental implant materials and their effect on bacterial adhesion.	Al-Radha AS, Dymock D, Younes C, O'Sullivan D.	J Dent	10.1016/j.jdent.2011.12.006	2012
	Microbiological Investigation in Teeth with Persistent/Secondary Endodontic Infection in Different Stages of Root Canal Retreatment.	Barbosa-Ribeiro M, Arruda-Vasconcelos R, Mendes Louzada L, Rodrigues Lima A, Marciano M, Affonso de Almeida JF, De-Jesus-Soares A, Zaia AA, Ferraz C, Gomes BP.	Eur Endod J	10.14744/eej.2020.73626	2020
Pathogenicity	Antimicrobial activity of isothiocyanates (ITCs) extracted from horseradish (Armoracia rusticana) root against oral microorganisms.	Park HW, Choi KD, Shin IS.	Biocontrol Sci	10.4265/bio.18.163	2013
Enzymology	Clinical investigation of bacterial species and endotoxin in endodontic infection and evaluation of root canal content activity against macrophages by cytokine production.	Martinho FC, Leite FR, Nascimento GG, Cirelli JA, Gomes BP.	Clin Oral Investig	10.1007/s00784-014-1198-1	2014
	A genetic association study reveals the relationship between the oral microbiome and anxiety and depression symptoms.	Li C, Chen Y, Wen Y, Jia Y, Cheng S, Liu L, Zhang H, Pan C, Zhang J, Zhang Z, Yang X, Meng P, Yao Y, Zhang F.	Front Psychiatry	10.3389/fpsyt.2022.960756	2022
	Orthodontic appliances did not increase risk of dental caries and periodontal disease under preventive protocol.	Bergamo AZN, de Oliveira KMH, Matsumoto MAN, Nascimento CD, Romano FL, da Silva RAB, da Silva LAB, Nelson-Filho P.	Angle Orthod	10.2319/022118-139.1	2019
Phylogeny	Clustering behavior in microbial communities from acute endodontic infections.	Montagner F, Jacinto RC, Signoretti FG, Sanches PF, Gomes BP.	J Endod	10.1016/j.joen.2011.09.029	2012
	Subgingival Microbiome in Pregnancy and a Potential Relationship to Early Term Birth.	Yang I, Claussen H, Arthur RA, Hertzberg VS, Geurs N, Corwin EJ, Dunlop AL.	Front Cell Infect Microbiol	10.3389/fcimb.2022.873683	2022
	Sarecycline Demonstrated Reduced Activity Compared to Minocycline against Microbial Species Representing Human Gastrointestinal Microbiota.	Ghannoum MA, Long L, Bunick CG, Del Rosso JQ, Gamal A, Tyring SK, McCormick TS, Grada A.	Antibiotics (Basel)	10.3390/antibiotics11030324	2022
	Calibrated interdental brushing for the prevention of periodontal pathogens infection in young adults - a randomized controlled clinical trial.	Bourgeois D, Bravo M, Llodra JC, Inquimbert C, Viennot S, Dussart C, Carrouel F.	Sci Rep	10.1038/s41598-019-51938-8	2019
	Culture-based identification of pigmented Porphyromonas and Prevotella species in primary endodontic infections.	Rajaram A, Kotrashetti VS, Somannavar PD, Ingalagi P, Bhat K.	J Dent Res Dent Clin Dent Prospects	10.15171/joddd.2016.022	2016
Phenotype	Upper respiratory tract microbiota is associated with small airway function and asthma severity.	Li Y, Zou C, Li J, Wang W, Guo Y, Zhao L, Jiang C, Zhao P, An X.	BMC Microbiol	10.1186/s12866-023-02757-5	2023
	Prevalence, General and Periodontal Risk Factors of Gastroesophageal Reflux Disease in China.	Liu Z, Gao X, Liang L, Zhou X, Han X, Yang T, Huang K, Lin Y, Deng S, Wang Z, Wang C.	J Inflamm Res	10.2147/jir.s395777	2023
	Açaí (Euterpe oleracea Mart.) Attenuates Oxidative Stress and Alveolar Bone Damage in Experimental Periodontitis in Rats.	Dos Santos VRN, Frazao DR, Ferreira RO, Mendes PFS, Baia-da-Silva DC, Souza-Monteiro D, Bittencourt LO, de Moura JDM, Perdigao JM, Teixeira BJB, Varela ELP, Balbinot GS, Percario S, Rogez H, Rosing CK, Collares FM, Lima RR.	Antioxidants (Basel)	10.3390/antiox11101902	2022
	Traditional Chinese medicine improved diabetic kidney disease through targeting gut microbiota.	Wu XQ, Zhao L, Zhao YL, He XY, Zou L, Zhao YY, Li X.	Pharm Biol	10.1080/13880209.2024.2351946	2024
	Molecular analyses of two bacterial sampling methods in ligature-induced periodontitis in rats.	Fontana CR, Grecco C, Bagnato VS, de Freitas LM, Boussios CI, Soukos NS.	Clin Exp Dent Res	10.1002/cre2.98	2018
	Screening and Assessment of Antimicrobial Susceptibility of Periodontopathic Bacteria in Peruvian Patients with Periodontitis: A Pilot Study.	Aguilar-Luis MA, Casas Apayco L, Tinco Valdez C, De Lama-Odria MDC, Weilg C, Mazulis F, Silva-Caso WG, Del Valle-Mendoza JM.	Int J Dent	10.1155/2021/2695793	2021
Enzymology	An investigation of the presence of specific anaerobic species in necrotic primary teeth.	Gomes GB, Sarkis-Onofre R, Bonow ML, Etges A, Jacinto RC.	Braz Oral Res	10.1590/s1806-83242013000100020	2013
	Serum IgG titers to periodontal pathogens predict 3-month outcome in ischemic stroke patients.	Aoki S, Hosomi N, Nishi H, Nakamori M, Nezu T, Shiga Y, Kinoshita N, Ueno H, Ishikawa K, Imamura E, Shintani T, Ohge H, Kawaguchi H, Kurihara H, Maruyama H.	PLoS One	10.1371/journal.pone.0237185	2020
	Tumor-Associated Microbiota in Esophageal Squamous Cell Carcinoma.	Yang W, Chen CH, Jia M, Xing X, Gao L, Tsai HT, Zhang Z, Liu Z, Zeng B, Yeung SJ, Lee MH, Cheng C.	Front Cell Dev Biol	10.3389/fcell.2021.641270	2021
	In Vitro Studies of Graphene for Management of Dental Caries and Periodontal Disease: A Concise Review.	Nizami MZI, Yin IX, Lung CYK, Niu JY, Mei ML, Chu CH.	Pharmaceutics	10.3390/pharmaceutics14101997	2022
	Does Streptococcus Salivarius Strain M18 Assumption Make Black Stains Disappear in Children?	Bardellini E, Amadori F, Gobbi E, Ferri A, Conti G, Majorana A.	Oral Health Prev Dent	10.3290/j.ohpd.a43359	2020
Genetics	Metagenomic analysis of healthy and diseased peri-implant microbiome under different periodontal conditions: a cross-sectional study.	Song L, Feng Z, Zhou Q, Wu X, Zhang L, Sun Y, Li R, Chen H, Yang F, Yu Y.	BMC Oral Health	10.1186/s12903-023-03442-9	2024
	Red complex: Polymicrobial conglomerate in oral flora: A review.	Mohanty R, Asopa SJ, Joseph MD, Singh B, Rajguru JP, Saidath K, Sharma U.	J Family Med Prim Care	10.4103/jfmpc.jfmpc_759_19	2019
	Clinical, microbiological, and immunological evaluation of patients in corrective orthodontic treatment.	Shirozaki MU, da Silva RAB, Romano FL, da Silva LAB, De Rossi A, Lucisano MP, Messora MR, Feres M, Novaes Junior AB.	Prog Orthod	10.1186/s40510-020-00307-7	2020
	The Dental-BIOfilm Detection TECHnique (D-BioTECH): A Proof of Concept of a Patient-Based Oral Hygiene.	Grassi R, Nardi GM, Mazur M, Di Giorgio R, Ottolenghi L, Guerra F.	Medicina (Kaunas)	10.3390/medicina58040537	2022
	The identification of genes specific to Prevotella intermedia and Prevotella nigrescens using genomic subtractive hybridization.	Masakiyo Y, Yoshida A, Shintani Y, Takahashi Y, Ansai T, Takehara T.	Anaerobe	10.1016/j.anaerobe.2009.11.003	2010
	Detection and enumeration of periodontopathogenic bacteria in subgingival biofilm of pregnant women.	Machado FC, Cesar DE, Assis AV, Diniz CG, Ribeiro RA.	Braz Oral Res	10.1590/s1806-83242012000500011	2012
	Periodontal pathogens directly promote autoimmune experimental arthritis by inducing a TLR2- and IL-1-driven Th17 response.	de Aquino SG, Abdollahi-Roodsaz S, Koenders MI, van de Loo FA, Pruijn GJ, Marijnissen RJ, Walgreen B, Helsen MM, van den Bersselaar LA, de Molon RS, Avila Campos MJ, Cunha FQ, Cirelli JA, van den Berg WB.	J Immunol	10.4049/jimmunol.1301970	2014
	The Influence of Orthodontic Treatment on Periodontal Health between Challenge and Synergy: A Narrative Review.	Luchian I, Surlari Z, Goriuc A, Ioanid N, Zetu I, Butnaru O, Scutariu MM, Tatarciuc M, Budala DG.	Dent J (Basel)	10.3390/dj12040112	2024
	Dysbiotic oral microbiota contributes to alveolar bone loss associated with obesity in mice.	Chaves IM, Zicker MC, Laranjeira AO, Silveira ALM, Aguiar DC, Barrioni BR, Ferreira AVM, Teixeira MM, Silva TAD, Souza DDG, Madeira MFM.	J Appl Oral Sci	10.1590/1678-7757-2022-0238	2022
	Efficacy of Sea Salt-Based Mouthwash and Xylitol in Improving Oral Hygiene among Adolescent Population: A Pilot Study.	Ballini A, Cantore S, Signorini L, Saini R, Scacco S, Gnoni A, Inchingolo AD, De Vito D, Santacroce L, Inchingolo F, Dipalma G.	Int J Environ Res Public Health	10.3390/ijerph18010044	2020
Pathogenicity	Butyric acid induces apoptosis in both human monocytes and lymphocytes equivalently.	Abe K.	J Oral Sci	10.2334/josnusd.54.7	2012
	The Roles of Periodontal Bacteria in Atherosclerosis.	Huang X, Xie M, Lu X, Mei F, Song W, Liu Y, Chen L.	Int J Mol Sci	10.3390/ijms241612861	2023
	Photobleaching of red fluorescence in oral biofilms.	Hope CK, de Josselin de Jong E, Field MR, Valappil SP, Higham SM.	J Periodontal Res	10.1111/j.1600-0765.2010.01334.x	2011
	The association between black stain and lower risk of dental caries in children: a systematic review and meta-analysis.	Mousa HRF, Radwan MZ, Wassif GOM, Wassel MO.	J Egypt Public Health Assoc	10.1186/s42506-022-00107-3	2022
Phylogeny	The association between detectable plasmatic human immunodeficiency virus (HIV) viral load and different subgingival microorganisms in Brazilian adults with HIV: a multilevel analysis.	Pereira VT, Pavan P, Souza RC, Souto R, Vettore MV, Torres SR, Colombo AP, de Uzeda M, Sansone C, Goncalves LS.	J Periodontol	10.1902/jop.2013.130273	2014
	Drug Carriers Based on Graphene Oxide and Hydrogel: Opportunities and Challenges in Infection Control Tested by Amoxicillin Release.	Trusek A, Kijak E.	Materials (Basel)	10.3390/ma14123182	2021
	Periodontal and Other Oral Bacteria and Risk of Lung Cancer in the Atherosclerosis Risk in Communities (ARIC) Study.	Zhou B, Lu J, Beck JD, Moss KL, Prizment AE, Demmer RT, Porosnicu Rodriguez KA, Joshu CE, Michaud DS, Platz EA.	Cancer Epidemiol Biomarkers Prev	10.1158/1055-9965.epi-22-0601	2023
Enzymology	Effect of teenage smoking on the prevalence of periodontal bacteria.	Heikkinen AM, Pitkaniemi J, Kari K, Pajukanta R, Elonheimo O, Koskenvuo M, Meurman JH.	Clin Oral Investig	10.1007/s00784-011-0521-3	2012
Phylogeny	Salivary microbial changes during the first 6 months of orthodontic treatment.	Zhao M, Liu M, Chen W, Zhang H, Bai Y, Ren W.	PeerJ	10.7717/peerj.10446	2020
	Multiplex Imaging of Polymicrobial Communities-Murine Models to Study Oral Microbiome Interactions.	Kreth J, Abdelrahman YM, Merritt J.	Methods Mol Biol	10.1007/978-1-4939-9940-8_8	2020
	Oral bacteria in infective endocarditis requiring surgery: a retrospective analysis of 134 patients.	Deppe H, Reitberger J, Behr AV, Vitanova K, Lange R, Wantia N, Wagenpfeil S, Sculean A, Ritschl LM.	Clin Oral Investig	10.1007/s00784-022-04465-2	2022
Phylogeny	Necrotizing Gingivitis: Microbial Diversity and Quantification of Protein Secretion in Necrotizing Gingivitis.	Gerhard N, Thurnheer T, Kreutzer S, Gmur RD, Attin T, Russo G, Karygianni L.	Antibiotics (Basel)	10.3390/antibiotics10101197	2021
	Microbiological, lipid and immunological profiles in children with gingivitis and type 1 diabetes mellitus.	Duque C, Joao MF, Camargo GA, Teixeira GS, Machado TS, Azevedo RS, Mariano FS, Colombo NH, Vizoto NL, Mattos-Graner RO.	J Appl Oral Sci	10.1590/1678-77572016-0196	2017
Genetics	Metagenomic Analysis of Saliva Reveals Disease-Associated Microbiotas in Patients With Periodontitis and Crohn's Disease-Associated Periodontitis.	Sun B, Liu B, Gao X, Xing K, Xie L, Guo T.	Front Cell Infect Microbiol	10.3389/fcimb.2021.719411	2021
Pathogenicity	Three metronidazole-resistant Prevotella bivia strains harbour a mobile element, encoding a novel nim gene, nimK, and an efflux small MDR transporter.	Veloo ACM, Chlebowicz M, Winter HLJ, Bathoorn D, Rossen JWA.	J Antimicrob Chemother	10.1093/jac/dky236	2018
	The gene coding for nigrescin produced by Prevotella nigrescens ATCC 25261.	Teanpaisan R, Narawatthana S, Utarabhand P.	Lett Appl Microbiol	10.1111/j.1472-765x.2009.02657.x	2009
Pathogenicity	Competition between yogurt probiotics and periodontal pathogens in vitro.	Zhu Y, Xiao L, Shen D, Hao Y.	Acta Odontol Scand	10.3109/00016357.2010.492235	2010
Pathogenicity	Biomarker Expression of Peri-Implantitis Lesions before and after Treatment: A Systematic Review.	Moaven H, Giacaman A, Beltran V, Sam YH, Betancur D, Mainas G, Tarjomani SA, Donos N, Sousa V.	Int J Environ Res Public Health	10.3390/ijerph192114085	2022
Enzymology	Subgingival Microbiota of Mexicans with Type 2 Diabetes with Different Periodontal and Metabolic Conditions.	Rodriguez-Hernandez AP, Marquez-Corona ML, Pontigo-Loyola AP, Medina-Solis CE, Ximenez-Fyvie LA.	Int J Environ Res Public Health	10.3390/ijerph16173184	2019
	Repeated irradiation by light-emitting diodes may impede the spontaneous progression of experimental periodontitis: a preclinical study.	Suh H, Lee J, Ahn SH, Song W, Li L, Lee YM, Seol YJ, Koo KT.	J Periodontal Implant Sci	10.5051/jpis.2202320116	2023
	A microbiological profile of unexposed and exposed pulp space of primary endodontic infections by checkerboard DNA-DNA hybridization.	Sassone LM, Fidel RA, Faveri M, Figueiredo L, Fidel SR, Feres M.	J Endod	10.1016/j.joen.2012.03.021	2012
Pathogenicity	Mucositis and Infection in Hematology Patients.	Blijlevens NMA, de Mooij CEM.	Int J Mol Sci	10.3390/ijms24119592	2023
Pathogenicity	Bactericidal Activity of Silver Nanoparticles on Oral Biofilms Related to Patients with and without Periodontal Disease.	Hernandez-Venegas PA, Martinez-Martinez RE, Zaragoza-Contreras EA, Dominguez-Perez RA, Reyes-Lopez SY, Donohue-Cornejo A, Cuevas-Gonzalez JC, Molina-Frechero N, Espinosa-Cristobal LF.	J Funct Biomater	10.3390/jfb14060311	2023
	A microbiological study in relation to the presence of caries and calculus.	Dahlen G, Konradsson K, Eriksson S, Teanpaisan R, Piwat S, Carlen A.	Acta Odontol Scand	10.3109/00016351003745514	2010
Pathogenicity	Bactericidal activity of stabilized chlorine dioxide as an endodontic irrigant in a polymicrobial biofilm tooth model system.	Lundstrom JR, Williamson AE, Villhauer AL, Dawson DV, Drake DR.	J Endod	10.1016/j.joen.2010.08.032	2010
	Relationship of Salivary Microbiome with the Worsening of the Periodontal Health Status in Young Adults: A 3-Year Cohort Study.	Islam MM, Ekuni D, Toyama N, Kobayashi T, Fujimori K, Uchida Y, Fukuhara D, Taniguchi-Tabata A, Kataoka K, Iwasaki Y, Morita M.	Int J Environ Res Public Health	10.3390/ijerph17051764	2020
Pathogenicity	Antibacterial effects of MDPB against anaerobes associated with endodontic infections.	Izutani N, Imazato S, Noiri Y, Ebisu S.	Int Endod J	10.1111/j.1365-2591.2010.01716.x	2010
	16S ribosomal RNA identification of Prevotella nigrescens from a case of cellulitis.	Yang JJ, Kwon TY, Seo MJ, Nam YS, Han CS, Lee HJ.	Ann Lab Med	10.3343/alm.2013.33.5.379	2013
	The oral microbiota is a reservoir for antimicrobial resistance: resistome and phenotypic resistance characteristics of oral biofilm in health, caries, and periodontitis.	Anderson AC, von Ohle C, Frese C, Boutin S, Bridson C, Schoilew K, Peikert SA, Hellwig E, Pelz K, Wittmer A, Wolff D, Al-Ahmad A.	Ann Clin Microbiol Antimicrob	10.1186/s12941-023-00585-z	2023
Phylogeny	Fluorescence lectin binding analysis of carbohydrate components in dental biofilms grown in situ in the presence or absence of sucrose.	Dige I, Paque PN, Del Rey YC, Lund MB, Schramm A, Schlafer S.	Mol Oral Microbiol	10.1111/omi.12384	2022
Genetics	Genomic and phenotypic comparison of Prevotella intermedia strains possessing different virulence in vivo.	Kwack KH, Jang EY, Yang SB, Lee JH, Moon JH.	Virulence	10.1080/21505594.2022.2095718	2022
Enzymology	Prevalence of periodontal bacteria in saliva of Kuwaiti children at different age groups.	Rotimi VO, Salako NO, Divia M, Asfour L, Kononen E.	J Infect Public Health	10.1016/j.jiph.2010.02.002	2010
	Smoking-induced subgingival dysbiosis precedes clinical signs of periodontal disease.	Tamashiro R, Strange L, Schnackenberg K, Santos J, Gadalla H, Zhao L, Li EC, Hill E, Hill B, Sidhu GS, Kirst M, Walker C, Wang GP.	Sci Rep	10.1038/s41598-023-30203-z	2023
Metabolism	Quantification of cultivable bacteria and endotoxin in post-treatment apical periodontitis before and after chemo-mechanical preparation.	Endo MS, Martinho FC, Zaia AA, Ferraz CC, Almeida JF, Gomes BP.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-012-1598-6	2012
Metabolism	Extracellular deoxyribonuclease production by periodontal bacteria.	Palmer LJ, Chapple IL, Wright HJ, Roberts A, Cooper PR.	J Periodontal Res	10.1111/j.1600-0765.2011.01451.x	2012
	The activation of matrix metalloproteinases by a whole-cell extract from Prevotella nigrescens.	Itoh T, Nakamura H, Kishi J, Hayakawa T.	J Endod	10.1016/j.joen.2008.09.012	2009
Pathogenicity	Specific Anti-biofilm Activity of Carbon Quantum Dots by Destroying P. gingivalis Biofilm Related Genes.	Liang G, Shi H, Qi Y, Li J, Jing A, Liu Q, Feng W, Li G, Gao S.	Int J Nanomedicine	10.2147/ijn.s253416	2020
	Efficacy of amoxicillin and metronidazole combination for the management of generalized aggressive periodontitis.	Yek EC, Cintan S, Topcuoglu N, Kulekci G, Issever H, Kantarci A.	J Periodontol	10.1902/jop.2010.090522	2010
Metabolism	Proteome Analysis of Molecular Events in Oral Pathogenesis and Virus: A Review with a Particular Focus on Periodontitis.	Tsuchida S.	Int J Mol Sci	10.3390/ijms21155184	2020
Genetics	Potential of Bifidobacterium lactis IDCC 4301 isolated from breast milk-fed infant feces as a probiotic and functional ingredient.	Ban OH, Bang WY, Jeon HJ, Jung YH, Yang J, Kim DH.	Food Sci Nutr	10.1002/fsn3.3230	2023
	Synergy in biofilm formation between Fusobacterium nucleatum and Prevotella species.	Okuda T, Kokubu E, Kawana T, Saito A, Okuda K, Ishihara K.	Anaerobe	10.1016/j.anaerobe.2011.09.003	2012
Genetics	Subgingival microbiota from Cebus apella (capuchin monkey) with different periodontal conditions.	Gaetti-Jardim E, Monti LM, Nicolas Ciesielski FI, Gaetti-Jardim EC, Okamoto AC, Schweitzer CM, Avila-Campos MJ.	Anaerobe	10.1016/j.anaerobe.2012.02.002	2012
	Antigenicity of primary endodontic infection against macrophages by the levels of PGE(2) production.	Martinho FC, Chiesa WM, Leite FR, Cirelli JA, Gomes BP.	J Endod	10.1016/j.joen.2010.12.005	2011
Enzymology	Denaturing gradient gel electrophoresis analysis with different primers of subgingival bacterial communities under mechanical debridement.	Liu D, Zhou Y, Li C, Li Y, Jiang Y, Huang Z, Liang J, Shu R.	Microbiol Immunol	10.1111/j.1348-0421.2010.00261.x	2010
	Bacterial and Candida albicans adhesion on different root canal filling materials and sealers.	Senges C, Wrbas KT, Altenburger M, Follo M, Spitzmuller B, Wittmer A, Hellwig E, Al-Ahmad A.	J Endod	10.1016/j.joen.2011.05.034	2011
Enzymology	[Effect of periodontal mechanical treatment on periodontal pathogenic bacteria in gingival crevicular fluid of chronic periodontitis patients].	Ding F, Meng HX, Li QQ, Zhao YB, Feng XH, Zhang L.	Beijing Da Xue Xue Bao Yi Xue Ban		2010
	Bacterial Identification and Monitoring Around Two-Piece Dental Implants by Matrix-Assisted Laser Desorption Ionization Time of Flight Mass Spectrometry (MALDI-TOF MS).	Saha S, Meenawat A, Sahu C, Srivastava V, Yadav S, Kumar V.	J Lab Physicians	10.1055/s-0040-1714934	2020
Pathogenicity	Prevalence of Periodontal Pathogens in Slovak Patients with Periodontitis and Their Possible Aspect of Transmission from Companion Animals to Humans.	Sondorova M, Kucera J, Kacirova J, Krchova Nagyova Z, Surin Hudakova N, Liptak T, Madar M.	Biology (Basel)	10.3390/biology11101529	2022
