Prevotella bivia (DSM 20514, ATCC 29303, NCTC 11156)

Cell morphology

Colony morphology

Multimedia

• @ref:	66793
  multimedia content:	EM_DSM_20514_1.jpg
  multimedia.multimedia content:	EM_DSM_20514_1.jpg
  caption:	electron microscopic image
  intellectual property rights:	© HZI/Manfred Rohde
  manual_annotation:	1

• @ref:	66793
  multimedia content:	EM_DSM_20514_2.jpg
  multimedia.multimedia content:	EM_DSM_20514_2.jpg
  caption:	electron microscopic image
  intellectual property rights:	© HZI/Manfred Rohde
  manual_annotation:	1

• @ref:	66793
  multimedia content:	EM_DSM_20514_3.jpg
  multimedia.multimedia content:	EM_DSM_20514_3.jpg
  caption:	electron microscopic image
  intellectual property rights:	© HZI/Manfred Rohde
  manual_annotation:	1

• @ref:	66793
  multimedia content:	EM_DSM_20514_4.jpg
  multimedia.multimedia content:	EM_DSM_20514_4.jpg
  caption:	electron microscopic image
  intellectual property rights:	© HZI/Manfred Rohde
  manual_annotation:	1

• @ref:	66793
  multimedia content:	EM_DSM_20514_5.jpg
  multimedia.multimedia content:	EM_DSM_20514_5.jpg
  caption:	electron microscopic image
  intellectual property rights:	© HZI/Manfred Rohde
  manual_annotation:	1

Culture medium

@ref	Name	Growth	Medium link	Composition
8886	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
39197	MEDIUM 20 - for Anaerobic bacteria			Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
8886	CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)		Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l Starch 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Haemin 0.005 g/l Vitamin K3 0.0005 g/l Sodium resazurin 0.0005 g/l Distilled water Water Vitamin K1 NaOH
116825	CIP Medium 20		Medium recipe at CIP

Culture temp

Oxygen tolerance

Spore formation

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
116825	17632 ChEBI	nitrate	-	reduction
116825	16301 ChEBI	nitrite	-	reduction
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
116825	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	+	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68382	beta-galactosidase	-	3.2.1.23	from API zym
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
116825	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116825	oxidase	-
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
116825	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions	external links
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	palmitate biosynthesis	100	22 of 22
66794	CMP-KDO biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	glycogen metabolism	100	5 of 5
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	starch degradation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	vitamin K metabolism	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	cellulose degradation	80	4 of 5
66794	photosynthesis	78.57	11 of 14
66794	NAD metabolism	77.78	14 of 18
66794	d-mannose degradation	77.78	7 of 9
66794	vitamin B1 metabolism	76.92	10 of 13
66794	ppGpp biosynthesis	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	flavin biosynthesis	73.33	11 of 15
66794	tetrahydrofolate metabolism	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	pyrimidine metabolism	68.89	31 of 45
66794	purine metabolism	67.02	63 of 94
66794	serine metabolism	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	vitamin B6 metabolism	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	threonine metabolism	60	6 of 10
66794	citric acid cycle	57.14	8 of 14
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	glutamate and glutamine metabolism	53.57	15 of 28
66794	alanine metabolism	51.72	15 of 29
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	butanoate fermentation	50	2 of 4
66794	adipate degradation	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	pentose phosphate pathway	45.45	5 of 11
66794	cysteine metabolism	44.44	8 of 18
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	polyamine pathway	43.48	10 of 23
66794	oxidative phosphorylation	42.86	39 of 91
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	lipoate biosynthesis	40	2 of 5
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	methylglyoxal degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	lipid metabolism	38.71	12 of 31
66794	lysine metabolism	38.1	16 of 42
66794	histidine metabolism	37.93	11 of 29
66794	isoleucine metabolism	37.5	3 of 8
66794	ketogluconate metabolism	37.5	3 of 8
66794	methionine metabolism	34.62	9 of 26
66794	non-pathway related	34.21	13 of 38
66794	pantothenate biosynthesis	33.33	2 of 6
66794	L-lactaldehyde degradation	33.33	1 of 3
66794	formaldehyde oxidation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	enterobactin biosynthesis	33.33	1 of 3
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	octane oxidation	33.33	1 of 3
66794	phenylalanine metabolism	30.77	4 of 13
66794	propionate fermentation	30	3 of 10
66794	Entner Doudoroff pathway	30	3 of 10
66794	glycine metabolism	30	3 of 10
66794	tryptophan metabolism	28.95	11 of 38
66794	ubiquinone biosynthesis	28.57	2 of 7
66794	glutathione metabolism	28.57	4 of 14
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	degradation of hexoses	27.78	5 of 18
66794	d-xylose degradation	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	biotin biosynthesis	25	1 of 4
66794	degradation of sugar alcohols	25	4 of 16
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	sulfate reduction	23.08	3 of 13
66794	leucine metabolism	23.08	3 of 13
66794	urea cycle	23.08	3 of 13
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	valine metabolism	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18
66794	tyrosine metabolism	21.43	3 of 14

API zym

API rID32A

Isolation source categories

Isolation

Taxonmaps

69479

Global distribution of 16S sequence AB547673 (>99% sequence identity) for Prevotella bivia subclade from Microbeatlas

Aquatic Samples	1913
Soil Samples	1096
Animal Samples	88928
Plant Samples	553
Total Samples	92490

Risk assessment

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM26254v1 assembly for Prevotella bivia DSM 20514	scaffold	GCA_000262545	868129.3	2509601036	868129	75.67
124043	ASM4042808v1 assembly for Prevotella bivia ATCC 29303	contig	GCA_040428085			28125	72.05
66792	ASM17731v1 assembly for Prevotella bivia JCVIHMP010	contig	GCA_000177315	553171.3	647000292	553171	54.27

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8886	Prevotella bivia gene for 16S ribosomal RNA, partial sequence, strain: JCM 6331	AB547673	1490		28125
67770	Prevotella bivia strain ATCC 29303 16S ribosomal RNA gene, partial sequence	L16475	1471		28125
124043	Prevotella bivia strain ATCC 29303 16S ribosomal RNA gene, partial sequence.	PQ763968	1471		28125