	Probing the oral-brain connection: oral microbiome patterns in a large community cohort with anxiety, depression, and trauma symptoms, and periodontal outcomes.	Malan-Muller S, Vidal R, O'Shea E, Montero E, Figuero E, Zorrilla I, de Diego-Adelino J, Cano M, Garcia-Portilla MP, Gonzalez-Pinto A, Leza JC.	Transl Psychiatry	10.1038/s41398-024-03122-4	2024
	A systematic review on the implication of Candida in peri-implantitis.	Lafuente-Ibanez de Mendoza I, Cayero-Garay A, Quindos-Andres G, Aguirre-Urizar JM.	Int J Implant Dent	10.1186/s40729-021-00338-7	2021
	Does the frequency of Prevotella intermedia increase during pregnancy?	Gursoy M, Haraldsson G, Hyvonen M, Sorsa T, Pajukanta R, Kononen E.	Oral Microbiol Immunol	10.1111/j.1399-302x.2009.00509.x	2009
	Association between Appendicitis and Incident Systemic Sclerosis.	Yang KT, Wei JC, Chang R, Lin CC, Chen HH.	J Clin Med	10.3390/jcm10112337	2021
Phylogeny	Microbiologic changes in subgingival plaque after removal of fixed orthodontic appliances.	Choi DS, Cha BK, Jost-Brinkmann PG, Lee SY, Chang BS, Jang I, Song JS.	Angle Orthod	10.2319/111808-593r.1	2009
	Factors causing oral and skin pathological features in the hyperimmunoglobulin E syndrome patient including the environmental component: a review of the literature and own experience.	Gerreth K, Szczawinska-Poplonyk A, Kycler Z, Adamski Z, Borysewicz-Lewicka M, Breborowicz A.	Postepy Dermatol Alergol	10.5114/ada.2020.96142	2020
	Prevotella intermedia ATCC 25611 targets host cell lamellipodia in epithelial cell adhesion and invasion.	Gursoy UK, Kononen E, Uitto VJ.	Oral Microbiol Immunol	10.1111/j.1399-302x.2009.00510.x	2009
	Bacterial colonization of a power-driven water flosser during regular use. A proof-of-principle study.	Bertl K, Edlund Johansson P, Bruckmann C, Leonhard M, Davies JR, Stavropoulos A.	Clin Exp Dent Res	10.1002/cre2.393	2021
	A novel promising diagnosis model for colorectal advanced adenoma and carcinoma based on the progressive gut microbiota gene biomarkers.	Xu J, Zheng Z, Yang L, Li R, Ma X, Zhang J, Yin F, Liu L, Xu Q, Shen Q, Shen X, Wu C, Liu J, Qin N, Sheng J, Jin P, Jin P.	Cell Biosci	10.1186/s13578-022-00940-1	2022
	Probiotic Bifidobacteria in Managing Periodontal Disease: A Systematic Review.	Matsubara VH, Fakhruddin KS, Ngo H, Samaranayake LP.	Int Dent J	10.1016/j.identj.2022.11.018	2023
Enzymology	Molecular detection of human periodontal pathogens in oral swab specimens from dogs in Japan.	Kato Y, Shirai M, Murakami M, Mizusawa T, Hagimoto A, Wada K, Nomura R, Nakano K, Ooshima T, Asai F.	J Vet Dent	10.1177/089875641102800204	2011
	Comparison of bacterial adhesion and cellular proliferation on newly developed three-dimensional scaffolds manufactured by rapid prototyping technology.	Al-Ahmad A, Schubert C, Carvalho C, Thoman Y, Wittmer A, Metzger M, Hellwig E, Swieszkowski W, Wiedmann-Al-Ahmad M.	J Biomed Mater Res A	10.1002/jbm.a.33118	2011
Phylogeny	Clustering of subgingival microbial species in adolescents with periodontitis.	Lopez R, Dahlen G, Retamales C, Baelum V.	Eur J Oral Sci	10.1111/j.1600-0722.2011.00808.x	2011
	Focal Infection and Periodontitis: A Narrative Report and New Possible Approaches.	Rocca JP, Fornaini C, Wang Z, Tan L, Merigo E.	Int J Microbiol	10.1155/2020/8875612	2020
	Evaluation of Microflora (Viral and Bacterial) in Subgingival and Placental Samples of Pregnant Women with Preeclampsia with and without Periodontal Disease: A Cross-Sectional Study.	Tanneeru S, Mahendra J, Shaik MV.	J Int Soc Prev Community Dent	10.4103/jispcd.jispcd_341_19	2020
	Nanofibrillated Cellulose-Based Aerogels Functionalized with Tajuva (Maclura tinctoria) Heartwood Extract.	Coldebella R, Gentil M, Berger C, Dalla Costa HW, Pedrazzi C, Labidi J, Delucis RA, Missio AL.	Polymers (Basel)	10.3390/polym13060908	2021
	Increased Risk of Carotid Atherosclerosis in Male Patients with Chronic Periodontitis: A Nationwide Population-Based Retrospective Cohort Study.	Tong C, Wang YH, Chang YC.	Int J Environ Res Public Health	10.3390/ijerph16152635	2019
	Bioinformatic mining for RiPP biosynthetic gene clusters in Bacteroidales reveals possible new subfamily architectures and novel natural products.	Fernandez-Cantos MV, Garcia-Morena D, Yi Y, Liang L, Gomez-Vazquez E, Kuipers OP.	Front Microbiol	10.3389/fmicb.2023.1219272	2023
	Distribution of Helicobacter pylori and Periodontopathic Bacterial Species in the Oral Cavity.	Kadota T, Hamada M, Nomura R, Ogaya Y, Okawa R, Uzawa N, Nakano K.	Biomedicines	10.3390/biomedicines8060161	2020
	The Associations of Periodontopathic Bacteria and Oral Candida with Periodontal Inflamed Surface Area in Older Adults Receiving Supportive Periodontal Therapy.	Shigeishi H, Nakamura M, Oka I, Su CY, Yano K, Ishikawa M, Kaneyasu Y, Sugiyama M, Ohta K.	Diagnostics (Basel)	10.3390/diagnostics11081397	2021
Phylogeny	Bacterial variation in the oral microbiota in multiple sclerosis patients.	Zangeneh Z, Abdi-Ali A, Khamooshian K, Alvandi A, Abiri R.	PLoS One	10.1371/journal.pone.0260384	2021
	Valid and accepted novel bacterial taxa derived from human clinical specimens and taxonomic revisions published in 2022.	Munson E, Carella A, Carroll KC.	J Clin Microbiol	10.1128/jcm.00838-23	2023
Phylogeny	Similarities in the subgingival microbiota assessed by a curet sampling method at sites with chronic periodontitis.	Persson GR, Weibel M, Hirschi R, Katsoulis J.	J Periodontol	10.1902/jop.2008.080142	2008
Phylogeny	Rapid identification of oral anaerobic bacteria cultivated from subgingival biofilm by MALDI-TOF-MS.	Stingu CS, Rodloff AC, Jentsch H, Schaumann R, Eschrich K.	Oral Microbiol Immunol	10.1111/j.1399-302x.2008.00438.x	2008
	Antioxidant therapy (lycopene and green tea extract) in periodontal disease: A promising paradigm.	Tripathi P, Blaggana V, Upadhyay P, Jindal M, Gupta S, Nishat S.	J Indian Soc Periodontol	10.4103/jisp.jisp_277_18	2019
Enzymology	Biofilms of black tooth stains: PCR analysis reveals presence of Streptococcus mutans.	Costa MT, Dorta ML, Ribeiro-Dias F, Pimenta FC.	Braz Dent J	10.1590/s0103-64402012000500014	2012
	The Effectiveness of a Bioactive Healing Abutment as a Local Drug Delivery System to Impact Peri-Implant Mucositis: A Prospective Case Series Study.	Wychowanski P, Nowak M, Miskiewicz A, Morawiec T, Wolinski J, Kucharski Z, Passarelli PC, Bodnarenko A, Lopez MA.	Pharmaceutics	10.3390/pharmaceutics15010138	2022
Enzymology	[Detection of periodental pathogens in atherosclerotic lesions in patients].	An N, Ou-yang XY, Han W.	Beijing Da Xue Xue Bao Yi Xue Ban		2010
Transcriptome	Discrimination of Bacterial Community Structures among Healthy, Gingivitis, and Periodontitis Statuses through Integrated Metatranscriptomic and Network Analyses.	Nemoto T, Shiba T, Komatsu K, Watanabe T, Shimogishi M, Shibasaki M, Koyanagi T, Nagai T, Katagiri S, Takeuchi Y, Iwata T.	mSystems	10.1128/msystems.00886-21	2021
	The relationship of Prevotella intermedia, Prevotella nigrescens and Prevotella melaninogenica in the supragingival plaque of children, caries and oral malodor.	Tanaka S, Yoshida M, Murakami Y, Ogiwara T, Shoji M, Kobayashi S, Watanabe S, Machino M, Fujisawa S.	J Clin Pediatr Dent	10.17796/jcpd.32.3.vp657177815618l1	2008
	Oral microbiota in children with type 1 diabetes mellitus.	Pachonski M, Koczor-Rozmus A, Mocny-Pachonska K, Lanowy P, Mertas A, Jarosz-Chobot P.	Pediatr Endocrinol Diabetes Metab	10.5114/pedm.2021.104343	2021
	Association between involuntary smoking and salivary markers related to periodontitis: a 2-year longitudinal study.	Nishida N, Yamamoto Y, Tanaka M, Kataoka K, Kuboniwa M, Nakayama K, Morimoto K, Shizukuishi S.	J Periodontol	10.1902/jop.2008.080149	2008
	The Effect of Non-Surgical Periodontal Therapy on Subgingival Microbiota: A Systematic Review and Meta-Analysis.	Krajewski A, Perussolo J, Ercal P, Gkranias N, Donos N.	J Periodontal Res	10.1111/jre.13409	2025
	Prevalence of Clinical Periodontitis and Putative Periodontal Pathogens among South Indian Pregnant Women.	Tellapragada C, Eshwara VK, Acharya S, Acharya S, Bhat P, Kamath A, Vishwanath S, Mukhopadhyay C.	Int J Microbiol	10.1155/2014/420149	2014
	Peri-implantitis and extracellular matrix antibodies: A case-control study.	Papi P, Di Carlo S, Rosella D, De Angelis F, Capogreco M, Pompa G.	Eur J Dent	10.4103/ejd.ejd_28_17	2017
Pathogenicity	Changes in the incidence of periodontal pathogens during long-term monitoring and after application of antibacterial drugs.	Janatova T, Najmanova L, Neubauerova L, Kyselkova M, Novotna G, Spizek J, Janata J, Duskova J.	Folia Microbiol (Praha)	10.1007/s12223-009-0060-3	2009
	Characteristics of the salivary microbiota in cheilitis granulomatosa.	Liu Y, Zhang Q, Hu X, Chen F, Hua H.	Med Oral Patol Oral Cir Bucal	10.4317/medoral.23041	2019
	Comparisons of oral, intestinal, and pancreatic bacterial microbiomes in patients with pancreatic cancer and other gastrointestinal diseases.	Chung M, Zhao N, Meier R, Koestler DC, Wu G, de Castillo E, Paster BJ, Charpentier K, Izard J, Kelsey KT, Michaud DS.	J Oral Microbiol	10.1080/20002297.2021.1887680	2021
	The Oral Microbiome and Its Role in Systemic Autoimmune Diseases: A Systematic Review of Big Data Analysis.	Gao L, Cheng Z, Zhu F, Bi C, Shi Q, Chen X.	Front Big Data	10.3389/fdata.2022.927520	2022
Metabolism	Differential Expression of Inflammation-Related Genes in Down Syndrome Patients with or without Periodontal Disease.	Baus-Dominguez M, Gomez-Diaz R, Torres-Lagares D, Corcuera-Flores JR, Ruiz-Villandiego JC, Machuca-Portillo G, Gutierrez-Perez JL, Serrera-Figallo MA.	Mediators Inflamm	10.1155/2019/4567106	2019
	Identifying volatile in vitro biomarkers for oral bacteria with proton-transfer-reaction mass spectrometry and gas chromatography-mass spectrometry.	Roslund K, Lehto M, Pussinen P, Hartonen K, Groop PH, Halonen L, Metsala M.	Sci Rep	10.1038/s41598-021-96287-7	2021
	Microbiota of interdental space of adolescents according to Risk of Caries: A cross-sectional study protocol.	Inquimbert C, Bourgeois D, Giraudeau N, Tramini P, Viennot S, Dussart C, Carrouel F.	Contemp Clin Trials Commun	10.1016/j.conctc.2019.100444	2019
Phylogeny	Microbial profile of ligature-induced periodontitis in rats.	Duarte PM, Tezolin KR, Figueiredo LC, Feres M, Bastos MF.	Arch Oral Biol	10.1016/j.archoralbio.2009.10.006	2010
	Haemophilus pittmaniae and Leptotrichia spp. Constitute a Multi-Marker Signature in a Cohort of Human Papillomavirus-Positive Head and Neck Cancer Patients.	Mougeot JC, Beckman MF, Langdon HC, Lalla RV, Brennan MT, Bahrani Mougeot FK.	Front Microbiol	10.3389/fmicb.2021.794546	2021
Pathogenicity	Oral Prevotella Species and Their Connection to Events of Clinical Relevance in Gastrointestinal and Respiratory Tracts.	Kononen E, Gursoy UK.	Front Microbiol	10.3389/fmicb.2021.798763	2021
Pathogenicity	Commensal bacteria of the lung microbiota synergistically inhibit inflammation in a three-dimensional epithelial cell model.	Goeteyn E, Grassi L, Van den Bossche S, Rigauts C, Vande Weygaerde Y, Van Braeckel E, Maes T, Bracke KR, Crabbe A.	Front Immunol	10.3389/fimmu.2023.1176044	2023
	The efficacy of the adjunct use of subgingival air-polishing therapy with erythritol powder compared to conventional debridement alone during initial non-surgical periodontal therapy.	Divnic-Resnik T, Pradhan H, Spahr A.	J Clin Periodontol	10.1111/jcpe.13623	2022
	Genetic Association with Subgingival Bacterial Colonization in Chronic Periodontitis.	Cavalla F, Biguetti CC, Melchiades JL, Tabanez AP, Azevedo MCS, Trombone APF, Faveri M, Feres M, Garlet GP.	Genes (Basel)	10.3390/genes9060271	2018
	Impact of different oral treatments on the composition of the supragingival plaque microbiome.	Rabe A, Gesell Salazar M, Michalik S, Kocher T, Below H, Volker U, Welk A.	J Oral Microbiol	10.1080/20002297.2022.2138251	2022
	Analysis of the Subgingival Microbiota in Implant-Supported Full-Arch Rehabilitations.	Menini M, Delucchi F, Bagnasco F, Pera F, Di Tullio N, Pesce P.	Dent J (Basel)	10.3390/dj8030104	2020
	Analysis of Plant Origin Antibiotics against Oral Bacterial Infections Using In Vitro and In Silico Techniques and Characterization of Active Constituents.	Rafey A, Amin A, Kamran M, Haroon U, Farooq K, Foubert K, Pieters L.	Antibiotics (Basel)	10.3390/antibiotics10121504	2021
Metabolism	Effect of calcium hydroxide-treated Prevotella nigrescens on the gene expression of matrix metalloproteinase and its inhibitor in MG63 cells.	Yang WK, Kim MR, Lee Y, Son HH, Lee W.	J Endod	10.1016/j.joen.2006.05.002	2006
	Detection of Porphyromonas gingivalis, Porphyromonas endodontalis, Prevotella intermedia, and Prevotella nigrescens in chronic endodontic infection.	Tomazinho LF, Avila-Campos MJ.	Oral Surg Oral Med Oral Pathol Oral Radiol Endod	10.1016/j.tripleo.2006.05.010	2007
	Novel Titanium Nanospike Structure Using Low-Energy Helium Ion Bombardment for the Transgingival Part of a Dental Implant.	Mukaddam K, Astasov-Frauenhoffer M, Fasler-Kan E, Marot L, Kisiel M, Steiner R, Sanchez F, Meyer E, Koser J, Bornstein MM, Kuhl S.	Nanomaterials (Basel)	10.3390/nano12071065	2022
	Evaluation of the microbiota of primary endodontic infections using checkerboard DNA-DNA hybridization.	Sassone L, Fidel R, Figueiredo L, Fidel S, Faveri M, Feres M.	Oral Microbiol Immunol	10.1111/j.1399-302x.2007.00376.x	2007
	Insertional Inactivation and Gene Complementation of Prevotella intermedia Type IX Secretion System Reveals Its Indispensable Roles in Black Pigmentation, Hemagglutination, Protease Activity of Interpain A, and Biofilm Formation.	Naito M, Shoji M, Sato K, Nakayama K.	J Bacteriol	10.1128/jb.00203-22	2022
	The oral bacterial microbiome of occlusal surfaces in children and its association with diet and caries.	Ribeiro AA, Azcarate-Peril MA, Cadenas MB, Butz N, Paster BJ, Chen T, Bair E, Arnold RR.	PLoS One	10.1371/journal.pone.0180621	2017
	Investigating Oral Microbiome Profiles in Children with Cleft Lip and Palate for Prognosis of Alveolar Bone Grafting.	Liu L, Zhang Q, Lin J, Ma L, Zhou Z, He X, Jia Y, Chen F.	PLoS One	10.1371/journal.pone.0155683	2016
	Nisin and Nisin Probiotic Disrupt Oral Pathogenic Biofilms and Restore Their Microbiome Composition towards Healthy Control Levels in a Peri-Implantitis Setting.	Radaic A, Brody H, Contreras F, Hajfathalian M, Lucido L, Kamarajan P, Kapila YL.	Microorganisms	10.3390/microorganisms10071336	2022
Pathogenicity	Periodontal Conditions and Pathogens Associated with Pre-Eclampsia: A Scoping Review.	Gare J, Kanoute A, Meda N, Viennot S, Bourgeois D, Carrouel F.	Int J Environ Res Public Health	10.3390/ijerph18137194	2021
	Assessing Safety and Clinical Effectiveness of New Approaches to Planning and Integrated Implementation of Full-Mouth Reconstruction.	Dzalaeva F, Chikunov S, Utyuzh A, Mikhailova M, Budunova M.	Eur J Dent	10.1055/s-0040-1715989	2021
Pathogenicity	Effects of zinc and copper on adhesion and hemagglutination of Prevotella intermedia and Prevotella nigrescens.	Tamura M, Hirano Y, Koruda K, Kuwata F, Hayashi K.	Oral Microbiol Immunol	10.1111/j.1399-302x.2005.00234.x	2005
	Antimicrobial effect of propolis and other substances against selected endodontic pathogens.	Ferreira FB, Torres SA, Rosa OP, Ferreira CM, Garcia RB, Marcucci MC, Gomes BP.	Oral Surg Oral Med Oral Pathol Oral Radiol Endod	10.1016/j.tripleo.2007.05.019	2007
	Impact of HIV on the Oral Microbiome of Children Living in Sub-Saharan Africa, Determined by Using an rpoC Gene Fragment Metataxonomic Approach.	Mann AE, O'Connell LM, Osagie E, Akhigbe P, Obuekwe O, Omoigberale A, Kelly C, DOMHaIN Study Team, Coker MO, Richards VP.	Microbiol Spectr	10.1128/spectrum.00871-23	2023
	The updates and implications of cutaneous microbiota in acne.	Huang C, Zhuo F, Han B, Li W, Jiang B, Zhang K, Jian X, Chen Z, Li H, Huang H, Dou X, Yu B.	Cell Biosci	10.1186/s13578-023-01072-w	2023
Metabolism	Molecular Characterization and Heterologous Production of the Bacteriocin Peocin, a DNA Starvation/Stationary Phase Protection Protein, from Paenibacillus ehimensis NPUST1.	Tseng CC, Murni L, Han TW, Arfiati D, Shih HT, Hu SY.	Molecules	10.3390/molecules24132516	2019
Pathogenicity	Anti-biofilm properties of Satureja hortensis L. essential oil against periodontal pathogens.	Gursoy UK, Gursoy M, Gursoy OV, Cakmakci L, Kononen E, Uitto VJ.	Anaerobe	10.1016/j.anaerobe.2009.02.004	2009
Phylogeny	Oral Microbiome Alterations and SARS-CoV-2 Saliva Viral Load in Patients with COVID-19.	Miller EH, Annavajhala MK, Chong AM, Park H, Nobel YR, Soroush A, Blackett JW, Krigel A, Phipps MM, Freedberg DE, Zucker J, Sano ED, Uhlemann AC, Abrams JA.	Microbiol Spectr	10.1128/spectrum.00055-21	2021
	Quantitative detection of periodontopathic bacteria in atherosclerotic plaques from coronary arteries.	Gaetti-Jardim E, Marcelino SL, Feitosa ACR, Romito GA, Avila-Campos MJ.	J Med Microbiol	10.1099/jmm.0.013383-0	2009
Enzymology	Domain cross-talk within a bifunctional enzyme provides catalytic and allosteric functionality in the biosynthesis of aromatic amino acids.	Bai Y, Lang EJM, Nazmi AR, Parker EJ.	J Biol Chem	10.1074/jbc.ra118.005220	2019
	Endodontic biofilms: contemporary and future treatment options.	Yoo YJ, Perinpanayagam H, Oh S, Kim AR, Han SH, Kum KY.	Restor Dent Endod	10.5395/rde.2019.44.e7	2019
	Effects of Er:YAG laser irradiation on biofilm-forming bacteria associated with endodontic pathogens in vitro.	Noiri Y, Katsumoto T, Azakami H, Ebisu S.	J Endod	10.1016/j.joen.2008.04.010	2008
Pathogenicity	Lipopolysaccharide from Prevotella nigrescens stimulates osteoclastogenesis in cocultures of bone marrow mononuclear cells and primary osteoblasts.	Chung YH, Chang EJ, Kim SJ, Kim HH, Kim HM, Lee SB, Ko JS.	J Periodontal Res	10.1111/j.1600-0765.2006.00876.x	2006
	Biofilms in Diabetic Foot Ulcers: Significance and Clinical Relevance.	Pouget C, Dunyach-Remy C, Pantel A, Schuldiner S, Sotto A, Lavigne JP.	Microorganisms	10.3390/microorganisms8101580	2020
	Serum IgG titers against periodontal pathogens are associated with cerebral hemorrhage growth and 3-month outcome.	Nakamori M, Hosomi N, Nishi H, Aoki S, Nezu T, Shiga Y, Kinoshita N, Ishikawa K, Imamura E, Shintani T, Ohge H, Kawaguchi H, Kurihara H, Wakabayashi S, Maruyama H.	PLoS One	10.1371/journal.pone.0241205	2020
Phylogeny	Periodontal and oral microbiological status of an adult population undergoing haemodialysis: a cross-sectional study.	Castillo A, Mesa F, Liebana J, Garcia-Martinez O, Ruiz S, Garcia-Valdecasas J, O'Valle F.	Oral Dis	10.1111/j.1601-0825.2006.01267.x	2007
Phylogeny	Increased tooth brushing frequency is associated with reduced gingival pocket bacterial diversity in patients with intracranial aneurysms.	Pyysalo MJ, Mishra PP, Sundstrom K, Lehtimaki T, Karhunen PJ, Pessi T.	PeerJ	10.7717/peerj.6316	2019
Enzymology	The apical root canal system microbial communities determined by next-generation sequencing.	de Brito LCN, Doolittle-Hall J, Lee CT, Moss K, Bambirra Junior W, Tavares WLF, Ribeiro Sobrinho AP, Teles FRF.	Sci Rep	10.1038/s41598-020-67828-3	2020
Genetics	The Novel ASIC2 Locus is Associated with Severe Gingival Inflammation.	Zhang S, Divaris K, Moss K, Yu N, Barros S, Marchesan J, Morelli T, Agler C, Kim SJ, Wu D, North KE, Beck J, Offenbacher S.	JDR Clin Trans Res	10.1177/2380084416645290	2016
Enzymology	Salivary Periodontopathic Bacteria in Children and Adolescents with Down Syndrome.	Faria Carrada C, Almeida Ribeiro Scalioni F, Evangelista Cesar D, Lopes Devito K, Ribeiro LC, Almeida Ribeiro R.	PLoS One	10.1371/journal.pone.0162988	2016