GC content

Predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Profiling of vaginal microbial communities in Chilean women via self-sampling and nanopore sequencing.	Oliva-Arancibia B, Villanueva P, Ugalde JA.	Sci Rep	10.1038/s41598-025-23837-8	2025
Transcriptome	Gardnerella vaginalis, Fannyhessea vaginae, and Prevotella bivia Strongly Influence Each Other's Transcriptome in Triple-Species Biofilms.	Sousa LGV, Novak J, Franca A, Muzny CA, Cerca N.	Microb Ecol	10.1007/s00248-024-02433-9	2024
	Adaptation of key bacterial vaginosis-associated bacteria to a medium simulating genital tract secretions: a transcriptomic analysis.	Sousa LGV, Franca A, Pinheiro V, Muzny CA, Cerca N.	Front Genet	10.3389/fgene.2025.1552307	2025
	Dynamic changes in the gut microbiota composition during adalimumab therapy in patients with ulcerative colitis: implications for treatment response prediction and therapeutic targets.	Oh HN, Shin SY, Kim JH, Baek J, Kim HJ, Lee KM, Park SJ, Kim SY, Choi HK, Kim W, Sul WJ, Choi CH.	Gut Pathog	10.1186/s13099-024-00637-5	2024
	Prevotella timonensis degrades the vaginal epithelial glycocalyx through high fucosidase and sialidase activities.	Segui-Perez C, de Jongh R, Jonkergouw RLW, Pelayo P, Balskus EP, Zomer A, Strijbis K.	mBio	10.1128/mbio.00691-24	2024
	Genetic manipulations of nonmodel gut microbes.	Jin WB, Guo CJ.	Imeta	10.1002/imt2.216	2024
	Lactobacillus gasseri CECT 30648 shows probiotic characteristics and colonizes the vagina of healthy women after oral administration.	Perez M, Armengol E, Del Casale A, Campedelli I, Aldea-Perona A, Perez Otero M, Rodriguez-Palmero M, Espadaler-Mazo J, Huedo P.	Microbiol Spectr	10.1128/spectrum.00211-25	2025
Metabolism	Central Carbon Metabolism, Sodium-Motive Electron Transfer, and Ammonium Formation by the Vaginal Pathogen Prevotella bivia.	Schleicher L, Herdan S, Fritz G, Trautmann A, Seifert J, Steuber J.	Int J Mol Sci	10.3390/ijms222111925	2021
Phylogeny	Leveraging 16S rRNA data to uncover vaginal microbial signatures in women with cervical cancer.	Wu M, Yu H, Gao Y, Li H, Wang C, Li H, Ma X, Dong M, Li B, Bai J, Dong Y, Fan X, Zhang J, Yan Y, Qi W, Han C, Fan A, Xue F.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1024723	2023
	In vitro bacterial vaginosis biofilm community manipulation using endolysin therapy.	Johnston W, Ware A, Kuiters WF, Delaney C, Brown JL, Hagen S, Corcoran D, Cummings M, Ramage G, Kean R.	Biofilm	10.1016/j.bioflm.2022.100101	2023
Enzymology	Metabolic modelling of chronic wound microbiota predicts mutualistic interactions that drive community composition.	Phalak P, Henson MA.	J Appl Microbiol	10.1111/jam.14421	2019
Transcriptome	Gene expression of bacterial collagenolytic proteases in root caries.	Dame-Teixeira N, Parolo CCF, Maltz M, Rup AG, Devine DA, Do T.	J Oral Microbiol	10.1080/20002297.2018.1424475	2018
	Development of a Prevotella bivia PNA probe and a multiplex approach to detect three relevant species in bacterial vaginosis-associated biofilms.	Sousa LGV, Almeida C, Muzny CA, Cerca N.	NPJ Biofilms Microbiomes	10.1038/s41522-023-00411-6	2023
	Optimized bacterial absolute quantification method by qPCR using an exogenous bacterial culture as a normalization strategy in triple-species BV-like biofilms.	Lameira I, Pinto AS, Lima A, Muzny CA, Cerca N.	J Microbiol Methods	10.1016/j.mimet.2024.106895	2024
	In vitro antimicrobial activity of Bixa orellana L . Leaves extract against anaerobic bacteria associated to bacterial vaginosis and Lactobacillus spp.	Marcas J, Romero L, Tipiani O, Loyola S, Tamariz J.	Rev Peru Med Exp Salud Publica	10.17843/rpmesp.2022.394.11978	2022
	Key bacterial vaginosis-associated bacteria influence each other's growth in biofilms in rich media and media simulating vaginal tract secretions.	Sousa LGV, Muzny CA, Cerca N.	Biofilm	10.1016/j.bioflm.2024.100247	2025
	Six Bacterial Vaginosis-Associated Species Can Form an In Vitro and Ex Vivo Polymicrobial Biofilm That Is Susceptible to Thymbra capitata Essential Oil.	Rosca AS, Castro J, Sousa LGV, Franca A, Cavaleiro C, Salgueiro L, Cerca N.	Front Cell Infect Microbiol	10.3389/fcimb.2022.824860	2022
	A New PNA-FISH Probe Targeting Fannyhessea vaginae.	Sousa LGV, Castro J, Franca A, Almeida C, Muzny CA, Cerca N.	Front Cell Infect Microbiol	10.3389/fcimb.2021.779376	2021
Pathogenicity	Gemini Cationic Amphiphiles Control Biofilm Formation by Bacterial Vaginosis Pathogens.	Algburi A, Zhang Y, Weeks R, Comito N, Zehm S, Pinto J, Uhrich KE, Chikindas ML.	Antimicrob Agents Chemother	10.1128/aac.00650-17	2017
Pathogenicity	Vaginal host immune-microbiome-metabolite interactions associated with spontaneous preterm birth in a predominantly white cohort.	Cavanagh M, Amabebe E, Kulkarni NS, Papageorgiou MD, Walker H, Wyles MD, Anumba DO.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00671-4	2025
Pathogenicity	Bacteroidetocins Target the Essential Outer Membrane Protein BamA of Bacteroidales Symbionts and Pathogens.	Matano LM, Coyne MJ, Garcia-Bayona L, Comstock LE.	mBio	10.1128/mbio.02285-21	2021
Metabolism	Interstrain Variability of Human Vaginal Lactobacillus crispatus for Metabolism of Biogenic Amines and Antimicrobial Activity against Urogenital Pathogens.	Puebla-Barragan S, Watson E, van der Veer C, Chmiel JA, Carr C, Burton JP, Sumarah M, Kort R, Reid G.	Molecules	10.3390/molecules26154538	2021
	Analytical Performance Characteristics of a New Transcription-Mediated Amplification Assay for Treponema pallidum.	Getman D, Lin M, Barakat N, Skvoretz R, Godornes C, Swenson P, Nenninger A, Golden MR, Lukehart SA.	J Clin Microbiol	10.1128/jcm.00511-21	2021
Pathogenicity	Cationic amphiphiles against Gardnerella vaginalis resistant strains and bacterial vaginosis-associated pathogens.	Weeks RM, Moretti A, Song S, Uhrich KE, Karlyshev AV, Chikindas ML.	Pathog Dis	10.1093/femspd/ftz059	2019
	Altered Innate Immunity and Damaged Epithelial Integrity in Vaginal Microbial Dysbiosis.	Cheu RK, Mohammadi A, Schifanella L, Broedlow C, Driscoll CB, Miller CJ, Reeves RK, Yudin MH, Hensley-McBain T, Kaul R, Klatt NR.	Front Reprod Health	10.3389/frph.2022.876729	2022
Metabolism	Interactions between Lactobacillus crispatus and bacterial vaginosis (BV)-associated bacterial species in initial attachment and biofilm formation.	Machado A, Jefferson KK, Cerca N.	Int J Mol Sci	10.3390/ijms140612004	2013
	Bacterial vaginosis and health-associated bacteria modulate the immunometabolic landscape in 3D model of human cervix.	Laniewski P, Herbst-Kralovetz MM.	NPJ Biofilms Microbiomes	10.1038/s41522-021-00259-8	2021
	Design, Synthesis, and Characterization of TNP-2198, a Dual-Targeted Rifamycin-Nitroimidazole Conjugate with Potent Activity against Microaerophilic and Anaerobic Bacterial Pathogens.	Ma Z, He S, Yuan Y, Zhuang Z, Liu Y, Wang H, Chen J, Xu X, Ding C, Molodtsov V, Lin W, Robertson GT, Weiss WJ, Pulse M, Nguyen P, Duncan L, Doyle T, Ebright RH, Lynch AS.	J Med Chem	10.1021/acs.jmedchem.1c02045	2022
Metabolism	Chitosan Oligosaccharides Show Protective Effects in Coronary Heart Disease by Improving Antioxidant Capacity via the Increase in Intestinal Probiotics.	Jiang T, Xing X, Zhang L, Liu Z, Zhao J, Liu X.	Oxid Med Cell Longev	10.1155/2019/7658052	2019
	Transkingdom network reveals bacterial players associated with cervical cancer gene expression program.	Lam KC, Vyshenska D, Hu J, Rodrigues RR, Nilsen A, Zielke RA, Brown NS, Aarnes EK, Sikora AE, Shulzhenko N, Lyng H, Morgun A.	PeerJ	10.7717/peerj.5590	2018
	Degradation of naturally occurring and engineered antimicrobial peptides by proteases.	Moncla BJ, Pryke K, Rohan LC, Graebing PW.	Adv Biosci Biotechnol	10.4236/abb.2011.26059	2011
Metabolism	Prevotella bivia as a source of lipopolysaccharide in the vagina.	Aroutcheva A, Ling Z, Faro S.	Anaerobe	10.1016/j.anaerobe.2008.08.002	2008
	Lactobacillus-Deficient Cervicovaginal Bacterial Communities Are Associated with Increased HIV Acquisition in Young South African Women.	Gosmann C, Anahtar MN, Handley SA, Farcasanu M, Abu-Ali G, Bowman BA, Padavattan N, Desai C, Droit L, Moodley A, Dong M, Chen Y, Ismail N, Ndung'u T, Ghebremichael MS, Wesemann DR, Mitchell C, Dong KL, Huttenhower C, Walker BD, Virgin HW, Kwon DS.	Immunity	10.1016/j.immuni.2016.12.013	2017
	Quantitative survival of aerobic and anaerobic microorganisms in Port-A-Cul and Copan transport systems.	Stoner KA, Rabe LK, Austin MN, Meyn LA, Hillier SL.	J Clin Microbiol	10.1128/jcm.00161-08	2008
	Exploring potential of vaginal Lactobacillus isolates from South African women for enhancing treatment for bacterial vaginosis.	Happel AU, Kullin B, Gamieldien H, Wentzel N, Zauchenberger CZ, Jaspan HB, Dabee S, Barnabas SL, Jaumdally SZ, Dietrich J, Gray G, Bekker LG, Froissart R, Passmore JS.	PLoS Pathog	10.1371/journal.ppat.1008559	2020
Pathogenicity	Promising Prebiotic Candidate Established by Evaluation of Lactitol, Lactulose, Raffinose, and Oligofructose for Maintenance of a Lactobacillus-Dominated Vaginal Microbiota.	Collins SL, McMillan A, Seney S, van der Veer C, Kort R, Sumarah MW, Reid G.	Appl Environ Microbiol	10.1128/aem.02200-17	2018
	Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation.	Bloom SM, Mafunda NA, Woolston BM, Hayward MR, Frempong JF, Abai AB, Xu J, Mitchell AJ, Westergaard X, Hussain FA, Xulu N, Dong M, Dong KL, Gumbi T, Ceasar FX, Rice JK, Choksi N, Ismail N, Ndung'u T, Ghebremichael MS, Relman DA, Balskus EP, Mitchell CM, Kwon DS.	Nat Microbiol	10.1038/s41564-022-01070-7	2022
Enzymology	Use of the genomic subtractive hybridization technique to develop a real-time PCR assay for quantitative detection of Prevotella spp. in oral biofilm samples.	Nagashima S, Yoshida A, Suzuki N, Ansai T, Takehara T.	J Clin Microbiol	10.1128/jcm.43.6.2948-2951.2005	2005
Pathogenicity	In vitro activity of tomopenem (CS-023/RO4908463) against anaerobic bacteria.	Tanaka K, Mikamo H, Nakao K, Ichiishi T, Goto T, Yamagishi Y, Watanabe K.	Antimicrob Agents Chemother	10.1128/aac.00595-08	2009
Phylogeny	Use of PCR and sodium dodecyl sulfate-polyacrylamide gel electrophoresis techniques for differentiation of Prevotella intermedia sensu stricto and Prevotella nigrescens.	Premaraj T, Kato N, Fukui K, Kato H, Watanabe K.	J Clin Microbiol	10.1128/jcm.37.4.1057-1061.1999	1999
Pathogenicity	In vitro antimicrobial activity of razupenem (SMP-601, PTZ601) against anaerobic bacteria.	Tran CM, Tanaka K, Yamagishi Y, Goto T, Mikamo H, Watanabe K.	Antimicrob Agents Chemother	10.1128/aac.01038-10	2011
Pathogenicity	In Vitro Antibacterial Properties of Cefiderocol, a Novel Siderophore Cephalosporin, against Gram-Negative Bacteria.	Ito A, Sato T, Ota M, Takemura M, Nishikawa T, Toba S, Kohira N, Miyagawa S, Ishibashi N, Matsumoto S, Nakamura R, Tsuji M, Yamano Y.	Antimicrob Agents Chemother	10.1128/aac.01454-17	2018
Pathogenicity	Molecular Assay for Detection of Genetic Markers Associated with Decreased Susceptibility to Cephalosporins in Neisseria gonorrhoeae.	Peterson SW, Martin I, Demczuk W, Bharat A, Hoang L, Wylie J, Allen V, Lefebvre B, Tyrrell G, Horsman G, Haldane D, Garceau R, Wong T, Mulvey MR.	J Clin Microbiol	10.1128/jcm.00493-15	2015
Enzymology	Loop-mediated isothermal amplification method for rapid detection of the periodontopathic bacteria Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola.	Yoshida A, Nagashima S, Ansai T, Tachibana M, Kato H, Watari H, Notomi T, Takehara T.	J Clin Microbiol	10.1128/jcm.43.5.2418-2424.2005	2005
Pathogenicity	In vaginal fluid, bacteria associated with bacterial vaginosis can be suppressed with lactic acid but not hydrogen peroxide.	O'Hanlon DE, Moench TR, Cone RA.	BMC Infect Dis	10.1186/1471-2334-11-200	2011
Enzymology	pH gradient and distribution of streptococci, lactobacilli, prevotellae, and fusobacteria in carious dentine.	Kianoush N, Nguyen KA, Browne GV, Simonian M, Hunter N.	Clin Oral Investig	10.1007/s00784-013-1009-0	2014
Pathogenicity	In vitro antianaerobic activity of DX-619, a new des-fluoro(6) quinolone.	Tanaka K, Mikamo H, Nakao K, Watanabe K.	Antimicrob Agents Chemother	10.1128/aac.00639-06	2006
	Acid production by vaginal flora in vitro is consistent with the rate and extent of vaginal acidification.	Boskey ER, Telsch KM, Whaley KJ, Moench TR, Cone RA.	Infect Immun	10.1128/iai.67.10.5170-5175.1999	1999
Pathogenicity	Efficacy of rifaximin vaginal tablets in treatment of bacterial vaginosis: a molecular characterization of the vaginal microbiota.	Cruciani F, Brigidi P, Calanni F, Lauro V, Tacchi R, Donders G, Peters K, Guaschino S, Vitali B.	Antimicrob Agents Chemother	10.1128/aac.00061-12	2012
Metabolism	Dietary supplementation with probiotics during late pregnancy: outcome on vaginal microbiota and cytokine secretion.	Vitali B, Cruciani F, Baldassarre ME, Capursi T, Spisni E, Valerii MC, Candela M, Turroni S, Brigidi P.	BMC Microbiol	10.1186/1471-2180-12-236	2012
Enzymology	High levels of Gardnerella vaginalis detected with an oligonucleotide probe combined with elevated pH as a diagnostic indicator of bacterial vaginosis.	Sheiness D, Dix K, Watanabe S, Hillier SL.	J Clin Microbiol	10.1128/jcm.30.3.642-648.1992	1992
	Nuclear Magnetic Resonance Metabolomics of Symbioses between Bacterial Vaginosis-Associated Bacteria.	Horrocks V, Hind CK, Wand ME, Fady PE, Chan J, Hopkins JC, Houston GL, Tribe RM, Sutton JM, Mason AJ.	mSphere	10.1128/msphere.00166-22	2022
	Bolaamphiphile Analogues of 12-bis-THA Cl2 Are Potent Antimicrobial Therapeutics with Distinct Mechanisms of Action against Bacterial, Mycobacterial, and Fungal Pathogens.	Di Blasio S, Clarke M, Hind CK, Asai M, Laurence L, Benvenuti A, Hassan M, Semenya D, Man DK, Horrocks V, Manzo G, Van Der Lith S, Lam C, Gentile E, Annette C, Bosse J, Li Y, Panaretou B, Langford PR, Robertson BD, Lam JKW, Sutton JM, McArthur M, Mason AJ.	mSphere	10.1128/msphere.00508-22	2023
Enzymology	Detection of unculturable bacteria in periodontal health and disease by PCR.	Harper-Owen R, Dymock D, Booth V, Weightman AJ, Wade WG.	J Clin Microbiol	10.1128/jcm.37.5.1469-1473.1999	1999
	Anaerobic breast abscess caused by Prevotella bivia in non-lactating woman: A case report with diagnostic and clinical implications.	Massaro C, Cala C, Anastasia A, Lupo S, Alduina R, Fasciana T, Virruso R, Giammanco GM.	Diagn Microbiol Infect Dis	10.1016/j.diagmicrobio.2025.117112	2025
	The first case report of an intraosseous hemangioma complicated by Prevotella bivia infection.	Bahar Tokman H, Afacan MY, Celayir A, Davutluoglu E, Akgonul A, Kilincarslan AC, Tokuc E, Ozsahin MK, Botanlioglu H.	Anaerobe	10.1016/j.anaerobe.2025.102981	2025
	One-year restoration of vaginal health: synergistic dynamics of microbiome and metabolome following the elimination of high-grade cervical intraepithelial neoplasia.	Du H, Jiang X, Liu Y, Hou J, Li C, Wu R, Li SC, Dai W.	mSystems	10.1128/msystems.01190-25	2025
Pathogenicity	Interactions between bacterial vaginosis-associated microbiota and Trichomonas vaginalis modulate parasite-induced pathogenicity and host immune responses.	Chiu SF, Huang CY, Chen CY, Hsu WJ, Yeh YM, Shih YW, Chu LJ, Lin WN, Huang KY.	Parasit Vectors	10.1186/s13071-025-06996-5	2025
	Infections resulting from wild land and aquatic species injuries: A case series from Mornington Peninsula, Australia.	Seth I, Shadid O, Marcaccini G, Cuomo R, Rozen WM.	Injury	10.1016/j.injury.2025.112715	2025
Pathogenicity	Microbiome and Metaproteome of Craniofacial Implant Regions in Health and Disease.	Cortizo DL, Casarin RCV, Paz HES, Stolf CS, Monteiro MF, Labate MTV, Casati MZ, Dib LL.	Oral Dis	10.1111/odi.15398	2025
	Repurposing antimalarials: pyrimethamine exhibits superior in vitro activity to metronidazole against Gardnerella while sparing Lactobacillus.	Rosca AS, Chaponda EB, Beckers T, De Koning HP, Chico RM, Cools P.	J Antimicrob Chemother	10.1093/jac/dkaf157	2025
Pathogenicity	Gram-negative intratumoral bacteria mediate lymph node metastasis through LPS-TLR4/MAPK signaling pathway in cervical cancer.	Liu Y, Ma P, Liu D, Liu Y, Ran Z, Yang L, Xu L, Yin W, Chen F, Li L, Lu Y.	J Infect	10.1016/j.jinf.2025.106532	2025
Pathogenicity	Real-time PCR assay design and validation for Prevotella bivia, Peptostreptococcus anaerobius, and Dialister micraerophilus, bacteria associated with increased HIV susceptibility.	Nelson SG, Spyers-Duran M, Aziz M, Marcone D, Nault D, Demessie G, Kaul R, Galiwango RM, Yee R, Liu CM.	Sci Rep	10.1038/s41598-025-21406-7	2025
	Investigating Bacterial Vaginosis Pathogenesis Using Peptide Nucleic Acid-Fluorescence In Situ Hybridization With a Focus on the Roles of Gardnerella Species, Prevotella bivia, and Fannyhessea vaginae.	George SD, Amerson-Brown MH, Sousa LGV, Carter TM, Rinehart AH, Riegler AN, Leal SM, Aaron KJ, Hao J, Tamhane A, Dong C, Lammons JW, Elnaggar JH, Graves KJ, Laniewski P, Herbst-Kralovetz MM, Taylor CM, Cerca N, Muzny CA.	Open Forum Infect Dis	10.1093/ofid/ofaf556	2025
	Does the Vaginal Microbiota Influence the Incidence of the Preterm Premature Rupture of Membranes?	Feduniw S, Zeber-Lubecka N, Pruc M, Gaca Z, Szarpak L, Ciebiera M.	J Clin Med	10.3390/jcm14186577	2025
	HIV-associated penile anaerobes disrupt epithelial barrier integrity.	Buchanan LB, Shao Z, Galiwango RM, Constable S, Zuanazzi D, Biribawa VM, Ssemunywa HR, Namuniina A, Okech B, Edfeldt G, Tjernlund A, Tobian AAR, Park DE, Pham T, Aziz M, Salazar JE, Nelson S, Liu CM, Kaul R, Prodger JL.	PLoS Pathog	10.1371/journal.ppat.1013094	2025
	Antimicrobial Resistance Trends Among Obligate Anaerobic Bacteria Isolated From Chronic Suppurative Otitis Media Patients in a Tertiary Care Teaching Hospital in Central India.	Bhadade AA, Siddiqui F, Mishra U, Sidam S, Chouhan R, Tiwari R, Pichaikran V, Nema S.	Cureus	10.7759/cureus.92221	2025
	The investigation of the role of oral-originated Prevotella-induced inflammation in childhood asthma.	Yan T, Bao Y, Cao S, Jiang P, Zhang Z, Li L, Kang Y, Wu Q.	Front Microbiol	10.3389/fmicb.2024.1400079	2024
Transcriptome	Microbial and Transcriptomic Landscape Associated With Neutrophil Extracellular Traps in Perianal Fistulizing Crohn's Disease.	Cao D, Hu M, Yang N, Qian K, Hong J, Tang J, Bian Y, Zhang C, Wang X, Wu G, Chen H, Zhang Y, Wang Z, Cui Z.	Inflamm Bowel Dis	10.1093/ibd/izae202	2025
	Third Kuwaiti Multicenter Survey of Antibiotic Susceptibility of Anaerobic Bacteria: A Comparative Analysis of 20-Year Data.	Benwan KA, Jamal W, Shahin M.	Microb Drug Resist	10.1089/mdr.2024.0036	2024
	Microbe-binding Antibodies in the Female Genital Tract: Associations with the Vaginal Microbiome and Genital Immunology.	Liu R, Pollock J, Huibner S, Udayakumar S, Irungu E, Ngurukiri P, Muthoga P, Adhiambo W, Kimani J, Beattie T, Coburn B, Kaul R.	J Immunol	10.4049/jimmunol.2400233	2024
	Prevotella bivia Infection of a Horse Bite Wound.	Barton JC, Eisenberg AL.	Cureus	10.7759/cureus.66571	2024
	Laparoscopic Management of an Early Postoperative Pelvic Abscess Caused by Prevotella bivia Following a Deep Infiltrating Endometriosis Surgery.	Kaya B, Ince A, Sam Ozdemir M, Yuksel S.	Cureus	10.7759/cureus.66315	2024
Genetics	The first completed genome of species Prevotella bivia, assembled from a clinically derived strain PLW0727.	Peng Y, Cai X, Li M, Deng L, Wang Y, Qiu Y, Zhao L, Xiao Y, Xu L, Hou Q.	J Glob Antimicrob Resist	10.1016/j.jgar.2023.10.009	2023
	Do we need to reconsider our antibiotic regimen for preterm premature rupture of membranes? Pathogens and perinatal outcome in PPROM.	Schuler L, Hodel M, Stocker M, Braun C, Christmann C, Brambs C, Ardabili S.	BMC Pregnancy Childbirth	10.1186/s12884-025-08341-1	2025
Pathogenicity	The Impact of Prevotella on Neurobiology in Aging: Deciphering Dendritic Cell Activity and Inflammatory Dynamics.	Ahmed HS.	Mol Neurobiol	10.1007/s12035-024-04156-x	2024
Phylogeny	Vaginal anaerobes are associated with cervicitis: A case-control study.	Plummer EL, Vodstrcil LA, Danielewski JA, Murray GL, Doyle ML, Latimer RL, Fairley CK, Chow EPF, Garland SM, Bradshaw CS.	J Infect	10.1016/j.jinf.2024.106210	2024
	Study of the cervical canal microbiome and microbiocenosis in reproductive-age women with squamous intraepithelial lesion.	Peremykina A, Cheranev V, Shilyaev AY, Krivoy A, Repinskaia Z, Korostin D, Rebrikov D.	Front Microbiol	10.3389/fmicb.2025.1630092	2025
	An Eleven-Year Retrospective Survey of Anaerobic Bloodstream Infection in Adults in a General Hospital.	Yang R, Wang W, Yin G, Ma T, Tao J.	Infect Drug Resist	10.2147/idr.s482698	2024
	The First Infant Anaerobic Meningitis Infected by Prevotella bivia: A Case Report and Literature Review.	Sun Y, Li Z, Li Y, Zhang C, Wang M, Yu W, Liu G, Wang S.	Infect Drug Resist	10.2147/idr.s452189	2024
	[Balanoposthitis in the clinical practice of a urologist and dermatovenereologist: an interdisciplinary problem].	Khryanin A A, Sokolovskaya A V, Bocharova V K.	Urologiia		2023
	Determination of dysbiosis by the method of multiplex real-time polymerase chain reaction in chronic catarrhal gingivitis in children.	Polishchuk TV, Sheshukova OV, Mosiienko AS, Trufanova VP, Bauman SS, Kazakova KS.	Pol Merkur Lekarski	10.36740/merkur202403106	2024
	From Presentation to Prognosis: A Challenging Case of Multifocal Cerebral Micro Abscesses Due to Citrobacter Freundii.	Nandwana V, Cleary LM, Kodankandath TV.	Eur J Case Rep Intern Med	10.12890/2025_005290	2025
Genetics	The emergence of metronidazole-resistant Prevotella bivia harboring nimK gene in Japan.	Ito Y, Hashimoto Y, Suzuki M, Kaneko N, Yoshida M, Nakayama H, Tomita H.	Microbiol Spectr	10.1128/spectrum.00562-24	2024
	Impact of bacterial vaginosis on sexually transmitted viral infections: a bacterial point of view.	Segui-Perez C, van Smoorenburg MY, Maranus AE, Geijtenbeek TBH, Strijbis K.	FEMS Microbiol Rev	10.1093/femsre/fuaf039	2025
	Advances in the study of the correlation between balanoposthitis and skin microecology.	Wang M, Gao X, Zhang L.	Front Microbiol	10.3389/fmicb.2025.1564675	2025
Phylogeny	Changes in the vaginal microbiome in female patients with condyloma acuminatum and its impact on persistent HPV infection.	Liu Z, Wu Y, Wang C, Hou N, Liu X.	Sci Rep	10.1038/s41598-025-18900-3	2025
	Subcutaneous abscess in the shoulder caused by Prevotella bivia infection.	Hisamoto T, Hirabayashi M, Nakatani M, Akiyama Y, Takehana A, Jikuya S, Nakashima C, Shimoyama H, Kuwano Y.	Anaerobe	10.1016/j.anaerobe.2022.102609	2022
	Infection Leading to Breast Abscess Formation in Pregnancy: A Case Report.	Yu J, Chen J, Huang T, Gu X.	Int Med Case Rep J	10.2147/imcrj.s512859	2025
	The microbiome in endometrial cancer: vaginal milieu matters.	Govorov I, Komlichenko E, Ulrikh E, Dikareva E, Pervunina T, Vazhenina O, Dzharbaeva A, Kalinina O, Zaikova E, Razumova Z, Mints M, Sitkin S.	Front Med (Lausanne)	10.3389/fmed.2025.1533344	2025
	IgA and the gut-vagina axis.	Takada K.	Front Immunol	10.3389/fimmu.2025.1547303	2025
	Clinical and Surgical Insights into Zuska Disease: A Retrospective Analysis.	Cuniolo L, Diaz R, Pitto F, Murelli F, Cornacchia C, Depaoli F, Gipponi M, Margarino C, Boccardo C, Franchelli S, Pesce M, De Cian F, Fregatti P.	J Pers Med	10.3390/jpm15050170	2025
	Prevotella bivia Septic Arthritis in an Immunocompetent Adult: A Case Report and Review of Literature.	Dodin RE, Thompson H, Storandt MH, Vilenski L, Guerrero DM.	J Investig Med High Impact Case Rep	10.1177/23247096231194842	2023
	Comparison of microbial profiles and viral status along the vagina-cervix-endometrium continuum of infertile patients.	Jain M, Mladova E, Dobychina A, Kirillova K, Shichanina A, Anokhin D, Scherbakova L, Samokhodskaya L, Panina O.	Syst Biol Reprod Med	10.1080/19396368.2023.2195040	2023
	Bilateral bartholin's gland abscesses in a 4-year-old girl with vitamin a deficiency: a case report.	Kihara T, Kenzaka T, Hasegawa T, Uemura K, Funakoshi T.	BMC Infect Dis	10.1186/s12879-024-09382-1	2024
Metabolism	Highlight signatures of vaginal microbiota and metabolome contributed to the occurrence and recurrence of vulvovaginal candidiasis.	Liang Y, Huang Z, Fan S, Li C, Huang L, Huang C, Hutchins AP, Fang C, Zhang X.	Microbiol Spectr	10.1128/spectrum.01521-24	2024
	Associations between vaginal flora, MIP-1alpha, IL-17A, and clinical pregnancy rate in AIH.	Yang H, Gao C, Wang X, Qiu F, Wei M, Xia F.	Am J Reprod Immunol	10.1111/aji.13543	2022
	A rare case of fulminant sepsis secondary to postpartum pyomyoma caused by Prevotella bivia: a case report.	Ogawa T.	Ann Med Surg (Lond)	10.1097/ms9.0000000000000287	2023
	The Female Reproductive Tract Microbiota and Endometrial Cancer: A Systematic Review.	Vizza R, Belli F, Fabene P, Salari V, Casprini C, Corrado G, Lagana AS, Zorzato PC, Bosco M, Porcari I, Uccella S, Garzon S.	Int J Mol Sci	10.3390/ijms26188877	2025
	A Metagenomics Pipeline to Characterize Self-Collected Vaginal Microbiome Samples.	Thomas-White K, Hilt EE, Olmschenk G, Gong M, Phillips CD, Jarvis C, Sanford N, White J, Navarro P.	Diagnostics (Basel)	10.3390/diagnostics14182039	2024
	Prevotella bivia: A Rare Cause of Zuska's Breast Disease.	Aboud A, Smith A, Gumbs S, Ramcharan A.	Cureus	10.7759/cureus.28904	2022
	Association Between Vaginal Microbiota and Cervical Dysplasia Due to Persistent Human Papillomavirus Infection: A Systematic Review of Evidence from Shotgun Metagenomic Sequencing Studies.	Zukiene G, Narutyte R, Rudaitis V.	Int J Mol Sci	10.3390/ijms26094258	2025
	The Relationship Between the Vaginal Microbiota and the Ovarian Cancer Microenvironment: A Journey from Ideas to Insights.	Restaino S, Pellecchia G, Arcieri M, Pericolini E, Bogani G, Poli A, Paparcura F, Pregnolato S, Armenise D, Frossi B, Tell G, Tascini C, Driul L, Biasioli A, Capozzi VA, Ronsini C, Della Corte L, Martinelli C, Ercoli A, De Seta F, Vizzielli G.	Cells	10.3390/cells14201590	2025
	Infectious Thrombophlebitis of the Left Internal Jugular Vein With Tissierella praeacuta Isolation in a 71-Year-Old Female: A Case Report.	Howell S, Gurel-Headley M, Ferdman L, Ratzlaff C.	Cureus	10.7759/cureus.67478	2024
	Antimicrobial susceptibility profile of clinically relevant Bacteroides, Phocaeicola, Parabacteroides and Prevotella species, isolated by eight laboratories in the Netherlands.	Boiten KE, Notermans DW, Rentenaar RJ, van Prehn J, Bode LGM, Maat I, van der Zwet W, Jansz A, Siebers TJH, Rossen JWA, de Greeff SC, Hendrickx APA, Kuijper EJ, Veloo ACM.	J Antimicrob Chemother	10.1093/jac/dkae043	2024
	In vitro antibacterial activity of antiretroviral drugs on key commensal bacteria from the human microbiota.	Rubio-Garcia E, Ferrando N, Martin N, Balleste-Delpierre C, Miro JM, Paredes R, Casals-Pascual C, Vila J.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1306430	2023
	Vaginal microbiota molecular profiling and diagnostic performance of artificial intelligence-assisted multiplex PCR testing in women with bacterial vaginosis: a single-center experience.	Lu S, Li Z, Chen X, Chen F, Yao H, Sun X, Cheng Y, Wang L, Dai P.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1377225	2024
	Prevotella bivia cardiac implantable electronic device related endocarditis.	Fogelson B, Livesay J, Rohrer M, Edwards M, Hirsh JB.	IDCases	10.1016/j.idcr.2022.e01499	2022
	Diagnostic performance of an automated robot for MALDI target preparation in microbial identification.	Pranada AB, Cicatka M, Hess C, Karasek J.	J Clin Microbiol	10.1128/jcm.00434-24	2024
	Lactobacillus crispatus S-layer proteins modulate innate immune response and inflammation in the lower female reproductive tract.	Decout A, Krasias I, Roberts L, Gimeno Molina B, Charenton C, Brown Romero D, Tee QY, Marchesi JR, Ng S, Sykes L, Bennett PR, MacIntyre DA.	Nat Commun	10.1038/s41467-024-55233-7	2024
	Using In Vitro Models to Study the Interactions Between Environmental Exposures and Human Microbiota.	Cheng Q, Chen S.	Microorganisms	10.3390/microorganisms13020247	2025
	Penile microbiome: decoding its impact on HIV risk.	Nelson SG, Liu CM.	Curr Opin HIV AIDS	10.1097/coh.0000000000000865	2024
Genetics	Human papillomavirus, vaginal microbiota and metagenomics: the interplay between development and progression of cervical cancer.	Leon-Gomez P, Romero VI.	Front Microbiol	10.3389/fmicb.2024.1515258	2024