Genetics	Subgingival microbiome in periodontitis and type 2 diabetes mellitus: an exploratory study using metagenomic sequencing.	Lu X, Liu T, Zhou J, Liu J, Yuan Z, Guo L.	J Periodontal Implant Sci	10.5051/jpis.2103460173	2022
	The increasing importance of the oral microbiome in periodontal health and disease.	Siddiqui R, Badran Z, Boghossian A, Alharbi AM, Alfahemi H, Khan NA.	Future Sci OA	10.2144/fsoa-2023-0062	2023
	Periodontopathic bacteria in rheumatoid arthritis pathogenesis: bridging clinical associations to molecular mechanisms.	Guo X, Wang S, Ding J, Liu W, Xu J, Wang M, Sun H, Ma Y, Liu W, Zhang L, Liu M.	Front Immunol	10.3389/fimmu.2025.1681037	2025
Enzymology	Prevalence of four putative periodontopathic bacteria in saliva of a group of Brazilian children with mixed dentition: 1-year longitudinal study.	Sakai VT, Campos MR, Machado MA, Lauris JR, Greene AS, Santos CF.	Int J Paediatr Dent	10.1111/j.1365-263x.2006.00813.x	2007
	Identification of Microbial Pathogens in Periodontal disease and Diabetic patients of South Indian Population.	Chiranjeevi T, Prasad OH, Prasad UV, Kumar AK, Chakravarthi VP, Rao PB, Sarma PV, Reddy NR, Bhaskar M.	Bioinformation	10.6026/97320630010241	2014
	Tolerability of a green tea-based mouth rinse: A pilot study.	Abdulkarim R, Al-Subhi A, Bukhari R, Alkhattabi N, Mira R, Felemban O, Elbadawi L, Almazrooa S, Mawardi H.	Saudi Dent J	10.1016/j.sdentj.2019.04.004	2019
Enzymology	Presence of non-oral bacteria in the oral cavity.	Zaatout N.	Arch Microbiol	10.1007/s00203-021-02300-y	2021
Phylogeny	Subgingival microbiota of periodontally untreated Mexican subjects with generalized aggressive periodontitis.	Ximenez-Fyvie LA, Almaguer-Flores A, Jacobo-Soto V, Lara-Cordoba M, Moreno-Borjas JY, Alcantara-Maruri E.	J Clin Periodontol	10.1111/j.1600-051x.2006.01006.x	2006
	Periodontitis associated with plasminogen deficiency: a case report.	Neering SH, Adyani-Fard S, Klocke A, Ruttermann S, Flemmig TF, Beikler T.	BMC Oral Health	10.1186/s12903-015-0045-3	2015
Phylogeny	Effect of cigarette smoking on subgingival bacteria in healthy subjects and patients with chronic periodontitis.	Karasneh JA, Al Habashneh RA, Marzouka NA, Thornhill MH.	BMC Oral Health	10.1186/s12903-017-0359-4	2017
Phylogeny	Oral ecological environment modifications by hard-cheese: from pH to microbiome: a prospective cohort study based on 16S rRNA metabarcoding approach.	Lorenzini EC, Lazzari B, Tartaglia GM, Farronato G, Lanteri V, Botti S, Biscarini F, Cozzi P, Stella A.	J Transl Med	10.1186/s12967-022-03506-4	2022
	Faecal Bacteriome and Metabolome Profiles Associated with Decreased Mucosal Inflammatory Activity Upon Anti-TNF Therapy in Paediatric Crohn's Disease.	Hurych J, Mascellani Bergo A, Lerchova T, Hlinakova L, Kubat M, Malcova H, Cebecauerova D, Schwarz J, Karaskova E, Hecht T, Vyhnanek R, Toukalkova L, Dotlacil V, Greinerova K, Cizkova A, Horvath R, Horvath R, Bronsky J, Havlik J, Hradsky O, Cinek O.	J Crohns Colitis	10.1093/ecco-jcc/jjad126	2024
	Interleukin-1alpha stimulation in monocytes by periodontal bacteria: antagonistic effects of Porphyromonas gingivalis.	Bostanci N, Allaker R, Johansson U, Rangarajan M, Curtis MA, Hughes FJ, McKay IJ.	Oral Microbiol Immunol	10.1111/j.1399-302x.2007.00322.x	2007
	Antibacterial Electrodeposited Copper-Doped Calcium Phosphate Coatings for Dental Implants.	Pierre C, Bertrand G, Pavy I, Benhamou O, Rey C, Roques C, Combes C.	J Funct Biomater	10.3390/jfb14010020	2022
Phylogeny	Salivary detection of periodontopathic bacteria and periodontal health status in dental students.	Leblebicioglu B, Kulekci G, Ciftci S, Keskin F, Badur S.	Anaerobe	10.1016/j.anaerobe.2008.12.005	2009
	[Inhibition of extracts from 17 Chinese herbs on periodontal pathogenic microbes].	Zhu CL, Li MY.	Shanghai Kou Qiang Yi Xue		2006
Phylogeny	Oral Microbiota Identifies Patients in Early Onset Rheumatoid Arthritis.	Esberg A, Johansson L, Johansson I, Dahlqvist SR.	Microorganisms	10.3390/microorganisms9081657	2021
	The oral microbiome and breast cancer and nonmalignant breast disease, and its relationship with the fecal microbiome in the Ghana Breast Health Study.	Wu Z, Byrd DA, Wan Y, Ansong D, Clegg-Lamptey JN, Wiafe-Addai B, Edusei L, Adjei E, Titiloye N, Dedey F, Aitpillah F, Oppong J, Vanderpuye V, Osei-Bonsu E, Dagnall CL, Jones K, Hutchinson A, Hicks BD, Ahearn TU, Shi J, Knight R, Biritwum R, Yarney J, Wiafe S, Awuah B, Nyarko K, Figueroa JD, Sinha R, Garcia-Closas M, Brinton LA, Vogtmann E.	Int J Cancer	10.1002/ijc.34145	2022
	Microbial characteristics across different tongue coating types in a healthy population.	Chen H, Li Q, Li M, Liu S, Yao C, Wang Z, Zhao Z, Liu P, Yang F, Li X, Wang J, Zeng Y, Tong X.	J Oral Microbiol	10.1080/20002297.2021.1946316	2021
Pathogenicity	Antimicrobial susceptibility of periodontopathogenic bacteria.	Kulik EM, Lenkeit K, Chenaux S, Meyer J.	J Antimicrob Chemother	10.1093/jac/dkn079	2008
Enzymology	Porphyromonas gingivalis, Porphyromonas endodontalis, Prevotella intermedia and Prevotella nigrescens in endodontic lesions detected by culture and by PCR.	Gomes BP, Jacinto RC, Pinheiro ET, Sousa EL, Zaia AA, Ferraz CC, Souza-Filho FJ.	Oral Microbiol Immunol	10.1111/j.1399-302x.2005.00214.x	2005
Metabolism	Nitric oxide production and inducible nitric oxide synthase expression induced by Prevotella nigrescens lipopolysaccharide.	Kim SJ, Ha MS, Choi EY, Choi JI, Choi IS.	FEMS Immunol Med Microbiol	10.1016/j.femsim.2004.07.001	2005
Metabolism	Bacterial and Candida albicans adhesion on rapid prototyping-produced 3D-scaffolds manufactured as bone replacement materials.	Al-Ahmad A, Wiedmann-Al-Ahmad M, Carvalho C, Lang M, Follo M, Braun G, Wittmer A, Mulhaupt R, Hellwig E.	J Biomed Mater Res A	10.1002/jbm.a.31832	2008
	Interrelation of Cardiovascular Diseases with Anaerobic Bacteria of Subgingival Biofilm.	Nikolaeva EN, Tsarev VN, Tsareva TV, Ippolitov EV, Arutyunov SD.	Contemp Clin Dent	10.4103/ccd.ccd_84_19	2019
	Altered gut metabolites and microbiota interactions are implicated in colorectal carcinogenesis and can be non-invasive diagnostic biomarkers.	Coker OO, Liu C, Wu WKK, Wong SH, Jia W, Sung JJY, Yu J.	Microbiome	10.1186/s40168-021-01208-5	2022
	Colonization pattern of periodontal bacteria in Japanese children and their mothers.	Kobayashi N, Ishihara K, Sugihara N, Kusumoto M, Yakushiji M, Okuda K.	J Periodontal Res	10.1111/j.1600-0765.2007.01005.x	2008
	The Impact of Smoking on Microbiota: A Narrative Review.	Cicchinelli S, Rosa F, Manca F, Zanza C, Ojetti V, Covino M, Candelli M, Gasbarrini A, Franceschi F, Piccioni A.	Biomedicines	10.3390/biomedicines11041144	2023
	In vitro evaluation of the sealing ability of newly developed calcium phosphate-based root canal sealer.	Yang SE, Baek SH, Lee W, Kum KY, Bae KS.	J Endod	10.1016/j.joen.2006.07.023	2007
	Supportive periodontal therapy using mechanical instrumentation or 2% minocycline gel: a 12 month randomized, controlled, single masked pilot study.	McColl E, Patel K, Dahlen G, Tonetti M, Graziani F, Suvan J, Laurell L.	J Clin Periodontol	10.1111/j.1600-051x.2005.00879.x	2006
	Influence of combinations of bacteria on the levels of prostaglandin E2, interleukin-1beta, and granulocyte elastase in gingival crevicular fluid and on the severity of periodontal disease.	Airila-Mansson S, Soder B, Kari K, Meurman JH.	J Periodontol	10.1902/jop.2006.050208	2006
	Herpesviral-bacterial synergy in the pathogenesis of human periodontitis.	Slots J.	Curr Opin Infect Dis	10.1097/qco.0b013e3280964da0	2007
	Effectiveness of photodynamic therapy on the treatment of chronic periodontitis: a systematic review during 2008-2023.	Mahdizade Ari M, Amirmozafari N, Atieh Darbandi, Afifirad R, Asadollahi P, Irajian G.	Front Chem	10.3389/fchem.2024.1384344	2024
	The Impact of Smoking on Subgingival Microflora: From Periodontal Health to Disease.	Jiang Y, Zhou X, Cheng L, Li M.	Front Microbiol	10.3389/fmicb.2020.00066	2020
Enzymology	Salivary detection of periodontopathic bacteria in periodontally healthy children.	Kulekci G, Leblebicioglu B, Keskin F, Ciftci S, Badur S.	Anaerobe	10.1016/j.anaerobe.2007.08.001	2008
	Association between periodontal disease and chronic obstructive pulmonary disease.	Lin P, Liu A, Tsuchiya Y, Noritake K, Ohsugi Y, Toyoshima K, Tsukahara Y, Shiba T, Nitta H, Aoki A, Iwata T, Katagiri S.	Jpn Dent Sci Rev	10.1016/j.jdsr.2023.10.004	2023
Metabolism	A novel exopolysaccharide from a clinical isolate of Prevotella nigrescens: purification, chemical characterization and possible role in modifying human leukocyte phagocytosis.	Yamane K, Yamanaka T, Yamamoto N, Furukawa T, Fukushima H, Walker CB, Leung KP.	Oral Microbiol Immunol	10.1111/j.1399-302x.2004.00178.x	2005
	Comparative In Vitro Resistance of Human Periodontal Bacterial Pathogens to Tinidazole and Four Other Antibiotics.	Rams TE, Sautter JD, van Winkelhoff AJ.	Antibiotics (Basel)	10.3390/antibiotics9020068	2020
	The Current Antimicrobial and Antibiofilm Activities of Synthetic/Herbal/Biomaterials in Dental Application.	Moghaddam A, Ranjbar R, Yazdanian M, Tahmasebi E, Alam M, Abbasi K, Hosseini ZS, Tebyaniyan H.	Biomed Res Int	10.1155/2022/8856025	2022
	A New Comorbidity in Periodontitis: Fusobacterium nucleatum and Colorectal Cancer.	Mesa F, Mesa-Lopez MJ, Egea-Valenzuela J, Benavides-Reyes C, Nibali L, Ide M, Mainas G, Rizzo M, Magan-Fernandez A.	Medicina (Kaunas)	10.3390/medicina58040546	2022
Enzymology	[Relationship between herpesviruses and periodontal pathogenic bacteria in subgingival plaque].	Ding F, Feng XH, Meng HX, Zhao YB, Zhang L, Lu RF, Chen ZB.	Beijing Da Xue Xue Bao Yi Xue Ban		2008
Pathogenicity	Postoperative effects on lower third molars of using mouthwashes with super-oxidized solution versus 0.2% chlorhexidine gel: A randomized double-blind trial.	Coello-Gomez A, Navarro-Suarez S, Diosdado-Cano JM, Azcarate-Velazquez F, Bargiela-Perez P, Serrera-Figallo MA, Torres-Lagares D, Gutierrez-Perez JL.	Med Oral Patol Oral Cir Bucal	10.4317/medoral.22622	2018
Pathogenicity	Minocycline-loaded PLGA electrospun membrane prevents alveolar bone loss in experimental peridontitis.	Ma Y, Song J, Almassri HNS, Zhang D, Zhang T, Cheng Y, Wu X.	Drug Deliv	10.1080/10717544.2019.1709921	2020
	Periodontitis in rheumatoid arthritis patients, abundance and association with disease activity.	Mobini M, Maboudi A, Ali Mohammadpour R.	Med J Islam Repub Iran	10.14196/mjiri.31.44	2017
Phylogeny	Oral microbiota in youth with perinatally acquired HIV infection.	Starr JR, Huang Y, Lee KH, Murphy CM, Moscicki AB, Shiboski CH, Ryder MI, Yao TJ, Faller LL, Van Dyke RB, Paster BJ, Pediatric HIV/AIDS Cohort Study.	Microbiome	10.1186/s40168-018-0484-6	2018
	Tetracycline and multidrug resistance in the oral microbiota: differences between healthy subjects and patients with periodontitis in Spain.	Arredondo A, Blanc V, Mor C, Nart J, Leon R.	J Oral Microbiol	10.1080/20002297.2020.1847431	2020
	Microbial analysis of canals of root-filled teeth with periapical lesions using polymerase chain reaction.	Gomes BP, Pinheiro ET, Jacinto RC, Zaia AA, Ferraz CC, Souza-Filho FJ.	J Endod	10.1016/j.joen.2008.01.016	2008
Enzymology	The prevalence of periodontopathogenic bacteria in saliva is linked to periodontal health status and oral malodour.	Kurata H, Awano S, Yoshida A, Ansai T, Takehara T.	J Med Microbiol	10.1099/jmm.0.47706-0	2008
	Subgingival microbiota dysbiosis in systemic lupus erythematosus: association with periodontal status.	Correa JD, Calderaro DC, Ferreira GA, Mendonca SM, Fernandes GR, Xiao E, Teixeira AL, Leys EJ, Graves DT, Silva TA.	Microbiome	10.1186/s40168-017-0252-z	2017
Pathogenicity	Adjunctive Antiseptic Irrigation of Periodontal Pockets: Effects on Microbial and Cytokine Profiles.	Vitt A, Babenka A, Bostrom EA, Gustafsson A, Lira Junior R, Slizen V, Sorsa T, Tervahartiala T, Buhlin K.	Dent J (Basel)	10.3390/dj8040124	2020
Metabolism	Antigenic activity of bacterial endodontic contents from primary root canal infection with periapical lesions against macrophage in the release of interleukin-1beta and tumor necrosis factor alpha.	Martinho FC, Chiesa WM, Leite FR, Cirelli JA, Gomes BP.	J Endod	10.1016/j.joen.2010.06.012	2010
Metabolism	Root canal contamination or exposure to lipopolysaccharide differentially modulate prostaglandin E 2 and leukotriene B 4 signaling in apical periodontitis.	Paula-Silva FWG, Ribeiro-Santos FR, Petean IBF, Manfrin Arnez MF, Almeida-Junior LA, Carvalho FK, Silva LABD, Faccioli LH.	J Appl Oral Sci	10.1590/1678-7757-2019-0699	2020
	Hemoglobin binding activity and hemoglobin-binding protein of Prevotella nigrescens.	Miyashita M, Oishi S, Kiso A, Kikuchi Y, Ueda O, Hirai K, Shibata Y, Fujimura S.	Eur J Med Res	10.1186/2047-783x-15-7-314	2010
	Accuracy of commercial kits and published primer pairs for the detection of periodontopathogens.	Santigli E, Leitner E, Wimmer G, Kessler HH, Feierl G, Grube M, Eberhard K, Klug B.	Clin Oral Investig	10.1007/s00784-016-1748-9	2016
	Alterations in Gastric Microbial Communities Are Associated with Risk of Gastric Cancer in a Korean Population: A Case-Control Study.	Gunathilake M, Lee J, Choi IJ, Kim YI, Yoon J, Sul WJ, Kim JF, Kim J.	Cancers (Basel)	10.3390/cancers12092619	2020
	Diversity of site-specific microbes of occlusal and proximal lesions in severe- early childhood caries (S-ECC).	Fakhruddin KS, Samaranayake LP, Hamoudi RA, Ngo HC, Egusa H.	J Oral Microbiol	10.1080/20002297.2022.2037832	2022
	16S rRNA Long-Read Sequencing of the Granulation Tissue from Nonsmokers and Smokers-Severe Chronic Periodontitis Patients.	Chowdhry R, Singh N, Sahu DK, Tripathi RK, Mishra A, Singh A, Shyam H, Shankar P, Lal N, Bhatt MLB, Kant R.	Biomed Res Int	10.1155/2018/4832912	2018
	Oral microbial profile variation during canine ligature-induced peri-implantitis development.	Qiao S, Wu D, Wang M, Qian S, Zhu Y, Shi J, Wei Y, Lai H.	BMC Microbiol	10.1186/s12866-020-01982-6	2020
	Oral Microbiota Features in Subjects with Down Syndrome and Periodontal Diseases: A Systematic Review.	Contaldo M, Lucchese A, Romano A, Della Vella F, Di Stasio D, Serpico R, Serpico R, Petruzzi M.	Int J Mol Sci	10.3390/ijms22179251	2021
	Activation of toll-like receptors 2 and 4 by gram-negative periodontal bacteria.	Kikkert R, Laine ML, Aarden LA, van Winkelhoff AJ.	Oral Microbiol Immunol	10.1111/j.1399-302x.2007.00335.x	2007
	Comparative Metatranscriptomics of Periodontitis Supports a Common Polymicrobial Shift in Metabolic Function and Identifies Novel Putative Disease-Associated ncRNAs.	Ram-Mohan N, Meyer MM.	Front Microbiol	10.3389/fmicb.2020.00482	2020
	Systematic Review: Contribution of the Gut Microbiome to the Volatile Metabolic Fingerprint of Colorectal Neoplasia.	van Vorstenbosch R, Cheng HR, Jonkers D, Penders J, Schoon E, Masclee A, van Schooten FJ, Smolinska A, Mujagic Z.	Metabolites	10.3390/metabo13010055	2022
	The microbiological profiles of saliva, supragingival and subgingival plaque and dental caries in adults with and without type 2 diabetes mellitus.	Hintao J, Teanpaisan R, Chongsuvivatwong V, Ratarasan C, Dahlen G.	Oral Microbiol Immunol	10.1111/j.1399-302x.2007.00341.x	2007
	Microbial Adhesion and Biofilm Formation on Bioactive Surfaces of Ti-35Nb-7Zr-5Ta Alloy Created by Anodization.	Fais LMG, de Sales Leite L, Reis BAD, Ribeiro ALR, Vaz LG, Klein MI.	Microorganisms	10.3390/microorganisms9102154	2021
Phylogeny	Dysbiosis and Variation in Predicted Functions of the Granulation Tissue Microbiome in HPV Positive and Negative Severe Chronic Periodontitis.	Chowdhry R, Singh N, Sahu DK, Tripathi RK, Mishra A, Singh A, Mukerjee I, Lal N, Bhatt MLB, Kant R.	Biomed Res Int	10.1155/2019/8163591	2019
	Patterns of Oral Microbiota in Patients with Apical Periodontitis.	Korona-Glowniak I, Piatek D, Fornal E, Lukowiak A, Gerasymchuk Y, Kedziora A, Bugla-Ploskonska G, Grywalska E, Bachanek T, Malm A.	J Clin Med	10.3390/jcm10122707	2021
Enzymology	Isolation and properties of a tripeptidyl peptidase from a periodontal pathogen Prevotella nigrescens.	Fujimura S, Ueda O, Shibata Y, Hirai K.	FEMS Microbiol Lett	10.1016/s0378-1097(03)00048-x	2003
	A 12-month randomized controlled trial evaluating erythritol air-polishing versus curette/ultrasonic debridement of mandibular furcations in supportive periodontal therapy.	Ulvik IM, Saethre T, Bunaes DF, Lie SA, Enersen M, Leknes KN.	BMC Oral Health	10.1186/s12903-021-01397-3	2021
	Oral bacteria in the occluded arteries of patients with Buerger disease.	Iwai T, Inoue Y, Umeda M, Huang Y, Kurihara N, Koike M, Ishikawa I.	J Vasc Surg	10.1016/j.jvs.2005.03.016	2005
	Agreement, correlation, and kinetics of the alveolar bone-loss measurement methodologies in a ligature-induced periodontitis animal model.	Vargas-Sanchez PK, Moro MG, Santos FAD, Anbinder AL, Kreich E, Moraes RM, Padilha L, Kusiak C, Scomparin DX, Franco GCN.	J Appl Oral Sci	10.1590/1678-7757-2016-0517	2017
Phylogeny	Quantitative detection of periodontal pathogens using real-time polymerase chain reaction with TaqMan probes.	Kuboniwa M, Amano A, Kimura KR, Sekine S, Kato S, Yamamoto Y, Okahashi N, Iida T, Shizukuishi S.	Oral Microbiol Immunol	10.1111/j.0902-0055.2004.00135.x	2004
	Impacts of sleep on the characteristics of dental biofilm.	Sotozono M, Kuriki N, Asahi Y, Noiri Y, Hayashi M, Motooka D, Nakamura S, Machi H, Iida T, Ebisu S.	Sci Rep	10.1038/s41598-020-80541-5	2021
Pathogenicity	Inhibitory effect of serum globulins on the adhesion of Prevotella nigrescens to hydroxyapatite.	Kuroda K, Hirano Y, Tamura M, Hayashi K.	J Oral Sci	10.2334/josnusd.45.11	2003
	Persistently high levels of periodontal pathogens associated with preterm pregnancy outcome.	Lin D, Moss K, Beck JD, Hefti A, Offenbacher S.	J Periodontol	10.1902/jop.2007.060201	2007
	The Microbiome in Connective Tissue Diseases and Vasculitides: An Updated Narrative Review.	Talotta R, Atzeni F, Ditto MC, Gerardi MC, Sarzi-Puttini P.	J Immunol Res	10.1155/2017/6836498	2017
	The multispecies microbial cluster of Fusobacterium, Parvimonas, Bacteroides and Faecalibacterium as a precision biomarker for colorectal cancer diagnosis.	Conde-Perez K, Aja-Macaya P, Buetas E, Trigo-Tasende N, Nasser-Ali M, Rumbo-Feal S, Nion P, Arribas EM, Estevez LS, Otero-Alen B, Noguera JF, Concha A, Pardinas-Lopez S, Carda-Dieguez M, Gomez-Randulfe I, Martinez-Lago N, Ladra S, Aparicio LMA, Bou G, Mira A, Vallejo JA, Poza M.	Mol Oncol	10.1002/1878-0261.13604	2024
	Functional biomarkers for chronic periodontitis and insights into the roles of Prevotella nigrescens and Fusobacterium nucleatum; a metatranscriptome analysis.	Szafranski SP, Deng ZL, Tomasch J, Jarek M, Bhuju S, Meisinger C, Kuhnisch J, Sztajer H, Wagner-Dobler I.	NPJ Biofilms Microbiomes	10.1038/npjbiofilms.2015.17	2015
	Intraindividual variation in core microbiota in peri-implantitis and periodontitis.	Maruyama N, Maruyama F, Takeuchi Y, Aikawa C, Izumi Y, Nakagawa I.	Sci Rep	10.1038/srep06602	2014
Metabolism	Metabolites with SARS-CoV-2 Inhibitory Activity Identified from Human Microbiome Commensals.	Piscotta FJ, Hoffmann HH, Choi YJ, Small GI, Ashbrook AW, Koirala B, Campbell EA, Darst SA, Rice CM, Brady SF.	mSphere	10.1128/msphere.00711-21	2021
	Distinct Microbial Signatures between Periodontal Profile Classes.	Marchesan JT, Moss K, Morelli T, Teles FR, Divaris K, Styner M, Ribeiro AA, Webster-Cyriaque J, Beck J.	J Dent Res	10.1177/00220345211009767	2021