	Refining Unfavorable Vaginal Microbial Community in Infertile Women Subjected to Precision Probiotic Intervention: An Exploratory Single-Arm, Prospective, Open-Label, Interventional Study.	Cocomazzi G, Contu V, De Stefani S, Del Pup L, Buccheri M, Antinori M, Parmegiani L, De Ruvo D, Marino F, Virgili E, Allen C, Palini S, Ciampaglia W, Cerboneschi M, Baldini D, Baldini GM, Pazienza V.	Microorganisms	10.3390/microorganisms13030547	2025
	Scoping Review of Microbiota Dysbiosis and Risk of Preeclampsia.	Jordan MM, Amabebe E, Khanipov K, Taylor BD.	Am J Reprod Immunol	10.1111/aji.70003	2024
	Intracranial abscess due to Prevotella bivia: First case report from India.	Samantaray S, Biswas R, Sasidharan GM.	Anaerobe	10.1016/j.anaerobe.2020.102249	2020
Genetics	Causality between gut microbiota, immune cells, and breast cancer: Mendelian randomization analysis.	Lv R, Wang D, Wang T, Li R, Zhuang A.	Medicine (Baltimore)	10.1097/md.0000000000040815	2024
	Functionally enriched human polymorphisms associate to species in the chronic wound microbiome.	Gabrilska RA, Omeir K, Ancira J, Miller C, Tipton CD, Rumbaugh KP, Wolcott J, Noe A, Subasinghe K, Rowe M, Phillips N, Phillips CD.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00831-6	2025
	Infected calyceal diverticulum in pregnancy: A rare case.	Ngene MA, Habibi H, Lesane S, Amadi AC, Taormina MA, Hohlastos E.	Radiol Case Rep	10.1016/j.radcr.2024.08.021	2024
	Degradation of Resistant alpha-1,4-glucan by Vaginal Gardnerella Species is Associated with Bacterial Vaginosis.	Hertzberger R, Morselli S, Botschuijver S, Himschoot L, Steenbergen L, Bruisten S, Lewis W, Cools P, Kort R.	Curr Microbiol	10.1007/s00284-025-04459-9	2025
	Is the Physiological Composition of the Vaginal Microbiome Altered in High-Risk HPV Infection of the Uterine Cervix?	Rokos T, Holubekova V, Kolkova Z, Hornakova A, Pribulova T, Kozubik E, Biringer K, Kudela E.	Viruses	10.3390/v14102130	2022
	Peritonsillar abscess caused by Prevotella bivia during home quarantine for coronavirus disease 2019: Case report.	Yamagishi T, Arakawa N, Toyoguchi S, Mizuno K, Asami Y, Yamanaka Y, Yamamoto H, Tsuboi K.	Medicine (Baltimore)	10.1097/md.0000000000029469	2022
	Conservative Treatment of an Unusual Presentation of Iliopsoas Phlegmon Related to Infected Intrauterine Contraceptive Device.	Jamsari G, Choi JDW, Kakala B, Hu H, Sandler G.	Case Rep Surg	10.1155/2024/9916070	2024
	In Vitro Bactericidal Activity of a Neomycin-Polymyxin B-Nystatin Combination Compared to Metronidazole and Clindamycin Against the Main Bacteria Involved in Bacterial Vaginosis and Aerobic Vaginitis.	Feuillolay C, Salvatico S, Escola J, Quioc-Salomon B, Carrois F, Roques C.	Pharmaceuticals (Basel)	10.3390/ph18030340	2025
	Scrotal Abscess in a Japanese Patient Caused by Prevotella bivia and Streptococcus agalactiae, Successfully Treated with Cefazolin and Amoxicillin: A Case Report.	Watanabe H, Norimatsu Y, Ohno Y.	Int Med Case Rep J	10.2147/imcrj.s321547	2021
Pathogenicity	Interactions between bacterial vaginosis-associated microbiota and Trichomonas vaginalis modulate parasite-induced pathogenicity and host immune responses	Chiu S, Huang C, Chen C, Hsu W, Yeh Y, Shih Y, Chu L, Lin W, Huang K.	Parasit Vectors		2025
	Gardnerella vaginalis in urinary tract infections, are men spared?	Boyanova L, Marteva-Proevska Y, Gergova R, Markovska R.	Anaerobe	10.1016/j.anaerobe.2021.102438	2021
	Advancements in vaginal microbiota, Trichomonas vaginalis, and vaginal cell interactions: Insights from co-culture assays.	Cardoso FG, Tasca T.	Microb Cell	10.15698/mic2025.05.849	2025
	Successful laparoscopic resection of fallopian tube abscess caused by Escherichia coli in a 12-year-old adolescent virgin:a case report and review of the literature.	He XF, Du XP, Qiao CF.	BMC Pediatr	10.1186/s12887-023-04098-8	2023
	Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections.	Qin Y, Liao Y, Zhou J, Liu W, Chen H, Chen X, Wang W, Zhang N, Zhao Y, Wang L, Gu B, Liu S.	Microbiol Spectr	10.1128/spectrum.01850-24	2025
	A Comparative Longitudinal Study Analyzing Vaginal Microbiota Differences Between Term and Preterm Pregnancies in Korean Women.	Nam G, Lee KA, Kim SJ, Oh KY, Lee S, Lee HC, Kim SY, Park MH.	Medicina (Kaunas)	10.3390/medicina61040752	2025
	Impact of supplementing Limosilactobacillus fermentum MN-LF23 on the eradication of Helicobacter pylori with 14-day standard quadruple therapy: a randomized, double-blind, placebo-controlled trial.	Zhao Y, Niu X, Zhang Y, Zhao L, Zhang L, He J, Zhang Q, Mao Y, Wang F, Zhao X, Wang R.	Nutr J	10.1186/s12937-025-01124-6	2025
	Correlation between dysbiosis of vaginal microecology and endometriosis: A systematic review and meta-analysis.	Qing X, Xie M, Liu P, Feng O, Leng H, Guo H, Zhang Y, Ma Y, Zheng W.	PLoS One	10.1371/journal.pone.0306780	2024
Phylogeny	Cervicovaginal Microbiome and HPV: A Standardized Approach to 16S/ITS NGS and Microbial Community Profiling for Viral Association	Shen-Gunther J, Xia Q, Cai H, Wang Y.	Int J Mol Sci		2025
	Successful eradication of group B Streptococcus intraamniotic infection with antibiotics in preterm prelabor rupture of the membranes.	Warintaksa P, Romero R, Pongchaikul P, Vivithanaporn P, Meyyazhagan A, Yoon BH, Singsaneh A, Chaemsaithong P.	Am J Obstet Gynecol	10.1016/j.ajog.2024.06.003	2024
Genetics	Shotgun metagenomics of the vaginal microbiome in cervical shortening and preterm birth risk.	Lee KY, Shin SH, Park G, Kang SH, Kang HJ, Kim J, Lee JJ, Son GH, Hong JY.	Sci Rep	10.1038/s41598-025-23737-x	2025
	Vaginal microbiome and sexually-transmitted pathogens in Chinese reproductive-age women: a multicentre cross-sectional and longitudinal cohort study.	Chen M, Qi C, Qing W, Zhou Z, Zhang Y, Chen R, Hou Y, Ou J, CALM2004 Consortium Investigators, He Y, Zhou H.	Nat Commun	10.1038/s41467-025-64917-7	2025
	Microbial interactions among Gardnerella, Prevotella and Fannyhessea prior to incident bacterial vaginosis: protocol for a prospective, observational study.	Muzny CA, Elnaggar JH, Sousa LGV, Lima A, Aaron KJ, Eastlund IC, Graves KJ, Dong C, Van Gerwen OT, Luo M, Tamhane A, Long D, Cerca N, Taylor CM.	BMJ Open	10.1136/bmjopen-2023-083516	2024
	Molecular characterization of vaginal microbiota using a new 22-species qRT-PCR test to achieve a relative-abundance and species-based diagnosis of bacterial vaginosis.	Oyenihi AB, Haines R, Trama J, Faro S, Mordechai E, Adelson ME, Osei Sekyere J.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1409774	2024
	Secretor status is a modifier of vaginal microbiota-associated preterm birth risk.	Kundu S, Dos Santos Correia G, Lee YS, Ng S, Sykes L, Chan D, Lewis H, Brown RG, Kindinger L, Dell A, Feizi T, Haslam SM, Liu Y, Marchesi JR, MacIntyre DA, Bennett PR.	Microb Genom	10.1099/mgen.0.001323	2024
Pathogenicity	Bacterial vaginosis toxins impair sperm capacitation and fertilization.	Bhagwat S, Asadi L, McCarthy R, Ferreira J, Li P, Li E, Spivak S, Gaydon A, Reddy V, Armstrong C, Morrill SR, Zhou H, Lewis AL, Lewis WG, Santi CM.	Hum Reprod	10.1093/humrep/deaf132	2025
	Corpora cavernosum abscess and corporoglanular fistula following penile shunts for ischemic priapism.	Wang H, Dhar A, Wang A.	Urol Case Rep	10.1016/j.eucr.2023.102341	2023
	A pilot study using unique targeted testing of the urogenital microbiome has potential as a predictive test during IVF for implantation outcome.	Evans GE, Mahajan V, Wakeman S, Slatter T, Ponnampalam AP, Anderson TP, Sarwar M, Evans JJ.	Arch Gynecol Obstet	10.1007/s00404-023-06987-w	2023
	Genome-scale metabolic network reconstruction analysis identifies bacterial vaginosis-associated metabolic interactions.	Dillard LR, Glass EM, Kolling GL, Thomas-White K, Wever F, Markowitz R, Lyttle D, Papin JA.	Nat Commun	10.1038/s41467-025-59965-y	2025
	Microbiome and metabolomic changes associated with HPV clearance in women undergoing local excisional treatment for cervical intraepithelial neoplasia.	Pu X, Wang J, Gu Z, Ao H, Li C.	mSystems	10.1128/msystems.00511-25	2025
	Distinct anal microbiome is correlated with anal cancer precursors in MSM with HIV.	Brickman CE, Agnello M, Imam N, Camejo P, Pino R, Carroll LN, Chein A, Palefsky JM.	AIDS	10.1097/qad.0000000000003920	2024
	A Rare Paronychia with Superinfection with Prevotella bivia and Staphylococcus haemolyticus: The Importance of Early Microbiological Diagnosis.	Grande-Del-Arco J, Jimenez-Cristino MD, Garcia-de-la-Pena R, Fernandez-Espejo E, Cordoba-Fernandez A.	Pathogens	10.3390/pathogens9120999	2020
	Gut microbiota and risk of iron deficiency anemia: A two-sample Mendelian randomization study.	Lei W, Liu Z, Lai HP, Fu R.	Medicine (Baltimore)	10.1097/md.0000000000041617	2025
	Integrated profiling of semen microbiota and metabolome reveals dysregulation in primary idiopathic male infertility.	Yao H, Luo C, Xian Y, Liu B, Yang T, Tian R, Xiao X, Zhao W, Ying L, Xu J, Liu S, Jia Y, Luo X, Qiu D, Liu Y, Wu Q, Luo X, Liu Z, Li F.	J Transl Med	10.1186/s12967-025-07139-1	2025
	A longitudinal pilot study in pre-menopausal women links cervicovaginal microbiome to CIN3 progression and recovery	Banila C, Ladoukakis E, Scibior-Bentkowska D, Santiago L, Reuter C, Kleeman M, Nedjai B.	Commun Biol		2025
	Necrotizing Fasciitis Post-Cesarean Section Leading to Transabdominal Hysterectomy.	Liang A, Idowu MB, Eskind SJ, Patel SS.	AJP Rep	10.1055/a-2414-7696	2024
	Microbial and metabolic profiles associated with HPV infection and cervical intraepithelial neoplasia: a multi-omics study.	Pu X, Wang X, Wang J, Gu Z, Zhu H, Li C.	Microbiol Spectr	10.1128/spectrum.00192-25	2025
	INFLUENCE OF MICROBIOTA ON THE CLINICAL AND IMMUNO-HISTOCHEMICAL CHARACTERISTICS OF CHRONIC GENERALIZED CATARRHAL GINGIVITIS IN CHILDREN.	Polishchuk TV, Lokhmatova NM, Sheshukova OV, Tkachenko IM, Bauman SS, Maksymenko AI.	Wiad Lek	10.36740/wlek202101107	2021
	Vaginal microbial dynamics and pathogen colonization in a humanized microbiota mouse model.	Mejia ME, Mercado-Evans V, Zulk JJ, Ottinger S, Ruiz K, Ballard MB, Fowler SW, Britton RA, Patras KA.	NPJ Biofilms Microbiomes	10.1038/s41522-023-00454-9	2023
	The vaginal microbiome and HIV transmission dynamics.	Cherenack EM, Broedlow CA, Klatt NR.	Curr Opin HIV AIDS	10.1097/coh.0000000000000869	2024
	Exploiting the Anti-Biofilm Effect of the Engineered Phage Endolysin PM-477 to Disrupt In Vitro Single- and Dual-Species Biofilms of Vaginal Pathogens Associated with Bacterial Vaginosis.	Castro J, Sousa LGV, Franca A, Podpera Tisakova L, Corsini L, Cerca N.	Antibiotics (Basel)	10.3390/antibiotics11050558	2022
Pathogenicity	The relationship between gut and nasopharyngeal microbiome composition can predict the severity of COVID-19.	Martin-Castano B, Diez-Echave P, Garcia-Garcia J, Hidalgo-Garcia L, Ruiz-Malagon AJ, Molina-Tijeras JA, Rodriguez-Sojo MJ, Redruello-Romero A, Martinez-Zaldivar M, Mota E, Cobo F, Diaz-Villamarin X, Alvarez-Estevez M, Garcia F, Morales-Garcia C, Merlos S, Garcia-Flores P, Colmenero-Ruiz M, Hernandez-Quero J, Nunez M, Rodriguez-Cabezas ME, Carazo A, Martin J, Moron R, Rodriguez Nogales A, Galvez J.	Elife	10.7554/elife.95292	2025
	Classification and Regression Trees for Bacterial Vaginosis Diagnosis in Pregnant Women Based on High-Throughput Quantitative PCR.	Loquet A, Le Guern R, Grandjean T, Duployez C, Bauduin M, Kipnis E, Brabant G, Subtil D, Dessein R.	J Mol Diagn	10.1016/j.jmoldx.2020.11.004	2021
Pathogenicity	A Combination of Lacticaseibacillus paracasei CECT 30660 and Bifidobacterium longum subsp. infantis CECT 7210 Cell-Free Supernatants Reduces LPS-Induced Preterm Birth and Systemic Inflammation in Pregnant Mice.	Quesada-Vazquez S, De Almagro Garcia MC, Cifuentes-Orjuela G, Antolin A, Alcaide-Hidalgo JM, Jimenez J, Puiggros F, Caimari A, Sabench F, Del Bas JM, Escote X, Moreno-Munoz JA.	Nutrients	10.3390/nu17213429	2025
	The Prevalence of Bacterial Vaginosis in Pregnant Women in Slovenia, Determined via Microscopy and Semi-Quantitative Relative Culture, and Its Association with Adverse Pregnancy Outcomes.	Starc M, Lucovnik M, Erzen Vrlic P, Jeverica S.	Microorganisms	10.3390/microorganisms13030588	2025
	Nonpuerperal breast abscess due to Prevotella bivia.	Boucher A, Quaranta D, Emonet S, Serratrice J, Coen M.	Clin Case Rep	10.1002/ccr3.2824	2020
	Identification and treatment of Enterococcus avium-induced diabetic foot ulcer: a case report and microbiome analysis.	Jin Y, Zhu T, Cai X, Fu Z, Pan Q, Tu H, Wang S, Li Y.	Front Med (Lausanne)	10.3389/fmed.2024.1502337	2024
	Impact of antimicrobials on penile HIV susceptibility and immunology in uncircumcised men: A randomized phase 1/2 clinical trial.	Galiwango RM, Okech B, Park DE, Buchanan L, Shao Z, Bagaya B, Mpendo J, Joag V, Yegorov S, Nanvubya A, Biribawa VM, Namatovu T, Kato C, Kawoozo B, Ssetaala A, Muwanga M, Aziz M, Pham T, Huibner S, Tobian AAR, Liu CM, Prodger JL, Kaul R.	Cell Rep Med	10.1016/j.xcrm.2024.101705	2024
	Insertive vaginal sex is associated with altered penile immunology and enrichment of Gardnerella vaginalis in uncircumcised Ugandan men.	Day E, Galiwango RM, Park D, Huibner S, Aziz M, Anok A, Nnamutete J, Isabirye Y, Wasswa JB, Male D, Kigozi G, Tobian AAR, Prodger JL, Liu CM, Kaul R.	Am J Reprod Immunol	10.1111/aji.13801	2024
	An unusual case of fulminant generalized peritonitis secondary to purulent salpingitis caused by Prevotella bivia - case report with literature review.	Kostov S, Slavchev S, Dzhenkov D, Strashilov S, Yordanov A.	Germs	10.18683/germs.2020.1185	2020
	Distribution of anaerobic bacteria and their sensitivity pattern to several antibiotics at the clinical microbiology laboratory of school of medicine, universitas Indonesia, Jakarta in 2019-2020.	Tjampakasari CR, Prasetyo DS, Ningsih I, Kiranasari A.	Iran J Microbiol	10.18502/ijm.v14i1.8797	2022
	Microbiome Profile in Patients with Adult Balanoposthitis: Relationship with Redundant Prepuce, Genital Mucosa Physical Barrier Status and Inflammation.	Li M, Mao JX, Jiang HH, Huang CM, Gao XH, Zhang L.	Acta Derm Venereol	10.2340/00015555-3833	2021
	The Vaginal Microbiome of Transgender and Gender Nonbinary Individuals.	Winston McPherson G, Goldstein Z, Salipante SJ, Rongitsch J, Hoffman NG, Dy GW, Penewit K, Greene DN.	Transgend Health	10.1089/trgh.2022.0100	2024
	The Vaginal Microbiota, Human Papillomavirus, and Cervical Dysplasia-A Review.	Kazlauskaite J, Zukiene G, Rudaitis V, Bartkeviciene D.	Medicina (Kaunas)	10.3390/medicina61050847	2025
	Selective labeling and visualization of viral and bacterial neuraminidases using ortho-quinone methide-based probes.	Alvarado-Melendez EI, Ruessink ST, Strijbis K, Wennekes T.	RSC Chem Biol	10.1039/d5cb00170f	2025
	Characterization of vaginal prokaryotes and eukaryotes microbiota and its link to sexually transmitted infections.	Moya-Beltran A, Sanchez C, Borquez B C, Reyes T T, Villanueva D H, Soto S C, Leon G M, Mieres-Amigo P, Saez MA, Quatrini R, Martin AJM, Alburquenque C.	Sci Rep	10.1038/s41598-025-14573-0	2025
	Advances in Research on the Relationship between Vaginal Microbiota and Adverse Pregnancy Outcomes and Gynecological Diseases.	Zhao F, Hu X, Ying C.	Microorganisms	10.3390/microorganisms11040991	2023
	Determination of Effect of Morus alba Extract and Lactobacillus rhamnosus on Vaginal Microbiota and SAP Gene (1-10) Profile With Candida albicans Exosome Administration in Rats.	Ucar M, Celebi D, Celebi O, Baser S, Guler MC, Tanyeli A, Kiliclioglu M, Yilmaz A, Yildirim S.	Microbiologyopen	10.1002/mbo3.70120	2025
Enzymology	Severe preeclampsia is associated with a higher relative abundance of Prevotella bivia in the vaginal microbiota.	Lin CY, Lin CY, Yeh YM, Yang LY, Lee YS, Chao A, Chin CY, Chao AS, Yang CY.	Sci Rep	10.1038/s41598-020-75534-3	2020
	Gut microbiota and viral respiratory infections: microbial alterations, immune modulation, and impact on disease severity: a narrative review.	El-Khoury G, Hajjar C, Geitani R, Karam Sarkis D, Butel MJ, Barbut F, Abifadel M, Kapel N.	Front Microbiol	10.3389/fmicb.2025.1605143	2025
	Three piece penile prosthesis salvage with chlorhexidine gluconate and length preservation: our technique and outcomes.	Razdan S, Siegal AR, Celtik KE, Carrion R, Valenzuela RJ.	Am J Clin Exp Urol		2023
	Effects of vaginal microbiota on in vitro fertilization outcomes in women with different infertility causes.	Zhao H, Wang C, Narsing Rao MP, Rafiq M, Luo G, Li S, Kang Y-Q.	Microbiol Spectr	10.1128/spectrum.01255-24	2025
	A Review on Microbial Species for Forensic Body Fluid Identification in Healthy and Diseased Humans.	Dass M, Singh Y, Ghai M.	Curr Microbiol	10.1007/s00284-023-03413-x	2023
	Reproductive tract microbiota dysbiosis in ovarian endometrioma and adenomyosis: multi-site 16S rRNA profiling and functional impact of key bacterial species on human endometrial stromal cells.	Li J, Zhang Y, Zhang J, Yue C, Guo L, Yang G, Jiang Z, Ren D, Yu T.	BMC Microbiol	10.1186/s12866-025-04412-7	2025
	The associations between low abundance of Mycoplasma hominis and female fecundability: a pregnancy-planning cohort study.	Hong X, Yin J, Wang W, Zhao F, Ding X, Yu H, Zhang X, Wang B.	BMC Microbiol	10.1186/s12866-022-02545-7	2022
	[Antimicrobial Susceptibility Profiles of Prevotella Species Determined by Gradient Test Method in Two Centers in Istanbul].	Ulger Toprak N, Akgul O, Kulekci G, Soyletir G.	Mikrobiyol Bul	10.5578/mb.69309	2020
	The injectable cationic double-crosslinked hydrogel facilitates bone regeneration and repair through sustained antibacterial activity.	Xie Y, Yu Y, Cai Z, Sun J, Bi W, Yang F, Zhou Q, Wu X, Li R, Zhu K, Yu Y, Cui W, Liu W, Sun Y.	Mater Today Bio	10.1016/j.mtbio.2025.102461	2025
	Renal and perinephric abscesses involving Lactobacillus jensenii and Prevotella bivia in a young woman following ureteral stent procedure.	Mohan A, Rubin J, Chauhan P, Ramirez JL, Giese G.	J Community Hosp Intern Med Perspect	10.1080/20009666.2020.1742494	2020
	The Combination of Clindamycin and Gentamicin Is Adequate for Pelvic Inflammatory Disease: A Retrospective Cohort Study.	Chen LY, Harnod T, Chang YH, Chen H, Ding DC.	J Clin Med	10.3390/jcm10184145	2021
	Microbiota in adult perianal abscess revealed by metagenomic next-generation sequencing.	Hong J-C, Chen J-S, Jiang Z-J, Chen Z-C, Ruan N, Yao X-P.	Microbiol Spectr	10.1128/spectrum.03474-23	2024
Cultivation	Practical media formulations for rapid growth of Lactobacillus iners and other vaginal bacteria.	Serrador D, Campbell JR, Getz LJ, Cheung D, Shefraw G, Kaul R, Navarre WW.	Appl Environ Microbiol	10.1128/aem.00183-25	2025
	Prevotella timonensis Bacteria Associated With Vaginal Dysbiosis Enhance Human Immunodeficiency Virus Type 1 Susceptibility Of Vaginal CD4+ T Cells.	van Teijlingen NH, van Smoorenburg MY, Sarrami-Forooshani R, Zijlstra-Willems EM, van Hamme JL, Borgdorff H, van de Wijgert JHHM, van Leeuwen E, van der Post JAM, Strijbis K, Ribeiro CMS, Geijtenbeek TBH.	J Infect Dis	10.1093/infdis/jiae166	2024
	Renal pelvis urobiome dysbiosis is associated with postoperative systemic inflammatory response syndrome after percutaneous nephrolithotomy.	Wang Q, Chen X, Deng G, Huang K, Hong S, Jiang K.	mSystems	10.1128/msystems.00780-25	2025
	Successful Treatment of Bilateral Renal Mucormycosis With Isavuconazole: A Case Report.	Najjar Y, Botros S, Acker E, Ramani A, Beers K.	Cureus	10.7759/cureus.42219	2023
Pathogenicity	Co-occurrence network analysis reveals the alterations of the skin microbiome and metabolome in adults with mild to moderate atopic dermatitis.	P Gomes PW, Mannochio-Russo H, Mao J, Zhao HN, Ancira J, Tipton CD, Dorrestein PC, Li M.	mSystems	10.1128/msystems.01119-23	2024
	Impact of Dapivirine and Placebo Vaginal Rings on the Microbiota of Adolescent, Lactating, and Postmenopausal Females.	Austin MN, Meyn LA, Avolia HA, Petrina MA, Cosentino LA, Alphonse C, Chen BA, Bunge K, Noguchi L, Beigi R, Squires K, Hillier SL.	J Infect Dis	10.1093/infdis/jiab590	2022
	The human vaginal microbiota: from clinical medicine to models to mechanisms.	Ottinger S, Robertson CM, Branthoover H, Patras KA.	Curr Opin Microbiol	10.1016/j.mib.2023.102422	2024
	Rapid detection of bacteria and antimicrobial resistant genes in intraamniotic infection using nanopore adaptive sampling.	Chaemsaithong P, Jenjaroenpun P, Pongchaikul P, Singsaneh A, Thaipisuttikul I, Romero R, Wongsurawat T.	Am J Obstet Gynecol	10.1016/j.ajog.2023.08.004	2023
	Assessing a diagnosis tool for bacterial vaginosis.	Singh R, Ramsuran V, Mitchev N, Niehaus AJ, Han KSS, Osman F, Ngcapu S, Karim SA, Rompalo A, Garrett N, Mlisana K.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-020-03862-3	2020
	SERS-PLSR Analysis of Vaginal Microflora: Towards the Spectral Library of Microorganisms.	Berus SM, Adamczyk-Poplawska M, Gozdzik K, Przedpelska G, Szymborski TR, Stepanenko Y, Kaminska A.	Int J Mol Sci	10.3390/ijms232012576	2022
	Etiology, clinical manifestations, and management methods of cryptitis beside the preputial frenulum in men.	Fan W, Zhang Q, Fan Z, Wei M, Zhu Y.	Basic Clin Androl	10.1186/s12610-024-00219-0	2024
Genetics	WGS Analysis of Staphylococcus warneri Outbreak in a Neonatal Intensive Care Unit.	Zhang X, Zhou Y, Fu L, Zhou L, Cheng X, Zhang W, Tan Z.	Infect Drug Resist	10.2147/idr.s473525	2024
	Trends in infections detected in women with cervicitis over a decade.	Vodstrcil LA, Plummer EL, Nguyen TV, Fairley CK, Chow EPF, Phillips TR, Bradshaw CS.	Front Reprod Health	10.3389/frph.2025.1539186	2025
	VIBES: A consensus subtyping of the vaginal microbiota reveals novel classification criteria.	Fernandez-Edreira D, Linares-Blanco J, V-Del-Rio P, Fernandez-Lozano C.	Comput Struct Biotechnol J	10.1016/j.csbj.2023.11.050	2024
	Microbiome in Male Genital Mucosa (Prepuce, Glans, and Coronal Sulcus): A Systematic Review.	Goncalves MFM, Fernandes AR, Rodrigues AG, Lisboa C.	Microorganisms	10.3390/microorganisms10122312	2022
Genetics	Temporal dynamics and species-level complexity of Prevotella spp. in the human gut microbiota: implications for enterotypes and health.	Han N, Peng X, Zhang T, Qiang Y, Li X, Zhang W.	Front Microbiol	10.3389/fmicb.2024.1414000	2024
	Integrated analysis of microbiome and metabolome reveals insights into cervical neoplasia aggravation in a Chinese cohort.	Zhai Q, Zhao L, Wang M, Li L, Li LA, Ye M, Li M, Xu C, Meng Y.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1556153	2025
	Primary infectious costochondritis due to Prevotella nigrescens in an immunocompetent patient: clinical and imaging findings.	Derouane F, Lambert M, De Greef J, Malghem J, Lecouvet FE.	Skeletal Radiol	10.1007/s00256-019-3148-0	2019
	Models of Murine Vaginal Colonization by Anaerobically Grown Bacteria.	Morrill SR, Agarwal K, Saha S, Lewis WG, Gilbert NM, Lewis AL.	J Vis Exp	10.3791/64032	2022
	Effect of initiation of antiretroviral drugs for HIV prevention or treatment on the vaginal microbiome of pregnant women in Malawi.	Saidi F, Graybill LA, Tang JH, Phanga T, Milala B, Banda G, Kamija M, Kasaro M, Mutale W, Price J, Chinula L, Stringer J, Hosseinipour MC, Chi BH, Ravel J, Holm JB.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00697-8	2025
	Identification and characterization of antibacterial peptides produced by Lactobacillus plantarum 1407.	Sajan S, Saravanan R.	Bioimpacts	10.34172/bi.2024.29912	2024
	The vaginal microbiota and innate immunity after local excisional treatment for cervical intraepithelial neoplasia.	Mitra A, MacIntyre DA, Paraskevaidi M, Moscicki AB, Mahajan V, Smith A, Lee YS, Lyons D, Paraskevaidis E, Marchesi JR, Bennett PR, Kyrgiou M.	Genome Med	10.1186/s13073-021-00977-w	2021
	Recurrent Cystitis Associated With 2 Programmed Death 1 Inhibitors: A Rare Case Report and Literature Review.	Fan Y, Zhao J, Mi Y, Zhang Z, Geng Y, Zhou L, Shen L, Zhang Z.	J Immunother	10.1097/cji.0000000000000484	2023
Enzymology	Pelvic inflammatory disease and causative pathogens in older women in a medical center in eastern Taiwan: A retrospective cross-sectional study.	Chen PC, Li PC, Ding DC.	PLoS One	10.1371/journal.pone.0257627	2021
	A Rare Cause of a Scrotal Abscess due to the Symbiotic Infection of Gardnerella vaginalis and Prevotella bivia in an Adult Male.	Bekasiak A, Dammann F, Nader C.	Pathogens	10.3390/pathogens9020093	2020
	A Massive Ewing Sarcoma of the Rib: A Case Report with Literature Review.	Fahad N, Hamideh D, Zareef R, Akel S.	Case Rep Pediatr	10.1155/2022/6921004	2022
	Nasal Microbiome in Granulomatosis with Polyangiitis Compared to Chronic Rhinosinusitis.	Brozek-Madry E, Burska Z, Zycinska K, Sierdzinski J.	Diagnostics (Basel)	10.3390/diagnostics14151673	2024
	Strong correlation between urine and vaginal swab samples for bacterial vaginosis.	Naicker D, Ramsuran V, Naicker M, Dessai F, Giandhari J, Tinarwo P, Abbai N.	S Afr J Infect Dis	10.4102/sajid.v36i1.199	2021
	Distribution of Vaginal and Gut Microbiome in Advanced Maternal Age.	Huang Y, Li D, Cai W, Zhu H, Shane MI, Liao C, Pan S.	Front Cell Infect Microbiol	10.3389/fcimb.2022.819802	2022
Pathogenicity	Preparation and preliminary evaluation of bio-nanocomposites based on hydroxyapatites with antibacterial properties against anaerobic bacteria.	Zawisza K, Sobierajska P, Nowak N, Kedziora A, Korzekwa K, Pozniak B, Tikhomirov M, Miller J, Mrowczynska L, Wiglusz RJ.	Mater Sci Eng C Mater Biol Appl	10.1016/j.msec.2019.110295	2020
	Molecular Testing for the Diagnosis of Bacterial Vaginosis.	Savicheva AM.	Int J Mol Sci	10.3390/ijms25010449	2023
	Deep Neck Space Infection in HIV-Infected Children: A Case Series.	Hari K, Mungul S, Maharaj S.	Cureus	10.7759/cureus.11081	2020
	Alterations in the vaginal microbiota of patients with preterm premature rupture of membranes.	Yan C, Hong F, Xin G, Duan S, Deng X, Xu Y.	Front Cell Infect Microbiol	10.3389/fcimb.2022.858732	2022
	Effect of Gellan Gum on the Properties of Collagen-HPMC Freeze-Dried Hydrogels for Mucosal Administration.	Luca I, Albu Kaya MG, Tutuianu R, Dinu-Pirvu CE, Marin MM, Popa L, Titorencu I, Anuta V, Ghica MV.	Gels	10.3390/gels11100793	2025
	Association of Chlamydia trachomatis burden with the vaginal microbiota, bacterial vaginosis, and metronidazole treatment.	Ardizzone CM, Taylor CM, Toh E, Lillis RA, Elnaggar JH, Lammons JW, Mott PD, Duffy EL, Shen L, Quayle AJ.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1289449	2023
	The renal pelvis urobiome in the unilateral kidney stone patients revealed by 2bRAD-M.	Hong SY, Yang YY, Xu JZ, Xia QD, Wang SG, Xun Y.	J Transl Med	10.1186/s12967-022-03639-6	2022
	An Indirect Fluorescence Microscopy Method to Assess Vaginal Lactobacillus Concentrations.	Lima A, Muzny CA, Cerca N.	Microorganisms	10.3390/microorganisms12010114	2024
	Vaginal microbiota and personal risk factors associated with HPV status conversion-A new approach to reduce the risk of cervical cancer?	Yang Z, Zhang Y, Stubbe-Espejel A, Zhao Y, Liu M, Li J, Zhao Y, Tong G, Liu N, Qi L, Hutchins A, Lin S, Li Y.	PLoS One	10.1371/journal.pone.0270521	2022
Genetics	Heritable Tissue-Specific Gene Expression Associates With Chronic Wound Microbial Species.	Omeir K, Ancira J, Gabrilska R, Tipton C, Miller C, Noe A, Subasinghe K, Rowe M, Phillips N, Wolcott J, Philips CD.	Wound Repair Regen	10.1111/wrr.70055	2025
	The science at HIVR4P 2024: The era of choice in biomedical HIV prevention.	Grinsztejn B, Appay V, Bekker LG, Beyrer C, Donnell D, Sanchez J, Canagasabey D, Coutinho C, Ganor Y, Muturi-Kioi V, Ortblad KF, Cooney E, Devisich G, Ellenberg P, Ghiglione Y, K'Orimba K, Ssemambo PK, Ludwig-Barron NT, Mielke DK, Mullick R, Muthui MK, Radusky PD, Sendaula E, Tirmizi SRH, Sanchez AVM, Vega J, Pebody R.	J Int AIDS Soc	10.1002/jia2.70001	2025
	Lactobacillus iners and gasseri, Prevotella bivia and HPV Belong to the Microbiological Signature Negatively Affecting Human Reproduction.	Campisciano G, Iebba V, Zito G, Luppi S, Martinelli M, Fischer L, De Seta F, Basile G, Ricci G, Comar M.	Microorganisms	10.3390/microorganisms9010039	2020
	Vaginal microbiota dysmicrobism and role of biofilm-forming bacteria.	Campisciano G, Zanotta N, Petix V, Corich L, De Seta F, Comar M.	Front Biosci (Elite Ed)	10.2741/e839	2018
	Bacterial Species from Vaginal Microbiota Differently Affect the Production of the E6 and E7 Oncoproteins and of p53 and p-Rb Oncosuppressors in HPV16-Infected Cells.	Nicolo S, Antonelli A, Tanturli M, Baccani I, Bonaiuto C, Castronovo G, Rossolini GM, Mattiuz G, Torcia MG.	Int J Mol Sci	10.3390/ijms24087173	2023