Metabolism	Proteinase activity of prevotella species associated with oral purulent infection.	Yanagisawa M, Kuriyama T, Williams DW, Nakagawa K, Karasawa T.	Curr Microbiol	10.1007/s00284-005-0261-1	2006
Phylogeny	Microbiologic changes in subgingival plaque before and during the early period of orthodontic treatment.	Kim SH, Choi DS, Jang I, Cha BK, Jost-Brinkmann PG, Song JS.	Angle Orthod	10.2319/030311-156.1	2012
	Microbiota of the dorsum of the tongue after plaque accumulation: an experimental study in humans.	Faveri M, Feres M, Shibli JA, Hayacibara RF, Hayacibara MM, de Figueiredo LC.	J Periodontol	10.1902/jop.2006.050366	2006
	The haem pigment of the oral anaerobes Prevotella nigrescens and Prevotella intermedia is composed of iron(III) protoporphyrin IX in the monomeric form.	Smalley JW, Silver J, Birss AJ, Withnall R, Titler PJ.	Microbiology (Reading)	10.1099/mic.0.26258-0	2003
Enzymology	[Prevalence of putative periodontal microorganisms in Chinese patients with aggressive periodontitis].	Feng XH, Zhang L, Meng HX, Xu L, Chen ZB, Shi D.	Zhonghua Kou Qiang Yi Xue Za Zhi		2006
Phylogeny	Phylogenetic analysis of Prevotella nigrescens, Prevotella intermedia and Porphyromonas gingivalis clinical strains reveals a clear species clustering.	Kuhnert P, Frey J, Lang NP, Mayfield L.	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1391	2002
	Synovial inflammation in active rheumatoid arthritis and psoriatic arthritis facilitates trapping of a variety of oral bacterial DNAs.	Moen K, Brun JG, Valen M, Skartveit L, Eribe EK, Olsen I, Jonsson R.	Clin Exp Rheumatol		2006
Pathogenicity	The bidirectional relationship between periodontal disease and pregnancy via the interaction of oral microorganisms, hormone and immune response.	Wen X, Fu X, Zhao C, Yang L, Huang R.	Front Microbiol	10.3389/fmicb.2023.1070917	2023
	Clinical consequences of IL-1 genotype on early implant failures in patients under periodontal maintenance.	Jansson H, Hamberg K, De Bruyn H, Bratthall G.	Clin Implant Dent Relat Res	10.1111/j.1708-8208.2005.tb00047.x	2005
Enzymology	Sampling strategy for intraoral detection of periodontal pathogens before and following periodontal therapy.	Beikler T, Schnitzer S, Abdeen G, Ehmke B, Eisenacher M, Flemmig TF.	J Periodontol	10.1902/jop.2006.050204	2006
	Spatial mapping of mobile genetic elements and their bacterial hosts in complex microbiomes.	Grodner B, Shi H, Farchione O, Vill AC, Ntekas I, Diebold PJ, Wu DT, Chen CY, Kim DM, Zipfel WR, Brito IL, De Vlaminck I.	Nat Microbiol	10.1038/s41564-024-01735-5	2024
	The cell extract of Porphyromonas gingivalis promotes attachment of Prevotella nigrescens cells to hydroxyapatite.	Hirano Y, Kuroda K, Tamura M, Hayashi K.	J Oral Sci	10.2334/josnusd.45.99	2003
	Phenotypic Adaptation to Antiseptics and Effects on Biofilm Formation Capacity and Antibiotic Resistance in Clinical Isolates of Early Colonizers in Dental Plaque.	Auer DL, Mao X, Anderson AC, Muehler D, Wittmer A, von Ohle C, Wolff D, Frese C, Hiller KA, Maisch T, Buchalla W, Hellwig E, Al-Ahmad A, Cieplik F.	Antibiotics (Basel)	10.3390/antibiotics11050688	2022
	Periodontitis and Buerger's Disease: Recent Advances.	Pavlic V, Vujic-Aleksic V, Zubovic N, Gojkov-Vukelic M.	Acta Inform Med	10.5455/aim.2013.21.250-252	2013
	Changes in the subgingival microbiota and periodontal parameters before and 3 months after bracket placement.	Naranjo AA, Trivino ML, Jaramillo A, Betancourth M, Botero JE.	Am J Orthod Dentofacial Orthop	10.1016/j.ajodo.2005.10.022	2006
Metabolism	Characterization of binding and utilization of hemoglobin by Prevotella nigrescens.	Guan S, Nagata H, Kuboniwa M, Ikawa Y, Maeda K, Shizukuishi S.	Oral Microbiol Immunol	10.1034/j.1399-302x.2002.170304.x	2002
	Clinical and microbiological profiles of human immunodeficiency virus (HIV)-seropositive Brazilians undergoing highly active antiretroviral therapy and HIV-seronegative Brazilians with chronic periodontitis.	Goncalves LS, Soares Ferreira SM, Souza CO, Souto R, Colombo AP.	J Periodontol	10.1902/jop.2007.060040	2007
Enzymology	Diversity analysis of subgingival microbial bacteria in peri-implantitis in Uygur population.	Gao X, Zhou J, Sun X, Li X, Zhou Y.	Medicine (Baltimore)	10.1097/md.0000000000009774	2018
	Effect of oral bacteria on growth and survival of Candida albicans biofilms.	Thein ZM, Samaranayake YH, Samaranayake LP.	Arch Oral Biol	10.1016/j.archoralbio.2006.02.005	2006
	Relationship of periodontal bacteria and Porphyromonas gingivalis fimA variations with phenytoin-induced gingival overgrowth.	Akiyama S, Amano A, Kato T, Takada Y, Kimura KR, Morisaki I.	Oral Dis	10.1111/j.1601-0825.2005.01157.x	2006
	Sustained Drug Treatment Alters the Gut Microbiota in Rheumatoid Arthritis.	Mei L, Yang Z, Zhang X, Liu Z, Wang M, Wu X, Chen X, Huang Q, Huang R.	Front Immunol	10.3389/fimmu.2021.704089	2021
	Severe periodontitis in a 5-year-old girl with hyperimmunoglobulin E syndrome.	Tsang P, Derkson G, Priddy R, Junker AK, Slots J, Larjava H.	Pediatr Dent		2005
	Salivary microbiome in patients undergoing hemodialysis and its associations with the duration of the dialysis.	Duan X, Chen X, Gupta M, Seriwatanachai D, Xue H, Xiong Q, Xu T, Li D, Mo A, Tang X, Zhou X, Li Y, Yuan Q.	BMC Nephrol	10.1186/s12882-020-02009-y	2020
Enzymology	Microbiology of parapharyngeal abscesses in adults: in search of the significant pathogens.	Klug TE, Greve T, Andersen C, Hahn P, Danstrup C, Petersen NK, Ninn-Pedersen M, Mikkelsen S, Pauli S, Fuglsang S, Dossing H, Christensen AL, Rusan M, Kjeldsen A.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-021-04180-y	2021
	Hemolytic activity of Prevotella intermedia and Prevotella nigrescens strains: influence of abiotic factors in solid and liquid assays.	Silva TA, Rodrigues PH, Ribeiro RN, Noronha FS, Farias Lde M, Carvalho MA.	Res Microbiol	10.1016/s0923-2508(02)00003-7	2003
	[Subgingival microbiota in chronic and aggressive periodontitis in Bogotá, Colombia: an epidemiological approach].	Mayorga-Fayad I, Lafaurie GI, Contreras A, Castillo DM, Baron A, Aya Mdel R.	Biomedica	/s0120-41572007000100003	2007
Phylogeny	Microbiota of deciduous endodontic infections analysed by MDA and Checkerboard DNA-DNA hybridization.	Tavares WL, Neves de Brito LC, Teles RP, Massara ML, Ribeiro Sobrinho AP, Haffajee AD, Socransky SS, Teles FR.	Int Endod J	10.1111/j.1365-2591.2010.01805.x	2011
	Potential Pathogenic Bacteria in Seminal Microbiota of Patients with Different Types of Dysspermatism.	Yang H, Zhang J, Xue Z, Zhao C, Lei L, Wen Y, Dong Y, Yang J, Zhang L.	Sci Rep	10.1038/s41598-020-63787-x	2020
Phylogeny	Pi30 DNA probe may be useful for the identification of Prevotella intermedia at the species or strain level.	Shin YK, Jeong SU, Yoo SY, Kim MK, Kim HS, Kim BO, Kim DK, Hwang HK, Kook JK.	Microbiol Immunol	10.1111/j.1348-0421.2004.tb03622.x	2004
	Prevalence of Anaerobic Bacteria (P.gingivalis) as Major Microbial Agent in the Incidence Periodontal Diseases by Meta-analysis.	Rafiei M, Kiani F, Sayehmiri K, Sayehmiri F, Tavirani M, Dousti M, Sheikhi A.	J Dent (Shiraz)		2018
Pathogenicity	Inhibitory effects of macrocarpals on the biological activity of Porphyromonas gingivalis and other periodontopathic bacteria.	Nagata H, Inagaki Y, Yamamoto Y, Maeda K, Kataoka K, Osawa K, Shizukuishi S.	Oral Microbiol Immunol	10.1111/j.1399-302x.2006.00269.x	2006
	Safe-by-Design Antibacterial Peroxide-Substituted Biomimetic Apatites: Proof of Concept in Tropical Dentistry.	Ana ID, Lestari A, Lagarrigue P, Soulie J, Anggraeni R, Maube-Bosc F, Thouron C, Duployer B, Tenailleau C, Drouet C.	J Funct Biomater	10.3390/jfb13030144	2022
Metabolism	Dipeptide utilization by the periodontal pathogens Porphyromonas gingivalis, Prevotella intermedia, Prevotella nigrescens and Fusobacterium nucleatum.	Takahashi N, Sato T.	Oral Microbiol Immunol	10.1046/j.0902-0055.2001.00089.x	2002
	Evaluation of different culture media to support in vitro growth and biofilm formation of bacterial vaginosis-associated anaerobes.	Rosca AS, Castro J, Cerca N.	PeerJ	10.7717/peerj.9917	2020
Enzymology	Direct quantitative differentiation between Prevotella intermedia and Prevotella nigrescens in clinical specimens.	Gmur R, Thurnheer T.	Microbiology (Reading)	10.1099/00221287-148-5-1379	2002
	Gut bacterial species in late trimester of pregnant sows influence the occurrence of stillborn piglet through pro-inflammation response.	Chen Z, Yang H, Fu H, Wu L, Liu M, Jiang H, Liu Q, Wang Y, Xiong S, Zhou M, Sun X, Chen C, Huang L.	Front Immunol	10.3389/fimmu.2022.1101130	2022
	Clinical and microbiological evaluation of the periodontal status of children with unilateral complete cleft lip and palate.	Costa B, Lima JE, Gomide MR, Rosa OP.	Cleft Palate Craniofac J	10.1597/01-083	2003
	Effects of Cinnamon (Cinnamomum spp.) in Dentistry: A Review.	Yanakiev S.	Molecules	10.3390/molecules25184184	2020
	Evaluation of antibacterial efficacy of biosynthesized silver nanoparticles derived from fungi against endo-perio pathogens Porphyromonas gingivalis, Bacillus pumilus, and Enterococcus faecalis.	Halkai KR, Mudda JA, Shivanna V, Rathod V, Halkai RS.	J Conserv Dent	10.4103/jcd.jcd_173_17	2017
Phylogeny	The influence of orthodontic fixed appliances on the oral microbiota: a systematic review.	Freitas AO, Marquezan M, Nojima Mda C, Alviano DS, Maia LC.	Dental Press J Orthod	10.1590/2176-9451.19.2.046-055.oar	2014
	Linkages between oral commensal bacteria and atherosclerotic plaques in coronary artery disease patients.	Chhibber-Goel J, Singhal V, Bhowmik D, Vivek R, Parakh N, Bhargava B, Sharma A.	NPJ Biofilms Microbiomes	10.1038/s41522-016-0009-7	2016
Genetics	Drift of the Subgingival Periodontal Microbiome during Chronic Periodontitis in Type 2 Diabetes Mellitus Patients.	Balmasova IP, Olekhnovich EI, Klimina KM, Korenkova AA, Vakhitova MT, Babaev EA, Ovchinnikova LA, Lomakin YA, Smirnov IV, Tsarev VN, Mkrtumyan AM, Belogurov AA, Gabibov AG, Ilina EN, Arutyunov SD.	Pathogens	10.3390/pathogens10050504	2021
	A comparative evaluation of three root-end filling materials: an in vitro leakage study using Prevotella nigrescens.	Scheerer SQ, Steiman HR, Cohen J.	J Endod	10.1097/00004770-200101000-00013	2001
Metabolism	Effects of glucose on formation of cytotoxic end-products and proteolytic activity of Prevotella intermedia, Prevotella nigrescens and Porphyromonas gingivalis.	Saito K, Takahashi N, Horiuchi H, Yamada T.	J Periodontal Res	10.1034/j.1600-0765.2001.360602.x	2001
Enzymology	Levels of matrix metalloproteinases-8 and -9 with simultaneous presence of periodontal pathogens in gingival crevicular fluid as well as matrix metalloproteinase-9 and cholesterol in blood.	Soder B, Airila Mansson S, Soder PO, Kari K, Meurman J.	J Periodontal Res	10.1111/j.1600-0765.2006.00888.x	2006
	Dental Plaque Microbial Resistomes of Periodontal Health and Disease and Their Changes after Scaling and Root Planing Therapy.	Kang Y, Sun B, Chen Y, Lou Y, Zheng M, Li Z.	mSphere	10.1128/msphere.00162-21	2021
	Significant Differences in Bacterial and Potentially Pathogenic Communities Between Sympatric Hooded Crane and Greater White-Fronted Goose.	Xiang X, Zhang F, Fu R, Yan S, Zhou L.	Front Microbiol	10.3389/fmicb.2019.00163	2019
	Herpesviruses, the missing link between gingivitis and periodontitis?	Slots J.	J Int Acad Periodontol		2004
	A randomized clinical trial of an adjunct diode laser application for the nonsurgical treatment of peri-implantitis.	Arisan V, Karabuda ZC, Arici SV, Topcuoglu N, Kulekci G.	Photomed Laser Surg	10.1089/pho.2015.3956	2015
	Removable denture is a risk indicator for peri-implantitis and facilitates expansion of specific periodontopathogens: a cross-sectional study.	Grischke J, Szafranski SP, Muthukumarasamy U, Haeussler S, Stiesch M.	BMC Oral Health	10.1186/s12903-021-01529-9	2021
Enzymology	Prevalence of Prevotella intermedia and Prevotella nigrescens in infected root canals from a Brazilian population.	Siqueira Junior J, Rocas IN, Oliveira JC.	Aust Endod J	10.1111/j.1747-4477.2000.tb00293.x	2000
Enzymology	Tobacco smoking and periodontal microflora in a Saudi Arabian population.	Natto S, Baljoon M, Dahlen G, Bergstrom J.	J Clin Periodontol	10.1111/j.1600-051x.2005.00710.x	2005
Enzymology	Prevalence of putative periodontopathogens in subgingival dental plaques from gingivitis lesions in Korean orthodontic patients.	Lee SM, Yoo SY, Kim HS, Kim KW, Yoon YJ, Lim SH, Shin HY, Kook JK.	J Microbiol		2005
	Effects of periodontal therapy during pregnancy on periodontal status, biologic parameters, and pregnancy outcomes: a pilot study.	Offenbacher S, Lin D, Strauss R, McKaig R, Irving J, Barros SP, Moss K, Barrow DA, Hefti A, Beck JD.	J Periodontol	10.1902/jop.2006.060047	2006
	Analysis of the Microbiota of Black Stain in the Primary Dentition.	Li Y, Zhang Q, Zhang F, Liu R, Liu H, Chen F.	PLoS One	10.1371/journal.pone.0137030	2015
Pathogenicity	Clinically Healthy Human Gingival Tissues Show Significant Inter-individual Variability in GCF Chemokine Expression and Subgingival Plaque Microbial Composition.	Bamashmous S, Kotsakis GA, Jain S, Chang AM, McLean JS, Darveau RP.	Front Oral Health	10.3389/froh.2021.689475	2021
	Distribution of 10 periodontal bacteria in saliva samples from Japanese children and their mothers.	Tamura K, Nakano K, Hayashibara T, Nomura R, Fujita K, Shintani S, Ooshima T.	Arch Oral Biol	10.1016/j.archoralbio.2005.09.008	2006
	Comparison of Periodontopathic Bacterial Profiles of Different Periodontal Disease Severity Using Multiplex Real-Time Polymerase Chain Reaction.	Choi JU, Lee JB, Kim KH, Kim S, Seol YJ, Lee YM, Rhyu IC.	Diagnostics (Basel)	10.3390/diagnostics10110965	2020
	Clostridium perfringens enterotoxin induces claudin-4 to activate YAP in oral squamous cell carcinomas.	Nakashima C, Yamamoto K, Kishi S, Sasaki T, Ohmori H, Fujiwara-Tani R, Mori S, Kawahara I, Nishiguchi Y, Mori T, Kondoh M, Luo Y, Kirita T, Kuniyasu H.	Oncotarget	10.18632/oncotarget.27424	2020
	Submucosal microbiome of peri-implant sites: A cross-sectional study.	Polymeri A, van der Horst J, Buijs MJ, Zaura E, Wismeijer D, Crielaard W, Loos BG, Laine ML, Brandt BW.	J Clin Periodontol	10.1111/jcpe.13502	2021
Pathogenicity	Host defense peptides: An insight into the antimicrobial world.	Gupta S, Bhatia G, Sharma A, Saxena S.	J Oral Maxillofac Pathol	10.4103/jomfp.jomfp_113_16	2018
	Effect of coconut oil in plaque related gingivitis - A preliminary report.	Peedikayil FC, Sreenivasan P, Narayanan A.	Niger Med J	10.4103/0300-1652.153406	2015
	Periodontal Disease: A Possible Risk-Factor for Adverse Pregnancy Outcome.	Parihar AS, Katoch V, Rajguru SA, Rajpoot N, Singh P, Wakhle S.	J Int Oral Health		2015
	Susceptibility of Prevotella intermedia/Prevotella nigrescens (and Porphyromonas gingivalis) to propolis (bee glue) and other antimicrobial agents.	Santos FA, Bastos EM, Rodrigues PH, de Uzeda M, de Carvalho MA, Farias Lde M, Moreira ES.	Anaerobe	10.1006/anae.2002.0411	2002
	Genomic ancestry, diet and microbiomes of Upper Palaeolithic hunter-gatherers from San Teodoro cave.	Scorrano G, Nielsen SH, Vetro DL, Sawafuji R, Mackie M, Margaryan A, Fotakis AK, Martinez-Labarga C, Fabbri PF, Allentoft ME, Carra M, Martini F, Rickards O, Olsen JV, Pedersen MW, Cappellini E, Sikora M.	Commun Biol	10.1038/s42003-022-04190-2	2022
Pathogenicity	Participation of endotoxin in root canal infections: A systematic review and meta-analysis.	Martinho FC, de Rabello DGD, Ferreira LL, Nascimento GG.	Eur J Dent	10.4103/ejd.ejd_84_17	2017
	Keystone Species in Pregnancy Gingivitis: A Snapshot of Oral Microbiome During Pregnancy and Postpartum Period.	Balan P, Chong YS, Umashankar S, Swarup S, Loke WM, Lopez V, He HG, Seneviratne CJ.	Front Microbiol	10.3389/fmicb.2018.02360	2018
Enzymology	Selected endodontic pathogens in the apical third of infected root canals: a molecular investigation.	Siqueira JF, Rocas IN, Alves FR, Santos KR.	J Endod	10.1097/01.don.0000125875.88377.85	2004
	Geographical differences in bacteria detected in endodontic infections using polymerase chain reaction.	Baumgartner JC, Siqueira JF, Xia T, Rocas IN.	J Endod	10.1097/00004770-200403000-00004	2004
	Microbiological shifts in intra- and extraoral habitats following mechanical periodontal therapy.	Beikler T, Abdeen G, Schnitzer S, Salzer S, Ehmke B, Heinecke A, Flemmig TF.	J Clin Periodontol	10.1111/j.1600-051x.2004.00557.x	2004
Enzymology	Isolation of Propionibacterium acnes among the microbiota of primary endodontic infections with and without intraoral communication.	Niazi SA, Al Kharusi HS, Patel S, Bruce K, Beighton D, Foschi F, Mannocci F.	Clin Oral Investig	10.1007/s00784-016-1739-x	2016
Enzymology	Occurrence of Prevotella intermedia and Prevotella nigrescens in relation to gingivitis and gingival health.	Lie MA, van der Weijden GA, Timmerman MF, Loos BG, van Steenbergen TJ, van der Velden U.	J Clin Periodontol	10.1034/j.1600-051x.2001.028002189.x	2001
	Ribosomal DNA sequence analysis of mucosa-associated bacteria in Crohn's disease.	Prindiville T, Cantrell M, Wilson KH.	Inflamm Bowel Dis	10.1097/00054725-200411000-00017	2004
Pathogenicity	Effects of subgingival air-polishing with trehalose powder on oral biofilm during periodontal maintenance therapy: a randomized-controlled pilot study.	Kruse AB, Maamar R, Akakpo DL, Woelber JP, Wittmer A, Vach K, Ratka-Kruger P, Al-Ahmad A.	BMC Oral Health	10.1186/s12903-020-01111-9	2020
Enzymology	Presence of Streptococcus dentisani in the dental plaque of children from different Colombian cities.	Angarita-Diaz MP, Diaz JA, Tupaz HA, Lopez-Lopez A, Forero D, Mira A, Davila F, Ceron XA, Ochoa-Acosta EM, Gomez OL, Gonzalez G.	Clin Exp Dent Res	10.1002/cre2.158	2019
	Microflora in oral ecosystems in subjects with hyposalivation due to medicines or of unknown origin.	Almstahl A, Wikstrom M.	Oral Health Prev Dent		2005
Pathogenicity	Use of amnion-derived cellular cytokine solution for the treatment of gingivitis: A 2-week safety, dose-ranging, proof-of-principle randomized trial.	Hasturk H, Steed D, Tosun E, Martins M, Floros C, Nguyen D, Stephens D, Cugini M, Starr J, Van Dyke TE.	J Periodontol	10.1002/jper.20-0800	2021
	Importance of Mechanical Periodontal Therapy in Patients with Diabetes Type 2 and Periodontitis.	Naiff P, Carneiro V, Guimaraes MDC.	Int J Dent	10.1155/2018/6924631	2018
	Accidentally induced periodontitis in primary dentition: longitudinal examinations of periodontal bacteria and clinical conditions.	Ooshima T, Nishiyama N, Tamura K.	Int J Paediatr Dent	10.1046/j.1365-263x.2003.00451.x	2003
	Alterations in oral microbial flora induced by waterpipe tobacco smoking.	Shakhatreh MAK, Khabour OF, Alzoubi KH, Masadeh MM, Hussein EI, Bshara GN.	Int J Gen Med	10.2147/ijgm.s150553	2018
	Clinical and microbiologic changes after removal of orthodontic appliances.	Sallum EJ, Nouer DF, Klein MI, Goncalves RB, Machion L, Wilson Sallum A, Sallum EA.	Am J Orthod Dentofacial Orthop	10.1016/j.ajodo.2004.04.017	2004
	Periodontal Antibodies and All-Cause and Cardiovascular Disease Mortality.	Qi J, Zihang Z, Zhang J, Park YM, Shrestha D, Jianling B, Merchant AT.	J Dent Res	10.1177/0022034519884012	2020
Enzymology	Presence and antibiotic resistance of Porphyromonas gingivalis, Prevotella intermedia, and Prevotella nigrescens in children.	Sanai Y, Persson GR, Starr JR, Luis HS, Bernardo M, Leitao J, Roberts MC.	J Clin Periodontol	10.1034/j.1600-051x.2002.291008.x	2002