	Atopobium vaginae and Prevotella bivia Are Able to Incorporate and Influence Gene Expression in a Pre-Formed Gardnerella vaginalis Biofilm.	Castro J, Rosca AS, Muzny CA, Cerca N.	Pathogens	10.3390/pathogens10020247	2021
	Immunomodulatory Role of Vitamin D on Gut Microbiome in Children.	Tabassum A, Ali A, Zahedi FD, Ismail NAS.	Biomedicines	10.3390/biomedicines11051441	2023
	Effects of Nut Intake on Gut Microbiome Composition and Gut Function in Adults: A Systematic Review and Meta-analysis.	Snelson M, Biesiekierski JR, Chen S, Sultan N, Cardoso BR.	Adv Nutr	10.1016/j.advnut.2025.100465	2025
Genetics	Differential co-expression networks of the gut microbiota are associated with depression and anxiety treatment resistance among psychiatric inpatients.	Thompson DS, Fu C, Gandhi T, Fowler JC, Frueh BC, Weinstein BL, Petrosino J, Hadden JK, Carlson M, Coarfa C, Madan A.	Prog Neuropsychopharmacol Biol Psychiatry	10.1016/j.pnpbp.2022.110638	2023
	Meta-transcriptomics Reveals Dysbiosis of the Respiratory Microbiome in Older Adults with Long COVID	Liao M, Cai J, Zhu F, Lan Y, Xu T, Guo J, Xue Q, Wen Y, Zou F, Zhang Y, Zhang S, Yan Y, Ai J, Cui J, Zhang W.	Research (Wash D C)
Pathogenicity	Retrospective study of pathogens involved in vaginitis among Chinese women.	Pan Z, Wu Y, Li Y, Hu X, Zhao Y, Liu Y.	BMC Womens Health	10.1186/s12905-023-02510-0	2023
	Performance verification and clinical evaluation of the NAP-Fluo Cycler system for detecting five genital tract pathogens based on microfluidic technology.	Wang Y, Xu Q, Cai J, Zheng L, Zuo W, Liu J, Cao J, Lin M, Liu H, Ye H.	Pract Lab Med	10.1016/j.plabm.2024.e00417	2024
	A Rare Case of Escherichia coli Chest Wall Abscess With Rib Osteomyelitis in a Patient With Crohn's Disease.	Dadlani A, Bandikatla S, Koch JA.	Cureus	10.7759/cureus.13860	2021
	Immunoinformatic evaluation for the development of a potent multi-epitope vaccine against bacterial vaginosis caused by Gardnerella vaginalis.	Motamedi H, Shoja S, Abbasi M.	PLoS One	10.1371/journal.pone.0316699	2025
	Prevalence of Sexually Transmitted Diseases in Asymptomatic Renal Transplant Recipients.	Sarier M, Sepin Ozen N, Guler H, Duman I, Yuksel Y, Tekin S, Yavuz AH, Yucetin L, Erdogan Yilmaz M.	Exp Clin Transplant	10.6002/ect.2017.0232	2018
	The microRNA Cargo of Human Vaginal Extracellular Vesicles Differentiates Parasitic and Pathobiont Infections from Colonization by Homeostatic Bacteria.	Cezar-de-Mello PFT, Ryan S, Fichorova RN.	Microorganisms	10.3390/microorganisms11030551	2023
	Functionality of the Na+-translocating NADH:quinone oxidoreductase and quinol:fumarate reductase from Prevotella bryantii inferred from homology modeling.	Hau JL, Schleicher L, Herdan S, Simon J, Seifert J, Fritz G, Steuber J.	Arch Microbiol	10.1007/s00203-023-03769-5	2023
	Crystal Violet Staining Alone Is Not Adequate to Assess Synergism or Antagonism in Multi-Species Biofilms of Bacteria Associated With Bacterial Vaginosis.	Castro J, Lima A, Sousa LGV, Rosca AS, Muzny CA, Cerca N.	Front Cell Infect Microbiol	10.3389/fcimb.2021.795797	2021
	Arthroplasty after septic arthritis of the native hip and knee: retrospective analysis of 49 joints.	Portier E, Zeller V, Kerroumi Y, Heym B, Marmor S, Chazerain P.	J Bone Jt Infect	10.5194/jbji-7-81-2022	2022
	Microbiome Profiling Using Shotgun Metagenomic Sequencing Identified Unique Microorganisms in COVID-19 Patients With Altered Gut Microbiota.	Li S, Yang S, Zhou Y, Disoma C, Dong Z, Du A, Zhang Y, Chen Y, Huang W, Chen J, Song D, Chen Z, Liu P, Li S, Zheng R, Liu S, Razzaq A, Chen X, Tao S, Yu C, Feng T, Liao W, Peng Y, Jiang T, Huang J, Wu W, Hu L, Wang L, Li S, Xia Z.	Front Microbiol	10.3389/fmicb.2021.712081	2021
Phylogeny	Dysbiosis of gut microbiota with enriched pro-inflammatory species in children with idiopathic short stature: a case-control study	Zeng Q, Feng X, Hu Y, Su S, Luo B, Chen J.	Sci Rep		2025
Pathogenicity	A multicenter survey of antimicrobial susceptibility of Prevotella species as determined by Etest methodology.	Ulger Toprak N, Veloo ACM, Urban E, Wybo I, Justesen US, Jean-Pierre H, Morris T, Akgul O, Kulekci G, Soyletir G, Nagy E, ESCMID Study Group for Anaerobic Infections (ESGAI).	Anaerobe	10.1016/j.anaerobe.2018.05.005	2018
Phenotype	Gardnerella vaginalis and Prevotella bivia Trigger Distinct and Overlapping Phenotypes in a Mouse Model of Bacterial Vaginosis.	Gilbert NM, Lewis WG, Li G, Sojka DK, Lubin JB, Lewis AL.	J Infect Dis	10.1093/infdis/jiy704	2019
	Bacterial Vaginosis and Vulvovaginal Candidiasis Pathophysiologic Interrelationship.	Sobel JD, Vempati YS.	Microorganisms	10.3390/microorganisms12010108	2024
	The dynamic communities of oral microbiome in neonates.	Guo H, Li J, Yao H, Liu Y, Ji Y, Zhang J, Zhao Y, Du M.	Front Microbiol	10.3389/fmicb.2022.1052525	2022
	[Analysis on the distribution and drug resistance features of anaerobes isolated from clinical infectious specimens].	Wang YY, Han YQ, Guo SF, Fu Q, Wang JR.	Zhonghua Yi Xue Za Zhi	10.3760/cma.j.issn.0376-2491.2018.36.004	2018
Pathogenicity	Three metronidazole-resistant Prevotella bivia strains harbour a mobile element, encoding a novel nim gene, nimK, and an efflux small MDR transporter.	Veloo ACM, Chlebowicz M, Winter HLJ, Bathoorn D, Rossen JWA.	J Antimicrob Chemother	10.1093/jac/dky236	2018
	A Case of an Abscessed Cystic Endometriotic Lesion in the Vesico-uterine Pouch after Oocyte Retrieval.	Matsuda S, Akira S, Kaseki H, Watanabe K, Ono S, Ichikawa M, Takeshita T.	Gynecol Minim Invasive Ther	10.4103/gmit.gmit_12_20	2021
	Quantitative profiling of the vaginal microbiota improves resolution of the microbiota-immune axis.	Armstrong E, Liu R, Pollock J, Huibner S, Udayakumar S, Irungu E, Ngurukiri P, Muthoga P, Adhiambo W, Yegorov S, Kimani J, Beattie T, Coburn B, Kaul R.	Microbiome	10.1186/s40168-025-02039-4	2025
	Diverse vaginal microbiota in healthy Japanese women: a combined relative and quantitative analyses.	Ito M, Kataoka M, Sato Y, Nachi H, Nomoto K, Okada N.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1487990	2024
	A Comprehensive Investigation on Catalytic Behavior of Anaerobic Jar Gassing Systems and Design of an Enhanced Cultivation System.	Sayin FS, Erdal H, Ulger NT, Aksu MB, Guncu MM.	Bioengineering (Basel)	10.3390/bioengineering11111068	2024
	Fournier's Gangrene under Sodium-Glucose Cotransporter-2 Inhibitors Therapy in Gynecological Patients.	Serrano Olave A, Bueno Moral AI, Martinez Banon C, Gonzalez Mesa E, Jimenez Lopez JS.	Int J Environ Res Public Health	10.3390/ijerph19106261	2022
	Gardnerella vaginalis-binding IgA in the urethra of sexually experienced males.	Liu R, Galiwango RM, Park D, Huibner S, Aziz M, Anok A, Nnamutete J, Isbirye Y, Wasswa JB, Male D, Kigozi G, Tobian AAR, Prodger JL, Liu C, Coburn B, Kaul R.	Microbiome	10.1186/s40168-024-02007-4	2025
Metabolism	Syntrophic bacterial and host-microbe interactions in bacterial vaginosis.	Lee EM, Srinivasan S, Purvine SO, Fiedler TL, Leiser OP, Proll SC, Minot SS, Djukovic D, Raftery D, Johnston C, Fredricks DN, Deatherage Kaiser BL.	ISME J	10.1093/ismejo/wraf055	2025
Genetics	The vaginal microbiome is associated with endometrial cancer grade and histology.	Hakimjavadi H, George SH, Taub M, Dodds LV, Sanchez-Covarrubias AP, Huang M, Pearson JM, Slomovitz BM, Kobetz EN, Gharaibeh R, Sowamber R, Pinto A, Chamala S, Schlumbrecht MP.	Cancer Res Commun	10.1158/2767-9764.crc-22-0075	2022
	Procedures for determining the antimicrobial activity of maggot excretions and secretions of the green bottle fly: a narrative literature review.	Dallavecchia DL, Lima E Silva AA, Debelian ACM, Aguiar VM, Silva Filho RG.	Braz J Med Biol Res	10.1590/1414-431x2025e14851	2025
	Efficacy and Durability of Intravenous Ertapenem Therapy for Recalcitrant Hidradenitis Suppurativa.	Nosrati A, Ch'en PY, Torpey ME, Shokrian N, Ball G, Benesh G, Andriano TM, Zhu TR, Heibel HD, Hosgood HD, Campton KL, Cohen SR.	JAMA Dermatol	10.1001/jamadermatol.2023.6201	2024
	Vaginal microbiome, antiretroviral concentrations, and HIV genital shedding in the setting of hormonal contraception initiation in Malawi.	Lantz AM, Cottrell ML, Corbett AH, Chinula L, Kourtis AP, Nelson JAE, Tegha G, Hurst S, Gajer P, Ravel J, Haddad LB, Tang JH, Nicol MR.	AIDS	10.1097/qad.0000000000003686	2023
	Purulent Proctitis Caused by Prevotella bivia in a Homosexual Male.	Masadeh M, Hossain S, Dunkelberg J, Gerke H.	ACG Case Rep J	10.14309/crj.2016.151	2016
Phylogeny	Microbiota analysis of perimenopausal women experiencing recurrent vaginitis in conjunction with urinary tract infection.	Bi Y, Wang Y, Li W, Chen Y, Qin J, Zheng H.	BMC Microbiol	10.1186/s12866-024-03709-3	2025
	Characterization of Vaginal Microbial Community Dynamics in the Pathogenesis of Incident Bacterial Vaginosis, a Pilot Study.	Elnaggar JH, Lammons JW, Taylor CM, Toh E, Ardizzone CM, Dong A, Aaron KJ, Luo M, Tamhane A, Lefkowitz EJ, Quayle AJ, Nelson DE, Muzny CA.	Sex Transm Dis	10.1097/olq.0000000000001821	2023
Phylogeny	Single-Molecule Approach to 16S rRNA for Vaginal Microbiome Signatures in Response to Metronidazole Treatment.	Qin H, Jiao J, A D, Hua M, Han K, Du H, Wang Z, Li J, Zhang D, Xiao B, Chen C.	Microbiol Spectr	10.1128/spectrum.01706-22	2023
	Pubic symphysis osteomyelitis with associated vesico-symphyseal fistula: a difficult diagnosis.	Wechsler B, Devries J, Yim D.	BMJ Case Rep	10.1136/bcr-2021-244336	2021
	Human papillomavirus molecular prevalence in south China and the impact on vaginal microbiome of unvaccinated women.	Wang T, Li W, Cai M, Ji S, Wang Y, Huang N, Jiang Y, Zhang Z.	mSystems	10.1128/msystems.00738-24	2024
	Effects of Lactiplantibacillus plantarum LM1215 on Candida albicans and Gardnerella vaginalis.	Bae WY, Lee YJ, Jo S, Shin SL, Kim TR, Sohn M, Seol HJ.	Yonsei Med J	10.3349/ymj.2023.0490	2024
	The Relationship Between Insertive Oral and Anal Sex and Select Measures of the Composition of the Urethral Microbiota Among Men Who Have Sex With Men.	Chambers LC, Tapia KA, Srinivasan S, Proll S, Morgan JL, Hoffman NG, Lowens MS, Glick SN, Khosropour CM, Golden MR, Hughes JP, Manhart LE, Fredricks DN.	Sex Transm Dis	10.1097/olq.0000000000001959	2024
Metabolism	Insights from metagenomics into gut microbiome associated with acute coronary syndrome therapy.	Guan Y, Zhao S, Li J, Zhang W, Guo Z, Luo Y, Jiang X, Li J, Liu J, Chen X, Zhao Z, Zhang Z.	Front Microbiol	10.3389/fmicb.2024.1369478	2024
	Female reproductive tract microbiota varies with MHC profile.	Leclaire S, Bandekar M, Rowe M, Ritari J, Jokiniemi A, Partanen J, Allinen P, Kuusipalo L, Kekalainen J.	Proc Biol Sci	10.1098/rspb.2024.1334	2024
	The importance of the bacterial spectrum in the clinical diagnostics and management of patients with spontaneous pyogenic spondylodiscitis and isolated spinal epidural empyema: a 20-year cohort study at a single spine center.	Hijazi MM, Siepmann T, El-Battrawy I, Schrottner P, Podlesek D, Schackert G, Juratli TA, Eyupoglu IY, Filis A.	BMC Infect Dis	10.1186/s12879-023-08946-x	2024
	Vaginal Microbiome and Pregnancy Complications: A Review	Gerede A, Nikolettos K, Vavoulidis E, Margioula-Siarkou C, Petousis S, Giourga M, Fotinopoulos P, Salagianni M, Stavros S, Dinas K, Nikolettos N, Domali E.	J Clin Med		2024
	Influence of Early Life Factors on the Breast Milk and Fecal Microbiota of Mother-Newborn Dyads.	Cervantes-Monroy E, Zarzoza-Mendoza IC, Canizales-Quinteros S, Moran-Ramos S, Villa-Morales J, Lopez-Contreras BE, Carmona-Sierra FV, Rodriguez-Cruz M.	Microorganisms	10.3390/microorganisms12112142	2024
	Congenital Cheek Fistula: A Rare Case of Developmental Abnormality in the Buccal Area.	Kitano D, Sakakibara S, Ishida Y, Nomura T, Terashi H.	Cureus	10.7759/cureus.15657	2021
	Landscapes of gut bacterial and fecal metabolic signatures and their relationship in severe preeclampsia.	Liu X, Zeng X, Li X, Xin S, Zhang F, Liu F, Zeng Y, Wu J, Zou Y, Xiong X.	J Transl Med	10.1186/s12967-024-05143-5	2024
Phylogeny	Filtering ASVs/OTUs via mutual information-based microbiome network analysis.	Mokhtari EB, Ridenhour BJ.	BMC Bioinformatics	10.1186/s12859-022-04919-0	2022
	Corynebacterium periprosthetic joint infection: a systematic review of 52 cases at 2.5 years follow-up.	Seutz Y, Backer H, Akgun D, Adelhoefer S, Kriechling P, Gonzalez MR, Karczewski D.	Arch Orthop Trauma Surg	10.1007/s00402-023-04844-8	2023
	Inflammatory cytokine biomarkers of asymptomatic sexually transmitted infections and vaginal dysbiosis: a multicentre validation study.	Masson L, Barnabas S, Deese J, Lennard K, Dabee S, Gamieldien H, Jaumdally SZ, Williamson AL, Little F, Van Damme L, Ahmed K, Crucitti T, Abdellati S, Bekker LG, Gray G, Dietrich J, Jaspan H, Passmore JS.	Sex Transm Infect	10.1136/sextrans-2017-053506	2019
Enzymology	Performance of two blood culture systems to detect anaerobic bacteria. Is there any difference?	Mueller-Premru M, Jeverica S, Papst L, Nagy E.	Anaerobe	10.1016/j.anaerobe.2017.03.006	2017
Pathogenicity	Unlocking the Interactions Between the Whole-Body Microbiome and HPV Infection: A Literature Review.	Papamentzelopoulou M, Pitiriga VC.	Pathogens	10.3390/pathogens14030293	2025
	Association of Probiotic Treatment With Antibiotics in Male Accessory Gland Infections.	Grande G, Pompa G, Astorri AL, Pontecorvi A, Milardi D.	Am J Mens Health	10.1177/15579883221119064	2022
	Development of an infant colon simulating in vitro model, I-TIM-2, to study the effects of modulation strategies on the infant gut microbiome composition and function.	Colberg O, Hermes GDA, Licht TR, Wichmann A, Baker A, Laursen MF, Wellejus A.	Microbiol Spectr	10.1128/spectrum.00724-24	2024
	Temporal composition of the cervicovaginal microbiome associates with hrHPV infection outcomes in a longitudinal study.	Molina MA, Leenders WPJ, Huynen MA, Melchers WJG, Andralojc KM.	BMC Infect Dis	10.1186/s12879-024-09455-1	2024
	Evaluation of Various Diagnostic Strategies for Bacterial Vaginosis, Including a New Approach Based on MALDI-TOF Mass Spectrometry.	Abou Chacra L, Drouet H, Ly C, Bretelle F, Fenollar F.	Microorganisms	10.3390/microorganisms12010111	2024
	Gut Microbiota Composition Can Predict Colonization by Multidrug-Resistant Bacteria in SARS-CoV-2 Patients in Intensive Care Unit: A Pilot Study.	Garcia-Garcia J, Diez-Echave P, Yuste ME, Chueca N, Garcia F, Garcia F, Cabeza-Barrera J, Fernandez-Varon E, Galvez J, Colmenero M, Rodriguez-Cabezas ME, Rodriguez-Nogales A, Moron R.	Antibiotics (Basel)	10.3390/antibiotics12030498	2023
	Log (Lactobacillus crispatus/ Gardnerella vaginalis): a new indicator of diagnosing bacterial vaginosis.	Deng T, Shang A, Zheng Y, Zhang L, Sun H, Wang W.	Bioengineered	10.1080/21655979.2022.2027059	2022
	Diagnostic Role of mNGS in Polymicrobial Periprosthetic Joint Infection.	Mei J, Hu H, Zhu S, Ding H, Huang Z, Li W, Yang B, Zhang W, Fang X.	J Clin Med	10.3390/jcm12051838	2023
Genetics	Metagenomic analysis reveals the novel role of vaginal Lactobacillus iners in Chinese healthy pregnant women	Wang X, Jiang Q, Tian X, Chen W, Mai J, Lin G, Huo Y, Zheng H, Yan D, Wang X, Li T, Gao Y, Mou X, Zhao W.	NPJ Biofilms Microbiomes		2025
	Lemierre's Syndrome: A Lethal Complication of Acute Tonsillitis.	Amarnani S, Ranjan A.	Cureus	10.7759/cureus.30072	2022
Pathogenicity	The Dwindling Microbiota of Aerobic Vaginitis, an Inflammatory State Enriched in Pathobionts with Limited TLR Stimulation.	Oerlemans EFM, Wuyts S, Bellen G, Wittouck S, De Boeck I, Ruban K, Allonsius CN, van den Broek MFL, Donders GGG, Lebeer S.	Diagnostics (Basel)	10.3390/diagnostics10110879	2020
	Gardnerella Species and Their Association With Bacterial Vaginosis.	Munch MM, Strenk SM, Srinivasan S, Fiedler TL, Proll S, Fredricks DN.	J Infect Dis	10.1093/infdis/jiae026	2024
	Association between labor epidural analgesia and gut microbiota: A prospective cohort study.	Hu JH, Sheng J, Guo HM, Liu H, Zhang X, Han B, Peng K, Ji FH.	Heliyon	10.1016/j.heliyon.2024.e29883	2024
Pathogenicity	Vaginal Bacteria and Proinflammatory Host Immune Mediators as Biomarkers of Human Immunodeficiency Virus Acquisition Risk Among African Women.	Srinivasan S, Richardson BA, Wallis JM, Fiedler TL, Strenk SM, Hoffman NG, Proll S, Chirenje ZM, Livant EW, Fredricks DN, Hillier SL, Marrazzo JM.	J Infect Dis	10.1093/infdis/jiae406	2024
Genetics	Revealing oral microbiota composition and functionality associated with heavy cigarette smoking.	Al Bataineh MT, Dash NR, Elkhazendar M, Alnusairat DMH, Darwish IMI, Al-Hajjaj MS, Hamid Q.	J Transl Med	10.1186/s12967-020-02579-3	2020
Phylogeny	Research of the potential biomarkers in vaginal microbiome for persistent high-risk human papillomavirus infection.	Chao X, Sun T, Wang S, Tan X, Fan Q, Shi H, Zhu L, Lang J.	Ann Transl Med	10.21037/atm.2019.12.115	2020
	Identification and Characterization of Planktonic Biofilm-Like Aggregates in Infected Synovial Fluids From Joint Infections.	Bidossi A, Bottagisio M, Savadori P, De Vecchi E.	Front Microbiol	10.3389/fmicb.2020.01368	2020
Pathogenicity	Intrauterine colonization with Gardnerella vaginalis and Mobiluncus mulieris induces maternal inflammation but not preterm birth in a mouse model.	Joseph A, Lewis EL, Ferguson B, Guan Y, Anton L, Elovitz MA.	Am J Reprod Immunol	10.1111/aji.13749	2023
	Vaginal Microbiota Molecular Profiling in Women with Bacterial Vaginosis: A Novel Diagnostic Tool.	Savicheva AM, Krysanova AA, Budilovskaya OV, Spasibova EV, Khusnutdinova TA, Shalepo KV, Beliaeva NR, Safarian GK, Sapozhnikov KV, Tapilskaya NI, Kogan IY.	Int J Mol Sci	10.3390/ijms242115880	2023
Genetics	Gut resistome of NSCLC patients treated with immunotherapy.	Iwan E, Grenda A, Bomba A, Bielinska K, Wasyl D, Kieszko R, Rolska-Kopinska A, Chmielewska I, Krawczyk P, Rybczynska-Tkaczyk K, Olejnik M, Milanowski J.	Front Genet	10.3389/fgene.2024.1378900	2024
	The role of the genital microbiota in the acquisition and pathogenesis of sexually transmitted infections.	Waltmann A, Thomas C, Duncan JA.	Curr Opin Infect Dis	10.1097/qco.0000000000000893	2023
	Infection Induced Fetal Inflammatory Response Syndrome (FIRS): State-of- the-Art and Medico-Legal Implications-A Narrative Review.	Giovannini E, Bonasoni MP, Pascali JP, Giorgetti A, Pelletti G, Gargano G, Pelotti S, Fais P.	Microorganisms	10.3390/microorganisms11041010	2023
	The association between lifestyle factors and the composition of the vaginal microbiota: a review.	Morsli M, Gimenez E, Magnan C, Salipante F, Huberlant S, Letouzey V, Lavigne JP.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-024-04915-7	2024
	Alterations in lung and gut microbiota reduce diversity in patients with nontuberculous mycobacterial pulmonary disease.	Choi JY, Shim B, Park Y, Kang YA.	Korean J Intern Med	10.3904/kjim.2023.097	2023
	Changes in the Vaginal Microbiome during the Pregnancy to Postpartum Transition.	Nunn KL, Witkin SS, Schneider GM, Boester A, Nasioudis D, Minis E, Gliniewicz K, Forney LJ.	Reprod Sci	10.1007/s43032-020-00438-6	2021
	An Updated Conceptual Model on the Pathogenesis of Bacterial Vaginosis.	Muzny CA, Taylor CM, Swords WE, Tamhane A, Chattopadhyay D, Cerca N, Schwebke JR.	J Infect Dis	10.1093/infdis/jiz342	2019
	Microbiome alterations in women with pelvic organ prolapse and after anatomical restorative interventions.	Kim M, Lee S, Kim HS, Kwon MY, Yoo J, Kim MJ.	Sci Rep	10.1038/s41598-023-44988-6	2023
Pathogenicity	Gut microbiota interacting with vitamin D but not anandamide might contribute to the pathogenesis of preeclampsia: a preliminary study.	Han XQ, Jiang HH, Chen ML, Han DY, Zhou SF, Wang JW, Ji SS, Wang LY, Lou JW, Li MQ.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1469054	2024
	A case of cavernosal abscess after neglected penile fracture and bacteremia.	Lazarou L, Berdempes M, Markopoulos T, Kostakopoulos N, Spyropoulos K, Mitsogiannis IC.	Urol Ann	10.4103/ua.ua_104_18	2019
Genetics	Comparison of Metagenomic Sequencing and the NanoString nCounter Analysis System for the Characterization of Bacterial and Viral Communities in Vaginal Samples.	Wylie TN, Schrimpf J, Gula H, Herter BN, Wylie KM.	mSphere	10.1128/msphere.00197-22	2022
	Polyp and tumor microenvironment reprogramming in colorectal cancer: insights from mucosal bacteriome and metabolite crosstalk.	Feizi H, Kafil HS, Plotnikov A, Kataev V, Balkin A, Filonchikova E, Rezaee MA, Ghotaslou R, Sadrkabir M, Kadkhoda H, Kamounah FS, Nikitin S.	Ann Clin Microbiol Antimicrob	10.1186/s12941-025-00777-9	2025
	Effectiveness and safety of morinidazole in the treatment of pelvic inflammatory disease: A multicenter, prospective, open-label phase IV trial.	Zhou T, Yuan M, Cui P, Li J, Jia F, Wang S, Liu R.	Front Med (Lausanne)	10.3389/fmed.2022.888186	2022
	IgA coating of vaginal bacteria is reduced in the setting of bacterial vaginosis (BV) and preferentially targets BV-associated species.	Murphy K, Gromisch M, Srinivasan S, Wang T, Wood L, Proll S, Liu C, Fiedler T, Valint DJ, Fredricks DN, Keller MJ, Herold BC.	Infect Immun	10.1128/iai.00373-23	2024
Phylogeny	Integrated analysis reveals important differences in the gut and oropharyngeal microbiota between children with mild and severe hand, foot, and mouth disease.	Zhang N, Mou D, Li T, Chen Z, Ma C, Liang L, He Q.	Emerg Microbes Infect	10.1080/22221751.2023.2192819	2023
	Beyond bacterial vaginosis: vaginal lactobacilli and HIV risk.	Armstrong E, Kaul R.	Microbiome	10.1186/s40168-021-01183-x	2021
	Influence of Biofilm Formation by Gardnerella vaginalis and Other Anaerobes on Bacterial Vaginosis.	Machado A, Cerca N.	J Infect Dis	10.1093/infdis/jiv338	2015
Metabolism	Interleukin-36gamma Is Elevated in Cervicovaginal Epithelial Cells in Women With Bacterial Vaginosis and In Vitro After Infection With Microbes Associated With Bacterial Vaginosis.	Gardner JK, Laniewski P, Knight A, Haddad LB, Swaims-Kohlmeier A, Herbst-Kralovetz MM.	J Infect Dis	10.1093/infdis/jiz514	2020
	Microbiological, Clinical and Radiological Aspects of Diabetic Foot Ulcers Infected with Methicillin-Resistant and -Sensitive Staphylococcus aureus.	Stankowska M, Garbacz K, Korzon-Burakowska A, Bronk M, Skotarczak M, Szymanska-Dubowik A.	Pathogens	10.3390/pathogens11060701	2022
	Combined effect of diet and cervical microbiome on the risk of cervical intraepithelial neoplasia.	Seo SS, Oh HY, Lee JK, Kong JS, Lee DO, Kim MK.	Clin Nutr	10.1016/j.clnu.2016.03.019	2016
	Oral and anal microbiome from HIV-exposed individuals: role of host-associated factors in taxa composition and metabolic pathways.	Lacunza E, Fink V, Salas ME, Canzoneri R, Naipauer J, Williams S, Coso O, Sued O, Cahn P, Mesri EA, Abba MC.	NPJ Biofilms Microbiomes	10.1038/s41522-023-00413-4	2023
	Evaluation of different culture media to support in vitro growth and biofilm formation of bacterial vaginosis-associated anaerobes.	Rosca AS, Castro J, Cerca N.	PeerJ	10.7717/peerj.9917	2020
	Host-vaginal microbiota interactions in the pathogenesis of bacterial vaginosis.	Muzny CA, Laniewski P, Schwebke JR, Herbst-Kralovetz MM.	Curr Opin Infect Dis	10.1097/qco.0000000000000620	2020
	In Vitro Activity of Tedizolid Compared to Linezolid and Five Other Antimicrobial Agents against 332 Anaerobic Isolates, Including Bacteroides fragilis Group, Prevotella, Porphyromonas, and Veillonella Species.	Goldstein EJC, Merriam CV, Citron DM.	Antimicrob Agents Chemother	10.1128/aac.01088-20	2020
Transcriptome	Vaginal metatranscriptome meta-analysis reveals functional BV subgroups and novel colonisation strategies.	Dos Santos SJ, Copeland C, Macklaim JM, Reid G, Gloor GB.	Microbiome	10.1186/s40168-024-01992-w	2024
	Lemierre's syndrome or re-emerging disease: Case report and literature review.	Chaker K, Berrada O, Lyoubi M, Oukessou Y, Abada RA, Rouadi S, Roubal M, Mahtar M.	Int J Surg Case Rep	10.1016/j.ijscr.2020.12.015	2021
	Effects of Mixed Nut Consumption on Blood Glucose, Insulin, Satiety, and the Microbiome in a Healthy Population: A Pilot Study.	Rosas M, Liu C, Hong MY.	J Med Food	10.1089/jmf.2022.0121	2023
	Corynebacterium Total Hip and Knee Arthroplasy Prosthetic Joint Infections.	Hernandez NM, Buchanan MW, Cullen MM, Crook BS, Bolognesi MP, Seidelman J, Jiranek WA.	Arthroplast Today	10.1016/j.artd.2020.03.008	2020
	Sexual behavior shapes male genitourinary microbiome composition.	Toh E, Xing Y, Gao X, Jordan SJ, Batteiger TA, Batteiger BE, Van Der Pol B, Muzny CA, Gebregziabher N, Williams JA, Fortenberry LJ, Fortenberry JD, Dong Q, Nelson DE.	Cell Rep Med	10.1016/j.xcrm.2023.100981	2023
	Potential of Molecular Culture in Early Onset Neonatal Sepsis Diagnosis: A Proof of Principle Study.	Dierikx T, Budding A, Bos M, van Laerhoven H, van der Schoor S, Niemarkt H, Benninga M, van Kaam A, Visser D, de Meij T.	Microorganisms	10.3390/microorganisms11040960	2023
	Penile bacteria associated with HIV seroconversion, inflammation, and immune cells.	Prodger JL, Abraham AG, Tobian AA, Park DE, Aziz M, Roach K, Gray RH, Buchanan L, Kigozi G, Galiwango RM, Ssekasanvu J, Nnamutete J, Kagaayi J, Kaul R, Liu CM.	JCI Insight	10.1172/jci.insight.147363	2021
	Revealing In Silico that Bacteria's Outer Membrane Proteins may Help our Bodies Replicate and Carry Severe Acute Respiratory Syndrome Coronavirus 2.	Aktas E, Ozdemir Ozgenturk N.	Bioinform Biol Insights	10.1177/11779322221116320	2022
Genetics	Integrating metagenomics and metabolomics to study the gut microbiome and host relationships in sports across different energy systems.	Aya V, Pardo-Rodriguez D, Vega LC, Cala MP, Ramirez JD.	Sci Rep	10.1038/s41598-025-98973-2	2025
	Pilonidal Abscess Associated With Primary Actinomycosis.	Oh HB, Abdul Malik MH, Keh CH.	Ann Coloproctol	10.3393/ac.2015.31.6.243	2015
Phylogeny	Simultaneous monitoring of SARS-CoV-2 and bacterial profiles from the air of hospital environments with COVID-19-affected patients.	Perrone MR, Romano S, De Maria G, Tundo P, Bruno AR, Tagliaferro L, Maffia M, Fragola M.	Aerobiologia (Bologna)	10.1007/s10453-022-09754-7	2022
	VagiBIOM Lactobacillus suppository improves vaginal health index in perimenopausal women with bacterial vaginosis: a randomized control trial.	Vivekanandan V, Khan ZH, Venugopal G, Musunuru B, Mishra P, Srivastava S, Ramadass B, Subhadra B.	Sci Rep	10.1038/s41598-024-53770-1	2024
	Dysbiosis of vaginal and cervical microbiome is associated with uterine fibroids.	Mao X, Chen H, Peng X, Zhao X, Yu Z, Xu D.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1196823	2023
Genetics	Unraveling the impact of host genetics and factors on the urinary microbiome in a young population.	Zou L, Zhang Z, Chen J, Guo R, Tong X, Ju Y, Lu H, Yang H, Wang J, Zong Y, Xu X, Jin X, Xiao L, Jia H, Zhang T, Liu X.	mBio	10.1128/mbio.02773-24	2024
	Protozoan-Viral-Bacterial Co-Infections Alter Galectin Levels and Associated Immunity Mediators in the Female Genital Tract.	Fichorova RN, DeLong AK, Cu-Uvin S, King CC, Jamieson DJ, Klein RS, Sobel JD, Vlahov D, Yamamoto HS, Mayer KH.	Front Cell Infect Microbiol	10.3389/fcimb.2021.649940	2021
	Glycoengineering with neuraminic acid analogs to label lipooligosaccharides and detect native sialyltransferase activity in gram-negative bacteria.	Alvarado-Melendez EI, de Jong H, Hartman JEM, Ong JY, Wosten MMSM, Wennekes T.	Glycobiology	10.1093/glycob/cwae071	2024
	Ethnic disparity in diagnosing asymptomatic bacterial vaginosis using machine learning.	Celeste C, Ming D, Broce J, Ojo DP, Drobina E, Louis-Jacques AF, Gilbert JE, Fang R, Parker IK.	NPJ Digit Med	10.1038/s41746-023-00953-1	2023
Enzymology	Abdominal wall phlebitis due to Prevotella bivia following renal transplantation in a patient with an occluded inferior vena cava.	Janssen S, van Donselaar-van der Pant KA, van der Weerd NC, Develter W, Bemelman FJ, Grobusch MP, Idu MM, Ten Berge IJ.	Infection	10.1007/s15010-012-0335-5	2013
Pathogenicity	Bacteria in the vaginal microbiome alter the innate immune response and barrier properties of the human vaginal epithelia in a species-specific manner.	Doerflinger SY, Throop AL, Herbst-Kralovetz MM.	J Infect Dis	10.1093/infdis/jiu004	2014
	Endometriosis specific vaginal microbiota links to urine and serum N-glycome.	MacSharry J, Kovacs Z, Xie Y, Adamczyk B, Walsh C, Reidy F, McAuliffe FM, Kilbane MT, Twomey PJ, Rudd PM, Wingfield M, Butler M, van Sinderen D, Glover L, Saldova R.	Sci Rep	10.1038/s41598-024-76125-2	2024