	Genetic heterogeneity in Prevotella intermedia, Prevotella nigrescens, Prevotella corporis and related species isolated from oral and nonoral sites.	Pearce MA, Devine DA, Dixon RA, van Steenbergen TJ.	Oral Microbiol Immunol	10.1034/j.1399-302x.2000.150204.x	2000
Enzymology	Inhibitory effects of green tea catechins on protein tyrosine phosphatase in Prevotella intermedia.	Okamoto M, Leung KP, Ansai T, Sugimoto A, Maeda N.	Oral Microbiol Immunol	10.1034/j.1399-302x.2003.00056.x	2003
Enzymology	Frequency and levels of candidate endodontic pathogens in acute apical abscesses as compared to asymptomatic apical periodontitis.	Rocas IN, Siqueira JF.	PLoS One	10.1371/journal.pone.0190469	2018
Metabolism	Glucose metabolism by Prevotella intermedia and Prevotella nigrescens.	Takahashi N, Yamada T.	Oral Microbiol Immunol	10.1034/j.1399-302x.2000.150307.x	2000
	Periodontal pathogens in subgingival plaque of HIV-positive subjects with chronic periodontitis.	Patel M, Coogan M, Galpin JS.	Oral Microbiol Immunol	10.1034/j.1399-302x.2003.00064.x	2003
	Dysbiosis and structural disruption of the respiratory microbiota in COVID-19 patients with severe and fatal outcomes.	Hernandez-Teran A, Mejia-Nepomuceno F, Herrera MT, Barreto O, Garcia E, Castillejos M, Boukadida C, Matias-Florentino M, Rincon-Rubio A, Avila-Rios S, Mujica-Sanchez M, Serna-Munoz R, Becerril-Vargas E, Guadarrama-Perez C, Ahumada-Topete VH, Rodriguez-Llamazares S, Martinez-Orozco JA, Salas-Hernandez J, Perez-Padilla R, Vazquez-Perez JA.	Sci Rep	10.1038/s41598-021-00851-0	2021
	Hemolytic and hemagglutinating activities of Prevotella intermedia and Prevotella nigrescens.	Okamoto M, Maeda N, Kondo K, Leung KP.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb08691.x	1999
	Periodontal disease and coronary heart disease: a reappraisal of the exposure.	Beck JD, Eke P, Heiss G, Madianos P, Couper D, Lin D, Moss K, Elter J, Offenbacher S.	Circulation	10.1161/circulationaha.104.511998	2005
Genetics	Specific clones of Trichomonas tenax are associated with periodontitis.	Benabdelkader S, Andreani J, Gillet A, Terrer E, Pignoly M, Chaudet H, Aboudharam G, La Scola B.	PLoS One	10.1371/journal.pone.0213338	2019
	Herpesviral-bacterial interactions in aggressive periodontitis.	Kamma JJ, Slots J.	J Clin Periodontol	10.1034/j.1600-051x.2003.20002.x	2003
	The subgingival microflora in phenytoin-induced gingival hyperplasia.	Takada K, Sugiyama H, Umezawa K, Mega J, Hirasawa M.	J Periodontal Res	10.1034/j.1600-0765.2003.00676.x	2003
Enzymology	Contribution of periodontal pathogens on tongue dorsa analyzed with real-time PCR to oral malodor.	Tanaka M, Yamamoto Y, Kuboniwa M, Nonaka A, Nishida N, Maeda K, Kataoka K, Nagata H, Shizukuishi S.	Microbes Infect	10.1016/j.micinf.2004.05.021	2004
	Association between numbers of decayed teeth and HbA1c in Japanese patients with type 2 diabetes mellitus.	Yonekura S, Usui M, Murano S.	Ups J Med Sci	10.1080/03009734.2017.1285838	2017
	Localized aggressive periodontitis in primary dentition: a case report.	Suzuki J, Okada M, Wang Y, Nii N, Miura K, Kozai K.	J Periodontol	10.1902/jop.2003.74.7.1060	2003
	Invasion of human cultured cells by Prevotella nigrescens.	Pantanella F, Petrone G, Passariello C, Selan L, Thaller MC, Valenti P.	Int J Immunopathol Pharmacol	10.1177/205873929901200306	1999
Metabolism	Comparison of clinical parameters, microbiological effects and calprotectin counts in gingival crevicular fluid between Er: YAG laser and conventional periodontal therapies: A split-mouth, single-blinded, randomized controlled trial.	Wang Y, Li W, Shi L, Zhang F, Zheng S.	Medicine (Baltimore)	10.1097/md.0000000000009367	2017
Metabolism	Pathways for amino acid metabolism by Prevotella intermedia and Prevotella nigrescens.	Takahashi N, Yamada T.	Oral Microbiol Immunol	10.1034/j.1399-302x.2000.150205.x	2000
Enzymology	The distribution of periodontopathic bacteria among Japanese children and their parents.	Umeda M, Miwa Z, Takeuchi Y, Ishizuka M, Huang Y, Noguchi K, Tanaka M, Takagi Y, Ishikawa I.	J Periodontal Res	10.1111/j.1600-0765.2004.00754.x	2004
Enzymology	The microbial outcome observed with polymerase chain reaction in subjects with recurrent periodontal disease following local treatment with 25% metronidazole gel.	Jansson H, Hamberg K, Soderholm G, Bratthall G.	Swed Dent J		2004
Metabolism	Detection of cfxA2, cfxA3, and cfxA6 genes in beta-lactamase producing oral anaerobes.	Binta B, Patel M.	J Appl Oral Sci	10.1590/1678-775720150469	2016
Pathogenicity	Initial antimicrobial effect of controlled-release doxycycline in subgingival sites.	Jorgensen MG, Safarian A, Daneshmand N, Keim RJ, Slots J.	J Periodontal Res	10.1111/j.1600-0765.2004.00742.x	2004
Pathogenicity	Decreased Hemoglobin Concentration and Iron Metabolism Disorder in Periodontitis: Systematic Review and Meta-Analysis.	Wu D, Lin Z, Zhang S, Cao F, Liang D, Zhou X.	Front Physiol	10.3389/fphys.2019.01620	2019
	Clustering of Subgingival Microbiota Reveals Microbial Disease Ecotypes Associated with Clinical Stages of Periodontitis in a Cross-Sectional Study.	Boutin S, Hagenfeld D, Zimmermann H, El Sayed N, Hopker T, Greiser HK, Becher H, Kim TS, Dalpke AH.	Front Microbiol	10.3389/fmicb.2017.00340	2017
	Identical clonal types of Porphyromonas gingivalis or Prevotella nigrescens recovered from infected root canals and subgingival plaque.	Goncalves RB, Robitaille M, Mouton C.	Oral Microbiol Immunol	10.1034/j.1399-302x.1999.140310.x	1999
	Efficacy of chlorhexidine and green tea mouthwashes in the management of dental plaque-induced gingivitis: A comparative clinical study.	Priya BM, Anitha V, Shanmugam M, Ashwath B, Sylva SD, Vigneshwari SK.	Contemp Clin Dent	10.4103/0976-237x.169845	2015
	Multiple conversion between the genes encoding bacterial class-I release factors.	Ishikawa SA, Kamikawa R, Inagaki Y.	Sci Rep	10.1038/srep12406	2015
	Gingival crevice microbiota from Chinese patients with gingivitis or necrotizing ulcerative gingivitis.	Gmur R, Wyss C, Xue Y, Thurnheer T, Guggenheim B.	Eur J Oral Sci	10.1111/j.0909-8836.2004.00103.x	2004
	Microbiological profile of early onset/aggressive periodontitis patients.	Kamma JJ, Nakou M, Gmur R, Baehni PC.	Oral Microbiol Immunol	10.1111/j.1399-302x.2004.00161.x	2004
	Electrospun PLA Fibers Containing Metronidazole for Periodontal Disease.	Budai-Szucs M, Leber A, Cui L, Jozo M, Valyi P, Burian K, Kirschweng B, Csanyi E, Pukanszky B.	Drug Des Devel Ther	10.2147/dddt.s231748	2020
	Microbiomes and Resistomes in Biopsy Tissue and Intestinal Lavage Fluid of Colorectal Cancer.	Yuan Y, Chen Y, Yao F, Zeng M, Xie Q, Shafiq M, Noman SM, Jiao X.	Front Cell Dev Biol	10.3389/fcell.2021.736994	2021
Phylogeny	Microbiologic profile of endodontic infections from HIV- and HIV+ patients using multiple-displacement amplification and checkerboard DNA-DNA hybridization.	Brito LC, Sobrinho AP, Teles RP, Socransky SS, Haffajee AD, Vieira LQ, Teles FR.	Oral Dis	10.1111/j.1601-0825.2012.01908.x	2012
Metabolism	DING Proteins Extend to the Extremophilic World.	Porzio E, Faraone Mennella MR, Manco G.	Int J Mol Sci	10.3390/ijms22042035	2021
	Serum IgG Antibodies against Periodontal Microbes and Cancer Mortality.	Zhong Z, Jin Q, Zhang J, Park YM, Shrestha D, Bai J, Merchant AT.	JDR Clin Trans Res	10.1177/2380084419859484	2020
	An in vitro evaluation of the antibacterial properties of barriers used in guided tissue regeneration.	Chogle S, Mickel AK.	J Endod	10.1097/00004770-200301000-00001	2003
Pathogenicity	Significant effect of HIV/HAART on oral microbiota using multivariate analysis.	Griffen AL, Thompson ZA, Beall CJ, Lilly EA, Granada C, Treas KD, DuBois KR, Hashmi SB, Mukherjee C, Gilliland AE, Vazquez JA, Hagensee ME, Leys EJ, Fidel PL.	Sci Rep	10.1038/s41598-019-55703-9	2019
Pathogenicity	Selection for high-level resistance by chronic triclosan exposure is not universal.	McBain AJ, Ledder RG, Sreenivasan P, Gilbert P.	J Antimicrob Chemother	10.1093/jac/dkh168	2004
	Specific antibiotics in the treatment of periodontitis--a proposed strategy.	Beikler T, Prior K, Ehmke B, Flemmig TF.	J Periodontol	10.1902/jop.2004.75.1.169	2004
	Distribution of erm(F) and tet(Q) genes in 4 oral bacterial species and genotypic variation between resistant and susceptible isolates.	Chung WO, Gabany J, Persson GR, Roberts MC.	J Clin Periodontol	10.1034/j.1600-051x.2002.290210.x	2002
Pathogenicity	Coptidis rhizoma inhibits growth and proteases of oral bacteria.	Hu JP, Takahashi N, Yamada T.	Oral Dis	10.1111/j.1601-0825.2000.tb00142.x	2000
	The Efficacy of Green Tea Chewing Gum on Gingival Inflammation.	Behfarnia P, Aslani A, Jamshidian F, Noohi S.	J Dent (Shiraz)		2016
	Pathogenicity of facultative and obligate anaerobic bacteria in monoculture and combined with either Prevotella intermedia or Prevotella nigrescens.	Siqueira JF, Magalhaes FA, Lima KC, de Uzeda M.	Oral Microbiol Immunol	10.1111/j.1399-302x.1998.tb00693.x	1998
Genetics	The subgingival microbiome associated with periodontitis in type 2 diabetes mellitus.	Shi B, Lux R, Klokkevold P, Chang M, Barnard E, Haake S, Li H.	ISME J	10.1038/s41396-019-0544-3	2020
	Sensitivity and specificity of subgingival bacteria in predicting preterm birth- a pilot cohort study.	Hassan KS, El Tantawi MM, Alagl AS, Alnimr AM, Haseeb YA.	Int J Health Sci (Qassim)	10.12816/0049657	2016
	Possible potentiation of toxins from Prevotella intermedia, Prevotella nigrescens, and Porphyromonas gingivalis by cotinine.	Sayers NM, James JA, Drucker DB, Blinkhorn AS.	J Periodontol	10.1902/jop.1999.70.11.1269	1999
	Periodontal infections and pre-term low birth weight: a case-control study.	Buduneli N, Baylas H, Buduneli E, Turkoglu O, Kose T, Dahlen G.	J Clin Periodontol	10.1111/j.1600-051x.2005.00670.x	2005
	Human gut, breast, and oral microbiome in breast cancer: A systematic review and meta-analysis.	Thu MS, Chotirosniramit K, Nopsopon T, Hirankarn N, Pongpirul K.	Front Oncol	10.3389/fonc.2023.1144021	2023
	Medicinal plants for gingivitis: a review of clinical trials.	Safiaghdam H, Oveissi V, Bahramsoltani R, Farzaei MH, Rahimi R.	Iran J Basic Med Sci	10.22038/ijbms.2018.31997.7690	2018
Metabolism	Relationship between periodontal pocket sulfide levels and subgingival species.	Torresyap G, Haffajee AD, Uzel NG, Socransky SS.	J Clin Periodontol	10.1034/j.1600-051x.2003.00377.x	2003
Enzymology	Sodium dodecyl sulfate-polyacrylamide gel electrophoresis and polymerase chain reaction for differentiation of Prevotella intermedia and Prevotella nigrescens.	Baumgartner JC, Bae KS, Xia T, Whitt J, David LL.	J Endod	10.1016/s0099-2399(06)81164-7	1999
	The haybiome: Characterising the viable bacterial community profile of four different hays for horses following different pre-feeding regimens.	Daniels S, Hepworth J, Moore-Colyer M.	PLoS One	10.1371/journal.pone.0242373	2020
	Vaginal Microbiota and Cytokine Microenvironment in HPV Clearance/Persistence in Women Surgically Treated for Cervical Intraepithelial Neoplasia: An Observational Prospective Study.	Caselli E, D'Accolti M, Santi E, Soffritti I, Conzadori S, Mazzacane S, Greco P, Contini C, Bonaccorsi G.	Front Cell Infect Microbiol	10.3389/fcimb.2020.540900	2020
	RAPD fingerprinting for the distinction of Prevotella intermedia sensu stricto from Prevotella nigrescens.	Paquet C, Mouton C.	Anaerobe	10.1006/anae.1997.0077	1997
	Comparative clinical and microbiological effects of subgingival metronidazole application in adult periodontitis; 12-months results.	Buduneli E, Tunger A, Evrenosoglu E, Bilgic A.	J Int Acad Periodontol		2001
Phylogeny	The localization of periodontal-disease-associated bacteria in human periodontal pockets.	Noiri Y, Li L, Ebisu S.	J Dent Res	10.1177/00220345010800101301	2001
	A New Controlled-Release Material Containing Metronidazole and Doxycycline for the Treatment of Periodontal and Peri-Implant Diseases: Formulation and In Vitro Testing.	Nastri L, De Rosa A, De Gregorio V, Grassia V, Donnarumma G.	Int J Dent	10.1155/2019/9374607	2019
	Differences in the subgingival microbiota of Swedish and USA subjects who were periodontally healthy or exhibited minimal periodontal disease.	Haffajee AD, Japlit M, Bogren A, Kent RL, Goodson JM, Socransky SS.	J Clin Periodontol	10.1111/j.1600-051x.2004.00624.x	2005
	Microbiota of severe early childhood caries before and after therapy.	Tanner AC, Kent RL, Holgerson PL, Hughes CV, Loo CY, Kanasi E, Chalmers NI, Johansson I.	J Dent Res	10.1177/0022034511421201	2011
Pathogenicity	Citrate promotes attachment of Prevotella nigrescens (intermedia) ATCC 25261 to hydroxyapatite.	Hirano Y, Kuroda K, Tamura M, Oguma H, Hayashi K.	J Oral Sci	10.2334/josnusd.40.65	1998
Pathogenicity	Oral Microbiota Perturbations Are Linked to High Risk for Rheumatoid Arthritis.	Tong Y, Zheng L, Qing P, Zhao H, Li Y, Su L, Zhang Q, Zhao Y, Luo Y, Liu Y.	Front Cell Infect Microbiol	10.3389/fcimb.2019.00475	2019
Phylogeny	Identification of microbiota in peri-implantitis pockets by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.	Yeh HC, Lu JJ, Chang SC, Ge MC.	Sci Rep	10.1038/s41598-018-37450-5	2019
	Long-Term Fluctuation of Oral Biofilm Microbiota following Different Dietary Phases.	Anderson AC, Rothballer M, Altenburger MJ, Woelber JP, Karygianni L, Vach K, Hellwig E, Al-Ahmad A.	Appl Environ Microbiol	10.1128/aem.01421-20	2020
Enzymology	beta-Lactamase-producing strains in the species Prevotella intermedia and Prevotella nigrescens.	Bernal LA, Guillot E, Paquet C, Mouton C.	Oral Microbiol Immunol	10.1111/j.1399-302x.1998.tb00748.x	1998
Pathogenicity	Cytotoxicity and Antimicrobial Activity of Oral Rinses In Vitro.	Muller HD, Eick S, Moritz A, Lussi A, Gruber R.	Biomed Res Int	10.1155/2017/4019723	2017
Enzymology	Identification of a lactoferrin-binding protein in Prevotella nigrescens.	de Lillo A, Fierro JF.	FEMS Microbiol Lett	10.1111/j.1574-6968.1997.tb10350.x	1997
Enzymology	Incidence of Prevotella intermedia and Prevotella nigrescens in periodontal health and disease.	Maeda N, Okamoto M, Kondo K, Ishikawa H, Osada R, Tsurumoto A, Fujita H.	Microbiol Immunol	10.1111/j.1348-0421.1998.tb02328.x	1998
Enzymology	[Identification of periodontopathic bacteria DNA from periodontitis-involved gingival tissue using a PCR method].	Ishizuka M.	Kokubyo Gakkai Zasshi	10.5357/koubyou.69.15	2002
	Antimicrobial Activity of Essential Oil of Baccharis dracunculifolia DC (Asteraceae) Aerial Parts at Flowering Period.	Cazella LN, Glamoclija J, Sokovic M, Goncalves JE, Linde GA, Colauto NB, Gazim ZC.	Front Plant Sci	10.3389/fpls.2019.00027	2019
	Distribution of the tetracycline resistance determinant tetQ gene in oral isolates of black-pigmented anaerobes in Japan.	Okamoto M, Takano K, Maeda N.	Oral Microbiol Immunol	10.1034/j.1399-302x.2001.160405.x	2001
	Detection of hydrogen cyanide from oral anaerobes by cavity ring down spectroscopy.	Chen W, Roslund K, Fogarty CL, Pussinen PJ, Halonen L, Groop PH, Metsala M, Lehto M.	Sci Rep	10.1038/srep22577	2016
	The Herbal Formula CWBSD Improves Sleep Quality Dependent on Oral Microbial Type and Tongue Diagnostic Features in Insomnia.	Kim MJ, Bose S, Shin NR, Park S, Kwon O, Song EJ, Nam YD, Koo BS, Nam DH, Lee JH, Kim H.	J Pers Med	10.3390/jpm11050325	2021
	Periodontal disease-associated micro-organisms in peri-menopausal and post-menopausal women using or not using hormone replacement therapy. A two-year follow-up study.	Tarkkila L, Kari K, Furuholm J, Tiitinen A, Meurman JH.	BMC Oral Health	10.1186/1472-6831-10-10	2010
	Changes in oral microbiota due to orthodontic appliances: a systematic review.	Lucchese A, Bondemark L, Marcolina M, Manuelli M.	J Oral Microbiol	10.1080/20002297.2018.1476645	2018
Enzymology	Prevalence of Fusobacterium necrophorum in Children Presenting with Pharyngitis.	Van TT, Cox LM, Cox ME, Dien Bard J.	J Clin Microbiol	10.1128/jcm.02174-16	2017
Enzymology	Molecular detection of black-pigmented bacteria in infections of endodontic origin.	Siqueira JF, Rocas IN, Oliveira JC, Santos KR.	J Endod	10.1097/00004770-200109000-00002	2001
Enzymology	Occurrence of Prevotella nigrescens and Prevotella intermedia in infections of endodontic origin.	Bae KS, Baumgartner JC, Shearer TR, David LL.	J Endod	10.1016/s0099-2399(97)80173-2	1997
	Periodontopathogens in the saliva and subgingival dental plaque of a group of mothers.	Rosa OP, da Silva SM, Costa B, Torres SA, Passanezi E.	Pesqui Odontol Bras	10.1590/s1517-74912002000400006	2002
	Definition, etiology, prevention and treatment of peri-implantitis--a review.	Smeets R, Henningsen A, Jung O, Heiland M, Hammacher C, Stein JM.	Head Face Med	10.1186/1746-160x-10-34	2014
Pathogenicity	Controlled-release of tetracycline and lovastatin by poly(D,L-lactide-co-glycolide acid)-chitosan nanoparticles enhances periodontal regeneration in dogs.	Lee BS, Lee CC, Wang YP, Chen HJ, Lai CH, Hsieh WL, Chen YW.	Int J Nanomedicine	10.2147/ijn.s94270	2016
Enzymology	Role of Porphyromonas gingivalis, Prevotella intermedia, and Prevotella nigrescens in extraoral and some odontogenic infections.	Matto J, Asikainen S, Vaisanen ML, Rautio M, Saarela M, Summanen P, Finegold S, Jousimies-Somer H.	Clin Infect Dis	10.1086/516205	1997
	Initial expression of the Papillon-Lefevre syndrome in consanguine family.	Singh AP, Chaitra TR, Singh SP, Kulkarni AU.	BMJ Case Rep	10.1136/bcr-2012-006313	2012
Phylogeny	Optimized oligonucleotides for the differentiation of Prevotella intermedia and Prevotella nigrescens.	Conrads G, Pelz K, Hughes B, Seyfarth I, Devine DA.	Oral Microbiol Immunol	10.1111/j.1399-302x.1997.tb00627.x	1997
	Microbiota around root-form endosseous implants: a review of the literature.	Heydenrijk K, Meijer HJ, van der Reijden WA, Raghoebar GM, Vissink A, Stegenga B.	Int J Oral Maxillofac Implants	10.1016/s0022-3913(03)00272-5	2002
	Lactoferrin, amylase and mucin MUC5B and their relation to the oral microflora in hyposalivation of different origins.	Almstahl A, Wikstrom M, Groenink J.	Oral Microbiol Immunol	10.1034/j.1399-302x.2001.160605.x	2001
	The formation of mixed culture biofilms of oral species along a gradient of shear stress.	Saunders KA, Greenman J.	J Appl Microbiol	10.1046/j.1365-2672.2000.01148.x	2000
	Root Canal Irrigation: Chemical Agents and Plant Extracts Against Enterococcus faecalis.	Borzini L, Condo R, De Dominicis P, Casaglia A, Cerroni L.	Open Dent J	10.2174/1874210601610010692	2016
	Microbiological, immunological and genetic factors in family members with periodontitis as a manifestation of systemic disease, associated with hematological disorders.	Okada M, Awane S, Suzuki J, Hino T, Takemoto T, Kurihara H, Miura K.	J Periodontal Res	10.1034/j.1600-0765.2002.00659.x	2002
Enzymology	Frequency of reactivity for Porphyromonas gingivalis and Prevotella spp. in supra- and subgingival plaques, and periodontal clinical parameters according to subject age.	Tanaka S, Murakami Y, Ogiwara T, Shoji M, Seto K, Nagasaki M, Fujisawa S.	J Periodontol	10.1902/jop.2002.73.8.877	2002
	Distinction of Prevotella intermedia and Prevotella nigrescens from endodontic bacteremia through their fatty acid contents.	Debelian GJ, Olsen I, Tronstad L.	Anaerobe	10.1006/anae.1997.0072	1997
	Treatment of Papillon-Lefèvre syndrome periodontitis.	Pacheco JJ, Coelho C, Salazar F, Contreras A, Slots J, Velazco CH.	J Clin Periodontol	10.1034/j.1600-051x.2002.290414.x	2002