	Vaginal and Cervical Microbiota Composition in Patients with Endometrial Cancer.	Barczynski B, Fraszczak K, Grywalska E, Kotarski J, Korona-Glowniak I.	Int J Mol Sci	10.3390/ijms24098266	2023
	Microbial levels on street foods and food preparation surfaces in Mangaung Metropolitan Municipality.	Moloi M, Lenetha GG, Malebo NJ.	Health SA	10.4102/hsag.v26i0.1407	2021
	Microbiological and Cytokine Profiling of Menstrual Blood for the Assessment of Endometrial Receptivity: A Pilot Study.	Jain M, Mladova E, Shichanina A, Kirillova K, Povarova A, Scherbakova L, Samokhodskaya L, Panina O.	Biomedicines	10.3390/biomedicines11051284	2023
	Inguinal syndrome secondary to Prevotella bivia after accidental bite in orogenital sex.	Sagrista M, Martin-Ezquerra G, Gallardo F, Membrilla E, Salazar AJ, Salvado M, Gomez J, Pujol RM.	Sex Transm Infect	10.1136/sextrans-2011-050348	2012
	Gut microbiome dynamics and predictive value in hospitalized COVID-19 patients: a comparative analysis of shallow and deep shotgun sequencing.	Kopera K, Gromowski T, Wydmanski W, Skonieczna-Zydecka K, Muszynska A, Zielinska K, Wierzbicka-Wos A, Kaczmarczyk M, Kadaj-Lipka R, Cembrowska-Lech D, Januszkiewicz K, Kotfis K, Witkiewicz W, Nalewajska M, Feret W, Marlicz W, Loniewski I, Labaj PP, Rydzewska G, Kosciolek T.	Front Microbiol	10.3389/fmicb.2024.1342749	2024
	Vaginal Microbiota and Cytokine Microenvironment in HPV Clearance/Persistence in Women Surgically Treated for Cervical Intraepithelial Neoplasia: An Observational Prospective Study.	Caselli E, D'Accolti M, Santi E, Soffritti I, Conzadori S, Mazzacane S, Greco P, Contini C, Bonaccorsi G.	Front Cell Infect Microbiol	10.3389/fcimb.2020.540900	2020
Pathogenicity	Antimicrobial resistance among anaerobes isolated from clinical specimens in Kuwait hospitals: comparative analysis of 11-year data.	Jamal W, Al Hashem G, Rotimi VO.	Anaerobe	10.1016/j.anaerobe.2014.08.012	2015
	Vaginal Microbiome Research Consortium for Africa: study protocol of a multicentre prospective clinical study to evaluate temporal vaginal microbial composition associated with maintenance of reproductive health in women in South Africa and Kenya.	Kullin BR, Gitome S, Happel AU, Pidwell T, Lefevre M, Madikida A, Wekesa P, Mahlangu K, Ochieng J, Awili L, Agolla W, Otieno R, Mutharimi A, Ganief Y, Daniels R, Chicken A, Welp K, Livingstone H, Swanepoel C, Claassen-Weitz S, Kanyoka P, Ravel J, Humphrys M, Bilski L, Mulder N, Bekker LG, Gill K, Jaspan H, Bukusi EA, Passmore JS.	BMJ Open	10.1136/bmjopen-2024-090938	2025
	Immunomodulatory Effects of Probiotics on COVID-19 Infection by Targeting the Gut-Lung Axis Microbial Cross-Talk.	Synodinou KD, Nikolaki MD, Triantafyllou K, Kasti AN.	Microorganisms	10.3390/microorganisms10091764	2022
Pathogenicity	The vaginal microbiota of women living with HIV on suppressive antiretroviral therapy and its relation to high-risk human papillomavirus infection.	Chavez-Torres M, Gomez-Palacio-Schjetnan M, Reyes-Teran G, Briceno O, Avila-Rios S, Romero-Mora KA, Pinto-Cardoso S.	BMC Microbiol	10.1186/s12866-023-02769-1	2023
	Engineered Phage Endolysin Eliminates Gardnerella Biofilm without Damaging Beneficial Bacteria in Bacterial Vaginosis Ex Vivo.	Landlinger C, Tisakova L, Oberbauer V, Schwebs T, Muhammad A, Latka A, Van Simaey L, Vaneechoutte M, Guschin A, Resch G, Swidsinski S, Swidsinski A, Corsini L.	Pathogens	10.3390/pathogens10010054	2021
	Inhibition of colorectal cancer in Alzheimer's disease is mediated by gut microbiota via induction of inflammatory tolerance.	Zhang N, Zhang R, Jiang L, Gao Z, Xia W, Ma X, Qin Y, Zhang D, Li J, Tian P, Zhang Q, Wang W, Zhang K, Xu S, Zhao N, Xu S.	Proc Natl Acad Sci U S A	10.1073/pnas.2314337121	2024
	Intramedullary abscess at thoracolumbar region transmitted from infected dermal sinus and dermoid through retained medullary cord.	Matsubara Y, Murakami N, Kurogi A, Lee S, Mukae N, Shimogawa T, Shono T, Suzuki SO, Yoshimoto K, Morioka T.	Surg Neurol Int	10.25259/sni_1197_2021	2022
Genetics	Gut microbiota associated with cryptococcal meningitis and dysbiosis caused by anti-fungal treatment.	Li H, Zhang L, Zhang K, Huang Y, Liu Y, Lu X, Liao W, Liu X, Zhang Q, Pan W.	Front Microbiol	10.3389/fmicb.2022.1086239	2022
	In vitro co-culture model of Trichomonas vaginalis, Candida albicans, and Lactobacillus crispatus: a system for assessing antimicrobial activity and microorganism interactions in vaginitis.	Cardoso FG, Dos Santos LT, Menezes SA, Rigo GV, Tasca T.	Front Parasitol	10.3389/fpara.2025.1523113	2025
	Microbiota Ecosystem in Recurrent Cystitis and the Immunological Microenvironment of Urothelium.	Dominoni M, Scatigno AL, La Verde M, Bogliolo S, Melito C, Gritti A, Pasquali MF, Torella M, Gardella B.	Healthcare (Basel)	10.3390/healthcare11040525	2023
Enzymology	Association Between Vaginal Bacterial Microbiota and Vaginal Yeast Colonization.	Eastment MC, Balkus JE, Richardson BA, Srinivasan S, Kimani J, Anzala O, Schwebke J, Fiedler TL, Fredricks DN, McClelland RS.	J Infect Dis	10.1093/infdis/jiaa459	2021
	Understanding and Preventing Recurring Bacterial Vaginosis: Important Considerations for Clinicians.	Muzny CA, Sobel JD.	Int J Womens Health	10.2147/ijwh.s383333	2023
	Fluorescent angiography used as a tool to guide angiosome-directed endovascular therapy for diabetic foot ulcers.	Dworak M, Andraska EA, Gharacholou SM, Myers M, Chapman SC.	J Vasc Surg Cases Innov Tech	10.1016/j.jvscit.2020.10.014	2021
	Determination of the Optimal Bacterial DNA Extraction Method to Explore the Urinary Microbiota.	Vendrell JA, Henry S, Cabello-Aguilar S, Heckendorn E, Godreuil S, Solassol J.	Int J Mol Sci	10.3390/ijms23031336	2022
	Ureaplasma and Prevotella colonization with Lactobacillus abundance during pregnancy facilitates term birth.	Park S, You YA, Kim YH, Kwon E, Ansari A, Kim SM, Lee G, Hur YM, Jung YJ, Kim K, Kim YJ.	Sci Rep	10.1038/s41598-022-13871-1	2022
	The Vaginal Community State Types Microbiome-Immune Network as Key Factor for Bacterial Vaginosis and Aerobic Vaginitis.	De Seta F, Campisciano G, Zanotta N, Ricci G, Comar M.	Front Microbiol	10.3389/fmicb.2019.02451	2019
Genetics	Direct metagenomics investigation of non-surgical hard-to-heal wounds: a review.	Morsli M, Salipante F, Magnan C, Dunyach-Remy C, Sotto A, Lavigne JP.	Ann Clin Microbiol Antimicrob	10.1186/s12941-024-00698-z	2024
Phylogeny	Detection of Pathogenic Bacteria From Septic Patients Using 16S Ribosomal RNA Gene-Targeted Metagenomic Sequencing.	Fida M, Wolf MJ, Hamdi A, Vijayvargiya P, Esquer Garrigos Z, Khalil S, Greenwood-Quaintance KE, Thoendel MJ, Patel R.	Clin Infect Dis	10.1093/cid/ciab349	2021
	Laparoscopic Surgery for Ovarian Cyst Infection with Avoidance of Ureteral Injury and Uterine Perforation following Intrauterine Insemination after Abdominal Modified Radical Trachelectomy.	Iijima M, Hayashi S, Kobayashi Y, Tsuji K, Tominaga E, Banno K, Aoki D.	Case Rep Obstet Gynecol	10.1155/2019/8607417	2019
	The intratumour microbiota and neutrophilic inflammation in squamous cell vulvar carcinoma microenvironment.	Rustetska N, Szczepaniak M, Goryca K, Bakula-Zalewska E, Figat M, Kowalik A, Gozdz S, Kowalewska M.	J Transl Med	10.1186/s12967-023-04113-7	2023
Enzymology	Empyema caused by Prevotella bivia complicating an unusual case of spontaneous chylothorax.	Di Marco Berardino A, Inchingolo R, Smargiassi A, Re A, Torelli R, Fiori B, d'Inzeo T, Corbo GM, Valente S, Sanguinetti M, Spanu T.	J Clin Microbiol	10.1128/jcm.03282-13	2014
	Efficacy and safety of intravenous azithromycin followed by oral azithromycin for the treatment of acute pelvic inflammatory disease and perihepatitis in Japanese women.	Mikamo H, Iwasaku K, Yamagishi Y, Matsumizu M, Nagashima M.	J Infect Chemother	10.1016/j.jiac.2014.04.001	2014
	The causal role of intestinal microbiome in development of pre-eclampsia.	Xiong Z, Wang Q, Pei S, Zhu Z.	Funct Integr Genomics	10.1007/s10142-023-01054-8	2023
Phylogeny	Characteristics of the Cervicovaginal Microenvironment in Childbearing-Age Women with Different Degrees of Cervical Lesions and HR-HPV Positivity.	Zhai Q, Zhang W, Zhang Z, Fu Y, Li Y, Wang X, Li L, Meng Y.	Pol J Microbiol	10.33073/pjm-2021-046	2021
Pathogenicity	Engineered Tissue Models to Decode Host-Microbiota Interactions.	Adelfio M, Callen GE, He X, Paster BJ, Hasturk H, Ghezzi CE.	Adv Sci (Weinh)	10.1002/advs.202417687	2025
	Under conditions closely mimicking vaginal fluid, Lactobacillus jensenii strain 62B produces a bacteriocin-like inhibitory substance that targets and eliminates Gardnerella species.	Navarro S, Abla H, Colmer-Hamood JA, Ventolini G, Hamood AN.	Microbiology (Reading)	10.1099/mic.0.001409	2023
Phylogeny	Accurate 16S Absolute Quantification Sequencing Revealed Vaginal Microecological Composition and Dynamics During Mixed Vaginitis Treatment With Fufang FuRong Effervescent Suppository.	Li M, Zeng Z, Feng H, Cao Y, Zhang Q, Lv T, Yang X, Song D, Li P, Hu L, Fan S, An R, Zhang B, Zhang L, Liao Q.	Front Cell Infect Microbiol	10.3389/fcimb.2022.883798	2022
	Lactobacillus helveticus HY7801 ameliorates bacterial vaginosis by inhibiting biofilm formation and epithelial cell adhesion of Gardnerella vaginalis.	Kim JY, Moon EC, Kim JY, Kim HJ, Heo K, Shim JJ, Lee JL.	Food Sci Biotechnol	10.1007/s10068-022-01208-7	2023
	Screening Pregnant Women for Bacterial Vaginosis Using a Point-of-Care Test: A Prospective Validation Study.	Foessleitner P, Kiss H, Deinsberger J, Ott J, Zierhut L, Rosta K, Falcone V, Farr A.	J Clin Med	10.3390/jcm10112275	2021
Pathogenicity	Temporal Changes in Vaginal Microbiota and Genital Tract Cytokines Among South African Women Treated for Bacterial Vaginosis.	Mtshali A, San JE, Osman F, Garrett N, Balle C, Giandhari J, Onywera H, Mngomezulu K, Mzobe G, de Oliveira T, Rompalo A, Mindel A, Abdool Karim SS, Ravel J, Passmore JS, Abdool Karim Q, Jaspan HB, Liebenberg LJP, Ngcapu S.	Front Immunol	10.3389/fimmu.2021.730986	2021
Pathogenicity	Susceptibility of bacterial vaginosis (BV)-associated bacteria to secnidazole compared to metronidazole, tinidazole and clindamycin.	Petrina MAB, Cosentino LA, Rabe LK, Hillier SL.	Anaerobe	10.1016/j.anaerobe.2017.05.005	2017
	Metronidazole Treatment Failure and Persistent BV Lead to Increased Frequencies of Activated T- and Dendritic-Cell Subsets.	Qulu WP, Mzobe G, Mtshali A, Letsoalo MP, Osman F, San JE, Kama AO, Garrett N, Mindel A, Rompalo A, Liebenberg LJP, Archary D, Sivro A, Ngcapu S.	Microorganisms	10.3390/microorganisms11112643	2023
	Longitudinal analysis of vaginal microbiota during IVF fresh embryo transfer and in early pregnancy.	Vainamo S, Saqib S, Kalliala I, Kervinen K, Luiro K, Niinimaki M, Halttunen-Nieminen M, Virtanen S, Nieminen P, Salonen A, Holster T.	Microbiol Spectr	10.1128/spectrum.01650-23	2023
	The association of maternal factors with the neonatal microbiota and health.	Zhu B, Edwards DJ, Spaine KM, Edupuganti L, Matveyev A, Serrano MG, Buck GA.	Nat Commun	10.1038/s41467-024-49160-w	2024
	Vaginal, Cervical and Uterine pH in Women with Normal and Abnormal Vaginal Microbiota.	Lykke MR, Becher N, Haahr T, Boedtkjer E, Jensen JS, Uldbjerg N.	Pathogens	10.3390/pathogens10020090	2021
Enzymology	Identification of Key Bacteria Involved in the Induction of Incident Bacterial Vaginosis: A Prospective Study.	Muzny CA, Blanchard E, Taylor CM, Aaron KJ, Talluri R, Griswold ME, Redden DT, Luo M, Welsh DA, Van Der Pol WJ, Lefkowitz EJ, Martin DH, Schwebke JR.	J Infect Dis	10.1093/infdis/jiy243	2018
	Orally administrated Lactobacillus gasseri TM13 and Lactobacillus crispatus LG55 can restore the vaginal health of patients recovering from bacterial vaginosis.	Qi F, Fan S, Fang C, Ge L, Lyu J, Huang Z, Zhao S, Zou Y, Huang L, Liu X, Liang Y, Zhang Y, Zhong Y, Zhang H, Xiao L, Zhang X.	Front Immunol	10.3389/fimmu.2023.1125239	2023
	Changes in the Vaginal Microbiome During Pregnancy and the Postpartum Period in South African Women: a Longitudinal Study.	Li KT, Li F, Jaspan H, Nyemba D, Myer L, Aldrovandi G, Joseph-Davey D.	Reprod Sci	10.1007/s43032-023-01351-4	2024
	Vaginal & gut microbiota diversity in pregnant women with bacterial vaginosis & effect of oral probiotics: An exploratory study.	Vasundhara D, Raju VN, Hemalatha R, Nagpal R, Kumar M.	Indian J Med Res	10.4103/ijmr.ijmr_350_19	2021
	Comparison of Gut Microbiome in Neonates Born by Caesarean Section and Vaginal Seeding with Gut Microbiomes of Neonates Born by Caesarean Section Without Vaginal Seeding and Neonates Born by Vaginal Delivery.	Anthoulaki X, Oikonomou E, Bothou A, Papanikolopoulou S, Nikolettos K, Damaskos C, Garbis N, Kyriakou D, Nalbanti T, Iatrakis G, Nikolettos N, Tsikouras P.	Mater Sociomed	10.5455/msm.2023.35.234-243	2023
Enzymology	Septic arthritis of the knee joint secondary to Prevotella bivia.	Salman SA, Baharoon SA.	Saudi Med J		2009
Phylogeny	High-Throughput Sequencing-Based Analysis of Changes in the Vaginal Microbiome during the Disease Course of Patients with Bacterial Vaginosis: A Case-Control Study.	Gao J, Peng Y, Jiang N, Shi Y, Ying C.	Biology (Basel)	10.3390/biology11121797	2022
	Pathogenic Spectrum and Resistance Pattern of Bloodstream Infections Isolated from Postpartum Women: A Multicenter Retrospective Study.	Zou Q, Zou H, Shen Y, Yu L, Zhou W, Sheng C, Liao A, Li C.	Infect Drug Resist	10.2147/idr.s315367	2021
Transcriptome	Transcriptome and microbiome-immune changes across preinvasive and invasive anal cancer lesions.	Lacunza E, Fink V, Salas ME, Gun AM, Basiletti JA, Picconi MA, Golubicki M, Robbio J, Kujaruk M, Iseas S, Williams S, Figueroa MI, Coso O, Cahn P, Ramos JC, Abba MC.	JCI Insight	10.1172/jci.insight.180907	2024
	The safety assessment of tampons: illustration of a comprehensive approach for four different products.	Hochwalt AE, Abbinante-Nissen JM, Bohman LC, Hattersley AM, Hu P, Streicher-Scott JL, Teufel AG, Woeller KE.	Front Reprod Health	10.3389/frph.2023.1167868	2023
	Analysis of the cervical microbiome in women from the German national cervical cancer screening program.	Condic M, Neidhofer C, Ralser DJ, Wetzig N, Thiele R, Sieber M, Otten LA, Warwas LK, Hoerauf A, Mustea A, Parcina M.	J Cancer Res Clin Oncol	10.1007/s00432-023-04599-0	2023
	Impact of Intrapartum Antibiotic Prophylaxis on Offspring Microbiota.	Prescott S, Dreisbach C, Baumgartel K, Koerner R, Gyamfi A, Canellas M, St Fleur A, Henderson WA, Trinchieri G.	Front Pediatr	10.3389/fped.2021.754013	2021
Enzymology	Necrotising fasciitis due to Prevotella bivia in a cat.	Hess MO.	J Small Anim Pract	10.1111/j.1748-5827.2009.00789.x	2009
	Inflammatory cytokines and a diverse cervicovaginal microbiota associate with cervical dysplasia in a cohort of Hispanics living in Puerto Rico.	Tosado-Rodriguez E, Mendez LB, Espino AM, Dorta-Estremera S, Aquino EE, Romaguera J, Godoy-Vitorino F.	PLoS One	10.1371/journal.pone.0284673	2023
	Disclosing alpha-lactalbumin impact on the intestinal and vaginal microbiota of women suffering from polycystic ovary syndrome.	Alessandri G, Mancabelli L, Fontana F, Lepore E, Forte G, Burratti M, Ventura M, Turroni F.	Microb Biotechnol	10.1111/1751-7915.14540	2024
Genetics	Deep longitudinal lower respiratory tract microbiome profiling reveals genome-resolved functional and evolutionary dynamics in critical illness.	Cheng M, Xu Y, Cui X, Wei X, Chang Y, Xu J, Lei C, Xue L, Zheng Y, Wang Z, Huang L, Zheng M, Luo H, Leng Y, Jiang C.	Nat Commun	10.1038/s41467-024-52713-8	2024
Phylogeny	Study of the Vaginal Microbiota in Healthy Women of Reproductive Age.	Alonzo Martinez MC, Cazorla E, Canovas E, Martinez-Blanch JF, Martinez-Blanch JF, Chenoll E, Climent E, Navarro-Lopez V.	Microorganisms	10.3390/microorganisms9051069	2021
Phylogeny	Effect of metronidazole on vaginal microbiota associated with asymptomatic bacterial vaginosis.	Ruiz-Perez D, Coudray MS, Colbert B, Krupp K, Kumari H, Stebliankin V, Mathee K, Cook RL, Schwebke J, Narasimhan G, Madhivanan P.	Access Microbiol	10.1099/acmi.0.000226	2021
Phylogeny	Microbial characterization of the nasal cavity in patients with allergic rhinitis and non-allergic rhinitis.	Che Y, Wang N, Ma Q, Liu J, Xu Z, Li Q, Wang J, Sun Y.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1166389	2023
	Cooperative Interactions between Trichomonas vaginalis and Associated Bacteria Enhance Paracellular Permeability of the Cervicovaginal Epithelium by Dysregulating Tight Junctions.	Hinderfeld AS, Phukan N, Bar AK, Roberton AM, Simoes-Barbosa A.	Infect Immun	10.1128/iai.00141-19	2019
	Skin Microbiota and Clinical Associations in Netherton Syndrome.	Sillanpaa V, Soratto TAT, Eranko E, Barrientos-Somarribas M, Hannula-Jouppi K, Andersson B, Ranki A.	JID Innov	10.1016/j.xjidi.2021.100008	2021
	Insights into the assembly of the neovaginal microbiota in Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome patients.	Chen N, Hao L, Zhang Z, Qin C, Jie Z, Pan H, Duan J, Huang X, Zhang Y, Gao H, Lu R, Sun T, Yang H, Shi J, Liang M, Guo J, Gao Q, Zhao X, Dou Z, Xiao L, Zhang S, Jin X, Xu X, Yang H, Wang J, Jia H, Zhang T, Kristiansen K, Chen C, Zhu L.	Nat Commun	10.1038/s41467-024-52102-1	2024
Enzymology	Clostridium hathewayi bacteraemia and surgical site infection after uterine myomectomy.	Dababneh AS, Nagpal A, Palraj BR, Sohail MR.	BMJ Case Rep	10.1136/bcr-2013-009322	2014
	Impact of reproductive aging on the vaginal microbiome and soluble immune mediators in women living with and at-risk for HIV infection.	Murphy K, Keller MJ, Anastos K, Sinclair S, Devlin JC, Shi Q, Hoover DR, Starkman B, McGillick J, Mullis C, Minkoff H, Dominguez-Bello MG, Herold BC.	PLoS One	10.1371/journal.pone.0216049	2019
	Aerobic vaginitis in the third trimester and its impact on pregnancy outcomes.	Nguyen ATC, Le Nguyen NT, Hoang TTA, Nguyen TT, Tran TTQ, Tran DNT, Nguyen ATK, Tran LM, Nguyen DHC, Le TM, Ho BD, Roop T, Koljalg S, Stsepetova J, Van Le A, Salumets A, Mandar R.	BMC Pregnancy Childbirth	10.1186/s12884-022-04761-5	2022
	Microbial diversity in the vaginal microbiota and its link to pregnancy outcomes.	Baud A, Hillion KH, Plainvert C, Tessier V, Tazi A, Mandelbrot L, Poyart C, Kennedy SP.	Sci Rep	10.1038/s41598-023-36126-z	2023
	Pseudoaneurysm of the ascending aorta: case report of a donor-derived Pseudomonas infection in a heart transplant recipient.	Kugler S, Polos M, Kiraly A, Pataki A, Koppanyi A, Varga T, Szakal-Toth Z, Parazs N, Teszak T, Tarjanyi Z, Prinz G, Hartyanszky I, Szabolcs Z, Merkely B, Sax B.	BMC Infect Dis	10.1186/s12879-021-06557-y	2021
	Lactobacilli Infection Case Reports in the Last Three Years and Safety Implications.	Rossi F, Amadoro C, Gasperi M, Colavita G.	Nutrients	10.3390/nu14061178	2022
	Lacticaseibacillus rhamnosus Lcr35 Stimulates Epithelial Vaginal Defenses upon Gardnerella vaginalis Infection.	Miquel S, Verlaguet J, Garcin S, Bertran T, Evrard B, Forestier C, Vareille-Delarbre M.	Infect Immun	10.1128/iai.00309-22	2022
	Vitamin D deficiency increases the risk of bacterial vaginosis during pregnancy: Evidence from a meta-analysis based on observational studies.	Ma L, Zhang Z, Li L, Zhang L, Lin Z, Qin H.	Front Nutr	10.3389/fnut.2022.1016592	2022
	Vaginal Microbiota of the Sexually Transmitted Infections Caused by Chlamydia trachomatis and Trichomonas vaginalis in Women with Vaginitis in Taiwan.	Chiu SF, Huang PJ, Cheng WH, Huang CY, Chu LJ, Lee CC, Lin HC, Chen LC, Lin WN, Tsao CH, Tang P, Yeh YM, Huang KY.	Microorganisms	10.3390/microorganisms9091864	2021
	Cervicovaginal microbiota and metabolome predict preterm birth risk in an ethnically diverse cohort.	Flaviani F, Hezelgrave NL, Kanno T, Prosdocimi EM, Chin-Smith E, Ridout AE, von Maydell DK, Mistry V, Wade WG, Shennan AH, Dimitrakopoulou K, Seed PT, Mason AJ, Tribe RM.	JCI Insight	10.1172/jci.insight.149257	2021
	Group B Streptococcus and the Vaginal Microbiota.	Rosen GH, Randis TM, Desai PV, Sapra KJ, Ma B, Gajer P, Humphrys MS, Ravel J, Gelber SE, Ratner AJ.	J Infect Dis	10.1093/infdis/jix395	2017
	Vaginal Dysbiosis and Partial Bacterial Vaginosis: The Interpretation of the "Grey Zones" of Clinical Practice.	Campisciano G, Zanotta N, Petix V, Giangreco M, Ricci G, Maso G, Comar M, De Seta F.	Diagnostics (Basel)	10.3390/diagnostics11020191	2021
	Diverse Expression of Antimicrobial Activities Against Bacterial Vaginosis and Urinary Tract Infection Pathogens by Cervicovaginal Microbiota Strains of Lactobacillus gasseri and Lactobacillus crispatus.	Atassi F, Pho Viet Ahn DL, Lievin-Le Moal V.	Front Microbiol	10.3389/fmicb.2019.02900	2019
	Adherent Bacteria and Parasiticidal Secretion Products of Human Cervicovaginal Microbiota-Associated Lactobacillus gasseri Confer Non-Identical Cell Protection against Trichomonas vaginalis-Induced Cell Detachment.	Pradines B, Domenichini S, Lievin-Le Moal V.	Pharmaceuticals (Basel)	10.3390/ph15111350	2022
	Consistent signatures in the human gut microbiome of old- and young-onset colorectal cancer.	Qin Y, Tong X, Mei WJ, Cheng Y, Zou Y, Han K, Yu J, Jie Z, Zhang T, Zhu S, Jin X, Wang J, Yang H, Xu X, Zhong H, Xiao L, Ding PR.	Nat Commun	10.1038/s41467-024-47523-x	2024
Phylogeny	Probiotic Lacticaseibacillus rhamnosus GR-1 and Limosilactobacillus reuteri RC-14 as an Adjunctive Treatment for Bacterial Vaginosis Do Not Increase the Cure Rate in a Chinese Cohort: A Prospective, Parallel-Group, Randomized, Controlled Study.	Zhang Y, Lyu J, Ge L, Huang L, Peng Z, Liang Y, Zhang X, Fan S.	Front Cell Infect Microbiol	10.3389/fcimb.2021.669901	2021
	A Healthy Vaginal Microbiota Remains Stable during Oral Probiotic Supplementation: A Randomised Controlled Trial.	Lyra A, Ala-Jaakkola R, Yeung N, Datta N, Evans K, Hibberd A, Lehtinen MJ, Forssten SD, Ibarra A, Pesonen T, Junnila J, Ouwehand AC, Baranowski K, Maukonen J, Crawford G, Lehtoranta L.	Microorganisms	10.3390/microorganisms11020499	2023
Pathogenicity	Anti-anaerobic activity of serum from patients treated with tigecycline for skin/soft tissue infections.	Stein GE, Tyrrell KL, Dybas LA, Citron DM, Nicolau DP, Goldstein EJ.	Anaerobe	10.1016/j.anaerobe.2011.02.006	2011
	Lactobacilli Strain Mixture Alleviates Bacterial Vaginosis through Antibacterial and Antagonistic Activity in Gardnerella vaginalis-Infected C57BL/6 Mice.	Choi SI, Won G, Kim Y, Kang CH, Kim GH.	Microorganisms	10.3390/microorganisms10020471	2022
	Cervical dysplasia among migrant women with female genital mutilation/cutting type III: A cross-sectional study.	Frick A, Azuaga A, Abdulcadir J.	Int J Gynaecol Obstet	10.1002/ijgo.13921	2022
Enzymology	Predominance of Atopobium vaginae at Midtrimester: a Potential Indicator of Preterm Birth Risk in a Nigerian Cohort.	Odogwu NM, Chen J, Onebunne CA, Jeraldo P, Yang L, Johnson S, Ayeni FA, Walther-Antonio MRS, Olayemi OO, Chia N, Omigbodun AO.	mSphere	10.1128/msphere.01261-20	2021
	Impact of Symbiosis Between Trichomonas vaginalis and Mycoplasma hominis on Vaginal Dysbiosis: A Mini Review.	Margarita V, Fiori PL, Rappelli P.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00179	2020
	Prevotella and Gardnerella Are Associated With Treatment Failure Following First-line Antibiotics for Bacterial Vaginosis.	Plummer EL, Sfameni AM, Vodstrcil LA, Danielewski JA, Murray GL, Fehler G, Fairley CK, Garland SM, Chow EPF, Hocking JS, Bradshaw CS.	J Infect Dis	10.1093/infdis/jiad261	2023
	Effects of wearing personal protective equipment during COVID-19 pandemic on composition and diversity of skin bacteria and fungi of medical workers.	Lin X, Li YZ, Chen T, Min SH, Wang DF, Ding MM, Jiang G.	J Eur Acad Dermatol Venereol	10.1111/jdv.18216	2022
	Sub-communities of the vaginal microbiota in pregnant and non-pregnant women.	Symul L, Jeganathan P, Costello EK, France M, Bloom SM, Kwon DS, Ravel J, Relman DA, Holmes S.	Proc Biol Sci	10.1098/rspb.2023.1461	2023
	Clinical, microbiological and oxidative stress evaluation of periodontitis patients treated with two regimens of systemic antibiotics, adjunctive to non-surgical therapy: A placebo-controlled randomized clinical trial.	Boia S, Boariu M, Baderca F, Rusu D, Muntean D, Horhat F, Boia ER, Borza C, Anghel A, Stratul SI.	Exp Ther Med	10.3892/etm.2019.7856	2019
	A cross-sectional pilot study of birth mode and vaginal microbiota in reproductive-age women.	Stennett CA, Dyer TV, He X, Robinson CK, Ravel J, Ghanem KG, Brotman RM.	PLoS One	10.1371/journal.pone.0228574	2020
	Development of a New Biomarker Model for Predicting Preterm Birth in Cervicovaginal Fluid.	Lee JY, Seo S, Shin B, Hong SH, Kwon E, Park S, Hur YM, Lee DK, Kim YJ, Han SB.	Metabolites	10.3390/metabo12080734	2022
	A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women.	Xu X, Zhang Y, Yu L, Shi X, Min M, Xiong L, Pan J, Liu P, Wu G, Gao G.	Sci Rep	10.1038/s41598-022-10532-1	2022
	Screening for Vaginal and Endocervical Infections in the First Trimester of Pregnancy? A Study That Ignites an Old Debate.	Toboso Silgo L, Cruz-Melguizo S, de la Cruz Conty ML, Encinas Pardilla MB, Munoz Algarra M, Nieto Jimenez Y, Arranz Friediger A, Martinez-Perez O.	Pathogens	10.3390/pathogens10121610	2021
Pathogenicity	Ceftaroline plus avibactam demonstrates bactericidal activity against pathogenic anaerobic bacteria in a one-compartment in vitro pharmacokinetic/pharmacodynamic model.	Werth BJ, Rybak MJ.	Antimicrob Agents Chemother	10.1128/aac.01358-13	2014
	The Vaginal Microbiota Among Adolescent Girls in Tanzania Around the Time of Sexual Debut.	Francis SC, Crucitti T, Smekens T, Hansen CH, Andreasen A, Jespers V, Hardy L, Irani J, Changalucha J, Baisley K, Hayes R, Watson-Jones D, Buve A.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00305	2020
Metabolism	Amniotic fluid interleukin-1 beta and interleukin-6, but not interleukin-8 correlate with microbial invasion of the amniotic cavity in preterm labor.	Marconi C, de Andrade Ramos BR, Peracoli JC, Donders GG, da Silva MG.	Am J Reprod Immunol	10.1111/j.1600-0897.2010.00940.x	2011
	Translocation of vaginal microbiota is involved in impairment and protection of uterine health.	Wang J, Li Z, Ma X, Du L, Jia Z, Cui X, Yu L, Yang J, Xiao L, Zhang B, Fan H, Zhao F.	Nat Commun	10.1038/s41467-021-24516-8	2021
	Surgical Site Infections Complicating the Use of Negative Pressure Wound Therapy in Renal Transplant Recipients.	Lam S, Lau NS, Laurence JM, Verran DJ.	Case Rep Transplant	10.1155/2019/2452857	2019
Phenotype	Associations Between Dysmenorrhea Symptom-Based Phenotypes and Vaginal Microbiome: A Pilot Study.	Chen CX, Carpenter JS, Gao X, Toh E, Dong Q, Nelson DE, Mitchell C, Fortenberry JD.	Nurs Res	10.1097/nnr.0000000000000510	2021
Phylogeny	Roles of vaginal flora in human papillomavirus infection, virus persistence and clearance.	Zeng M, Li X, Jiao X, Cai X, Yao F, Xu S, Huang X, Zhang Q, Chen J.	Front Cell Infect Microbiol	10.3389/fcimb.2022.1036869	2022
	Composition of Vaginal Microbiota in Pregnant Women With Aerobic Vaginitis.	Oh KY, Lee S, Lee MS, Lee MJ, Shim E, Hwang YH, Ha JG, Yang YS, Hwang IT, Park JS.	Front Cell Infect Microbiol	10.3389/fcimb.2021.677648	2021
	Aerobic Vaginitis-Underestimated Risk Factor for Cervical Intraepithelial Neoplasia.	Plisko O, Zodzika J, Jermakova I, Pcolkina K, Prusakevica A, Liepniece-Karele I, Donders GGG, Rezeberga D.	Diagnostics (Basel)	10.3390/diagnostics11010097	2021
	Antimicrobial Susceptibility Testing of Metronidazole and Clindamycin against Gardnerella vaginalis in Planktonic and Biofilm Formation.	Li T, Zhang Z, Wang F, He Y, Zong X, Bai H, Liu Z.	Can J Infect Dis Med Microbiol	10.1155/2020/1361825	2020
	Plasma and urine proteomics and gut microbiota analysis reveal potential factors affecting COVID-19 vaccination response.	Hu C, Hu W, Tang B, Bao Q, Jiang X, Tang L, Wang H, He L, Lv M, Xiao Y, Liu C, Li X, Liu Y, Li J, Huang G, Dong Z, Li Z, Guo T, Yang S.	iScience	10.1016/j.isci.2024.108851	2024
	Machine learning aided construction of the quorum sensing communication network for human gut microbiota.	Wu S, Feng J, Liu C, Wu H, Qiu Z, Ge J, Sun S, Hong X, Li Y, Wang X, Yang A, Guo F, Qiao J.	Nat Commun	10.1038/s41467-022-30741-6	2022
	Biogenic amine tryptamine in human vaginal probiotic isolates mediates matrix inhibition and thwarts uropathogenic E. coli biofilm.	Nair VG, Srinandan CS, Rajesh YBRD, Narbhavi D, Anupriya A, Prabhusaran N, Nagarajan S.	Sci Rep	10.1038/s41598-024-65780-0	2024
	Alterations and Prediction of Functional Profiles of Gut Microbiota After Fecal Microbiota Transplantation for Iranian Recurrent Clostridioides difficile Infection with Underlying Inflammatory Bowel Disease: A Pilot Study.	Azimirad M, Jo Y, Kim MS, Jeong M, Shahrokh S, Asadzadeh Aghdaei H, Zali MR, Lee S, Yadegar A, Shin JH.	J Inflamm Res	10.2147/jir.s338212	2022
Metabolism	Lactobacillus strains isolated from the vaginal microbiota of healthy women inhibit Prevotella bivia and Gardnerella vaginalis in coculture and cell culture.	Atassi F, Brassart D, Grob P, Graf F, Servin AL.	FEMS Immunol Med Microbiol	10.1111/j.1574-695x.2006.00162.x	2006
	Bacterial Vaginosis and Sexually Transmitted Infections in an HIV-Positive Cohort.	Nava-Memije K, Hernandez-Cortez C, Ruiz-Gonzalez V, Saldana-Juarez CA, Medina-Islas Y, Duenas-Dominguez RA, Aguilera-Arreola MG.	Front Reprod Health	10.3389/frph.2021.660672	2021
	Advanced Organotypic In Vitro Model Systems for Host-Microbial Coculture.	Kim R.	Biochip J	10.1007/s13206-023-00103-5	2023
	Human vaginal microbiota colonization is regulated by female sex hormones in a mouse model.	Rahman N, Mian MF, Nazli A, Kaushic C.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1307451	2023
	Prevotella bivia can invade human cervix epithelial (HeLa) cells.	Strombeck L, Sandros J, Holst E, Madianos P, Nannmark U, Papapanou P, Mattsby-Baltzer I.	APMIS	10.1111/j.1600-0463.2007.apm_512.x	2007
	Decreased diversity of salivary microbiome in patients with stable decompensated cirrhosis.	Oikonomou T, Cholongitas E, Gioula G, Minti F, Melidou A, Protonotariou E, Akriviadis E, Goulis I.	Hippokratia		2020
	N-glycosylation of cervicovaginal fluid reflects microbial community, immune activity, and pregnancy status.	Wu G, Grassi P, MacIntyre DA, Molina BG, Sykes L, Kundu S, Hsiao CT, Khoo KH, Bennett PR, Dell A, Haslam SM.	Sci Rep	10.1038/s41598-022-20608-7	2022
	Tannerella forsythia and Pseudomonas aeruginosa in subgingival bacterial samples from parous women.	Persson GR, Hitti J, Paul K, Hirschi R, Weibel M, Rothen M, Persson RE.	J Periodontol	10.1902/jop.2008.070350	2008
	Diagnosis and Management of Cervicofacial Actinomycosis: Lessons from Two Distinct Clinical Cases.	Stajer A, Ibrahim B, Gajdacs M, Urban E, Barath Z.	Antibiotics (Basel)	10.3390/antibiotics9040139	2020
	Gardnerella vaginalis as a Cause of Bacterial Vaginosis: Appraisal of the Evidence From in vivo Models.	Morrill S, Gilbert NM, Lewis AL.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00168	2020
	Changes in Gut Microorganism in Patients with Positive Immune Antibody-Associated Recurrent Abortion.	Jin M, Li D, Ji R, Liu W, Xu X, Feng X.	Biomed Res Int	10.1155/2020/4673250	2020
Enzymology	Prevotella bivia necrobacillosis following infectious mononucleosis.	Huits RM, van Assen S, Wildeboer-Veloo AC, Verschuuren EA, Koeter GH.	J Infect	10.1016/j.jinf.2005.10.016	2006
	Vaginal Microbiota Changes Caused by HPV Infection in Chinese Women.	Zhang Y, Xu X, Yu L, Shi X, Min M, Xiong L, Pan J, Zhang Y, Liu P, Wu G, Gao G.	Front Cell Infect Microbiol	10.3389/fcimb.2022.814668	2022
	Deciphering the Role of Mucosal Immune Responses and the Cervicovaginal Microbiome in Resistance to HIV Infection in HIV-Exposed Seronegative (HESN) Women.	Munusamy Ponnan S, Thiruvengadam K, Tellapragada C, Ambikan AT, Narayanan A, Kathirvel S, Mathayan M, Shankar J, Rajaraman A, Afshan Amanulla M, Dinesha TR, Poongulali S, Saravanan S, Murugavel KG, Swaminathan S, Velu V, Shacklett B, Neogi U, Hanna LE.	Microbiol Spectr	10.1128/spectrum.00470-21	2021
Pathogenicity	Surveillance and trends of antimicrobial resistance among clinical isolates of anaerobes in Kuwait hospitals from 2002 to 2007.	Jamal W, Shahin M, Rotimi VO.	Anaerobe	10.1016/j.anaerobe.2009.04.004	2010
Metabolism	In vitro inhibitory activity of human vaginal lactobacilli against pathogenic bacteria associated with bacterial vaginosis in Kenyan women.	Matu MN, Orinda GO, Njagi EN, Cohen CR, Bukusi EA.	Anaerobe	10.1016/j.anaerobe.2009.11.002	2010
	In vitro activities of tinidazole and metronidazole against Clostridium difficile, Prevotella bivia and Bacteroides fragilis.	Citron DM, Tyrrell KL, Warren YA, Fernandez H, Merriam CV, Goldstein EJ.	Anaerobe	10.1016/j.anaerobe.2005.04.005	2005
	Deep metagenomic characterization of gut microbial community and function in preeclampsia.	Lv LJ, Li SH, Wen JY, Wang GY, Li H, He TW, Lv QB, Xiao MC, Duan HL, Chen MC, Yi ZT, Yan QL, Yin AH.	Front Cell Infect Microbiol	10.3389/fcimb.2022.933523	2022
Phylogeny	Gardnerella diversity and ecology in pregnancy and preterm birth.	Berman HL, Goltsman DSA, Anderson M, Relman DA, Callahan BJ.	mSystems	10.1128/msystems.01339-23	2024
Phylogeny	Prospective Study of the Detection of Bacterial Pathogens in Pediatric Clinical Specimens Using the Melting Temperature Mapping Method.	Uejima Y, Suganuma E, Ohnishi T, Takei H, Furuichi M, Sato S, Kawano Y, Kitajima I, Niimi H.	Microbiol Spectr	10.1128/spectrum.00198-22	2022
	Association of Cervical Dysbacteriosis, HPV Oncogene Expression, and Cervical Lesion Progression.	Liu H, Liang H, Li D, Wang M, Li Y.	Microbiol Spectr	10.1128/spectrum.00151-22	2022
	Multi-omics data integration reveals metabolome as the top predictor of the cervicovaginal microenvironment.	Bokulich NA, Laniewski P, Adamov A, Chase DM, Caporaso JG, Herbst-Kralovetz MM.	PLoS Comput Biol	10.1371/journal.pcbi.1009876	2022
	The microbiota of pregnant women with SARS-CoV-2 and their infants.	Leftwich HK, Vargas-Robles D, Rojas-Correa M, Yap YR, Bhattarai S, Ward DV, Fujimori G, Forconi CS, Yeboah T, Carter A, Kastrinakis A, Asirwatham AM, Bucci V, Moormann AM, Maldonado-Contreras A.	Microbiome	10.1186/s40168-023-01577-z	2023
	Crosstalk between Body Microbiota and the Regulation of Immunity.	Rojas C, Galvez-Jiron F, De Solminihac J, Padilla C, Carcamo I, Villalon N, Kurte M, Pino-Lagos K.	J Immunol Res	10.1155/2022/6274265	2022
	Safety assessment scheme for menstrual cups and application for the evaluation of a menstrual cup comprised of medical grade silicone.	Sica VP, Friberg MA, Teufel AG, Streicher-Scott JL, Hu P, Sauer UG, Krivos KL, Price JM, Baker TR, Abbinante-Nissen JM, Woeller KE.	EBioMedicine	10.1016/j.ebiom.2022.104339	2022
	Optimization of Streptococcus agalactiae Biofilm Culture in a Continuous Flow System for Photoinactivation Studies.	Pieranski MK, Rychlowski M, Grinholc M.	Pathogens	10.3390/pathogens10091212	2021
	Distinct Effects of the Cervicovaginal Microbiota and Herpes Simplex Type 2 Infection on Female Genital Tract Immunology.	Shannon B, Gajer P, Yi TJ, Ma B, Humphrys MS, Thomas-Pavanel J, Chieza L, Janakiram P, Saunders M, Tharao W, Huibner S, Shahabi K, Ravel J, Kaul R.	J Infect Dis	10.1093/infdis/jix088	2017
	Penile Abscess: A Case Report and Review of Literature.	Garcia C, Winter M, Chalasani V, Dean T.	Urol Case Rep	10.1016/j.eucr.2013.12.002	2014
Phylogeny	Microbiological findings in subjects with asymptomatic oral lichen planus: a cross-sectional comparative study.	Bornstein MM, Hakimi B, Persson GR.	J Periodontol	10.1902/jop.2008.080303	2008
Enzymology	Chest wall abscess due to Prevotella bivia.	Hsu GJ, Chen CR, Lai MC, Luh SP.	J Zhejiang Univ Sci B	10.1631/jzus.b0820289	2009
	Super-taxon in human microbiome are identified to be associated with colorectal cancer.	Dai W, Li C, Li T, Hu J, Zhang H.	BMC Bioinformatics	10.1186/s12859-022-04786-9	2022
	The characteristics and risk factors of human papillomavirus infection: an outpatient population-based study in Changsha, Hunan.	Gao B, Liou YL, Yu Y, Zou L, Li W, Huang H, Zhang A, Xu D, Zhao X.	Sci Rep	10.1038/s41598-021-94635-1	2021
	Streptococcus constellatus and Prevotella bivia penile abscess.	Nalmas S, Bishburg E, Chan T.	ScientificWorldJournal	10.1100/tsw.2007.240	2007
Phylogeny	Urinary Microbiome of Reproductive-Age Asymptomatic European Women.	Ugarcina Perovic S, Ksiezarek M, Rocha J, Cappelli EA, Sousa M, Ribeiro TG, Grosso F, Peixe L.	Microbiol Spectr	10.1128/spectrum.01308-22	2022
	Mechanistic Insights into Immune Suppression and Evasion in Bacterial Vaginosis.	Amabebe E, Anumba DOC.	Curr Microbiol	10.1007/s00284-022-02771-2	2022
	Vaginal Lactobacilli and Vaginal Dysbiosis-Associated Bacteria Differently Affect Cervical Epithelial and Immune Homeostasis and Anti-Viral Defenses.	Nicolo S, Tanturli M, Mattiuz G, Antonelli A, Baccani I, Bonaiuto C, Baldi S, Nannini G, Menicatti M, Bartolucci G, Rossolini GM, Amedei A, Torcia MG.	Int J Mol Sci	10.3390/ijms22126487	2021
Metabolism	Recent Semen Exposure Impacts the Cytokine Response and Bacterial Vaginosis in Women.	Mngomezulu K, Mzobe GF, Mtshali A, Osman F, Liebenberg LJP, Garrett N, Singh R, Rompalo A, Mindel A, Karim SSA, Karim QA, Baxter C, Ngcapu S.	Front Immunol	10.3389/fimmu.2021.695201	2021
Pathogenicity	Bacterial Vaginosis: Current Diagnostic Avenues and Future Opportunities.	Redelinghuys MJ, Geldenhuys J, Jung H, Kock MM.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00354	2020
	Enhanced IgA coating of bacteria in women with Lactobacillus crispatus-dominated vaginal microbiota.	Breedveld AC, Schuster HJ, van Houdt R, Painter RC, Mebius RE, van der Veer C, Bruisten SM, Savelkoul PHM, van Egmond M.	Microbiome	10.1186/s40168-021-01198-4	2022
	Clinical characteristics of bloodstream infection by Parvimonas micra: retrospective case series and literature review.	Watanabe T, Hara Y, Yoshimi Y, Fujita Y, Yokoe M, Noguchi Y.	BMC Infect Dis	10.1186/s12879-020-05305-y	2020
	Vaginal microbiome as a tool for prediction of chorioamnionitis in preterm labor: a pilot study.	Urushiyama D, Ohnishi E, Suda W, Kurakazu M, Kiyoshima C, Hirakawa T, Miyata K, Yotsumoto F, Nabeshima K, Setoue T, Nagamitsu S, Hattori M, Hata K, Miyamoto S.	Sci Rep	10.1038/s41598-021-98587-4	2021
	Mixed Infections of the Paronychium with Prevotella bivia.	Mirza A, Bove JJ, Litwa J, Appelbe G.	J Hand Microsurg	10.1007/s12593-011-0054-7	2012
Enzymology	Characterization of chorioamnionitis in 2nd-trimester C-section placentas and correlation with microorganism recovery from subamniotic tissues.	Hecht JL, Onderdonk A, Delaney M, Allred EN, Kliman HJ, Zambrano E, Pflueger SM, Livasy CA, Bhan I, Leviton A, ELGAN Study Investigators.	Pediatr Dev Pathol	10.2350/07-06-0285.1	2008
	Protease activities of vaginal Porphyromonas species disrupt coagulation and extracellular matrix in the cervicovaginal niche.	Lithgow KV, Buchholz VCH, Ku E, Konschuh S, D'Aubeterre A, Sycuro LK.	NPJ Biofilms Microbiomes	10.1038/s41522-022-00270-7	2022
Pathogenicity	Serum bactericidal activities of moxifloxacin and levofloxacin against aerobic and anaerobic intra-abdominal pathogens.	Stein GE, Schooley S, Tyrrell KL, Citron DM, Nicolau DP, Goldstein EJ.	Anaerobe	10.1016/j.anaerobe.2007.09.005	2008
Enzymology	Unveiling the role of Gardnerella vaginalis in polymicrobial Bacterial Vaginosis biofilms: the impact of other vaginal pathogens living as neighbors.	Castro J, Machado D, Cerca N.	ISME J	10.1038/s41396-018-0337-0	2019
Pathogenicity	Moxifloxacin resistance is prevalent among Bacteroides and Prevotella species in Greece.	Papaparaskevas J, Pantazatou A, Katsandri A, Houhoula DP, Legakis NJ, Tsakris A, Avlamis A.	J Antimicrob Chemother	10.1093/jac/dkn134	2008
	Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes.	Jie Z, Chen C, Hao L, Li F, Song L, Zhang X, Zhu J, Tian L, Tong X, Cai K, Zhang Z, Ju Y, Yu X, Li Y, Zhou H, Lu H, Qiu X, Li Q, Liao Y, Zhou D, Lian H, Zuo Y, Chen X, Rao W, Ren Y, Wang Y, Zi J, Wang R, Liu N, Wu J, Zhang W, Liu X, Zong Y, Liu W, Xiao L, Hou Y, Xu X, Yang H, Wang J, Kristiansen K, Jia H.	Genomics Proteomics Bioinformatics	10.1016/j.gpb.2021.01.005	2022
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Enzymology	The impact of cervical cytobrush sampling on cervico-vaginal immune parameters and microbiota relevant to HIV susceptibility.	Mohammadi A, Bagherichimeh S, Perry MC, Fazel A, Tevlin E, Huibner S, Tharao W, Coburn B, Kaul R.	Sci Rep	10.1038/s41598-020-65544-6	2020
Metabolism	Multi-Omics Analysis Reveals Aberrant Gut-Metabolome-Immune Network in Schizophrenia.	Fan Y, Gao Y, Ma Q, Yang Z, Zhao B, He X, Yang J, Yan B, Gao F, Qian L, Wang W, Zhu F, Ma X.	Front Immunol	10.3389/fimmu.2022.812293	2022
Pathogenicity	Peptide Inhibitor of Complement C1, RLS-0071, Reduces Zosteriform Spread of Herpes Simplex Virus Type 1 Skin Infection and Promotes Survival in Infected Mice.	Bhutta MS, Sausen DG, Reed KM, Gallo ES, Hair PS, Lassiter BP, Krishna NK, Cunnion KM, Borenstein R.	Viruses	10.3390/v13081422	2021
	Association between the urogenital microbiome and surgical treatment response in women undergoing midurethral sling operation for mixed urinary incontinence.	Richter HE, Carnes MU, Komesu YM, Lukacz ES, Arya L, Bradley M, Rogers RG, Sung VW, Siddiqui NY, Carper B, Mazloomdoost D, Dinwiddie D, Gantz MG, Eunice Kennedy Shriver National Institute of Child Health and Human Development Pelvic Floor Disorders Network.	Am J Obstet Gynecol	10.1016/j.ajog.2021.07.008	2022
	Acidic Electrolyzed Water Inhibits the Viability of Gardnerella spp. via Oxidative Stress Response.	Zhao C, Chen Y, Gao L, Huang J, Yang X, Pei L, Ye Z, Zhu L.	Front Med (Lausanne)	10.3389/fmed.2022.817957	2022
	Spectrum of antibacterial activity and mode of action of a novel tris-stilbene bacteriostatic compound.	Man NYT, Knight DR, Stewart SG, McKinley AJ, Riley TV, Hammer KA.	Sci Rep	10.1038/s41598-018-25080-w	2018
Transcriptome	De Novo Assembly and Annotation of the Vaginal Metatranscriptome Associated with Bacterial Vaginosis.	Cho WK, Jo Y, Jeong S.	Int J Mol Sci	10.3390/ijms23031621	2022
	In vitro antibacterial activity of Lactobacillus helveticus strain KS300 against diarrhoeagenic, uropathogenic and vaginosis-associated bacteria.	Atassi F, Brassart D, Grob P, Graf F, Servin AL.	J Appl Microbiol	10.1111/j.1365-2672.2006.02933.x	2006
Pathogenicity	Multicenter study of antimicrobial susceptibility of anaerobic bacteria in Korea in 2012.	Lee Y, Park YJ, Kim MN, Uh Y, Kim MS, Lee K.	Ann Lab Med	10.3343/alm.2015.35.5.479	2015
	Evaluation of vaginal microbiome equilibrium states identifies microbial parameters linked to resilience after menses and antibiotic therapy.	Lee CY, Diegel J, France MT, Ravel J, Arnold KB.	PLoS Comput Biol	10.1371/journal.pcbi.1011295	2023
Metabolism	Intratumor microbiota in cancer pathogenesis and immunity: from mechanisms of action to therapeutic opportunities.	Wang M, Yu F, Li P.	Front Immunol	10.3389/fimmu.2023.1269054	2023
	Mycobiome Dysbiosis in Women with Intrauterine Adhesions.	Liu NN, Zhao X, Tan JC, Liu S, Li BW, Xu WX, Peng L, Gu P, Li W, Shapiro R, Zheng X, Zhao W, Jiang YG, Chen D, Xu D, Wang H.	Microbiol Spectr	10.1128/spectrum.01324-22	2022
Metabolism	The lower genital tract microbiota in relation to cytokine-, SLPI- and endotoxin levels: application of checkerboard DNA-DNA hybridization (CDH).	Nikolaitchouk N, Andersch B, Falsen E, Strombeck L, Mattsby-Baltzer I.	APMIS	10.1111/j.1600-0463.2008.00808.x	2008
	Bilateral recurrent pyosalpinx in a sexually inactive 12-year-old girl secondary to rare variant of Mullerian duct anomaly.	Maraqa T, Mohamed M, Coffey D, Sachwani-Daswani GR, Alvarez C, Mercer L.	BMJ Case Rep	10.1136/bcr-2016-218924	2017
Phylogeny	Alterations of Vaginal Microbiota in Women With Infertility and Chlamydia trachomatis Infection.	Chen H, Wang L, Zhao L, Luo L, Min S, Wen Y, Lei W, Shu M, Li Z.	Front Cell Infect Microbiol	10.3389/fcimb.2021.698840	2021
	Epidemiology, Clinical Features and Outcome of Liver Abscess: A single Reference Center Experience in Qatar.	Abbas MT, Khan FY, Muhsin SA, Al-Dehwe B, Abukamar M, Elzouki AN.	Oman Med J	10.5001/omj.2014.69	2014
	Experimental intrauterine infection with Prevotella bivia in New Zealand White rabbits.	Gibbs RS, McDuffie RS, Kunze M, Barr JM, Wolf DM, Sze CI, Shikes R, Sherman MP.	Am J Obstet Gynecol	10.1016/j.ajog.2003.10.700	2004
	Vaginal and neonatal microbiota in pregnant women with preterm premature rupture of membranes and consecutive early onset neonatal sepsis.	Dos Anjos Borges LG, Pastuschek J, Heimann Y, Dawczynski K, PEONS study group, Schleussner E, Pieper DH, Zollkau J.	BMC Med	10.1186/s12916-023-02805-x	2023
	Race, the Vaginal Microbiome, and Spontaneous Preterm Birth.	Sun S, Serrano MG, Fettweis JM, Basta P, Rosen E, Ludwig K, Sorgen AA, Blakley IC, Wu MC, Dole N, Thorp JM, Siega-Riz AM, Buck GA, Fodor AA, Engel SM.	mSystems	10.1128/msystems.00017-22	2022
Pathogenicity	Human serum activity of telithromycin, azithromycin and amoxicillin/clavulanate against common aerobic and anaerobic respiratory pathogens.	Stein GE, Schooley S, Tyrrell KL, Citron DM, Goldstein EJ.	Int J Antimicrob Agents	10.1016/j.ijantimicag.2006.08.041	2007
Pathogenicity	Oral Prevotella Species and Their Connection to Events of Clinical Relevance in Gastrointestinal and Respiratory Tracts.	Kononen E, Gursoy UK.	Front Microbiol	10.3389/fmicb.2021.798763	2021
	Growth Forms of Gardnerella spp. and Lactobacillus spp. on Vaginal Cells.	Jung H, Ehlers MM, Peters RPH, Lombaard H, Redelinghuys MJ, Bezuidenhoudt JE, Kock MM.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00071	2020
	Identification and characterization of novel endolysins targeting Gardnerella vaginalis biofilms to treat bacterial vaginosis.	Arroyo-Moreno S, Cummings M, Corcoran DB, Coffey A, McCarthy RR.	NPJ Biofilms Microbiomes	10.1038/s41522-022-00285-0	2022
	Human Thanatomicrobiome Succession and Time Since Death.	Javan GT, Finley SJ, Can I, Wilkinson JE, Hanson JD, Tarone AM.	Sci Rep	10.1038/srep29598	2016
	The villain team-up or how Trichomonas vaginalis and bacterial vaginosis alter innate immunity in concert.	Fichorova RN, Buck OR, Yamamoto HS, Fashemi T, Dawood HY, Fashemi B, Hayes GR, Beach DH, Takagi Y, Delaney ML, Nibert ML, Singh BN, Onderdonk AB.	Sex Transm Infect	10.1136/sextrans-2013-051052	2013
Pathogenicity	Antimicrobial resistance and beta-lactamase production of clinical isolates of prevotella and porphyromonas species.	Bahar H, Torun MM, Demirci M, Kocazeybek B.	Chemotherapy	10.1159/000084017	2005
	Maturation of the oral microbiota during primary teeth eruption: a longitudinal, preliminary study.	Xu H, Tian B, Shi W, Tian J, Wang W, Qin M.	J Oral Microbiol	10.1080/20002297.2022.2051352	2022
Pathogenicity	The genital tract and rectal microbiomes: their role in HIV susceptibility and prevention in women.	Abdool Karim SS, Baxter C, Passmore JS, McKinnon LR, Williams BL.	J Int AIDS Soc	10.1002/jia2.25300	2019
	Daptomycin-induced Eosinophilic Pneumonia and a Review of the Published Literature.	Higashi Y, Nakamura S, Tsuji Y, Ogami C, Matsumoto K, Kawago K, Tokui K, Hayashi R, Sakamaki I, Yamamoto Y.	Intern Med	10.2169/internalmedicine.9010-17	2018
Pathogenicity	Treatment of biofilms in bacterial vaginosis by an amphoteric tenside pessary-clinical study and microbiota analysis.	Gottschick C, Deng ZL, Vital M, Masur C, Abels C, Pieper DH, Rohde M, Mendling W, Wagner-Dobler I.	Microbiome	10.1186/s40168-017-0326-y	2017
	Gardnerella vaginalis Enhances Atopobium vaginae Viability in an in vitro Model.	Castro J, Rosca AS, Cools P, Vaneechoutte M, Cerca N.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00083	2020
	Associations Between Vaginal Bacteria and Bacterial Vaginosis Signs and Symptoms: A Comparative Study of Kenyan and American Women.	Carter KA, Balkus JE, Anzala O, Kimani J, Hoffman NG, Fiedler TL, Mochache V, Fredricks DN, McClelland RS, Srinivasan S.	Front Cell Infect Microbiol	10.3389/fcimb.2022.801770	2022
Pathogenicity	Anaerobic bacteria growth in the presence of cathelicidin LL-37 and selected ceragenins delivered as magnetic nanoparticles cargo.	Durnas B, Piktel E, Watek M, Wollny T, Gozdz S, Smok-Kalwat J, Niemirowicz K, Savage PB, Bucki R.	BMC Microbiol	10.1186/s12866-017-1075-6	2017
	Robust cross-cohort gut microbiome associations with COVID-19 severity.	Li J, Li J, Ghosh TS, McCann R, Mallon P, Hill C, Draper L, Schult D, Fanning LJ, Shannon R, Sadlier C, Horgan M, O'Mahony L, O'Toole PW.	Gut Microbes	10.1080/19490976.2023.2242615	2023
	Use of DNA hybridization to detect vaginal pathogens associated with bacterial vaginosis among asymptomatic pregnant women.	Boggess KA, Trevett TN, Madianos PN, Rabe L, Hillier SL, Beck J, Offenbacher S.	Am J Obstet Gynecol	10.1016/j.ajog.2005.01.068	2005
	Fabrication and characterization of bioprints with Lactobacillus crispatus for vaginal application.	Kyser AJ, Masigol M, Mahmoud MY, Ryan M, Lewis WG, Lewis AL, Frieboes HB, Steinbach-Rankins JM.	J Control Release	10.1016/j.jconrel.2023.04.023	2023
	Next-Generation Sequencing as a Tool to Detect Vaginal Microbiota Disturbances during Pregnancy.	Sroka-Oleksiak A, Gosiewski T, Pabian W, Gurgul A, Kapusta P, Ludwig-Slomczynska AH, Wolkow PP, Brzychczy-Wloch M.	Microorganisms	10.3390/microorganisms8111813	2020
Enzymology	Universal DNA primers amplify bacterial DNA from human fetal membranes and link Fusobacterium nucleatum with prolonged preterm membrane rupture.	Cahill RJ, Tan S, Dougan G, O'Gaora P, Pickard D, Kennea N, Sullivan MH, Feldman RG, Edwards AD.	Mol Hum Reprod	10.1093/molehr/gah234	2005
Phylogeny	The cervical microbiota of Hispanics living in Puerto Rico is nonoptimal regardless of HPV status.	Vargas-Robles D, Romaguera J, Alvarado-Velez I, Tosado-Rodriguez E, Dominicci-Maura A, Sanchez M, Wiggin KJ, Martinez-Ferrer M, Gilbert JA, Forney LJ, Godoy-Vitorino F.	mSystems	10.1128/msystems.00357-23	2023
Phylogeny	Immunometabolic and potential tumor-promoting changes in 3D cervical cell models infected with bacterial vaginosis-associated bacteria.	Maarsingh JD, Laniewski P, Herbst-Kralovetz MM.	Commun Biol	10.1038/s42003-022-03681-6	2022
Metabolism	The Alterations of Vaginal Microbiome in HPV16 Infection as Identified by Shotgun Metagenomic Sequencing.	Yang Q, Wang Y, Wei X, Zhu J, Wang X, Xie X, Lu W.	Front Cell Infect Microbiol	10.3389/fcimb.2020.00286	2020
Pathogenicity	Tipping the Balance: Vitamin D Inadequacy in Children Impacts the Major Gut Bacterial Phyla.	Singh P, Rawat A, Saadaoui M, Elhag D, Tomei S, Elanbari M, Akobeng AK, Mustafa A, Abdelgadir I, Udassi S, Hendaus MA, Al Khodor S.	Biomedicines	10.3390/biomedicines10020278	2022
	Disturbances of Vaginal Microbiome Composition in Human Papillomavirus Infection and Cervical Carcinogenesis: A Qualitative Systematic Review.	Wu M, Li H, Yu H, Yan Y, Wang C, Teng F, Fan A, Xue F.	Front Oncol	10.3389/fonc.2022.941741	2022
Pathogenicity	The anti-HIV microbicide candidate RC-101 inhibits pathogenic vaginal bacteria without harming endogenous flora or mucosa.	Eade CR, Cole AL, Diaz C, Rohan LC, Parniak MA, Marx P, Tarwater PM, Gupta P, Cole AM.	Am J Reprod Immunol	10.1111/aji.12036	2013
	Adhesion of human probiotic Lactobacillus rhamnosus to cervical and vaginal cells and interaction with vaginosis-associated pathogens.	Coudeyras S, Jugie G, Vermerie M, Forestier C.	Infect Dis Obstet Gynecol	10.1155/2008/549640	2008
Pathogenicity	The Interplay of Host Microbiota and Parasitic Protozoans at Mucosal Interfaces: Implications for the Outcomes of Infections and Diseases.	Bar AK, Phukan N, Pinheiro J, Simoes-Barbosa A.	PLoS Negl Trop Dis	10.1371/journal.pntd.0004176	2015
	An experimental mouse model to study the pathogenicity of Prevotella bivia and investigations of possible virulence.	Egwari LO, Rotimi VO, Coker AO.	West Indian Med J		2000
Enzymology	Septic arthiritis due to Prevotella bivia in a patient with rheumatoid arthritis.	Alegre-Sancho JJ, Juanola X, Narvaez FJ, Roig-Escofet D.	Joint Bone Spine		2000
Phylogeny	Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research.	Golob JL, Oskotsky TT, Tang AS, Roldan A, Chung V, Ha CWY, Wong RJ, Flynn KJ, Parraga-Leo A, Wibrand C, Minot SS, Oskotsky B, Andreoletti G, Kosti I, Bletz J, Nelson A, Gao J, Wei Z, Chen G, Tang ZZ, Novielli P, Romano D, Pantaleo E, Amoroso N, Monaco A, Vacca M, De Angelis M, Bellotti R, Tangaro S, Kuntzleman A, Bigcraft I, Techtmann S, Bae D, Kim E, Jeon J, Joe S, Preterm Birth DREAM Community, Theis KR, Ng S, Lee YS, Diaz-Gimeno P, Bennett PR, MacIntyre DA, Stolovitzky G, Lynch SV, Albrecht J, Gomez-Lopez N, Romero R, Stevenson DK, Aghaeepour N, Tarca AL, Costello JC, Sirota M.	Cell Rep Med	10.1016/j.xcrm.2023.101350	2024
	Update on novel validly published and included bacterial taxa derived from human clinical specimens and taxonomic revisions published in 2023.	Carella A, Carroll KC, Munson E.	J Clin Microbiol	10.1128/jcm.01004-24	2024
Phylogeny	Identification and antimicrobial susceptibility of micro-organisms recovered from cutaneous lesions of human American tegumentary leishmaniasis in Minas Gerais, Brazil.	Fontes CO, Carvalho MAR, Nicoli JR, Hamdan JS, Mayrink W, Genaro O, Carmo LS, Farias LM.	J Med Microbiol	10.1099/jmm.0.46070-0	2005
	Anti-Biofilm Properties of Saccharomyces cerevisiae CNCM I-3856 and Lacticaseibacillus rhamnosus ATCC 53103 Probiotics against G. vaginalis.	Sabbatini S, Monari C, Ballet N, Decherf AC, Bozza S, Camilloni B, Perito S, Vecchiarelli A.	Microorganisms	10.3390/microorganisms8091294	2020
	Anaerobes and bacterial vaginosis in pregnancy: virulence factors contributing to vaginal colonisation.	Africa CW, Nel J, Stemmet M.	Int J Environ Res Public Health	10.3390/ijerph110706979	2014
	Identifying Risk Factors for Lower Reproductive Tract Infections among Women Using Reusable Absorbents in Odisha, India.	Das P, Lisnek D, Sahoo KC, Sinha S, Mohanty J, Sahoo P, Bilung B, Panda B, Tanton C, Torondel B.	Int J Environ Res Public Health	10.3390/ijerph18094778	2021
Pathogenicity	In vitro bactericidal activities of antimicrobial agents and morphologic changes on Prevotella bivia.	Mikamo H, Sato Y, Hayasaki Y, Kawazoe K, Izumi K, Satoh M, Kai J, Tamaya T.	Chemotherapy	10.1159/000007225	1999
	Probiotic Lactobacillus sp. Strains Inhibit Growth, Adhesion, Biofilm Formation, and Gene Expression of Bacterial Vaginosis-Inducing Gardnerella vaginalis.	Qian Z, Zhu H, Zhao D, Yang P, Gao F, Lu C, Yin Y, Kan S, Chen D.	Microorganisms	10.3390/microorganisms9040728	2021
Enzymology	Paronychia due to Prevotella bivia that resulted in amputation: fast and correct bacteriological diagnosis is crucial.	Riesbeck K.	J Clin Microbiol	10.1128/jcm.41.10.4901-4903.2003	2003
	Apoptosis of vaginal epithelial cells in clinical samples from women with diagnosed bacterial vaginosis.	Roselletti E, Sabbatini S, Perito S, Mencacci A, Vecchiarelli A, Monari C.	Sci Rep	10.1038/s41598-020-58862-2	2020
	Structural and functional characterisation of a stable, broad-specificity multimeric sialidase from the oral pathogen Tannerella forsythia.	Satur MJ, Urbanowicz PA, Spencer DIR, Rafferty J, Stafford GP.	Biochem J	10.1042/bcj20220244	2022
	Glucose-lowering effects of a synbiotic combination containing Pediococcus acidilactici in C. elegans and mice.	Yavorov-Dayliev D, Milagro FI, Ayo J, Oneca M, Goyache I, Lopez-Yoldi M, Aranaz P.	Diabetologia	10.1007/s00125-023-05981-w	2023
	Bacterial amylases enable glycogen degradation by the vaginal microbiome.	Jenkins DJ, Woolston BM, Hood-Pishchany MI, Pelayo P, Konopaski AN, Quinn Peters M, France MT, Ravel J, Mitchell CM, Rakoff-Nahoum S, Whidbey C, Balskus EP.	Nat Microbiol	10.1038/s41564-023-01447-2	2023
Metabolism	Purification and genetic characterization of gassericin E, a novel co-culture inducible bacteriocin from Lactobacillus gasseri EV1461 isolated from the vagina of a healthy woman.	Maldonado-Barragan A, Caballero-Guerrero B, Martin V, Ruiz-Barba JL, Rodriguez JM.	BMC Microbiol	10.1186/s12866-016-0663-1	2016
Metabolism	Impact of bacterial vaginosis, as assessed by nugent criteria and hormonal status on glycosidases and lectin binding in cervicovaginal lavage samples.	Moncla BJ, Chappell CA, Mahal LK, Debo BM, Meyn LA, Hillier SL.	PLoS One	10.1371/journal.pone.0127091	2015
	Vaginal bacterium Prevotella timonensis turns protective Langerhans cells into HIV-1 reservoirs for virus dissemination.	van Teijlingen NH, Helgers LC, Sarrami-Forooshani R, Zijlstra-Willems EM, van Hamme JL, Segui-Perez C, van Smoorenburg MY, Borgdorff H, van de Wijgert JH, van Leeuwen E, van der Post JA, Strijbis K, Ribeiro CM, Geijtenbeek TB.	EMBO J	10.15252/embj.2022110629	2022