	Relationship between the Oral and Vaginal Microbiota of South African Adolescents with High Prevalence of Bacterial Vaginosis.	Balle C, Esra R, Havyarimana E, Jaumdally SZ, Lennard K, Konstantinus IN, Barnabas SL, Happel AU, Gill K, Pidwell T, Lingappa JR, Gamieldien H, Bekker LG, Passmore JS, Jaspan HB.	Microorganisms	10.3390/microorganisms8071004	2020
Phylogeny	Clinical periodontal findings and microflora profiles in children with chronic neutropenia under supervised oral hygiene.	Okada M, Kobayashi M, Hino T, Kurihara H, Miura K.	J Periodontol	10.1902/jop.2001.72.7.945	2001
	Microbiological evaluation of acute periradicular abscesses by DNA-DNA hybridization.	Siqueira JF, Rocas IN, Souto R, Uzeda M, Colombo AP.	Oral Surg Oral Med Oral Pathol Oral Radiol Endod	10.1067/moe.2001.118620	2001
	Bioactive Surfaces vs. Conventional Surfaces in Titanium Dental Implants: A Comparative Systematic Review.	Lopez-Valverde N, Flores-Fraile J, Ramirez JM, Sousa BM, Herrero-Hernandez S, Lopez-Valverde A.	J Clin Med	10.3390/jcm9072047	2020
	Microbial risk markers for childhood caries in pediatricians' offices.	Kanasi E, Johansson I, Lu SC, Kressin NR, Nunn ME, Kent R, Tanner AC.	J Dent Res	10.1177/0022034509360010	2010
Phylogeny	Detection of putative oral pathogens in acute periradicular abscesses by 16S rDNA-directed polymerase chain reaction.	Siqueira JF, Rocas IN, Oliveira JC, Santos KR.	J Endod	10.1097/00004770-200103000-00004	2001
Pathogenicity	Effect of an oxygenating agent on oral bacteria in vitro and on dental plaque composition in healthy young adults.	Fernandez y Mostajo M, van der Reijden WA, Buijs MJ, Beertsen W, Van der Weijden F, Crielaard W, Zaura E.	Front Cell Infect Microbiol	10.3389/fcimb.2014.00095	2014
	Parotid salivary S-IgA antibodies during experimental gingivitis in smokers and non-smokers.	Lie MA, Myint MM, Schenck K, Timmerman MF, van der Velden U, van der Weijden GA, Loos BG.	J Periodontal Res	10.1034/j.1600-0765.2001.00360.x	2002
	Pathogenicity of Prevotella intermedia and Prevotella nigrescens isolates in a wound chamber model in rabbits.	Hafstrom C, Dahlen G.	Oral Microbiol Immunol	10.1111/j.1399-302x.1997.tb00371.x	1997
	Fecal Metabolome Signature in the HIV-1 Elite Control Phenotype: Enrichment of Dipeptides Acts as an HIV-1 Antagonist but a Prevotella Agonist.	Sperk M, Ambikan AT, Ray S, Singh K, Mikaeloff F, Diez RC, Narayanan A, Vesterbacka J, Nowak P, Sonnerborg A, Neogi U.	J Virol	10.1128/jvi.00479-21	2021
Enzymology	Measurement of proteases in human subgingival dental plaque by fluorescence polarization.	Grys EL, Schade SZ, Cohen ME, Geivelis M, Robinson PJ, Simonson LG.	Arch Oral Biol	10.1016/s0003-9969(00)00073-x	2000
	Periodontopathic bacterial infection in childhood.	Kimura S, Ooshima T, Takiguchi M, Sasaki Y, Amano A, Morisaki I, Hamada S.	J Periodontol	10.1902/jop.2002.73.1.20	2002
Phylogeny	Prevotella intermedia and Prevotella nigrescens serotypes, ribotypes and binding characteristics.	Dahlen GG, Johnson JR, Gmur R.	FEMS Microbiol Lett	10.1111/j.1574-6968.1996.tb08140.x	1996
Metabolism	The prevalence of fimA genotypes of Porphyromonas gingivalis in patients with chronic periodontitis: A meta-analysis.	Wang H, Zhang W, Wang W, Zhang L.	PLoS One	10.1371/journal.pone.0240251	2020
	Quantitative and qualitative analysis of microorganisms in root-filled teeth with persistent infection: Monitoring of the endodontic retreatment.	Endo MS, Ferraz CCR, Zaia AA, Almeida JFA, Gomes BPFA.	Eur J Dent	10.4103/1305-7456.115414	2013
Pathogenicity	Evaluation of the antimicrobial effect of lactoferrin on Porphyromonas gingivalis, Prevotella intermedia and Prevotella nigrescens.	Aguilera O, Andres MT, Heath J, Fierro JF, Douglas CW.	FEMS Immunol Med Microbiol	10.1111/j.1574-695x.1998.tb01146.x	1998
Enzymology	Intra-familial transmission and distribution of Prevotella intermedia and Prevotella nigrescens.	van Steenbergen TJ, Bosch-Tijhof CJ, Petit MD, Van der Velden U.	J Periodontal Res	10.1111/j.1600-0765.1997.tb00543.x	1997
	Microflora in oral ecosystems in primary Sjögren's syndrome.	Almstahl A, Wikstrom M, Kroneld U.	J Rheumatol		2001
Metabolism	Binding and degradation of lactoferrin by Porphyromonas gingivalis, Prevotella intermedia and Prevotella nigrescens.	de Lillo A, Teanpaisan R, Fierro JF, Douglas CW.	FEMS Immunol Med Microbiol	10.1111/j.1574-695x.1996.tb00280.x	1996
Enzymology	Association between periodontal condition and subgingival microbiota in women during pregnancy: a longitudinal study.	Borgo PV, Rodrigues VA, Feitosa AC, Xavier KC, Avila-Campos MJ.	J Appl Oral Sci	10.1590/1678-775720140164	2014
	Periodontal health awareness among gynecologists in Riyadh, Saudi Arabia.	Rahman G, Asa'ad F, Baseer MA.	J Int Soc Prev Community Dent	10.4103/2231-0762.159959	2015
	Clinical and microbiological evaluation of ligature-induced peri-implantitis and periodontitis in dogs.	Nociti FH, Cesco De Toledo R, Machado MA, Stefani CM, Line SR, Goncalves RB.	Clin Oral Implants Res	10.1034/j.1600-0501.2001.012004295.x	2001
	A comparative evaluation of the efficacy of probiotic and chlorhexidine mouthrinses on clinical inflammatory parameters of gingivitis: A randomized controlled clinical study.	Nadkerny PV, Ravishankar PL, Pramod V, Agarwal LA, Bhandari S.	J Indian Soc Periodontol	10.4103/0972-124x.168491	2015
Phylogeny	Relationship of periodontopathic bacteria with early-onset periodontitis in Down's syndrome.	Amano A, Kishima T, Akiyama S, Nakagawa I, Hamada S, Morisaki I.	J Periodontol	10.1902/jop.2001.72.3.368	2001
	Emerging trends of herbal care in dentistry.	Kumar G, Jalaluddin M, Rout P, Mohanty R, Dileep CL.	J Clin Diagn Res	10.7860/jcdr/2013/6339.3282	2013
	Green synthesis of titanium dioxide nanoparticles with volatile oil of Eugenia caryophyllata for enhanced antimicrobial activities.	Abdul Jalill RD.	IET Nanobiotechnol	10.1049/iet-nbt.2017.0139	2018
	Advanced Strategies for Enhancing the Biocompatibility and Antibacterial Properties of Implantable Structures.	Mishchenko O, Volchykhina K, Maksymov D, Manukhina O, Pogorielov M, Pavlenko M, Iatsunskyi I.	Materials (Basel)	10.3390/ma18040822	2025
Metabolism	Influence of Dental Restorations on Oxidative Stress in Gingival Crevicular Fluid.	Taso E, Stefanovic V, Stevanovic I, Vojvodic D, Topic A, Petkovic-Curcin A, Obradovic-Djuricic K, Markovic A, Djukic M, Vujanovic D.	Oxid Med Cell Longev	10.1155/2018/1823189	2018
	The Microbiome of Peri-Implantitis: A Systematic Review and Meta-Analysis.	Sahrmann P, Gilli F, Wiedemeier DB, Attin T, Schmidlin PR, Karygianni L.	Microorganisms	10.3390/microorganisms8050661	2020
	Manganese Oxide Nanozyme-Doped Diatom for Safe and Efficient Treatment of Peri-Implantitis.	Lee EH, Lee SW, Seo Y, Deng YH, Lim YJ, Kwon HB, Park K, Kong H, Kim MJ.	ACS Appl Mater Interfaces	10.1021/acsami.2c05166	2022
Pathogenicity	Inhibition of Actinobacillus actinomycetemcomitans leukotoxicity by bacteria from the subgingival flora.	Johansson A, Hanstrom L, Kalfas S.	Oral Microbiol Immunol	10.1034/j.1399-302x.2000.150402.x	2000
	A potential therapeutic strategy for prostatic disease by targeting the oral microbiome.	Fang C, Wu L, Zhu C, Xie WZ, Hu H, Zeng XT.	Med Res Rev	10.1002/med.21778	2021
Pathogenicity	Antibacterial effects of sodium tripolyphosphate against Porphyromonas species associated with periodontitis of companion animals.	Lee JH, Moon JH, Ryu JI, Kang SW, Kwack KH, Lee JY.	J Vet Sci	10.4142/jvs.2019.20.e33	2019
Phylogeny	Characterization of Prevotella intermedia and Prevotella nigrescens by enzyme production, restriction endonuclease and ribosomal RNA gene restriction analyses.	Pearce MA, Dixon RA, Gharbia SE, Shah HN, Devine DA.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00348.x	1996
Enzymology	Similarity of salivary and subgingival Prevotella intermedia and Prevotella nigrescens isolates by arbitrarily primed polymerase chain reaction.	Matto J, Saarela M, von Troil-Linden B, Alaluusua S, Jousimies-Somer H, Asikainen S.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00201.x	1996
	Clonality of Porphyromonas gingivalis, Prevotella intermedia and Prevotella nigrescens isolated from periodontally diseased and healthy sites.	Teanpaisan R, Douglas CW, Eley AR, Walsh TF.	J Periodontal Res	10.1111/j.1600-0765.1996.tb00511.x	1996
	An examination of 'unidentified' Prevotella (formerly PINLO) using RAPD-PCR and partial 16S rRNA gene sequencing.	Robertson KL, Blinkhorn AS, Davies RM, Drucker DB.	Anaerobe	10.1006/anae.1999.0331	2000
	The Prevotella intermedia group organisms in young children and their mothers as related to maternal periodontal status.	Kononen E, Wolf J, Matto J, Frandsen EV, Poulsen K, Jousimies-Somer H, Asikainen S.	J Periodontal Res	10.1034/j.1600-0765.2000.035006329.x	2000
	Herpesviruses in human periodontal disease.	Contreras A, Slots J.	J Periodontal Res	10.1034/j.1600-0765.2000.035001003.x	2000
	The Oral Bacterial Microbiome of Interdental Surfaces in Adolescents According to Carious Risk.	Inquimbert C, Bourgeois D, Bravo M, Viennot S, Tramini P, Llodra JC, Molinari N, Dussart C, Giraudeau N, Carrouel F.	Microorganisms	10.3390/microorganisms7090319	2019
	Evaluation of the Bactericidal Activity on Oral Organisms of the Nd-YAP Laser In Vitro.	Rochd T, Calas P, Roques C.	Lasers Med Sci	10.1007/s101030050010	1998
	Prevalence of periodontal pathogens in localized and generalized forms of early-onset periodontitis.	Mullally BH, Dace B, Shelburne CE, Wolff LF, Coulter WA.	J Periodontal Res	10.1034/j.1600-0765.2000.035004232.x	2000
	Effect of Camphylobacter rectus on Serum Iron and Transferrin- In-Vivo Findings.	Medikeri RS, Lele SV, Mali PP, Jain PM, Darawade DA, Medikeri MR.	J Clin Diagn Res	10.7860/jcdr/2015/14165.6189	2015
	Effects of adjunctive daily phototherapy on chronic periodontitis: a randomized single-blind controlled trial.	Jung GU, Kim JW, Kim SJ, Pang EK.	J Periodontal Implant Sci	10.5051/jpis.2014.44.6.280	2014
	Oral Microbial Species and Virulence Factors Associated with Oral Squamous Cell Carcinoma.	Torralba MG, Aleti G, Li W, Moncera KJ, Lin YH, Yu Y, Masternak MM, Golusinski W, Golusinski P, Lamperska K, Edlund A, Freire M, Nelson KE.	Microb Ecol	10.1007/s00248-020-01596-5	2021
Pathogenicity	Characterization of the lactoferrin-dependent inhibition of the adhesion of Actinobacillus actinomycetemcomitans, Prevotella intermedia and Prevotella nigrescens to fibroblasts and to a reconstituted basement membrane.	Alugupalli KR, Kalfas S.	APMIS	10.1111/j.1699-0463.1997.tb05071.x	1997
	Dysbiosis in chronic periodontitis: Key microbial players and interactions with the human host.	Deng ZL, Szafranski SP, Jarek M, Bhuju S, Wagner-Dobler I.	Sci Rep	10.1038/s41598-017-03804-8	2017
Phylogeny	Identification of periodontal disease-associated bacteria in the "plaque-free zone".	Noiri Y, Ebisu S.	J Periodontol	10.1902/jop.2000.71.8.1319	2000
	Distinct maternal microbiota clusters are associated with diet during pregnancy: impact on neonatal microbiota and infant growth during the first 18 months of life.	Garcia-Mantrana I, Selma-Royo M, Gonzalez S, Parra-Llorca A, Martinez-Costa C, Collado MC.	Gut Microbes	10.1080/19490976.2020.1730294	2020
	Black-pigmented anaerobic rods in closed periapical lesions.	Bogen G, Slots J.	Int Endod J	10.1046/j.1365-2591.1999.00216.x	1999
Phylogeny	The microbial community shifts of subgingival plaque in patients with generalized aggressive periodontitis following non-surgical periodontal therapy: a pilot study.	Han J, Wang P, Ge S.	Oncotarget	10.18632/oncotarget.12532	2017
	Electronic Cigarette Aerosol Modulates the Oral Microbiome and Increases Risk of Infection.	Pushalkar S, Paul B, Li Q, Yang J, Vasconcelos R, Makwana S, Gonzalez JM, Shah S, Xie C, Janal MN, Queiroz E, Bederoff M, Leinwand J, Solarewicz J, Xu F, Aboseria E, Guo Y, Aguallo D, Gomez C, Kamer A, Shelley D, Aphinyanaphongs Y, Barber C, Gordon T, Corby P, Li X, Saxena D.	iScience	10.1016/j.isci.2020.100884	2020
Phylogeny	Early microbial succession in redeveloping dental biofilms in periodontal health and disease.	Teles FR, Teles RP, Uzel NG, Song XQ, Torresyap G, Socransky SS, Haffajee AD.	J Periodontal Res	10.1111/j.1600-0765.2011.01409.x	2012
	Microbial findings at failing implants.	Leonhardt A, Renvert S, Dahlen G.	Clin Oral Implants Res	10.1034/j.1600-0501.1999.100501.x	1999
	Antimicrobial properties and dental pulp stem cell cytotoxicity using carboxymethyl cellulose-silver nanoparticles deposited on titanium plates.	Laredo-Naranjo MA, Carrillo-Gonzalez R, De La Garza-Ramos MA, Garza-Navarro MA, Torre-Martinez HHH, Del Angel-Mosqueda C, Mercado-Hernandez R, Carrillo-Fuentevilla R.	Acta Biomater Odontol Scand	10.3109/23337931.2016.1160783	2016
	Association of black-pigmented bacteria with endodontic infections.	Baumgartner JC, Watkins BJ, Bae KS, Xia T.	J Endod	10.1016/s0099-2399(99)80268-4	1999
	Antibacterial Properties of Nanoparticles in Dental Restorative Materials. A Systematic Review and Meta-Analysis.	Ferrando-Magraner E, Bellot-Arcis C, Paredes-Gallardo V, Almerich-Silla JM, Garcia-Sanz V, Fernandez-Alonso M, Montiel-Company JM.	Medicina (Kaunas)	10.3390/medicina56020055	2020
	Oral microflora in subjects with reduced salivary secretion.	Almstahl A, Wikstrom M.	J Dent Res	10.1177/00220345990780080601	1999
	One-year compliance and effects of amine and stannous fluoride on some salivary biochemical constituents and oral microbes in institutionalized elderly.	Meurman JH, Kari K, Aikas A, Kallio P.	Spec Care Dentist	10.1111/j.1754-4505.2001.tb00221.x	2001
Enzymology	Bacterial profile of aggressive periodontitis in Morocco: a cross-sectional study.	Chahboun H, Arnau MM, Herrera D, Sanz M, Ennibi OK.	BMC Oral Health	10.1186/s12903-015-0006-x	2015
	Nanotechnology in dentistry: Present and future perspectives on dental nanomaterials.	Jandt KD, Watts DC.	Dent Mater	10.1016/j.dental.2020.08.006	2020
Phylogeny	Confirmation of the species Prevotella intermedia and Prevotella nigrescens.	Frandsen EV, Poulsen K, Kilian M.	Int J Syst Bacteriol	10.1099/00207713-45-3-429	1995
	A proteolytically activated antimicrobial toxin encoded on a mobile plasmid of Bacteroidales induces a protective response.	Evans JC, McEneany VL, Coyne MJ, Caldwell EP, Sheahan ML, Von SS, Coyne EM, Tweten RK, Comstock LE.	Nat Commun	10.1038/s41467-022-31925-w	2022
Enzymology	Purification and functional analysis of the DnaK homologue from Prevotella intermedia OMZ 326.	Kadri R, Devine D, Ashraf W.	FEMS Microbiol Lett	10.1111/j.1574-6968.1998.tb13208.x	1998
Enzymology	Black-pigmented bacteria in coronal and apical segments of infected root canals.	Dougherty WJ, Bae KS, Watkins BJ, Baumgartner JC.	J Endod	10.1016/s0099-2399(98)80134-9	1998
	Microbiological features of Papillon-Lefèvre syndrome periodontitis.	Velazco CH, Coelho C, Salazar F, Contreras A, Slots J, Pacheco JJ.	J Clin Periodontol	10.1034/j.1600-051x.1999.260910.x	1999
	Changes in the subgingival biofilm composition after coronally positioned flap.	Lima JA, Santos VR, Feres M, de Figueiredo LC, Duarte PM.	J Appl Oral Sci	10.1590/s1678-77572011000100014	2011
Enzymology	Species-specificity of monoclonal antibodies recognising Prevotella intermedia and Prevotella nigrescens.	Devine DA, Pearce MA, Gharbia SE, Shah HN, Dixon RA, Gmur R.	FEMS Microbiol Lett	10.1111/j.1574-6968.1994.tb07014.x	1994
	Maternal periodontitis and prematurity. Part II: Maternal infection and fetal exposure.	Madianos PN, Lieff S, Murtha AP, Boggess KA, Auten RL, Beck JD, Offenbacher S.	Ann Periodontol	10.1902/annals.2001.6.1.175	2001
Pathogenicity	Change in subgingival microbial profiles in adult periodontitis subjects receiving either systemically-administered amoxicillin or metronidazole.	Feres M, Haffajee AD, Allard K, Som S, Socransky SS.	J Clin Periodontol	10.1034/j.1600-051x.2001.028007597.x	2001
Pathogenicity	A review of novel bacterial complex lipids: implications for the pathogenesis of apical periodontitis.	Zhu Q.	Iran Endod J		2010
Enzymology	Interdental supragingival plaque--a natural habitat of Actinobacillus actinomycetemcomitans, Bacteroides forsythus, Campylobacter rectus, and Prevotella nigrescens.	Gmur R, Guggenheim B.	J Dent Res	10.1177/00220345940730080501	1994
Phylogeny	Oligonucleotide probes to the 16S ribosomal RNA: implications of sequence homology and secondary structure with particular reference to the oral species Prevotella intermedia and Prevotella nigrescens.	Shah HN, Gharbia SE, Scully C, Finegold SM.	Oral Dis	10.1111/j.1601-0825.1995.tb00154.x	1995
Enzymology	An investigation into the use of SDS-PAGE of cell surface extracts and proteolytic activity to differentiate Prevotella nigrescens and Prevotella intermedia.	Cookson AL, Wray A, Handley PS, Jacob AE.	FEMS Microbiol Lett	10.1111/j.1574-6968.1996.tb08035.x	1996
Enzymology	Microbial composition of supra- and subgingival plaque in subjects with adult periodontitis.	Ximenez-Fyvie LA, Haffajee AD, Socransky SS.	J Clin Periodontol	10.1034/j.1600-051x.2000.027010722.x	2000
	Preterm low birthweight and the role of oral bacteria.	Shira Davenport E.	J Oral Microbiol	10.3402/jom.v2i0.5779	2010
	Ribotyping of bacteria from root canal and blood of patients receiving endodontic therapy.	Debelian GJ, Eribe ER, Olsen I, Tronstad L.	Anaerobe	10.1006/anae.1997.0108	1997
Enzymology	The utility of whole saliva to detect the oral presence of periodontopathic bacteria.	Umeda M, Contreras A, Chen C, Bakker I, Slots J.	J Periodontol	10.1902/jop.1998.69.7.828	1998
Enzymology	Use of the genomic subtractive hybridization technique to develop a real-time PCR assay for quantitative detection of Prevotella spp. in oral biofilm samples.	Nagashima S, Yoshida A, Suzuki N, Ansai T, Takehara T.	J Clin Microbiol	10.1128/jcm.43.6.2948-2951.2005	2005
	Methods of Topical Administration of Drugs and Biological Active Substances for Dental Implants-A Narrative Review.	Wychowanski P, Starzynska A, Adamska P, Slupecka-Ziemilska M, Sobocki BK, Chmielewska A, Wysocki B, Alterio D, Marvaso G, Jereczek-Fossa BA, Kowalski J.	Antibiotics (Basel)	10.3390/antibiotics10080919	2021
Phylogeny	"Checkerboard" assessments of periodontal microbiota and serum antibody responses: a case-control study.	Papapanou PN, Neiderud AM, Papadimitriou A, Sandros J, Dahlen G.	J Periodontol	10.1902/jop.2000.71.6.885	2000
Pathogenicity	Tetracycline-incorporated polymer nanofibers as a potential dental implant surface modifier.	Bottino MC, Munchow EA, Albuquerque MTP, Kamocki K, Shahi R, Gregory RL, Chu TG, Pankajakshan D.	J Biomed Mater Res B Appl Biomater	10.1002/jbm.b.33743	2017
Genetics	Correlation network analysis applied to complex biofilm communities.	Duran-Pinedo AE, Paster B, Teles R, Frias-Lopez J.	PLoS One	10.1371/journal.pone.0028438	2011
Pathogenicity	Modulation of antibacterial peptide activity by products of Porphyromonas gingivalis and Prevotella spp.	Devine DA, Marsh PD, Percival RS, Rangarajan M, Curtis MA.	Microbiology (Reading)	10.1099/13500872-145-4-965	1999
	Effects of photodynamic therapy with blue light and curcumin as mouth rinse for oral disinfection: a randomized controlled trial.	Leite DP, Paolillo FR, Parmesano TN, Fontana CR, Bagnato VS.	Photomed Laser Surg	10.1089/pho.2014.3805	2014
	Periodontal diseases as an emerging potential risk factor for adverse pregnancy outcomes: A review of concepts.	Bansal J, Bansal A, Kukreja N, Kukreja U.	J Turk Ger Gynecol Assoc	10.5152/jtgga.2011.40	2011
Enzymology	Characterisation of black-pigmented anaerobes isolated from diseased and healthy periodontal sites.	Teanpaisan R, Douglas CW, Walsh TF.	J Periodontal Res	10.1111/j.1600-0765.1995.tb02129.x	1995