	A commensal symbiosis between Prevotella bivia and Peptostreptococcus anaerobius involves amino acids: potential significance to the pathogenesis of bacterial vaginosis.	Pybus V, Onderdonk AB.	FEMS Immunol Med Microbiol	10.1111/j.1574-695x.1998.tb01221.x	1998
Pathogenicity	Activity of Novispirin G-10, a novel antimicrobial peptide against Chlamydia trachomatis and vaginosis-associated bacteria.	Yasin B, Pang M, Lehrer RI, Wagar EA.	Exp Mol Pathol	10.1016/s0014-4800(02)00022-9	2003
	Preterm labor and bacterial intra-amniotic infection: arachidonic acid liberation by phospholipase A2 of Prevotella bivia.	Mikamo H, Kawazoe K, Sato Y, Imai A, Tamaya T.	Anaerobe	10.1006/anae.1998.0165	1998
Phylogeny	MeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing.	Parikh HI, Koparde VN, Bradley SP, Buck GA, Sheth NU.	BMC Bioinformatics	10.1186/s12859-016-1358-1	2016
Pathogenicity	The Influence of Ethanolic Extract of Brazilian Green Propolis Gel on Hygiene and Oral Microbiota in Patients after Mandible Fractures.	Niedzielska I, Puszczewicz Z, Mertas A, Niedzielski D, Rozanowski B, Baron S, Konopka T, Machorowska-Pieniazek A, Skucha-Nowak M, Tanasiewicz M, Paluch J, Markowski J, Orzechowska-Wylegala B, Krol W, Morawiec T.	Biomed Res Int	10.1155/2016/9190814	2016
Genetics	Longitudinal fecal microbiome and metabolite data demonstrate rapid shifts and subsequent stabilization after an abrupt dietary change in healthy adult dogs.	Lin CY, Jha AR, Oba PM, Yotis SM, Shmalberg J, Honaker RW, Swanson KS.	Anim Microbiome	10.1186/s42523-022-00194-9	2022
Metabolism	Comparative microbial analysis of paired amniotic fluid and cord blood from pregnancies complicated by preterm birth and early-onset neonatal sepsis.	Wang X, Buhimschi CS, Temoin S, Bhandari V, Han YW, Buhimschi IA.	PLoS One	10.1371/journal.pone.0056131	2013
	Changes in the vaginal microbiota across a gradient of urbanization.	Vargas-Robles D, Morales N, Rodriguez I, Nieves T, Godoy-Vitorino F, Alcaraz LD, Perez ME, Ravel J, Forney LJ, Dominguez-Bello MG.	Sci Rep	10.1038/s41598-020-69111-x	2020
Metabolism	Veillonellaceae family members uniquely alter the cervical metabolic microenvironment in a human three-dimensional epithelial model.	Salliss ME, Maarsingh JD, Garza C, Laniewski P, Herbst-Kralovetz MM.	NPJ Biofilms Microbiomes	10.1038/s41522-021-00229-0	2021
Pathogenicity	In vitro and in vivo antibacterial activities of telithromycin.	Mikamo H, Yin XH, Ninomiya M, Tamaya T.	Chemotherapy	10.1159/000069789	2003
Pathogenicity	Antibacterial activity of fifth-generation dentin bonding systems.	Atac AS, Cehreli ZC, Sener B.	J Endod	10.1097/00004770-200112000-00004	2001
	Network analysis and functional estimation of the microbiome reveal the effects of cashew nut shell liquid feeding on methanogen behaviour in the rumen.	Maeda K, Nguyen VT, Suzuki T, Yamada K, Kudo K, Hikita C, Le VP, Nguyen MC, Yoshida N.	Microb Biotechnol	10.1111/1751-7915.13702	2021
Metabolism	[The range of antagonistic effects of Lactobacillus bacterial strains on etiologic agents of bacterial vaginosis].	Strus M, Malinowska M.	Med Dosw Mikrobiol		1999
	Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Function across Anatomic Sites: a Pilot Study.	Bommana S, Richards G, Kama M, Kodimerla R, Jijakli K, Read TD, Dean D.	Microbiol Spectr	10.1128/spectrum.00105-22	2022
	Sterile and microbial-associated intra-amniotic inflammation in preterm prelabor rupture of membranes.	Romero R, Miranda J, Chaemsaithong P, Chaemsaithong P, Chaiworapongsa T, Kusanovic JP, Dong Z, Ahmed AI, Shaman M, Lannaman K, Yoon BH, Hassan SS, Kim CJ, Korzeniewski SJ, Yeo L, Kim YM.	J Matern Fetal Neonatal Med	10.3109/14767058.2014.958463	2015
Enzymology	Anaerobic orbital abscess/cellulitis in a Yorkshire Terrier dog.	Homma K, Schoster JV.	J Vet Med Sci	10.1292/jvms.62.1105	2000
Pathogenicity	Comparative in vitro activity of PH-027 versus linezolid and other anti-anaerobic antimicrobials against clinical isolates of Clostridium difficile and other anaerobic bacteria.	Phillips OA, Rotimi VO, Jamal WY, Shahin M, Verghese TL.	J Chemother	10.1179/joc.2003.15.2.113	2003
	A MicroRNA Gene Panel Predicts the Vaginal Microbiota Composition.	Cheng L, Kazmierczak D, Norenhag J, Hamsten M, Fransson E, Schuppe-Koistinen I, Olovsson M, Engstrand L, Hydbring P, Du J.	mSystems	10.1128/msystems.00175-21	2021
Pathogenicity	In vitro activity of an evernimicin derivative, SCH27899, against anaerobic bacteria and Propionibacterium acnes.	Tanaka K, Kato N, Watanabe K.	J Antimicrob Chemother	10.1093/jac/46.3.465	2000
	[Clinical and bacteriological features of six cases with intracranial abscess in childhood].	Hoshino T, Nakamura A.	Kansenshogaku Zasshi	10.11150/kansenshogakuzasshi1970.76.83	2002
	The vaginal microflora in relation to gingivitis.	Persson R, Hitti J, Verhelst R, Vaneechoutte M, Persson R, Hirschi R, Weibel M, Rothen M, Temmerman M, Paul K, Eschenbach D.	BMC Infect Dis	10.1186/1471-2334-9-6	2009
Pathogenicity	In Vitro Activity of Lactobacilli with Probiotic Potential Isolated from Cocoa Fermentation against Gardnerella vaginalis.	Pessoa WFB, Melgaco ACC, de Almeida ME, Ramos LP, Rezende RP, Romano CC.	Biomed Res Int	10.1155/2017/3264194	2017
	Vaginal Microbiome Composition in Early Pregnancy and Risk of Spontaneous Preterm and Early Term Birth Among African American Women.	Dunlop AL, Satten GA, Hu YJ, Knight AK, Hill CC, Wright ML, Smith AK, Read TD, Pearce BD, Corwin EJ.	Front Cell Infect Microbiol	10.3389/fcimb.2021.641005	2021
	Diversity of vaginal microbiota in sub-Saharan Africa and its effects on HIV transmission and prevention.	Bayigga L, Kateete DP, Anderson DJ, Sekikubo M, Nakanjako D.	Am J Obstet Gynecol	10.1016/j.ajog.2018.10.014	2019
Metabolism	Evidence for a commensal, symbiotic relationship between Gardnerella vaginalis and Prevotella bivia involving ammonia: potential significance for bacterial vaginosis.	Pybus V, Onderdonk AB.	J Infect Dis	10.1093/infdis/175.2.406	1997
	Longitudinal qPCR study of the dynamics of L. crispatus, L. iners, A. vaginae, (sialidase positive) G. vaginalis, and P. bivia in the vagina.	Santiago GL, Tency I, Verstraelen H, Verhelst R, Trog M, Temmerman M, Vancoillie L, Decat E, Cools P, Vaneechoutte M.	PLoS One	10.1371/journal.pone.0045281	2012
	In vitro antagonistic effect of Lactobacillus on organisms associated with bacterial vaginosis.	Strus M, Malinowska M, Heczko PB.	J Reprod Med		2002
	Culture- and PCR-based detection of BV associated microbiological profile of the removed IUDs and correlation with the time period of IUD in place and the presence of the symptoms of genital tract infection.	Adam A, Pal Z, Terhes G, Szucs M, Gabay ID, Urban E.	Ann Clin Microbiol Antimicrob	10.1186/s12941-018-0293-6	2018
Phylogeny	Characterization of vaginal microbiota in Thai women.	Sirichoat A, Buppasiri P, Engchanil C, Namwat W, Faksri K, Sankuntaw N, Pasomsub E, Chantratita W, Lulitanond V.	PeerJ	10.7717/peerj.5977	2018
	The significance of Lactobacillus crispatus and L. vaginalis for vaginal health and the negative effect of recent sex: a cross-sectional descriptive study across groups of African women.	Jespers V, van de Wijgert J, Cools P, Verhelst R, Verstraelen H, Delany-Moretlwe S, Mwaura M, Ndayisaba GF, Mandaliya K, Menten J, Hardy L, Crucitti T, Vaginal Biomarkers Study Group.	BMC Infect Dis	10.1186/s12879-015-0825-z	2015
	Competition Among Gardnerella Subgroups From the Human Vaginal Microbiome.	Khan S, Voordouw MJ, Hill JE.	Front Cell Infect Microbiol	10.3389/fcimb.2019.00374	2019
Phylogeny	A multiomics approach to identify host-microbe alterations associated with infection severity in diabetic foot infections: a pilot study.	Radzieta M, Sadeghpour-Heravi F, Peters TJ, Hu H, Vickery K, Jeffries T, Dickson HG, Schwarzer S, Jensen SO, Malone M.	NPJ Biofilms Microbiomes	10.1038/s41522-021-00202-x	2021
Pathogenicity	Bacterial vaginosis and the cervicovaginal immune response.	Mitchell C, Marrazzo J.	Am J Reprod Immunol	10.1111/aji.12264	2014
Enzymology	FAME-04: A Phase 1 trial to assess the safety, acceptability, pharmacokinetics and pharmacodynamics of film and gel formulations of tenofovir.	Bunge KE, Dezzutti CS, Hendrix CW, Marzinke MA, Spiegel HML, Moncla BJ, Schwartz JL, Meyn LA, Richardson-Harman N, Rohan LC, Hillier SL.	J Int AIDS Soc	10.1002/jia2.25156	2018
Genetics	Multi 'Omics Analysis of Intestinal Tissue in Ankylosing Spondylitis Identifies Alterations in the Tryptophan Metabolism Pathway.	Berlinberg AJ, Regner EH, Stahly A, Brar A, Reisz JA, Gerich ME, Fennimore BP, Scott FI, Freeman AE, Kuhn KA.	Front Immunol	10.3389/fimmu.2021.587119	2021
	Gut Microbiota and Metabolic Endotoxemia in Young Obese Mexican Subjects.	Radilla-Vazquez RB, Parra-Rojas I, Martinez-Hernandez NE, Marquez-Sandoval YF, Illades-Aguiar B, Castro-Alarcon N.	Obes Facts	10.1159/000442479	2016
	In vitro and in vivo antibacterial activities of biapenem in the fields of obstetrics and gynecology.	Mikamo H, Sato Y, Hayasaki Y, Tamaya T.	Chemotherapy	10.1159/000007261	2000
Pathogenicity	In vitro activity of R-95867, the active metabolite of a new oral carbapenem, CS-834, against anaerobic bacteria.	Kato N, Tanaka K, Kato H, Watanabe K.	J Antimicrob Chemother	10.1093/jac/45.3.357	2000
	Evaluation of DNA extraction protocols from liquid-based cytology specimens for studying cervical microbiota.	Shibata T, Nakagawa M, Coleman HN, Owens SM, Greenfield WW, Sasagawa T, Robeson MS.	PLoS One	10.1371/journal.pone.0237556	2021
	Fecal Metabolome Signature in the HIV-1 Elite Control Phenotype: Enrichment of Dipeptides Acts as an HIV-1 Antagonist but a Prevotella Agonist.	Sperk M, Ambikan AT, Ray S, Singh K, Mikaeloff F, Diez RC, Narayanan A, Vesterbacka J, Nowak P, Sonnerborg A, Neogi U.	J Virol	10.1128/jvi.00479-21	2021
	Effect of Oral Probiotic Lactobacillus rhamnosus GR-1 and Lactobacillus reuteri RC-14 on the Vaginal Microbiota, Cytokines and Chemokines in Pregnant Women.	Yang S, Reid G, Challis JRG, Gloor GB, Asztalos E, Money D, Seney S, Bocking AD.	Nutrients	10.3390/nu12020368	2020
	Necrotizing Fasciitis and Toxic Shock Syndrome from Clostridium septicum following a Term Cesarean Delivery.	Rimawi BH, Graybill W, Pierce JY, Kohler M, Eriksson EA, Shary MT, Crookes B, Soper DE.	Case Rep Obstet Gynecol	10.1155/2014/724302	2014
	Defining the relationship between vaginal and urinary microbiomes.	Komesu YM, Dinwiddie DL, Richter HE, Lukacz ES, Sung VW, Siddiqui NY, Zyczynski HM, Ridgeway B, Rogers RG, Arya LA, Mazloomdoost D, Levy J, Carper B, Gantz MG, Eunice Kennedy Shriver National Institute of Child Health and Human Development Pelvic Floor Disorders Network.	Am J Obstet Gynecol	10.1016/j.ajog.2019.08.011	2020
	Overview of different scoring systems in Fournier's Gangrene and assessment of prognostic factors.	Doluoglu OG, Karagoz MA, Kilinc MF, Karakan T, Yuceturk CN, Sarici H, Ozgur BC, Eroglu M.	Turk J Urol	10.5152/tud.2016.14194	2016
Pathogenicity	In vitro and in vivo antibacterial activities of a new injectable carbapenem, S-4661, against gynaecological pathogens.	Mikamo H, Izumi K, Hua YX, Hayasaki Y, Sato Y, Tamaya T.	J Antimicrob Chemother	10.1093/jac/46.3.471	2000
	Colonization of second-trimester placenta parenchyma.	Onderdonk AB, Hecht JL, McElrath TF, Delaney ML, Allred EN, Leviton A, ELGAN Study Investigators.	Am J Obstet Gynecol	10.1016/j.ajog.2007.11.068	2008
	Induction of human immunodeficiency virus type 1 expression by anaerobes associated with bacterial vaginosis.	Hashemi FB, Ghassemi M, Faro S, Aroutcheva A, Spear GT.	J Infect Dis	10.1086/315455	2000
	Identification and strain differentiation of 'Bacteroides fragilis group' species and Prevotella bivia by PCR fingerprinting.	Claros M, Schonian G, Graser Y, Montag T, Rodloff AC, Citron DM, Goldstein EJ.	Anaerobe	10.1006/anae.1995.1020	1995
	Herlyn-Werner-Wunderlich syndrome: a rare presentation with pyocolpos.	Cox D, Ching BH.	J Radiol Case Rep	10.3941/jrcr.v6i3.877	2012
Enzymology	The role of beta-lactamase-producing-bacteria in mixed infections.	Brook I.	BMC Infect Dis	10.1186/1471-2334-9-202	2009
	Gene Expression Profiling of Human Vaginal Cells In Vitro Discriminates Compounds with Pro-Inflammatory and Mucosa-Altering Properties: Novel Biomarkers for Preclinical Testing of HIV Microbicide Candidates.	Zalenskaya IA, Joseph T, Bavarva J, Yousefieh N, Jackson SS, Fashemi T, Yamamoto HS, Settlage R, Fichorova RN, Doncel GF.	PLoS One	10.1371/journal.pone.0128557	2015
	Multilocus enzyme analysis in aerobic and anaerobic bacteria using gel electrophoresis-nitrocellulose blotting.	Combe M, Lemeland J, Pestel-Caron M, Pons J.	FEMS Microbiol Lett	10.1111/j.1574-6968.2000.tb09057.x	2000
Phylogeny	Dysbiosis of saliva microbiome in patients with oral lichen planus.	Yu FY, Wang QQ, Li M, Cheng YH, Cheng YL, Zhou Y, Yang X, Zhang F, Ge X, Zhao B, Ren XY.	BMC Microbiol	10.1186/s12866-020-01733-7	2020
Enzymology	Prevalence of beta-lactamase-producing strains among 149 anaerobic gram-negative rods isolated from periodontal pockets.	Fosse T, Madinier I, Hitzig C, Charbit Y.	Oral Microbiol Immunol	10.1034/j.1399-302x.1999.140604.x	1999
Pathogenicity	Comparison of Female Genital Tract Cytokine and Microbiota Signatures Induced by Initiation of Intramuscular DMPA and NET-EN Hormonal Contraceptives - a Prospective Cohort Analysis.	Dabee S, Tanko RF, Brown BP, Bunjun R, Balle C, Feng C, Konstantinus IN, Jaumdally SZ, Onono M, Nair G, Palanee-Phillips T, Gill K, Baeten JM, Bekker LG, Passmore JS, Heffron R, Jaspan HB, Happel AU.	Front Immunol	10.3389/fimmu.2021.760504	2021
	Prevalence of nim genes in anaerobic/facultative anaerobic bacteria isolated in South Africa.	Lubbe MM, Stanley K, Chalkley LJ.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb13453.x	1999
Pathogenicity	Antibiotic susceptibility of clinical isolates of Prevotella bivia in Lagos, Nigeria.	Egwari LO, Rotimi VO, Coker AO.	J Chemother	10.1179/joc.1996.8.1.47	1996
Pathogenicity	The Impact of Semen Exposure on the Immune and Microbial Environments of the Female Genital Tract.	Jewanraj J, Ngcapu S, Osman F, Mtshali A, Singh R, Mansoor LE, Abdool Karim SS, Abdool Karim Q, Passmore JS, Liebenberg LJP.	Front Reprod Health	10.3389/frph.2020.566559	2020
Enzymology	Neurocognitive and social-communicative function of children born very preterm at 10 years of age: Associations with microorganisms recovered from the placenta parenchyma.	Tomlinson MS, Santos HP, Stewart JR, Joseph R, Leviton A, Onderdonk AB, Kuban KCK, Heeren T, O'Shea TM, Fry RC, ELGAN Study Investigators.	J Perinatol	10.1038/s41372-019-0505-8	2020
	Deep sequencing of the vaginal microbiota of women with HIV.	Hummelen R, Fernandes AD, Macklaim JM, Dickson RJ, Changalucha J, Gloor GB, Reid G.	PLoS One	10.1371/journal.pone.0012078	2010
	In vitro activities of E1101, a novel oral cephalosporin, against bacteria causing infections in obstetric and gynecological patients.	Mikamo H, Sato Y, Hayasaki Y, Kawazoe K, Tamaya T.	Chemotherapy	10.1159/000007131	1998
Pathogenicity	In vitro activities of pazufloxacin, a novel injectable quinolone, against bacteria causing infections in obstetric and gynecological patients.	Mikamo H, Sato Y, Hayasaki Y, Kawazoe K, Tamaya T.	Chemotherapy	10.1159/000007177	1999
Pathogenicity	In vitro and in vivo antibacterial activities of AM-1155 in the fields of obstetrics and gynecology.	Mikamo H, Kawazoe K, Sato Y, Hayasaki Y, Izumi K, Tamaya T.	Chemotherapy	10.1159/000007120	1998
Pathogenicity	Synergic activity, for anaerobes, of trovafloxacin with clindamycin or metronidazole: chequerboard and time-kill methods.	Ednie LM, Credito KL, Khantipong M, Jacobs MR, Appelbaum PC.	J Antimicrob Chemother	10.1093/jac/45.5.633	2000
Enzymology	Prevotella bivia as an unusual cause of endocarditis.	Kentos A, Motte S, Nonhoff C, Jacobs F, De Smet JM, Serruys E, Thys JP.	Eur J Clin Microbiol Infect Dis	10.1007/bf01982187	1994
Enzymology	Elastase activity of anaerobes isolated from amniotic fluid with preterm premature rupture of membranes.	Mikamo H, Kawazoe K, Sato Y, Tamaya T.	Am J Obstet Gynecol	10.1016/s0002-9378(99)70217-6	1999
Transcriptome	Bacterial communities in semen from men of infertile couples: metagenomic sequencing reveals relationships of seminal microbiota to semen quality.	Weng SL, Chiu CM, Lin FM, Huang WC, Liang C, Yang T, Yang TL, Liu CY, Wu WY, Chang YA, Chang TH, Huang HD.	PLoS One	10.1371/journal.pone.0110152	2014
Metabolism	Influence of the vaginal microbiota on toxic shock syndrome toxin 1 production by Staphylococcus aureus.	MacPhee RA, Miller WL, Gloor GB, McCormick JK, Hammond JA, Burton JP, Reid G.	Appl Environ Microbiol	10.1128/aem.02908-12	2013
Metabolism	Tumor-resident Lactobacillus iners confer chemoradiation resistance through lactate-induced metabolic rewiring.	Colbert LE, El Alam MB, Wang R, Karpinets T, Lo D, Lynn EJ, Harris TA, Elnaggar JH, Yoshida-Court K, Tomasic K, Bronk JK, Sammouri J, Yanamandra AV, Olvera AV, Carlin LG, Sims T, Delgado Medrano AY, Napravnik TC, O'Hara M, Lin D, Abana CO, Li HX, Eifel PJ, Jhingran A, Joyner M, Lin L, Ramondetta LM, Futreal AM, Schmeler KM, Mathew G, Dorta-Estremera S, Zhang J, Wu X, Ajami NJ, Wong M, Taniguchi C, Petrosino JF, Sastry KJ, Okhuysen PC, Martinez SA, Tan L, Mahmud I, Lorenzi PL, Wargo JA, Klopp AH.	Cancer Cell	10.1016/j.ccell.2023.09.012	2023
	Bacterial vaginosis: drivers of recurrence and challenges and opportunities in partner treatment.	Vodstrcil LA, Muzny CA, Plummer EL, Sobel JD, Bradshaw CS.	BMC Med	10.1186/s12916-021-02077-3	2021
Pathogenicity	Therapeutic effects of cefozopran on polymicrobial infections associated with Enterococcus faecalis in a Rat pyometra model.	Mikamo H, Kawazoe K, Sato Y, Izumi K, Tamaya T.	Chemotherapy	10.1159/000007100	1998
Enzymology	Proteolysis and utilization of albumin by enrichment cultures of subgingival microbiota.	Wei GX, van der Hoeven JS, Smalley JW, Mikx FH, Fan MW.	Oral Microbiol Immunol	10.1034/j.1399-302x.1999.140603.x	1999
Phylogeny	In Silico and Experimental Evaluation of Primer Sets for Species-Level Resolution of the Vaginal Microbiota Using 16S Ribosomal RNA Gene Sequencing.	Van Der Pol WJ, Kumar R, Morrow CD, Blanchard EE, Taylor CM, Martin DH, Lefkowitz EJ, Muzny CA.	J Infect Dis	10.1093/infdis/jiy508	2019
	Development and evaluation of rapid novel isothermal amplification assays for important veterinary pathogens: Chlamydia psittaci and Chlamydia pecorum.	Jelocnik M, Islam MM, Madden D, Jenkins C, Branley J, Carver S, Polkinghorne A.	PeerJ	10.7717/peerj.3799	2017
Phylogeny	A longitudinal analysis of the vaginal microbiota and vaginal immune mediators in women from sub-Saharan Africa.	Jespers V, Kyongo J, Joseph S, Hardy L, Cools P, Crucitti T, Mwaura M, Ndayisaba G, Delany-Moretlwe S, Buyze J, Vanham G, van de Wijgert JHHM.	Sci Rep	10.1038/s41598-017-12198-6	2017
Enzymology	Insights into the skin microbiome dynamics of leprosy patients during multi-drug therapy and in healthy individuals from Brazil.	Silva PES, Reis MP, Avila MP, Dias MF, Costa PS, Suhadolnik MLS, Kunzmann BG, Carmo AO, Kalapotakis E, Chartone-Souza E, Nascimento AMA.	Sci Rep	10.1038/s41598-018-27074-0	2018
	Interactions between microbiota and cervical epithelial, immune, and mucus barrier.	Dong M, Dong Y, Bai J, Li H, Ma X, Li B, Wang C, Li H, Qi W, Wang Y, Fan A, Han C, Xue F.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1124591	2023
	Vaginal impact of the oral administration of total freeze-dried culture of LCR 35 in healthy women.	Bohbot JM, Cardot JM.	Infect Dis Obstet Gynecol	10.1155/2012/503648	2012
	In vitro and in vivo antibacterial activities of a new carbapenem BO-2727 for use in obstetrics and gynecology.	Mikamo H, Kawazoe K, Izumi K, Sato Y, Tamaya T.	Chemotherapy	10.1159/000007084	1998
	PCR Conditions for 16S Primers for Analysis of Microbes in the Colon of Rats.	Guillen IA, Camacho H, Tuero AD, Bacardi D, Palenzuela DO, Aguilera A, Silva JA, Estrada R, Gell O, Suarez J, Ancizar J, Brown E, Colarte AB, Castro J, Novoa LI.	J Biomol Tech	10.7171/jbt.16-2703-002	2016
Phylogeny	Vaginal Microbiome Signature Is Associated With Spontaneous Preterm Delivery.	Hocevar K, Maver A, Vidmar Simic M, Hodzic A, Haslberger A, Premru Sersen T, Peterlin B.	Front Med (Lausanne)	10.3389/fmed.2019.00201	2019
Enzymology	Vaginal microflora in postmenopausal women who have not received estrogen replacement therapy.	Hillier SL, Lau RJ.	Clin Infect Dis	10.1086/516221	1997
	Recent advances in cultivation-independent molecular-based techniques for the characterization of vaginal eubiosis and dysbiosis.	Lamont RF, van den Munckhof EH, Luef BM, Vinter CA, Jorgensen JS.	Fac Rev	10.12703/r/9-21	2020
Enzymology	Vaginal microbiota of healthy pregnant Mexican women is constituted by four Lactobacillus species and several vaginosis-associated bacteria.	Hernandez-Rodriguez C, Romero-Gonzalez R, Albani-Campanario M, Figueroa-Damian R, Meraz-Cruz N, Hernandez-Guerrero C.	Infect Dis Obstet Gynecol	10.1155/2011/851485	2011
	Inflammatory and antimicrobial properties differ between vaginal Lactobacillus isolates from South African women with non-optimal versus optimal microbiota.	Manhanzva MT, Abrahams AG, Gamieldien H, Froissart R, Jaspan H, Jaumdally SZ, Barnabas SL, Dabee S, Bekker LG, Gray G, Passmore JS, Masson L.	Sci Rep	10.1038/s41598-020-62184-8	2020
	Effects of prophylactic antibiotics on endometrial flora in women with postcesarean endometritis.	Newton ER, Wallace PA.	Obstet Gynecol	10.1016/s0029-7844(98)00164-1	1998
	A Cationic Amphipathic Tilapia Piscidin 4 Peptide-Based Antimicrobial Formulation Promotes Eradication of Bacterial Vaginosis-Associated Bacterial Biofilms.	Lin WC, Chen YR, Chuang CM, Chen JY.	Front Microbiol	10.3389/fmicb.2022.806654	2022
	Probiotics to counteract biofilm-associated infections: promising and conflicting data.	Vuotto C, Longo F, Donelli G.	Int J Oral Sci	10.1038/ijos.2014.52	2014
Phylogeny	Evaluation of the association between the concentrations of key vaginal bacteria and the increased risk of HIV acquisition in African women from five cohorts: a nested case-control study.	McClelland RS, Lingappa JR, Srinivasan S, Kinuthia J, John-Stewart GC, Jaoko W, Richardson BA, Yuhas K, Fiedler TL, Mandaliya KN, Munch MM, Mugo NR, Cohen CR, Baeten JM, Celum C, Overbaugh J, Fredricks DN.	Lancet Infect Dis	10.1016/s1473-3099(18)30058-6	2018
Metabolism	Immunoglobulin A response against Gardnerella vaginalis hemolysin and sialidase activity in bacterial vaginosis.	Cauci S, Driussi S, Monte R, Lanzafame P, Pitzus E, Quadrifoglio F.	Am J Obstet Gynecol	10.1016/s0002-9378(98)70430-2	1998
	Complementing 16S rRNA Gene Amplicon Sequencing with Total Bacterial Load To Infer Absolute Species Concentrations in the Vaginal Microbiome.	Tettamanti Boshier FA, Srinivasan S, Lopez A, Hoffman NG, Proll S, Fredricks DN, Schiffer JT.	mSystems	10.1128/msystems.00777-19	2020
Pathogenicity	Novel vaginal microflora colonization model providing new insight into microbicide mechanism of action.	Fichorova RN, Yamamoto HS, Delaney ML, Onderdonk AB, Doncel GF.	mBio	10.1128/mbio.00168-11	2011
Enzymology	Vaginal microbiota diversity and paucity of Lactobacillus species are associated with persistent hrHPV infection in HIV negative but not in HIV positive women.	Dareng EO, Ma B, Adebamowo SN, Famooto A, Ravel J, Pharoah PP, Adebamowo CA.	Sci Rep	10.1038/s41598-020-76003-7	2020
Pathogenicity	Comparative in-vitro and in-vivo activity of AM-1155 against anaerobic bacteria.	Kato N, Kato H, Tanaka-Bandoh K, Watanabe K, Ueno K.	J Antimicrob Chemother	10.1093/jac/40.5.631	1997
	Therapeutic effects of cefluprenam (CFLP) on polymicrobial infections associated with Enterococcus faecalis in rat pyometra model.	Mikamo H, Kawazoe K, Izumi K, Hachiya S, Satoh M, Munakata K, Tamaya T.	Int J Antimicrob Agents	10.1016/s0924-8579(96)00329-9	1997
Metabolism	IL-1beta, IL-6, TNFalpha, fetal fibronectin, and endotoxin in the lower genital tract of pregnant women with bacterial vaginosis.	Mattsby-Baltzer I, Platz-Christensen JJ, Hosseini N, Rosen P.	Acta Obstet Gynecol Scand	10.1080/j.1600-0412.1998.770701.x	1998
	Evaluation of Lactobacilli for Antagonistic Activity Against the Growth, Adhesion and Invasion of Klebsiella pneumoniae and Gardnerella vaginalis.	Tsai CC, Lai TM, Hsieh YM.	Indian J Microbiol	10.1007/s12088-018-0753-x	2019
	Studies on the pathogenicity of anaerobes, especially Prevotella bivia, in a rat pyometra model.	Mikamo H, Kawazoe K, Izumi K, Watanabe K, Ueno K, Tamaya T.	Infect Dis Obstet Gynecol	10.1002/(sici)1098-0997(1998)6:2<61::aid-idog6>3.0.co;2-a	1998
Pathogenicity	Comparison of activities of trovafloxacin (CP-99,219) and five other agents against 585 anaerobes with use of three media.	Hecht DW, Osmolski JR.	Clin Infect Dis	10.1093/clinids/23.supplement_1.s44	1996
Pathogenicity	Comparison of in vitro activities of DU-6859a and other fluoroquinolones against Japanese isolates of anaerobic bacteria.	Kato N, Kato H, Tanaka-Bando K, Watanabe K, Ueno K.	Clin Infect Dis	10.1093/clinids/23.supplement_1.s31	1996
	Distribution and mobility of the tetracycline resistance determinant tetQ.	Leng Z, Riley DE, Berger RE, Krieger JN, Roberts MC.	J Antimicrob Chemother	10.1093/jac/40.4.551	1997
	Comparative genome analyses of Lactobacillus crispatus isolated from different ecological niches reveal an environmental adaptation of this species to the human vaginal environment.	Mancabelli L, Mancino W, Lugli GA, Milani C, Viappiani A, Anzalone R, Longhi G, van Sinderen D, Ventura M, Turroni F.	Appl Environ Microbiol	10.1128/aem.02899-20	2021
	Human Factor H Domains 6 and 7 Fused to IgG1 Fc Are Immunotherapeutic against Neisseria gonorrhoeae.	Shaughnessy J, Lewis LA, Zheng B, Carr C, Bass I, Gulati S, DeOliveira RB, Gose S, Reed GW, Botto M, Rice PA, Ram S.	J Immunol	10.4049/jimmunol.1701666	2018
	Eradication of multidrug-resistant pseudomonas biofilm with pulsed electric fields.	Khan SI, Blumrosen G, Vecchio D, Golberg A, McCormack MC, Yarmush ML, Hamblin MR, Austen WG.	Biotechnol Bioeng	10.1002/bit.25818	2016
	The Vaginal Microbiota, Bacterial Biofilms and Polymeric Drug-Releasing Vaginal Rings.	Carson L, Merkatz R, Martinelli E, Boyd P, Variano B, Sallent T, Malcolm RK.	Pharmaceutics	10.3390/pharmaceutics13050751	2021
	Role of bacterial vaginosis in pelvic inflammatory disease.	Sweet RL.	Clin Infect Dis	10.1093/clinids/20.supplement_2.s271	1995
Phylogeny	Bacterial biota of women with bacterial vaginosis treated with lactoferrin: an open prospective randomized trial.	Pino A, Giunta G, Randazzo CL, Caruso S, Caggia C, Cianci A.	Microb Ecol Health Dis	10.1080/16512235.2017.1357417	2017
Pathogenicity	Effects of combined oral contraceptives, depot medroxyprogesterone acetate and the levonorgestrel-releasing intrauterine system on the vaginal microbiome.	Brooks JP, Edwards DJ, Blithe DL, Fettweis JM, Serrano MG, Sheth NU, Strauss JF, Buck GA, Jefferson KK.	Contraception	10.1016/j.contraception.2016.11.006	2017
	Establishment of vaginal microbiota composition in early pregnancy and its association with subsequent preterm prelabor rupture of the fetal membranes.	Brown RG, Al-Memar M, Marchesi JR, Lee YS, Smith A, Chan D, Lewis H, Kindinger L, Terzidou V, Bourne T, Bennett PR, MacIntyre DA.	Transl Res	10.1016/j.trsl.2018.12.005	2019
Pathogenicity	Vaginal microbiome modulates topical antiretroviral drug pharmacokinetics.	Taneva E, Sinclair S, Mesquita PM, Weinrick B, Cameron SA, Cheshenko N, Reagle K, Frank B, Srinivasan S, Fredricks D, Keller MJ, Herold BC.	JCI Insight	10.1172/jci.insight.99545	2018
	A study of the anaerobic bacterial flora of the female genital tract in health and disease.	Egwari L, Rotimi VO, Abudu OO, Coker AO.	Cent Afr J Med		1995
	Effect of Candida albicans infection and clotrimazole treatment on vaginal microflora in vitro.	Ross RA, Lee ML, Onderdonk AB.	Obstet Gynecol	10.1016/0029-7844(95)00318-l	1995
Genetics	Tongue coating microbiome as a potential biomarker for gastritis including precancerous cascade.	Cui J, Cui H, Yang M, Du S, Li J, Li Y, Liu L, Zhang X, Li S.	Protein Cell	10.1007/s13238-018-0596-6	2019
	Bacteremia shortly after placental separation during cesarean delivery.	Boggess KA, Watts DH, Hillier SL, Krohn MA, Benedetti TJ, Eschenbach DA.	Obstet Gynecol	10.1016/0029-7844(96)00037-3	1996
	Microorganisms in the human placenta are associated with altered CpG methylation of immune and inflammation-related genes.	Tomlinson MS, Bommarito PA, Martin EM, Smeester L, Fichorova RN, Onderdonk AB, Kuban KCK, O'Shea TM, Fry RC.	PLoS One	10.1371/journal.pone.0188664	2017
Enzymology	Internal bacterial flora of solid uterine cervical cancer.	Mikamo H, Izumi K, Ito K, Watanabe K, Ueno K, Tamaya T.	Kansenshogaku Zasshi	10.11150/kansenshogakuzasshi1970.67.1057	1993
	Effects of an over-the-counter lactic-acid containing intra-vaginal douching product on the vaginal microbiota.	van der Veer C, Bruisten SM, van Houdt R, Matser AA, Tachedjian G, van de Wijgert JHHM, de Vries HJC, van der Helm JJ.	BMC Microbiol	10.1186/s12866-019-1545-0	2019
Pathogenicity	In vitro activity of meropenem compared with imipenem, metronidazole, ampicillin, and ampicillin/sulbactam against anaerobes.	Schumacher U, Manncke B, Gerbracht K, Werner H.	Arzneimittelforschung		1994
	Low-dose inoculation of Escherichia coli achieves robust vaginal colonization and results in ascending infection accompanied by severe uterine inflammation in mice.	O'Brien VP, Gilbert NM, Lebratti T, Agarwal K, Foster L, Shin H, Lewis AL.	PLoS One	10.1371/journal.pone.0219941	2019
	[Lemierre's post-tonsillitis sepsis with meningitis and intravascular consumption coagulopathy as complication of infectious mononucleosis with pansinusitis].	Busch N, Mertens PR, Schonfelder T, Nguyen H, Marschall HU, Kierdorf H, Haase G, Urhahn R, Sieberth HG, Matern S.	Dtsch Med Wochenschr	10.1055/s-2008-1042978	1996
Enzymology	Microbiome profile of the amniotic fluid as a predictive biomarker of perinatal outcome.	Urushiyama D, Suda W, Ohnishi E, Araki R, Kiyoshima C, Kurakazu M, Sanui A, Yotsumoto F, Murata M, Nabeshima K, Yasunaga S, Saito S, Nomiyama M, Hattori M, Miyamoto S, Hata K.	Sci Rep	10.1038/s41598-017-11699-8	2017
Pathogenicity	Comparative in vitro activities of LFF571 against Clostridium difficile and 630 other intestinal strains of aerobic and anaerobic bacteria.	Citron DM, Tyrrell KL, Merriam CV, Goldstein EJ.	Antimicrob Agents Chemother	10.1128/aac.06305-11	2012
	Anti-trichomonad activities of different compounds from foods, marine products, and medicinal plants: a review.	Friedman M, Tam CC, Cheng LW, Land KM.	BMC Complement Med Ther	10.1186/s12906-020-03061-9	2020
Pathogenicity	Metronidazole resistance in Prevotella spp. and description of a new nim gene in Prevotella baroniae.	Alauzet C, Mory F, Teyssier C, Hallage H, Carlier JP, Grollier G, Lozniewski A.	Antimicrob Agents Chemother	10.1128/aac.01003-09	2010
Phylogeny	A Lactobacillus-Deficient Vaginal Microbiota Dominates Postpartum Women in Rural Malawi.	Doyle R, Gondwe A, Fan YM, Maleta K, Ashorn P, Klein N, Harris K.	Appl Environ Microbiol	10.1128/aem.02150-17	2018
Enzymology	Complex ecological interactions of Staphylococcus aureus in tampons during menstruation.	Jacquemond I, Muggeo A, Lamblin G, Tristan A, Gillet Y, Bolze PA, Bes M, Gustave CA, Rasigade JP, Golfier F, Ferry T, Dubost A, Abrouk D, Barreto S, Prigent-Combaret C, Thioulouse J, Lina G, Muller D.	Sci Rep	10.1038/s41598-018-28116-3	2018
Phylogeny	Uncultivated bacteria as etiologic agents of intra-amniotic inflammation leading to preterm birth.	Han YW, Shen T, Chung P, Buhimschi IA, Buhimschi CS.	J Clin Microbiol	10.1128/jcm.01206-08	2009
Pathogenicity	In vitro antibacterial activity of FK037, a new parenteral broad-spectrum cephalosporin, against recent clinical isolates in the fields of obstetrics and gynecology.	Mikamo H, Izumi K, Ito K, Katoh N, Watanabe K, Ueno K, Tamaya T.	Chemotherapy	10.1159/000239188	1994
	Intra-abdominal Infections: The Role of Anaerobes, Enterococci, Fungi, and Multidrug-Resistant Organisms.	Marcus G, Levy S, Salhab G, Mengesha B, Tzuman O, Shur S, Burke E, Mayeda RC, Cochavi L, Perluk I, Zaidenstein R, Lazarovitch T, Dadon M, Marchaim D.	Open Forum Infect Dis	10.1093/ofid/ofw232	2016
Pathogenicity	In vitro activities of 10 antimicrobial agents against bacterial vaginosis-associated anaerobic isolates from pregnant Japanese and Thai women.	Puapermpoonsiri S, Watanabe K, Kato N, Ueno K.	Antimicrob Agents Chemother	10.1128/aac.41.10.2297	1997
	Quantitative modeling predicts mechanistic links between pre-treatment microbiome composition and metronidazole efficacy in bacterial vaginosis.	Lee CY, Cheu RK, Lemke MM, Gustin AT, France MT, Hampel B, Thurman AR, Doncel GF, Ravel J, Klatt NR, Arnold KB.	Nat Commun	10.1038/s41467-020-19880-w	2020
Pathogenicity	Microbiologic response to treatment of bacterial vaginosis with topical clindamycin or metronidazole.	Austin MN, Beigi RH, Meyn LA, Hillier SL.	J Clin Microbiol	10.1128/jcm.43.9.4492-4497.2005	2005
	Bacterial vaginosis and human immunodeficiency virus infection.	Spear GT, St John E, Zariffard MR.	AIDS Res Ther	10.1186/1742-6405-4-25	2007
Enzymology	Vaginal microflora associated with bacterial vaginosis in nonpregnant women: reliability of sialidase detection.	Smayevsky J, Canigia LF, Lanza A, Bianchini H.	Infect Dis Obstet Gynecol	10.1155/s1064744901000047	2001
Pathogenicity	Patterns of susceptibility to fluoroquinolones among anaerobic bacterial isolates in the United States.	Goldstein EJ.	Clin Infect Dis	10.1093/clinids/16.supplement_4.s377	1993
Phylogeny	Differential effects of depot medroxyprogesterone acetate administration on vaginal microbiome in Hispanic White and Black women.	Yang L, Hao Y, Hu J, Kelly D, Li H, Brown S, Tasker C, Roche NE, Chang TL, Pei Z.	Emerg Microbes Infect	10.1080/22221751.2018.1563458	2019
Phylogeny	Numerical taxonomy of Bacteroides and other genera of Gram-negative anaerobic rods.	Jenkins SA, Drucker DB, Hillier VF, Ganguli LA.	Microbios		1992
	Comparative analysis of vaginal microbiota sampling using 16S rRNA gene analysis.	Virtanen S, Kalliala I, Nieminen P, Salonen A.	PLoS One	10.1371/journal.pone.0181477	2017
Pathogenicity	Characterization of Leukocytes From HIV-ART Patients Using Combined Cytometric Profiles of 72 Cell Markers.	Leite Pereira A, Tchitchek N, Lambotte O, Le Grand R, Cosma A.	Front Immunol	10.3389/fimmu.2019.01777	2019
Enzymology	The normal vaginal flora, H2O2-producing lactobacilli, and bacterial vaginosis in pregnant women.	Hillier SL, Krohn MA, Rabe LK, Klebanoff SJ, Eschenbach DA.	Clin Infect Dis	10.1093/clinids/16.supplement_4.s273	1993
Phylogeny	Cervicovaginal Fungi and Bacteria Associated With Cervical Intraepithelial Neoplasia and High-Risk Human Papillomavirus Infections in a Hispanic Population.	Godoy-Vitorino F, Romaguera J, Zhao C, Vargas-Robles D, Ortiz-Morales G, Vazquez-Sanchez F, Sanchez-Vazquez M, de la Garza-Casillas M, Martinez-Ferrer M, White JR, Bittinger K, Dominguez-Bello MG, Blaser MJ.	Front Microbiol	10.3389/fmicb.2018.02533	2018
	Update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA 15: suitability of taxonomic units notified to EFSA until September 2021.	EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis K, Allende A, Alvarez-Ordonez A, Bolton D, Bover-Cid S, Chemaly M, Davies R, De Cesare A, Hilbert F, Lindqvist R, Nauta M, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Cocconcelli PS, Fernandez Escamez PS, Prieto-Maradona M, Querol A, Sijtsma L, Evaristo Suarez J, Sundh I, Vlak J, Barizzone F, Hempen M, Herman L.	EFSA J	10.2903/j.efsa.2022.7045	2022
Pathogenicity	Comparative in vitro activity of cefpodoxime against anaerobes other than Bacteroides fragilis.	Werner H, Heizmann WR, Hoflsauer M.	Infection	10.1007/bf01645372	1991
	The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies.	Brooks JP, Edwards DJ, Harwich MD, Rivera MC, Fettweis JM, Serrano MG, Reris RA, Sheth NU, Huang B, Girerd P, Vaginal Microbiome Consortium, Strauss JF, Jefferson KK, Buck GA.	BMC Microbiol	10.1186/s12866-015-0351-6	2015
	Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections.	Fenollar F, Roux V, Stein A, Drancourt M, Raoult D.	J Clin Microbiol	10.1128/jcm.44.3.1018-1028.2006	2006
	Lactocin 160, a Bacteriocin Produced by Vaginal Lactobacillus rhamnosus, Targets Cytoplasmic Membranes of the Vaginal Pathogen, Gardnerella vaginalis.	Turovskiy Y, Ludescher RD, Aroutcheva AA, Faro S, Chikindas ML.	Probiotics Antimicrob Proteins	10.1007/s12602-008-9003-6	2009
Metabolism	Interaction of Gardnerella vaginalis and Vaginolysin with the Apical versus Basolateral Face of a Three-Dimensional Model of Vaginal Epithelium.	Garcia EM, Kraskauskiene V, Koblinski JE, Jefferson KK.	Infect Immun	10.1128/iai.00646-18	2019
Enzymology	A quantitative analysis of Ureaplasma urealyticum and Ureaplasma parvum compared with host immune response in preterm neonates at risk of developing bronchopulmonary dysplasia.	Payne MS, Goss KC, Connett GJ, Legg JP, Bruce KD, Chalker V.	J Clin Microbiol	10.1128/jcm.06625-11	2012
Metabolism	Oleate lipase activity in Gardnerella vaginalis and reconsideration of existing biotype schemes.	Moncla BJ, Pryke KM.	BMC Microbiol	10.1186/1471-2180-9-78	2009
Pathogenicity	New Systems for Studying Intercellular Interactions in Bacterial Vaginosis.	Herbst-Kralovetz MM, Pyles RB, Ratner AJ, Sycuro LK, Mitchell C.	J Infect Dis	10.1093/infdis/jiw130	2016
	Changes to the gut microbiota induced by losartan contributes to its antihypertensive effects.	Robles-Vera I, Toral M, de la Visitacion N, Sanchez M, Gomez-Guzman M, Munoz R, Algieri F, Vezza T, Jimenez R, Galvez J, Romero M, Redondo JM, Duarte J.	Br J Pharmacol	10.1111/bph.14965	2020
Phylogeny	Pregnancy disorders that lead to delivery before the 28th week of gestation: an epidemiologic approach to classification.	McElrath TF, Hecht JL, Dammann O, Boggess K, Onderdonk A, Markenson G, Harper M, Delpapa E, Allred EN, Leviton A, ELGAN Study Investigators.	Am J Epidemiol	10.1093/aje/kwn202	2008
Enzymology	Detection of Atopobium vaginae in postmenopausal women by cultivation-independent methods warrants further investigation.	Burton JP, Devillard E, Cadieux PA, Hammond JA, Reid G.	J Clin Microbiol	10.1128/jcm.42.4.1829-1831.2004	2004
	Supplementation of standard antibiotic therapy with oral probiotics for bacterial vaginosis and aerobic vaginitis: a randomised, double-blind, placebo-controlled trial.	Heczko PB, Tomusiak A, Adamski P, Jakimiuk AJ, Stefanski G, Mikolajczyk-Cichonska A, Suda-Szczurek M, Strus M.	BMC Womens Health	10.1186/s12905-015-0246-6	2015
Pathogenicity	Personalized Mapping of Drug Metabolism by the Human Gut Microbiome.	Javdan B, Lopez JG, Chankhamjon P, Lee YJ, Hull R, Wu Q, Wang X, Chatterjee S, Donia MS.	Cell	10.1016/j.cell.2020.05.001	2020
Pathogenicity	Identification and characterization of bacterial vaginosis-associated pathogens using a comprehensive cervical-vaginal epithelial coculture assay.	Eade CR, Diaz C, Wood MP, Anastos K, Patterson BK, Gupta P, Cole AL, Cole AM.	PLoS One	10.1371/journal.pone.0050106	2012
Metabolism	In vitro rescue of genital strains of Chlamydia trachomatis from interferon-gamma and tryptophan depletion with indole-positive, but not indole-negative Prevotella spp.	Ziklo N, Huston WM, Taing K, Katouli M, Timms P.	BMC Microbiol	10.1186/s12866-016-0903-4	2016
	Association between the vaginal microbiota, menopause status, and signs of vulvovaginal atrophy.	Brotman RM, Shardell MD, Gajer P, Fadrosh D, Chang K, Silver MI, Viscidi RP, Burke AE, Ravel J, Gravitt PE.	Menopause	10.1097/gme.0b013e3182a4690b	2014
	Direct detection of macrolide resistance in Mycoplasma genitalium isolates from clinical specimens from France by use of real-time PCR and melting curve analysis.	Touati A, Peuchant O, Jensen JS, Bebear C, Pereyre S.	J Clin Microbiol	10.1128/jcm.03318-13	2014
Pathogenicity	Slight Pro-Inflammatory Immunomodulation Properties of Dendritic Cells by Gardnerella vaginalis: The "Invisible Man" of Bacterial Vaginosis?	Bertran T, Brachet P, Vareille-Delarbre M, Falenta J, Dosgilbert A, Vasson MP, Forestier C, Tridon A, Evrard B.	J Immunol Res	10.1155/2016/9747480	2016
Enzymology	The Effects of Hormones and Vaginal Microflora on the Glycome of the Female Genital Tract: Cervical-Vaginal Fluid.	Moncla BJ, Chappell CA, Debo BM, Meyn LA.	PLoS One	10.1371/journal.pone.0158687	2016
Pathogenicity	First comprehensive evaluation of the M.I.C. evaluator device compared to Etest and CLSI reference dilution methods for antimicrobial susceptibility testing of clinical strains of anaerobes and other fastidious bacterial species.	Rennie RP, Turnbull L, Brosnikoff C, Cloke J.	J Clin Microbiol	10.1128/jcm.05397-11	2012
	The Development of Extremely Preterm Infants Born to Women Who Had Genitourinary Infections During Pregnancy.	Leviton A, Allred EN, Kuban KC, O'Shea TM, Paneth N, Onderdonk AB, Fichorova RN, Dammann O, ELGAN Study Investigators.	Am J Epidemiol	10.1093/aje/kwv129	2016
Phylogeny	Bacterial vaginosis diagnosed by analysis of first-void-urine specimens.	Datcu R, Gesink D, Mulvad G, Montgomery-Andersen R, Rink E, Koch A, Ahrens P, Jensen JS.	J Clin Microbiol	10.1128/jcm.02347-13	2014
	Characterization of adherent bacteroidales from intestinal biopsies of children and young adults with inflammatory bowel disease.	Zitomersky NL, Atkinson BJ, Franklin SW, Mitchell PD, Snapper SB, Comstock LE, Bousvaros A.	PLoS One	10.1371/journal.pone.0063686	2013
	The Penile Microbiota in Uncircumcised and Circumcised Men: Relationships With HIV and Human Papillomavirus Infections and Cervicovaginal Microbiota.	Onywera H, Williamson AL, Ponomarenko J, Meiring TL.	Front Med (Lausanne)	10.3389/fmed.2020.00383	2020
Enzymology	Lactobacillus crispatus dominant vaginal microbiome is associated with inhibitory activity of female genital tract secretions against Escherichia coli.	Ghartey JP, Smith BC, Chen Z, Buckley N, Lo Y, Ratner AJ, Herold BC, Burk RD.	PLoS One	10.1371/journal.pone.0096659	2014
	Monitoring the prevalence of viable and dead cariogenic bacteria in oral specimens and in vitro biofilms by qPCR combined with propidium monoazide.	Yasunaga A, Yoshida A, Morikawa K, Maki K, Nakamura S, Soh I, Awano S, Ansai T.	BMC Microbiol	10.1186/1471-2180-13-157	2013
Pathogenicity	Activities of gemifloxacin (SB 265805, LB20304) compared to those of other oral antimicrobial agents against unusual anaerobes.	Goldstein EJ, Citron DM, Vreni Merriam C, Tyrrell K, Warren Y.	Antimicrob Agents Chemother	10.1128/aac.43.11.2726	1999
Enzymology	Cloning of 16S rRNA genes amplified from normal and disturbed vaginal microflora suggests a strong association between Atopobium vaginae, Gardnerella vaginalis and bacterial vaginosis.	Verhelst R, Verstraelen H, Claeys G, Verschraegen G, Delanghe J, Van Simaey L, De Ganck C, Temmerman M, Vaneechoutte M.	BMC Microbiol	10.1186/1471-2180-4-16	2004
	Bacterial vaginosis among women at high risk for HIV in Uganda: high rate of recurrent diagnosis despite treatment.	Francis SC, Looker C, Vandepitte J, Bukenya J, Mayanja Y, Nakubulwa S, Hughes P, Hayes RJ, Weiss HA, Grosskurth H.	Sex Transm Infect	10.1136/sextrans-2015-052160	2016
	A Prospective, Open-Label Pilot Study of Concurrent Male Partner Treatment for Bacterial Vaginosis.	Plummer EL, Vodstrcil LA, Doyle M, Danielewski JA, Murray GL, Fehler G, Fairley CK, Bulach DM, Garland SM, Chow EPF, Hocking JS, Bradshaw CS.	mBio	10.1128/mbio.02323-21	2021
	RUMINANT NUTRITION SYMPOSIUM: Tiny but mighty: the role of the rumen microbes in livestock production.	Cammack KM, Austin KJ, Lamberson WR, Conant GC, Cunningham HC.	J Anim Sci	10.1093/jas/skx053	2018
Genetics	Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome.	Ferretti P, Pasolli E, Tett A, Asnicar F, Gorfer V, Fedi S, Armanini F, Truong DT, Manara S, Zolfo M, Beghini F, Bertorelli R, De Sanctis V, Bariletti I, Canto R, Clementi R, Cologna M, Crifo T, Cusumano G, Gottardi S, Innamorati C, Mase C, Postai D, Savoi D, Duranti S, Lugli GA, Mancabelli L, Turroni F, Ferrario C, Milani C, Mangifesta M, Anzalone R, Viappiani A, Yassour M, Vlamakis H, Xavier R, Collado CM, Koren O, Tateo S, Soffiati M, Pedrotti A, Ventura M, Huttenhower C, Bork P, Segata N.	Cell Host Microbe	10.1016/j.chom.2018.06.005	2018
	More than meets the eye: associations of vaginal bacteria with gram stain morphotypes using molecular phylogenetic analysis.	Srinivasan S, Morgan MT, Liu C, Matsen FA, Hoffman NG, Fiedler TL, Agnew KJ, Marrazzo JM, Fredricks DN.	PLoS One	10.1371/journal.pone.0078633	2013
Metabolism	A multi-platform metabolomics approach identifies highly specific biomarkers of bacterial diversity in the vagina of pregnant and non-pregnant women.	McMillan A, Rulisa S, Sumarah M, Macklaim JM, Renaud J, Bisanz JE, Gloor GB, Reid G.	Sci Rep	10.1038/srep14174	2015
	Unraveling Gardnerella vaginalis Surface Proteins Using Cell Shaving Proteomics.	Marin E, Haesaert A, Padilla L, Adan J, Hernaez ML, Monteoliva L, Gil C.	Front Microbiol	10.3389/fmicb.2018.00975	2018
Pathogenicity	In vitro activity of gemifloxacin (SB 265805) against anaerobes.	Goldstein EJ, Citron DM, Warren Y, Tyrrell K, Merriam CV.	Antimicrob Agents Chemother	10.1128/aac.43.9.2231	1999
	Intake of probiotic food and risk of spontaneous preterm delivery.	Myhre R, Brantsaeter AL, Myking S, Gjessing HK, Sengpiel V, Meltzer HM, Haugen M, Jacobsson B.	Am J Clin Nutr	10.3945/ajcn.110.004085	2011
Pathogenicity	In vitro antimicrobial activity of MSI-78, a magainin analog.	Fuchs PC, Barry AL, Brown SD.	Antimicrob Agents Chemother	10.1128/aac.42.5.1213	1998
	Cervicovaginal fluid and semen block the microbicidal activity of hydrogen peroxide produced by vaginal lactobacilli.	O'Hanlon DE, Lanier BR, Moench TR, Cone RA.	BMC Infect Dis	10.1186/1471-2334-10-120	2010
Pathogenicity	Common Cervicovaginal Microbial Supernatants Alter Cervical Epithelial Function: Mechanisms by Which Lactobacillus crispatus Contributes to Cervical Health.	Anton L, Sierra LJ, DeVine A, Barila G, Heiser L, Brown AG, Elovitz MA.	Front Microbiol	10.3389/fmicb.2018.02181	2018
	Differences in vaginal microbiome in African American women versus women of European ancestry.	Fettweis JM, Brooks JP, Serrano MG, Sheth NU, Girerd PH, Edwards DJ, Strauss JF, The Vaginal Microbiome Consortium, Jefferson KK, Buck GA.	Microbiology (Reading)	10.1099/mic.0.081034-0	2014
	Characterization of the vaginal microbiota among sexual risk behavior groups of women with bacterial vaginosis.	Muzny CA, Sunesara IR, Kumar R, Mena LA, Griswold ME, Martin DH, Lefkowitz EJ, Schwebke JR, Swiatlo E.	PLoS One	10.1371/journal.pone.0080254	2013
	Development of a microarray-based tool to characterize vaginal bacterial fluctuations and application to a novel antibiotic treatment for bacterial vaginosis.	Cruciani F, Biagi E, Severgnini M, Consolandi C, Calanni F, Donders G, Brigidi P, Vitali B.	Antimicrob Agents Chemother	10.1128/aac.00225-15	2015
Pathogenicity	Microbial Composition Predicts Genital Tract Inflammation and Persistent Bacterial Vaginosis in South African Adolescent Females.	Lennard K, Dabee S, Barnabas SL, Havyarimana E, Blakney A, Jaumdally SZ, Botha G, Mkhize NN, Bekker LG, Lewis DA, Gray G, Mulder N, Passmore JS, Jaspan HB.	Infect Immun	10.1128/iai.00410-17	2018
	Analysis of adherence, biofilm formation and cytotoxicity suggests a greater virulence potential of Gardnerella vaginalis relative to other bacterial-vaginosis-associated anaerobes.	Patterson JL, Stull-Lane A, Girerd PH, Jefferson KK.	Microbiology (Reading)	10.1099/mic.0.034280-0	2010
Pathogenicity	Comparative in vitro activities of ABT-773 against 362 clinical isolates of anaerobic bacteria.	Citron DM, Appleman MD.	Antimicrob Agents Chemother	10.1128/aac.45.1.345-348.2001	2001
Pathogenicity	Antibacterial activity of eravacycline (TP-434), a novel fluorocycline, against hospital and community pathogens.	Sutcliffe JA, O'Brien W, Fyfe C, Grossman TH.	Antimicrob Agents Chemother	10.1128/aac.01288-13	2013
	Cross-Sectional Analysis of Selected Genital Tract Immunological Markers and Molecular Vaginal Microbiota in Sub-Saharan African Women, with Relevance to HIV Risk and Prevention.	Kyongo JK, Crucitti T, Menten J, Hardy L, Cools P, Michiels J, Delany-Moretlwe S, Mwaura M, Ndayisaba G, Joseph S, Fichorova R, van de Wijgert J, Vanham G, Arien KK, Jespers V.	Clin Vaccine Immunol	10.1128/cvi.00762-14	2015
	Multiplex detection of bacteria associated with normal microbiota and with bacterial vaginosis in vaginal swabs by use of oligonucleotide-coupled fluorescent microspheres.	Dumonceaux TJ, Schellenberg J, Goleski V, Hill JE, Jaoko W, Kimani J, Money D, Ball TB, Plummer FA, Severini A.	J Clin Microbiol	10.1128/jcm.00112-09	2009
Metabolism	Porphyromonas gingivalis lipid A phosphatase activity is critical for colonization and increasing the commensal load in the rabbit ligature model.	Zenobia C, Hasturk H, Nguyen D, Van Dyke TE, Kantarci A, Darveau RP.	Infect Immun	10.1128/iai.01136-13	2014
Phylogeny	Comparison between Gram stain and culture for the characterization of vaginal microflora: definition of a distinct grade that resembles grade I microflora and revised categorization of grade I microflora.	Verhelst R, Verstraelen H, Claeys G, Verschraegen G, Van Simaey L, De Ganck C, De Backer E, Temmerman M, Vaneechoutte M.	BMC Microbiol	10.1186/1471-2180-5-61	2005
Phylogeny	Characterization of saccharolytic Bacteroides and Prevotella isolates from infected dog and cat bite wounds in humans.	Alexander CJ, Citron DM, Hunt Gerardo S, Claros MC, Talan D, Goldstein EJ.	J Clin Microbiol	10.1128/jcm.35.2.406-411.1997	1997
	Comparative meta-RNA-seq of the vaginal microbiota and differential expression by Lactobacillus iners in health and dysbiosis.	Macklaim JM, Fernandes AD, Di Bella JM, Hammond JA, Reid G, Gloor GB.	Microbiome	10.1186/2049-2618-1-12	2013
Metabolism	Lactobacillus proteins are associated with the bactericidal activity against E. coli of female genital tract secretions.	Kalyoussef S, Nieves E, Dinerman E, Carpenter C, Shankar V, Oh J, Burd B, Angeletti RH, Buckheit KW, Fredricks DN, Madan RP, Keller MJ, Herold BC.	PLoS One	10.1371/journal.pone.0049506	2012
	Vaginal biogenic amines: biomarkers of bacterial vaginosis or precursors to vaginal dysbiosis?	Nelson TM, Borgogna JL, Brotman RM, Ravel J, Walk ST, Yeoman CJ.	Front Physiol	10.3389/fphys.2015.00253	2015
	Bacterial vaginosis presence in sexually active women in Tuzla Canton area.	Numanovic F, Hukic M, Gegic M, Nukic M, Delibegovic Z, Pasic S, Cicko E.	Bosn J Basic Med Sci	10.17305/bjbms.2008.2884	2008
	A systematic review of the factors influencing microbial colonization of the preterm infant gut.	Aguilar-Lopez M, Dinsmoor AM, Ho TTB, Donovan SM.	Gut Microbes	10.1080/19490976.2021.1884514	2021
	The ELGAN study of the brain and related disorders in extremely low gestational age newborns.	O'Shea TM, Allred EN, Dammann O, Hirtz D, Kuban KC, Paneth N, Leviton A, ELGAN study Investigators.	Early Hum Dev	10.1016/j.earlhumdev.2009.08.060	2009
	Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy.	Serrano MG, Parikh HI, Brooks JP, Edwards DJ, Arodz TJ, Edupuganti L, Huang B, Girerd PH, Bokhari YA, Bradley SP, Brooks JL, Dickinson MR, Drake JI, Duckworth RA, Fong SS, Glascock AL, Jean S, Jimenez NR, Khoury J, Koparde VN, Lara AM, Lee V, Matveyev AV, Milton SH, Mistry SD, Rozycki SK, Sheth NU, Smirnova E, Vivadelli SC, Wijesooriya NR, Xu J, Xu P, Chaffin DO, Sexton AL, Gravett MG, Rubens CE, Hendricks-Munoz KD, Jefferson KK, Strauss JF, Fettweis JM, Buck GA.	Nat Med	10.1038/s41591-019-0465-8	2019
	A Study of the Vaginal Microbiome in Healthy Canadian Women Utilizing cpn60-Based Molecular Profiling Reveals Distinct Gardnerella Subgroup Community State Types.	Albert AY, Chaban B, Wagner EC, Schellenberg JJ, Links MG, van Schalkwyk J, Reid G, Hemmingsen SM, Hill JE, Money D, VOGUE Research Group.	PLoS One	10.1371/journal.pone.0135620	2015
	Species specificity, surface exposure, protein expression, immunogenicity, and participation in biofilm formation of Porphyromonas gingivalis HmuY.	Olczak T, Wojtowicz H, Ciuraszkiewicz J, Olczak M.	BMC Microbiol	10.1186/1471-2180-10-134	2010
	Use of lactobacilli and estriol combination in the treatment of disturbed vaginal ecosystem: a review.	Unlu C, Donders G.	J Turk Ger Gynecol Assoc	10.5152/jtgga.2011.57	2011
Metabolism	Gut microbiota dysbiosis contributes to the development of hypertension.	Li J, Li J, Zhao F, Wang Y, Chen J, Tao J, Tian G, Wu S, Liu W, Cui Q, Geng B, Zhang W, Weldon R, Auguste K, Yang L, Liu X, Chen L, Yang X, Zhu B, Cai J.	Microbiome	10.1186/s40168-016-0222-x	2017
	On-demand microbicide products: design matters.	Patel SK, Rohan LC.	Drug Deliv Transl Res	10.1007/s13346-017-0385-4	2017
Genetics	Comparative genome analysis of Prevotella intermedia strain isolated from infected root canal reveals features related to pathogenicity and adaptation.	Ruan Y, Shen L, Zou Y, Qi Z, Yin J, Jiang J, Guo L, He L, Chen Z, Tang Z, Qin S.	BMC Genomics	10.1186/s12864-015-1272-3	2015
	Carious dentine provides a habitat for a complex array of novel Prevotella-like bacteria.	Nadkarni MA, Caldon CE, Chhour KL, Fisher IP, Martin FE, Jacques NA, Hunter N.	J Clin Microbiol	10.1128/jcm.42.11.5238-5244.2004	2004
	Diversity of human vaginal bacterial communities and associations with clinically defined bacterial vaginosis.	Oakley BB, Fiedler TL, Marrazzo JM, Fredricks DN.	Appl Environ Microbiol	10.1128/aem.02884-07	2008
	Two Different Species of Mycoplasma Endosymbionts Can Influence Trichomonas vaginalis Pathophysiology.	Margarita V, Bailey NP, Rappelli P, Diaz N, Dessi D, Fettweis JM, Hirt RP, Fiori PL.	mBio	10.1128/mbio.00918-22	2022
Pathogenicity	In vitro activities of cefminox against anaerobic bacteria compared with those of nine other compounds.	Hoellman DB, Spangler SK, Jacobs MR, Appelbaum PC.	Antimicrob Agents Chemother	10.1128/aac.42.3.495	1998
	Maternal microbe-specific modulation of inflammatory response in extremely low-gestational-age newborns.	Fichorova RN, Onderdonk AB, Yamamoto H, Delaney ML, DuBois AM, Allred E, Leviton A, Extremely Low Gestation Age Newborns (ELGAN) Study Investigators.	mBio	10.1128/mbio.00280-10	2011
Pathogenicity	Activity of telithromycin (HMR 3647) against anaerobic bacteria compared to those of eight other agents by time-kill methodology.	Credito KL, Ednie LM, Jacobs MR, Appelbaum PC.	Antimicrob Agents Chemother	10.1128/aac.43.8.2027	1999
Pathogenicity	In vitro and ex vivo testing of tenofovir shows it is effective as an HIV-1 microbicide.	Rohan LC, Moncla BJ, Kunjara Na Ayudhya RP, Cost M, Huang Y, Gai F, Billitto N, Lynam JD, Pryke K, Graebing P, Hopkins N, Rooney JF, Friend D, Dezzutti CS.	PLoS One	10.1371/journal.pone.0009310	2010
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	Prospective study of use of PCR amplification and sequencing of 16S ribosomal DNA from cerebrospinal fluid for diagnosis of bacterial meningitis in a clinical setting.	Schuurman T, de Boer RF, Kooistra-Smid AM, van Zwet AA.	J Clin Microbiol	10.1128/jcm.42.2.734-740.2004	2004
Pathogenicity	Comparative in vitro activities of GAR-936 against aerobic and anaerobic animal and human bite wound pathogens.	Goldstein EJ, Citron DM, Merriam CV, Warren Y, Tyrrell K.	Antimicrob Agents Chemother	10.1128/aac.44.10.2747-2751.2000	2000
Phylogeny	Scalable methods for analyzing and visualizing phylogenetic placement of metagenomic samples.	Czech L, Stamatakis A.	PLoS One	10.1371/journal.pone.0217050	2019
Pathogenicity	Health-Promoting Properties of Lactobacillus helveticus.	Taverniti V, Guglielmetti S.	Front Microbiol	10.3389/fmicb.2012.00392	2012
	The aetiology of bacterial vaginosis.	Turovskiy Y, Sutyak Noll K, Chikindas ML.	J Appl Microbiol	10.1111/j.1365-2672.2011.04977.x	2011
	Anti-infective activities of lactobacillus strains in the human intestinal microbiota: from probiotics to gastrointestinal anti-infectious biotherapeutic agents.	Lievin-Le Moal V, Servin AL.	Clin Microbiol Rev	10.1128/cmr.00080-13	2014
Enzymology	Protein banding patterns of the outer membrane-enriched fraction of Bacteroides bivius.	Dinsmoor MJ, Ebersole JE, Gibbs RS	J Clin Microbiol	10.1128/jcm.28.3.405-408.1990	1990
Phylogeny	Prevotella amnii sp. nov., isolated from human amniotic fluid.	Lawson PA, Moore E, Falsen E.	Int J Syst Evol Microbiol	10.1099/ijs.0.65118-0	2008
Metabolism	Xylanibacter oryzae gen. nov., sp. nov., a novel strictly anaerobic, Gram-negative, xylanolytic bacterium isolated from rice-plant residue in flooded rice-field soil in Japan.	Ueki A, Akasaka H, Suzuki D, Hattori S, Ueki K.	Int J Syst Evol Microbiol	10.1099/ijs.0.64364-0	2006