Enzymology	Distribution and genetic analysis of oral Prevotella intermedia and Prevotella nigrescens.	Matto J, Saarela M, von Troil-Linden B, Kononen E, Jousimies-Somer H, Torkko H, Alaluusua S, Asikainen S.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00342.x	1996
	Reduced serum IgG reactivities with bacteria from dental plaque in HIV-infected persons with periodontitis.	Steinsvoll S, Myint M, Odden K, Berild D, Schenck K.	J Clin Periodontol	10.1111/j.1600-051x.1997.tb01196.x	1997
	Microbiota associated with chronic osteomyelitis of the jaws.	Gaetti-Jardim Junior E, Fardin AC, Gaetti-Jardim EC, de Castro AL, Schweitzer CM, Avila-Campos MJ.	Braz J Microbiol	10.1590/s1517-838220100004000025	2010
	Parvimonas micra can translocate from the subgingival sulcus of the human oral cavity to colorectal adenocarcinoma.	Conde-Perez K, Buetas E, Aja-Macaya P, Martin-De Arribas E, Iglesias-Corras I, Trigo-Tasende N, Nasser-Ali M, Estevez LS, Rumbo-Feal S, Otero-Alen B, Noguera JF, Concha A, Pardinas-Lopez S, Carda-Dieguez M, Gomez-Randulfe I, Martinez-Lago N, Ladra S, Aparicio LA, Bou G, Mira A, Vallejo JA, Poza M.	Mol Oncol	10.1002/1878-0261.13506	2024
	Supernatant cytotoxicity and proteolytic activity of selected oral bacteria against human gingival fibroblasts in vitro.	Letzelter C, Croute F, Pianezzi B, Roques C, Soleilhavoup JP.	Arch Oral Biol	10.1016/s0003-9969(97)00095-2	1998
Phylogeny	Genomics of periodontal disease and tooth morbidity.	Morelli T, Agler CS, Divaris K.	Periodontol 2000	10.1111/prd.12320	2020
Enzymology	beta-lactamase production by oral pigmented Prevotella species isolated from young children.	Kononen E, Nyfors S, Matto J, Asikainen S, Jousimies-Somer H.	Clin Infect Dis	10.1086/516208	1997
	Assessing the Effect of Smokeless Tobacco Consumption on Oral Microbiome in Healthy and Oral Cancer Patients.	Saxena R, Prasoodanan P K V, Gupta SV, Gupta S, Waiker P, Samaiya A, Sharma AK, Sharma VK.	Front Cell Infect Microbiol	10.3389/fcimb.2022.841465	2022
	Salivary IgA responses to bacteria in dental plaque as related to periodontal and HIV infection status.	Myint MM, Steinsvoll S, Odden K, Dobloug J, Schenck K.	Eur J Oral Sci	10.1111/j.1600-0722.1997.tb00218.x	1997
Enzymology	Periodontitis patient and the spouse: periodontal bacteria before and after treatment.	von Troil-Linden B, Alaluusua S, Wolf J, Jousimies-Somer H, Torppa J, Asikainen S.	J Clin Periodontol	10.1111/j.1600-051x.1997.tb01208.x	1997
Enzymology	Risk indicators for harboring periodontal pathogens.	Umeda M, Chen C, Bakker I, Contreras A, Morrison JL, Slots J.	J Periodontol	10.1902/jop.1998.69.10.1111	1998
Enzymology	Oral food consumption and subgingival microorganisms: subgingival microbiota of gastrostomy tube-fed children and healthy controls.	Chen C, Ashimoto A, Sangsurasak S, Flynn MJ, Slots J.	J Periodontol	10.1902/jop.1997.68.12.1163	1997
Phylogeny	Evaluation of periodontal pathogens of the mandibular third molar pericoronitis by using real time PCR.	Sencimen M, Saygun I, Gulses A, Bal V, Acikel CH, Kubar A.	Int Dent J	10.1111/idj.12109	2014
Pathogenicity	Vascular Changes and Hypoxia in Periodontal Disease as a Link to Systemic Complications.	Celik D, Kantarci A.	Pathogens	10.3390/pathogens10101280	2021
	Association between periodontal disease due to Campylobacter rectus and cerebral microbleeds in acute stroke patients.	Shiga Y, Hosomi N, Nezu T, Nishi H, Aoki S, Nakamori M, Ishikawa K, Kinoshita N, Imamura E, Ueno H, Shintani T, Ohge H, Kawaguchi H, Kurihara H, Wakabayashi S, Maruyama H.	PLoS One	10.1371/journal.pone.0239773	2020
	Relationship between herpesviruses and adult periodontitis and periodontopathic bacteria.	Contreras A, Umeda M, Chen C, Bakker I, Morrison JL, Slots J.	J Periodontol	10.1902/jop.1999.70.5.478	1999
	The microbial changes in subgingival plaques of orthodontic patients: a systematic review and meta-analysis of clinical trials.	Guo R, Lin Y, Zheng Y, Li W.	BMC Oral Health	10.1186/s12903-017-0378-1	2017
	Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients.	Zeybel M, Altay O, Arif M, Li X, Yang H, Fredolini C, Akyildiz M, Saglam B, Gonenli MG, Ural D, Kim W, Schwenk JM, Zhang C, Shoaie S, Nielsen J, Uhlen M, Boren J, Mardinoglu A.	Mol Syst Biol	10.15252/msb.202110459	2021
	Cetylpyridinium chloride mouth rinses alleviate experimental gingivitis by inhibiting dental plaque maturation.	Teng F, He T, Huang S, Bo CP, Li Z, Chang JL, Liu JQ, Charbonneau D, Xu J, Li R, Ling JQ.	Int J Oral Sci	10.1038/ijos.2016.18	2016
Phylogeny	"Checkerboard" versus culture: a comparison between two methods for identification of subgingival microbiota.	Papapanou PN, Madianos PN, Dahlen G, Sandros J.	Eur J Oral Sci	10.1111/j.1600-0722.1997.tb02135.x	1997
Transcriptome	Worlds Apart - Transcriptome Profiles of Key Oral Microbes in the Periodontal Pocket Compared to Single Laboratory Culture Reflect Synergistic Interactions.	Deng ZL, Sztajer H, Jarek M, Bhuju S, Wagner-Dobler I.	Front Microbiol	10.3389/fmicb.2018.00124	2018
	Periodontal Health and Oral Microbiota in Patients with Rheumatoid Arthritis.	Eriksson K, Fei G, Lundmark A, Benchimol D, Lee L, Hu YOO, Kats A, Saevarsdottir S, Catrina AI, Klinge B, Andersson AF, Klareskog L, Lundberg K, Jansson L, Yucel-Lindberg T.	J Clin Med	10.3390/jcm8050630	2019
	Periodontitis is associated with significant hepatic fibrosis in patients with non-alcoholic fatty liver disease.	Alazawi W, Bernabe E, Tai D, Janicki T, Kemos P, Samsuddin S, Syn WK, Gillam D, Turner W.	PLoS One	10.1371/journal.pone.0185902	2017
	Association between Herpesviruses and Chronic Periodontitis: A Meta-Analysis Based on Case-Control Studies.	Zhu C, Li F, Wong MC, Feng XP, Lu HX, Xu W.	PLoS One	10.1371/journal.pone.0144319	2015
Transcriptome	Relationship between oral anaerobic bacteria and otitis media with effusion.	Topcuoglu N, Keskin F, Ciftci S, Paltura C, Kulekci M, Ustek D, Kulekci G.	Int J Med Sci	10.7150/ijms.4382	2012
Enzymology	Grading system for periodontitis by analyzing levels of periodontal pathogens in saliva.	Kim EH, Joo JY, Lee YJ, Koh JK, Choi JH, Shin Y, Cho J, Park E, Kang J, Lee K, Bhak J, Kim BC, Lee JY.	PLoS One	10.1371/journal.pone.0200900	2018
Phylogeny	Microbiota of successful osseointegrated dental implants.	Lee KH, Maiden MF, Tanner AC, Weber HP.	J Periodontol	10.1902/jop.1999.70.2.131	1999
Metabolism	Degradation of lactoferrin by periodontitis-associated bacteria.	Alugupalli KR, Kalfas S.	FEMS Microbiol Lett	10.1111/j.1574-6968.1996.tb08579.x	1996
Phylogeny	PCR reaction and dot-blot hybridization to monitor the distribution of oral pathogens within plaque samples of periodontally healthy individuals.	Conrads G, Mutters R, Fischer J, Brauner A, Lutticken R, Lampert F.	J Periodontol	10.1902/jop.1996.67.10.994	1996
Metabolism	Collagen-binding activity of Prevotella intermedia measured by a microtitre plate adherence assay.	Grenier D.	Microbiology (Reading)	10.1099/13500872-142-6-1537	1996
Metabolism	Spontaneous periodontitis development in diabetic rats involves an unrestricted expression of inflammatory cytokines and tissue destructive factors in the absence of major changes in commensal oral microbiota.	Claudino M, Gennaro G, Cestari TM, Spadella CT, Garlet GP, Assis GF.	Exp Diabetes Res	10.1155/2012/356841	2012
Enzymology	Electrophoresis of whole-cell soluble proteins of microorganisms isolated from bacteremias in endodontic therapy.	Debelian GJ, Olsen I, Tronstad L.	Eur J Oral Sci	10.1111/j.1600-0722.1996.tb00139.x	1996
Enzymology	Identification of a chromosomally encoded kanamycin acetylase in Porphyromonas gingivalis.	Kato T, Hirai K, Okuda K.	FEMS Microbiol Lett	10.1111/j.1574-6968.1995.tb07791.x	1995
	Characterization of the Protective Role of Regulatory T Cells in Experimental Periapical Lesion Development and Their Chemoattraction Manipulation as a Therapeutic Tool.	Francisconi CF, Vieira AE, Biguetti CC, Glowacki AJ, Trombone AP, Letra A, Menezes Silva R, Sfeir CS, Little SR, Garlet GP.	J Endod	10.1016/j.joen.2015.09.022	2016
	Relationship between invasion of the periodontium by periodontal pathogens and periodontal disease: a systematic review.	Mendes L, Azevedo NF, Felino A, Pinto MG.	Virulence	10.4161/21505594.2014.984566	2015
	Microbial role in periodontitis: Have we reached the top? Some unsung bacteria other than red complex.	Arora N, Mishra A, Chugh S.	J Indian Soc Periodontol	10.4103/0972-124x.128192	2014
	Microbial complexes in subgingival plaque.	Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL.	J Clin Periodontol	10.1111/j.1600-051x.1998.tb02419.x	1998
	Propolis, A Hope for the Future in Treating Resistant Periodontal Pathogens.	Shabbir A, Rashid M, Tipu HN.	Cureus	10.7759/cureus.682	2016
Enzymology	Characterization of Prevotella intermedia and Prevotella nigrescens isolates from periodontic and endodontic infections.	Gharbia SE, Haapasalo M, Shah HN, Kotiranta A, Lounatmaa K, Pearce MA, Devine DA.	J Periodontol	10.1902/jop.1994.65.1.56	1994
Metabolism	Lipopolysaccharide increases cell surface-associated fibronectin in fibroblasts in vitro.	Kubo K, Kamada T, Okamoto H, Izumi Y, Otsuji S, Sueda T.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00333.x	1996
Metabolism	Analysis of pH-driven disruption of oral microbial communities in vitro.	Bradshaw DJ, Marsh PD.	Caries Res	10.1159/000016487	1998
	Nitrate as a potential prebiotic for the oral microbiome.	Rosier BT, Buetas E, Moya-Gonzalvez EM, Artacho A, Mira A.	Sci Rep	10.1038/s41598-020-69931-x	2020
Metabolism	Green Tea Modulates Cytokine Expression in the Periodontium and Attenuates Alveolar Bone Resorption in Type 1 Diabetic Rats.	Gennaro G, Claudino M, Cestari TM, Ceolin D, Germino P, Garlet GP, de Assis GF.	PLoS One	10.1371/journal.pone.0134784	2015
	Combination of Zinc Hyaluronate and Metronidazole in a Lipid-Based Drug Delivery System for the Treatment of Periodontitis.	Leber A, Budai-Szucs M, Urban E, Valyi P, Gacsi A, Berko S, Kovacs A, Csanyi E.	Pharmaceutics	10.3390/pharmaceutics11030142	2019
	Temporal development of the oral microbiome and prediction of early childhood caries.	Dashper SG, Mitchell HL, Le Cao KA, Carpenter L, Gussy MG, Calache H, Gladman SL, Bulach DM, Hoffmann B, Catmull DV, Pruilh S, Johnson S, Gibbs L, Amezdroz E, Bhatnagar U, Seemann T, Mnatzaganian G, Manton DJ, Reynolds EC.	Sci Rep	10.1038/s41598-019-56233-0	2019
	Orthodontic bracket designs and their impact on microbial profile and periodontal disease: A clinical trial.	Moolya NN, Shetty A, Gupta N, Gupta A, Jalan V, Sharma R.	J Orthod Sci	10.4103/2278-0203.143233	2014
Metabolism	Heat shock proteins in the human periodontal disease process.	Ando T, Kato T, Ishihara K, Ogiuchi H, Okuda K.	Microbiol Immunol	10.1111/j.1348-0421.1995.tb02208.x	1995
Pathogenicity	Susceptibilities of Eikenella corrodens, Prevotella intermedia, and Prevotella nigrescens clinical isolates to amoxicillin and tetracycline.	Luong N, Tsai J, Chen C.	Antimicrob Agents Chemother	10.1128/aac.45.11.3253-3255.2001	2001
	RANKL Triggers Treg-Mediated Immunoregulation in Inflammatory Osteolysis.	Francisconi CF, Vieira AE, Azevedo MCS, Tabanez AP, Fonseca AC, Trombone APF, Letra A, Silva RM, Sfeir CS, Little SR, Garlet GP.	J Dent Res	10.1177/0022034518759302	2018
Pathogenicity	Host-Microbial Interactions in Systemic Lupus Erythematosus and Periodontitis.	Pessoa L, Aleti G, Choudhury S, Nguyen D, Yaskell T, Zhang Y, Li W, Nelson KE, Neto LLS, Sant'Ana ACP, Freire M.	Front Immunol	10.3389/fimmu.2019.02602	2019
	Tetracycline resistance in Prevotella isolates from periodontally diseased patients is due to the tet(Q) gene.	Olsvik B, Flynn MJ, Tenover FC, Slots J, Olsen I.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00186.x	1996
	Planktonic Growth of Pseudomonas aeruginosa around a Dual-Species Biofilm Supports the Growth of Fusobacterium nucleatum within That Biofilm.	Wang JC, Cordero J, Sun Y, Aranke M, Wolcott R, Colmer-Hamood JA, Hamood AN.	Int J Otolaryngol	10.1155/2017/3037191	2017
Enzymology	Proteolytic artifacts in SDS-PAGE analysis of selected periodontal pathogens.	Weidner MF, Grenier D, Mayrand D.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00343.x	1996
Metabolism	Degradation of host protease inhibitors and activation of plasminogen by proteolytic enzymes from Porphyromonas gingivalis and Treponema denticola.	Grenier D.	Microbiology (Reading)	10.1099/00221287-142-4-955	1996
	The Complex Molecular Picture of Gut and Oral Microbiota-Brain-Depression System: What We Know and What We Need to Know.	Scassellati C, Marizzoni M, Cattane N, Lopizzo N, Mombelli E, Riva MA, Cattaneo A.	Front Psychiatry	10.3389/fpsyt.2021.722335	2021
	Extracts of periodontopathic microorganisms lack functional superantigenic activity for murine T cells.	Petit MD, Stashenko P.	J Periodontal Res	10.1111/j.1600-0765.1996.tb00515.x	1996
Genetics	Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome.	Jiang B, Liang X, Chen Y, Ma T, Liu L, Li J, Jiang R, Chen T, Zhang X, Li S.	Sci Rep	10.1038/srep00936	2012
	Microbiomes of Endodontic-Periodontal Lesions before and after Chemomechanical Preparation.	Gomes BP, Berber VB, Kokaras AS, Chen T, Paster BJ.	J Endod	10.1016/j.joen.2015.08.022	2015
	Clinical, microbiological and immunological profile of healthy, gingivitis and putative active periodontal subjects.	Tanner A, Kent R, Maiden MF, Taubman MA.	J Periodontal Res	10.1111/j.1600-0765.1996.tb00484.x	1996
	Clinical and microbiological features of refractory periodontitis subjects.	Colombo AP, Haffajee AD, Dewhirst FE, Paster BJ, Smith CM, Cugini MA, Socransky SS.	J Clin Periodontol	10.1111/j.1600-051x.1998.tb02424.x	1998
	Source of suspected periodontal pathogens re-emerging after periodontal treatment.	von Troil-Linden B, Saarela M, Matto J, Alaluusua S, Jousimies-Somer H, Asikainen S.	J Clin Periodontol	10.1111/j.1600-051x.1996.tb01831.x	1996
Enzymology	Protein degradation by Prevotella intermedia and Actinomyces meyeri supports the growth of non-protein-cleaving oral bacteria in serum.	Jansen HJ, van der Hoeven JS.	J Clin Periodontol	10.1111/j.1600-051x.1997.tb00768.x	1997
Phylogeny	Exploring the microbiome of healthy and diseased peri-implant sites using Illumina sequencing.	Sanz-Martin I, Doolittle-Hall J, Teles RP, Patel M, Belibasakis GN, Hammerle CHF, Jung RE, Teles FRF.	J Clin Periodontol	10.1111/jcpe.12788	2017
Phylogeny	The Subgingival Microbiome of Periodontal Pockets With Different Probing Depths in Chronic and Aggressive Periodontitis: A Pilot Study.	Shi M, Wei Y, Hu W, Nie Y, Wu X, Lu R.	Front Cell Infect Microbiol	10.3389/fcimb.2018.00124	2018
Enzymology	A longitudinal study from prepuberty to puberty of gingivitis. Correlation between the occurrence of Prevotella intermedia and sex hormones.	Nakagawa S, Fujii H, Machida Y, Okuda K.	J Clin Periodontol	10.1111/j.1600-051x.1994.tb00783.x	1994
	The tet(Q) gene in bacteria isolated from patients with refractory periodontal disease.	Olsvik B, Olsen I, Tenover FC.	Oral Microbiol Immunol	10.1111/j.1399-302x.1994.tb00067.x	1994
Pathogenicity	Antimicrobial susceptibilities of Porphyromonas gingivalis, Prevotella intermedia, and Prevotella nigrescens spp. isolated in Spain.	Andres MT, Chung WO, Roberts MC, Fierro JF.	Antimicrob Agents Chemother	10.1128/aac.42.11.3022	1998
Enzymology	Analytical performance of an immunologic-based periodontal bacterial test for simultaneous detection and differentiation of Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, and Prevotella intermedia.	Snyder B, Ryerson CC, Corona H, Grogan EA, Reynolds HS, Contestable PB, Boyer BP, Mayer J, Mangan T, Norkus N, Zambon JJ, Genco RJ.	J Periodontol	10.1902/jop.1996.67.5.497	1996
	Effect of initial therapy on dynamics of immunogloblin G levels to some periodontopathic bacteria in serum and gingival crevicular fluid.	Hosaka Y, Saito A, Nakagawa T, Seida K, Yamada S, Okuda K.	Bull Tokyo Dent Coll		1994
	Effect of oxygen, inoculum composition and flow rate on development of mixed-culture oral biofilms.	Bradshaw DJ, Marsh PD, Allison C, Schilling KM.	Microbiology (Reading)	10.1099/13500872-142-3-623	1996
	Composition and diversity of the subgingival microbiome and its relationship with age in postmenopausal women: an epidemiologic investigation.	LaMonte MJ, Genco RJ, Buck MJ, McSkimming DI, Li L, Hovey KM, Andrews CA, Zheng W, Sun Y, Millen AE, Tsompana M, Banack HR, Wactawski-Wende J.	BMC Oral Health	10.1186/s12903-019-0906-2	2019
Enzymology	Polymerase chain reaction detection of 8 putative periodontal pathogens in subgingival plaque of gingivitis and advanced periodontitis lesions.	Ashimoto A, Chen C, Bakker I, Slots J.	Oral Microbiol Immunol	10.1111/j.1399-302x.1996.tb00180.x	1996
	Deficiency of BrpA in Streptococcus mutans reduces virulence in rat caries model.	Wen ZT, Scott-Anne K, Liao S, De A, Luo M, Kovacs C, Narvaez BS, Faustoferri RC, Yu Q, Taylor CM, Quivey RG.	Mol Oral Microbiol	10.1111/omi.12230	2018
	Isolation of bacterial extrachromosomal DNA from human dental plaque associated with periodontal disease, using transposon-aided capture (TRACA).	Warburton PJ, Allan E, Hunter S, Ward J, Booth V, Wade WG, Mullany P.	FEMS Microbiol Ecol	10.1111/j.1574-6941.2011.01166.x	2011
Enzymology	Microbial Diversity of Source and Point-of-Use Water in Rural Haiti - A Pyrosequencing-Based Metagenomic Survey.	Mukherjee N, Bartelli D, Patra C, Chauhan BV, Dowd SE, Banerjee P.	PLoS One	10.1371/journal.pone.0167353	2016
	Analysis of oral bacterial communities: comparison of HOMINGS with a tree-based approach implemented in QIIME.	Palmer RJ, Cotton SL, Kokaras AS, Gardner P, Grisius M, Pelayo E, Warner B, Paster BJ, Alevizos I.	J Oral Microbiol	10.1080/20002297.2019.1586413	2019
	Association Between Serum Antibodies to Periodontal Bacteria and Rheumatoid Factor in the Third National Health and Nutrition Examination Survey.	Goh CE, Kopp J, Papapanou PN, Molitor JA, Demmer RT.	Arthritis Rheumatol	10.1002/art.39724	2016
	Characterization of inositol lipid metabolism in gut-associated Bacteroidetes.	Heaver SL, Le HH, Tang P, Basle A, Mirretta Barone C, Vu DL, Waters JL, Marles-Wright J, Johnson EL, Campopiano DJ, Ley RE.	Nat Microbiol	10.1038/s41564-022-01152-6	2022
	Management of peri-implantitis: a systematic review, 2010-2015.	Mahato N, Wu X, Wang L.	Springerplus	10.1186/s40064-016-1735-2	2016
Pathogenicity	Effect of Helicobacter pylori infection on chronic periodontitis by the change of microecology and inflammation.	Hu Z, Zhang Y, Li Z, Yu Y, Kang W, Han Y, Geng X, Ge S, Sun Y.	Oncotarget	10.18632/oncotarget.11449	2016
Pathogenicity	Reduced Glutathione Mediates Resistance to H2S Toxicity in Oral Streptococci.	Ooi XJ, Tan KS.	Appl Environ Microbiol	10.1128/aem.03946-15	2016
	Bio-Inspired Systems in Nonsurgical Periodontal Therapy to Reduce Contaminated Aerosol during COVID-19: A Comprehensive and Bibliometric Review.	Butera A, Maiorani C, Natoli V, Bruni A, Coscione C, Magliano G, Giacobbo G, Morelli A, Moressa S, Scribante A.	J Clin Med	10.3390/jcm9123914	2020
	Effect of therapy on periodontal infections.	Socransky SS, Haffajee AD.	J Periodontol	10.1902/jop.1993.64.8s.754	1993
Metabolism	Common Polymorphisms in IFI16 and AIM2 Genes Are Associated With Periodontal Disease.	Marchesan JT, Jiao Y, Moss K, Divaris K, Seaman W, Webster-Cyriaque J, Zhang S, Yu N, Song C, Bencharit S, Teles R, Offenbacher S.	J Periodontol	10.1902/jop.2017.160553	2017
	Illumina MiSeq Sequencing for Preliminary Analysis of Microbiome Causing Primary Endodontic Infections in Egypt.	Tawfik SA, Azab MM, Ahmed AAA, Fayyad DM.	Int J Microbiol	10.1155/2018/2837328	2018
Metabolism	Periodontitis increases rheumatic factor serum levels and citrullinated proteins in gingival tissues and alter cytokine balance in arthritic rats.	Correa MG, Sacchetti SB, Ribeiro FV, Pimentel SP, Casarin RC, Cirano FR, Casati MZ.	PLoS One	10.1371/journal.pone.0174442	2017
Enzymology	Periodontopathogen profile of healthy and oral lichen planus patients with gingivitis or periodontitis.	Ertugrul AS, Arslan U, Dursun R, Hakki SS.	Int J Oral Sci	10.1038/ijos.2013.30	2013
	Comparison between scaling-root-planing (SRP) and SRP/photodynamic therapy: six-month study.	Berakdar M, Callaway A, Eddin MF, Ross A, Willershausen B.	Head Face Med	10.1186/1746-160x-8-12	2012
	Acquisition and maturation of oral microbiome throughout childhood: An update.	Sampaio-Maia B, Monteiro-Silva F.	Dent Res J (Isfahan)		2014
Pathogenicity	Use of ethanol extracts of Terminalia chebula to prevent periodontal disease induced by dental plaque bacteria.	Lee J, Nho YH, Yun SK, Hwang YS.	BMC Complement Altern Med	10.1186/s12906-017-1619-1	2017
	Beneficial Properties of Probiotics.	Shi LH, Balakrishnan K, Thiagarajah K, Mohd Ismail NI, Yin OS.	Trop Life Sci Res	10.21315/tlsr2016.27.2.6	2016
	Detection of periodontal markers in chronic periodontitis.	Leonhardt A, Carlen A, Bengtsson L, Dahlen G.	Open Dent J	10.2174/1874210601105010110	2011
	The Microbiome in Populations with a Low and High Prevalence of Caries.	Johansson I, Witkowska E, Kaveh B, Lif Holgerson P, Tanner AC.	J Dent Res	10.1177/0022034515609554	2016
	Dental plaque microbial profiles of children from Khartoum, Sudan, with congenital heart defects.	Mohamed Ali H, Berggreen E, Nguyen D, Wahab Ali R, Van Dyke TE, Hasturk H, Mustafa M.	J Oral Microbiol	10.1080/20002297.2017.1281556	2017
Enzymology	Cellular locations of proteinases and association with vesicles in Porphyromonas gingivalis.	Oishi S, Miyashita M, Kiso A, Kikuchi Y, Ueda O, Hirai K, Shibata Y, Fujimura S.	Eur J Med Res	10.1186/2047-783x-15-9-397	2010
Enzymology	The lung microbiota in early rheumatoid arthritis and autoimmunity.	Scher JU, Joshua V, Artacho A, Abdollahi-Roodsaz S, Ockinger J, Kullberg S, Skold M, Eklund A, Grunewald J, Clemente JC, Ubeda C, Segal LN, Catrina AI.	Microbiome	10.1186/s40168-016-0206-x	2016
	Profiling of Oral Microbiota in Early Childhood Caries Using Single-Molecule Real-Time Sequencing.	Wang Y, Zhang J, Chen X, Jiang W, Wang S, Xu L, Tu Y, Zheng P, Wang Y, Lin X, Chen H.	Front Microbiol	10.3389/fmicb.2017.02244	2017
	Emerging Contact-Killing Antibacterial Strategies for Developing Anti-Biofilm Dental Polymeric Restorative Materials.	Mitwalli H, Alsahafi R, Balhaddad AA, Weir MD, Xu HHK, Melo MAS.	Bioengineering (Basel)	10.3390/bioengineering7030083	2020
Phylogeny	Factors affecting human supragingival biofilm composition. II. Tooth position.	Haffajee AD, Teles RP, Patel MR, Song X, Yaskell T, Socransky SS.	J Periodontal Res	10.1111/j.1600-0765.2008.01155.x	2009
	Saliva microbiome, dietary, and genetic markers are associated with suicidal ideation in university students.	Ahrens AP, Sanchez-Padilla DE, Drew JC, Oli MW, Roesch LFW, Triplett EW.	Sci Rep	10.1038/s41598-022-18020-2	2022
	Oral microbiome of deep and shallow dental pockets in chronic periodontitis.	Ge X, Rodriguez R, Trinh M, Gunsolley J, Xu P.	PLoS One	10.1371/journal.pone.0065520	2013
	Unique subgingival microbiota associated with periodontitis in cirrhosis patients.	Jensen A, Ladegaard Gronkjaer L, Holmstrup P, Vilstrup H, Kilian M.	Sci Rep	10.1038/s41598-018-28905-w	2018
	Interplay Among the Oral Microbiome, Oral Cavity Conditions, the Host Immune Response, Diabetes Mellitus, and Its Associated-Risk Factors-An Overview.	Negrini TC, Carlos IZ, Duque C, Caiaffa KS, Arthur RA.	Front Oral Health	10.3389/froh.2021.697428	2021
	Saliva and tooth biofilm bacterial microbiota in adolescents in a low caries community.	Eriksson L, Lif Holgerson P, Johansson I.	Sci Rep	10.1038/s41598-017-06221-z	2017
Phylogeny	Evaluation of the Vitek 2 ANC card for identification of clinical isolates of anaerobic bacteria.	Lee EH, Degener JE, Welling GW, Veloo AC.	J Clin Microbiol	10.1128/jcm.02166-10	2011
Enzymology	Incidence of Prevotella intermedia and Prevotella nigrescens carriage among family members with subclinical periodontal disease.	Fukui K, Kato N, Kato H, Watanabe K, Tatematsu N.	J Clin Microbiol	10.1128/jcm.37.10.3141-3145.1999	1999
	An update on the management of endodontic biofilms using root canal irrigants and medicaments.	Mohammadi Z, Soltani MK, Shalavi S.	Iran Endod J		2014
Pathogenicity	Effects of a chlorhexidine gluconate-containing mouthwash on the vitality and antimicrobial susceptibility of in vitro oral bacterial ecosystems.	McBain AJ, Bartolo RG, Catrenich CE, Charbonneau D, Ledder RG, Gilbert P.	Appl Environ Microbiol	10.1128/aem.69.8.4770-4776.2003	2003
Metabolism	Determination of porphyrins in oral bacteria by liquid chromatography electrospray ionization tandem mass spectrometry.	Fyrestam J, Bjurshammar N, Paulsson E, Johannsen A, Ostman C.	Anal Bioanal Chem	10.1007/s00216-015-8864-2	2015
Metabolism	Salivary inflammatory markers and microbiome in normoglycemic lean and obese children compared to obese children with type 2 diabetes.	Janem WF, Scannapieco FA, Sabharwal A, Tsompana M, Berman HA, Haase EM, Miecznikowski JC, Mastrandrea LD.	PLoS One	10.1371/journal.pone.0172647	2017
Phylogeny	Distinct interacting core taxa in co-occurrence networks enable discrimination of polymicrobial oral diseases with similar symptoms.	Shiba T, Watanabe T, Kachi H, Koyanagi T, Maruyama N, Murase K, Takeuchi Y, Maruyama F, Izumi Y, Nakagawa I.	Sci Rep	10.1038/srep30997	2016
	Assessing the progression of chronic periodontitis using subgingival pathogen levels: a 24-month prospective multicenter cohort study.	Kakuta E, Nomura Y, Morozumi T, Nakagawa T, Nakamura T, Noguchi K, Yoshimura A, Hara Y, Fujise O, Nishimura F, Kono T, Umeda M, Fukuda M, Noguchi T, Yoshinari N, Fukaya C, Sekino S, Numabe Y, Sugano N, Ito K, Kobayashi H, Izumi Y, Takai H, Ogata Y, Takano S, Minabe M, Makino-Oi A, Saito A, Abe Y, Sato S, Suzuki F, Takahashi K, Sugaya T, Kawanami M, Hanada N, Takashiba S, Yoshie H.	BMC Oral Health	10.1186/s12903-017-0337-x	2017
Pathogenicity	In Vitro Effects of Polyphosphate against Prevotella intermedia in Planktonic Phase and Biofilm.	Jang EY, Kim M, Noh MH, Moon JH, Lee JY.	Antimicrob Agents Chemother	10.1128/aac.01861-15	2016
	Pregnancy-induced gingivitis and OMICS in dentistry: in silico modeling and in vivo prospective validation of estradiol-modulated inflammatory biomarkers.	Gursoy M, Zeidan-Chulia F, Kononen E, Moreira JC, Liukkonen J, Sorsa T, Gursoy UK.	OMICS	10.1089/omi.2014.0020	2014
	Developing a New Generation of Therapeutic Dental Polymers to Inhibit Oral Biofilms and Protect Teeth.	Zhang K, Baras B, Lynch CD, Weir MD, Melo MAS, Li Y, Reynolds MA, Bai Y, Wang L, Wang S, Xu HHK.	Materials (Basel)	10.3390/ma11091747	2018
	Management of peri-implantitis.	Prathapachandran J, Suresh N.	Dent Res J (Isfahan)	10.4103/1735-3327.104867	2012
	The Role of Oral Pathobionts in Dysbiosis during Periodontitis Development.	Jiao Y, Hasegawa M, Inohara N.	J Dent Res	10.1177/0022034514528212	2014
Enzymology	Effect of periodontal therapy on the subgingival microbiota over a 2-year monitoring period. I. Overall effect and kinetics of change.	Socransky SS, Haffajee AD, Teles R, Wennstrom JL, Lindhe J, Bogren A, Hasturk H, van Dyke T, Wang X, Goodson JM.	J Clin Periodontol	10.1111/jcpe.12117	2013
	The Evaluation of the Effects of Two Probiotic Strains on the Oral Ecosystem: A Randomized Clinical Trial.	Volgenant CMC, van der Waal SV, Brandt BW, Buijs MJ, van der Veen MH, Rosema NAM, Fiebich BL, Rose T, Schmitter T, Gajfulin M, Crielaard W, Zaura E.	Front Oral Health	10.3389/froh.2022.825017	2022
Pathogenicity	Oxidative Stress and IgG Antibody Modify Periodontitis-CRP Association.	Singer RE, Moss K, Kim SJ, Beck JD, Offenbacher S.	J Dent Res	10.1177/0022034515602693	2015
	The association of active and secondhand smoking with oral health in adults: Japan public health center-based study.	Ueno M, Ohara S, Sawada N, Inoue M, Tsugane S, Kawaguchi Y.	Tob Induc Dis	10.1186/s12971-015-0047-6	2015
Metabolism	Identification of Dipeptidyl-Peptidase (DPP)5 and DPP7 in Porphyromonas endodontalis, Distinct from Those in Porphyromonas gingivalis.	Nishimata H, Ohara-Nemoto Y, Baba TT, Hoshino T, Fujiwara T, Shimoyama Y, Kimura S, Nemoto TK.	PLoS One	10.1371/journal.pone.0114221	2014
Pathogenicity	Pimaradienoic Acid Inhibits Carrageenan-Induced Inflammatory Leukocyte Recruitment and Edema in Mice: Inhibition of Oxidative Stress, Nitric Oxide and Cytokine Production.	Mizokami SS, Hohmann MS, Staurengo-Ferrari L, Carvalho TT, Zarpelon AC, Possebon MI, de Souza AR, Veneziani RC, Arakawa NS, Casagrande R, Verri WA.	PLoS One	10.1371/journal.pone.0149656	2016
Phylogeny	Microbiota in the Throat and Risk Factors for Laryngeal Carcinoma.	Gong H, Shi Y, Zhou X, Wu C, Cao P, Xu C, Hou D, Wang Y, Zhou L.	Appl Environ Microbiol	10.1128/aem.02329-14	2014
Enzymology	High incidence of Aggregatibacter actinomycetemcomitans infection in patients with cerebral infarction and diabetic renal failure: a cross-sectional study.	Murakami M, Suzuki J, Yamazaki S, Ikezoe M, Matsushima R, Ashigaki N, Aoyama N, Kobayashi N, Wakayama K, Akazawa H, Komuro I, Izumi Y, Isobe M.	BMC Infect Dis	10.1186/1471-2334-13-557	2013
	Impact of Adjunctive Diode Laser Application to Non-Surgical Periodontal Therapy on Clinical, Microbiological and Immunological Outcomes in Management of Chronic Periodontitis: A Systematic Review of Human Randomized Controlled Clinical Trials.	Pawelczyk-Madalinska M, Benedicenti S, Salagean T, Bordea IR, Hanna R.	J Inflamm Res	10.2147/jir.s304946	2021
Metabolism	A family of anti-Bacteroidales peptide toxins wide-spread in the human gut microbiota.	Coyne MJ, Bechon N, Matano LM, McEneany VL, Chatzidaki-Livanis M, Comstock LE.	Nat Commun	10.1038/s41467-019-11494-1	2019
	Site-specific treatment outcome in smokers following non-surgical and surgical periodontal therapy.	Bunaes DF, Lie SA, Enersen M, Aastrom AN, Mustafa K, Leknes KN.	J Clin Periodontol	10.1111/jcpe.12462	2015
Metabolism	Cleavage of IgG1 in gingival crevicular fluid is associated with the presence of Porphyromonas gingivalis.	Guentsch A, Hirsch C, Pfister W, Vincents B, Abrahamson M, Sroka A, Potempa J, Eick S.	J Periodontal Res	10.1111/jre.12027	2013
	Oral Dysbiosis and Autoimmunity: From Local Periodontal Responses to an Imbalanced Systemic Immunity. A Review.	Suarez LJ, Garzon H, Arboleda S, Rodriguez A.	Front Immunol	10.3389/fimmu.2020.591255	2020
Metabolism	Role of the cysteine protease interpain A of Prevotella intermedia in breakdown and release of haem from haemoglobin.	Byrne DP, Wawrzonek K, Jaworska A, Birss AJ, Potempa J, Smalley JW.	Biochem J	10.1042/bj20090343	2009
Genetics	Microbial community profiling of human saliva using shotgun metagenomic sequencing.	Hasan NA, Young BA, Minard-Smith AT, Saeed K, Li H, Heizer EM, McMillan NJ, Isom R, Abdullah AS, Bornman DM, Faith SA, Choi SY, Dickens ML, Cebula TA, Colwell RR.	PLoS One	10.1371/journal.pone.0097699	2014
Pathogenicity	The effects of inhaled aztreonam on the cystic fibrosis lung microbiome.	Heirali AA, Workentine ML, Acosta N, Poonja A, Storey DG, Somayaji R, Rabin HR, Whelan FJ, Surette MG, Parkins MD.	Microbiome	10.1186/s40168-017-0265-7	2017
Pathogenicity	Innate Sensing of the Gut Microbiota: Modulation of Inflammatory and Autoimmune Diseases.	Ignacio A, Morales CI, Camara NO, Almeida RR.	Front Immunol	10.3389/fimmu.2016.00054	2016
	Nanoparticles as Anti-Microbial, Anti-Inflammatory, and Remineralizing Agents in Oral Care Cosmetics: A Review of the Current Situation.	Carrouel F, Viennot S, Ottolenghi L, Gaillard C, Bourgeois D.	Nanomaterials (Basel)	10.3390/nano10010140	2020
	The recent advances in scaffolds for integrated periodontal regeneration.	Woo HN, Cho YJ, Tarafder S, Lee CH.	Bioact Mater	10.1016/j.bioactmat.2021.03.012	2021
	Dysbiosis and alterations in predicted functions of the subgingival microbiome in chronic periodontitis.	Kirst ME, Li EC, Alfant B, Chi YY, Walker C, Magnusson I, Wang GP.	Appl Environ Microbiol	10.1128/aem.02712-14	2015
Phylogeny	Use of multiple-displacement amplification and checkerboard DNA-DNA hybridization to examine the microbiota of endodontic infections.	Brito LC, Teles FR, Teles RP, Franca EC, Ribeiro-Sobrinho AP, Haffajee AD, Socransky SS.	J Clin Microbiol	10.1128/jcm.02618-06	2007
	Antiperiodontitis Effects of Siegesbeckia glabrescens In Vitro.	Bellere AD, Yu D, Oh S, Kim M, Jung J, Fang M, Zheng S, Yi TH.	Antioxidants (Basel)	10.3390/antiox12020471	2023
	Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria.	Satokata AAC, Souza JH, Silva LLO, Santiago MB, Ramos SB, Assis LR, Theodoro RDS, Oliveira LRE, Regasini LO, Martins CHG	Anaerobe	10.1016/j.anaerobe.2022.102588	2022
Pathogenicity	Quorum sensing molecules regulate epithelial cytokine response and biofilm-related virulence of three Prevotella species.	Fteita D, Kononen E, Gursoy M, Ma X, Sintim HO, Gursoy UK	Anaerobe	10.1016/j.anaerobe.2018.09.001	2018
Pathogenicity	Mikania glomerata Sprengel extract and its major compound ent-kaurenoic acid display activity against bacteria present in endodontic infections.	Moreti DLC, Leandro LF, da Silva Moraes T, Moreira MR, Sola Veneziani RC, Ambrosio SR, Gomes BP, Martins CHG	Anaerobe	10.1016/j.anaerobe.2017.06.008	2017
Enzymology	Copaifera reticulata oleoresin: Chemical characterization and antibacterial properties against oral pathogens.	Bardaji DK, da Silva JJ, Bianchi TC, de Souza Eugenio D, de Oliveira PF, Leandro LF, Rogez HL, Venezianni RC, Ambrosio SR, Tavares DC, Bastos JK, Martins CH	Anaerobe	10.1016/j.anaerobe.2016.04.017	2016
Pathogenicity	Intraspecies Variability Affects Heterotypic Biofilms of Porphyromonas gingivalis and Prevotella intermedia: Evidences of Strain-Dependence Biofilm Modulation by Physical Contact and by Released Soluble Factors.	Barbosa GM, Colombo AV, Rodrigues PH, Simionato MR	PLoS One	10.1371/journal.pone.0138687	2015
Pathogenicity	Effect of estradiol on planktonic growth, coaggregation, and biofilm formation of the Prevotella intermedia group bacteria.	Fteita D, Kononen E, Soderling E, Gursoy UK	Anaerobe	10.1016/j.anaerobe.2014.02.003	2014
Pathogenicity	Development of Prevotella nigrescens-specific PCR primers based on the nucleotide sequence of a Pn23 DNA probe.	Kim MJ, Lee YS, Park JY, Kook JK	Anaerobe	10.1016/j.anaerobe.2010.12.005	2010
Metabolism	In vitro activation of the hemolysin in Prevotella nigrescens ATCC 33563 and Prevotella intermedia ATCC 25611.	Silva TA, Noronha FS, de Macedo Farias L, Carvalho MA	Res Microbiol	10.1016/j.resmic.2003.09.010	2004
	Bacterial concentrations determine the ability to implant in the root canal system and translocate to lymph nodes in germ-free mice.	de Melo Maltos SM, Ribeiro Sobrinho AP, Silva FV, Nicoli JR, Roque de Carvalho MA, Vieira LQ, de Macedo Farias L	J Endod	10.1097/00004770-200301000-00007	2003
Pathogenicity	Activity of endodontic antibacterial agents against selected anaerobic bacteria.	Ferreira CM, da Silva Rosa OP, Torres SA, Ferreira FB, Bernardinelli N	Braz Dent J	10.1590/s0103-64402002000200008	2002
Pathogenicity	Scanning electron microscopy study of the adhesion of Prevotella nigrescens to the dentin of prepared root canals.	Yang SE, Bae KS	J Endod	10.1097/00004770-200206000-00004	2002
Pathogenicity	In vitro effect of intracanal medicaments on strict anaerobes by means of the broth dilution method.	Rosa OP, Torres SA, Ferreira CM, Ferreira FB	Pesqui Odontol Bras	10.1590/s1517-74912002000100006	2002
Phylogeny	Survey for collagenase gene prtC in Porphyromonas gingivalis and Porphyromonas endodontalis isolated from endodontic infections.	Odell LJ, Baumgartner JC, Xia T, David LL	J Endod	10.1016/S0099-2399(99)80379-3	1999
Phylogeny	Use of PCR and sodium dodecyl sulfate-polyacrylamide gel electrophoresis techniques for differentiation of Prevotella intermedia sensu stricto and Prevotella nigrescens.	Premaraj T, Kato N, Fukui K, Kato H, Watanabe K	J Clin Microbiol	10.1128/JCM.37.4.1057-1061.1999	1999
Pathogenicity	In vitro adhesion of two strains of Prevotella nigrescens to the dentin of the root canal: the part played by different irrigation solutions.	Calas P, Rochd T, Druilhet P, Azais JM	J Endod	10.1016/S0099-2399(98)80088-5	1998
Phylogeny	Biochemical and genetic characterization of a Prevotella intermedia/nigrescens-like organism.	Kononen E, Matto J, Vaisanen-Tunkelrott ML, Frandsen EV, Helander I, Asikainen S, Finegold SM, Jousimies-Somer H	Int J Syst Bacteriol	10.1099/00207713-48-1-39	1998
Metabolism	Fermentation product analysis in the identification of black-pigmented bacteria from periodontitis.	Takada K, Hirasawa M	Microbios		1997
Metabolism	Hydrolytic and depolymerising enzyme activity of Prevotella intermedia and Prevotella nigrescens.	Stubbs S, Lewis MA, Waddington RJ, Embery G	Oral Dis	10.1111/j.1601-0825.1996.tb00237.x	1996
Metabolism	Characterization of immunoglobulin G-degrading proteases of Prevotella intermedia and Prevotella nigrescens.	Jansen HJ, Grenier D, Van der Hoeven JS	Oral Microbiol Immunol	10.1111/j.1399-302x.1995.tb00134.x	1995
Enzymology	Prevotella pleuritidis sp. nov., isolated from pleural fluid.	Sakamoto M, Ohkusu K, Masaki T, Kako H, Ezaki T, Benno Y.	Int J Syst Evol Microbiol	10.1099/ijs.0.64885-0	2007
Phylogeny	Phylogenetic characterization and proposal of a new pigmented species to the genus Prevotella: Prevotella pallens sp. nov.	Kononen E, Eerola E, Frandsen EV, Jalava J, Matto J, Salmenlinna S, Jousimies-Somer H.	Int J Syst Bacteriol	10.1099/00207713-48-1-47	1998
Phylogeny	"Bacteroides nordii" sp. nov. and "Bacteroides salyersae" sp. nov. isolated from clinical specimens of human intestinal origin.	Song YL, Liu CX, McTeague M, Finegold SM.	J Clin Microbiol	10.1128/jcm.42.12.5565-5570.2004	2004
Phylogeny	Prevotella aurantiaca sp. nov., isolated from the human oral cavity.	Sakamoto M, Suzuki N, Okamoto M	Int J Syst Evol Microbiol	10.1099/ijs.0.012831-0	2009
Phylogeny	Prevotella falsenii sp. nov., a Prevotella intermedia-like organism isolated from monkey dental plaque.	Sakamoto M, Kumada H, Hamada N, Takahashi Y, Okamoto M, Bakir MA, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.002626-0	2009
Phylogeny	Biochemical and chemical studies on strains designated Prevotella intermedia and proposal of a new pigmented species, Prevotella nigrescens sp. nov.	Shah HN, Gharbia SE	Int J Syst Bacteriol	10.1099/00207713-42-4-542	1992

References

#5019	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13386
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39314	; Curators of the CIP;
#45196	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 9560
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121297	Collection of Institut Pasteur ; Curators of the CIP; CIP 105552
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prevotella nigrescens (DSM 13386, ATCC 33563, NCTC 9336)

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