Sorangium cellulosum (DSM 53796, So ce56)
BacDive ID
12490
Type strain
Strain Designation
So ce56
Special Collections
DSMZ
Literature strains
Reichenbach collection
History
DSMZ <- H. Reichenbach, Gesellschaft für Biotechnologische Forschung, Braunschweig, Germany; So ce56
Links
Sorangium cellulosum So ce56 is a bacterium that was isolated from Soil with plant residues beneath Eugenia caryophyllata.
16S sequence BacteriaName and taxonomic classification
| @ref 20215 |
|
Last LPSN update
2026-05-29 08:27:49 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Deltaproteobacteria |
| Order Polyangiales |
| Family Polyangiaceae |
| Genus Sorangium |
| Species Sorangium cellulosum |
| Full scientific name Sorangium cellulosum (Brockman 1989 ex Imshenetski and Solntseva 1936) Reichenbach 2007 |
| Synonyms (1) |
Culture and growth conditions
Culture medium
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17230 | VY/2 AGAR (DSMZ Medium 9) | Medium recipe at MediaDive  | Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water |
Culture temp
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 17230 | positive | growth | 28 |
Physiology and metabolism
Metabolite utilization
Pathway annotation
Computationally determined by 
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 |   |
|
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | |
|
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | |
|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | |
|
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | |
|
| 66794 | acetoin degradation | 100 | 3 of 3 | |
|
| 66794 | dolichol and dolichyl phosphate biosynthesis | 100 | 2 of 2 | |
|
| 66794 | ethanol fermentation | 100 | 2 of 2 | |
|
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | |
|
| 66794 | adipate degradation | 100 | 2 of 2 | |
|
| 66794 | glycogen metabolism | 100 | 5 of 5 | |
|
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | |
|
| 66794 | denitrification | 100 | 2 of 2 | |
|
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | |
|
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | |
|
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | |
|
| 66794 | starch degradation | 100 | 10 of 10 | |
|
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | |
|
| 66794 | biotin biosynthesis | 100 | 4 of 4 | |
|
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | |
|
| 66794 | tetrahydrofolate metabolism | 100 | 14 of 14 | |
|
| 66794 | folate polyglutamylation | 100 | 1 of 1 | |
|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | |
|
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | |
|
| 66794 | octane oxidation | 100 | 3 of 3 | |
|
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | |
|
| 66794 | isoleucine metabolism | 100 | 8 of 8 | |
|
| 66794 | vitamin K metabolism | 100 | 5 of 5 | |
|
| 66794 | acetate fermentation | 100 | 4 of 4 | |
|
| 66794 | hydrogen production | 100 | 5 of 5 | |
|
| 66794 | taurine degradation | 100 | 1 of 1 | |
|
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | |
|
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | |
|
| 66794 | leucine metabolism | 92.31 | 12 of 13 | |
|
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | |
|
| 66794 | threonine metabolism | 90 | 9 of 10 | |
|
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | |
|
| 66794 | alanine metabolism | 89.66 | 26 of 29 | |
|
| 66794 | serine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | |
|
| 66794 | NAD metabolism | 88.89 | 16 of 18 | |
|
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | |
|
| 66794 | valine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | methionine metabolism | 88.46 | 23 of 26 | |
|
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | |
|
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | |
|
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | |
|
| 66794 | flavin biosynthesis | 86.67 | 13 of 15 | |
|
| 66794 | photosynthesis | 85.71 | 12 of 14 | |
|
| 66794 | heme metabolism | 85.71 | 12 of 14 | |
|
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | |
|
| 66794 | glycolysis | 82.35 | 14 of 17 | |
|
| 66794 | glutamate and glutamine metabolism | 82.14 | 23 of 28 | |
|
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | |
|
| 66794 | proline metabolism | 81.82 | 9 of 11 | |
|
| 66794 | d-xylose degradation | 81.82 | 9 of 11 | |
|
| 66794 | lipid metabolism | 80.65 | 25 of 31 | |
|
| 66794 | propionate fermentation | 80 | 8 of 10 | |
|
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | |
|
| 66794 | phenylacetate degradation (aerobic) | 80 | 4 of 5 | |
|
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | |
|
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | |
|
| 66794 | non-pathway related | 78.95 | 30 of 38 | |
|
| 66794 | tyrosine metabolism | 78.57 | 11 of 14 | |
|
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | |
|
| 66794 | nitrate assimilation | 77.78 | 7 of 9 | |
|
| 66794 | d-mannose degradation | 77.78 | 7 of 9 | |
|
| 66794 | purine metabolism | 77.66 | 73 of 94 | |
|
| 66794 | urea cycle | 76.92 | 10 of 13 | |
|
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | |
|
| 66794 | vitamin B12 metabolism | 76.47 | 26 of 34 | |
|
| 66794 | arginine metabolism | 75 | 18 of 24 | |
|
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | |
|
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | |
|
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | |
|
| 66794 | catecholamine biosynthesis | 75 | 3 of 4 | |
|
| 66794 | tryptophan metabolism | 73.68 | 28 of 38 | |
|
| 66794 | histidine metabolism | 72.41 | 21 of 29 | |
|
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | |
|
| 66794 | lysine metabolism | 71.43 | 30 of 42 | |
|
| 66794 | citric acid cycle | 71.43 | 10 of 14 | |
|
| 66794 | propanol degradation | 71.43 | 5 of 7 | |
|
| 66794 | pyrimidine metabolism | 71.11 | 32 of 45 | |
|
| 66794 | 4-hydroxyphenylacetate degradation | 70 | 7 of 10 | |
|
| 66794 | sulfate reduction | 69.23 | 9 of 13 | |
|
| 66794 | degradation of sugar alcohols | 68.75 | 11 of 16 | |
|
| 66794 | cyanate degradation | 66.67 | 2 of 3 | |
|
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | |
|
| 66794 | selenocysteine biosynthesis | 66.67 | 4 of 6 | |
|
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | |
|
| 66794 | degradation of pentoses | 64.29 | 18 of 28 | |
|
| 66794 | vitamin B6 metabolism | 63.64 | 7 of 11 | |
|
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | |
|
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | |
|
| 66794 | polyamine pathway | 60.87 | 14 of 23 | |
|
| 66794 | oxidative phosphorylation | 60.44 | 55 of 91 | |
|
| 66794 | myo-inositol biosynthesis | 60 | 6 of 10 | |
|
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | |
|
| 66794 | phenol degradation | 60 | 12 of 20 | |
|
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | |
|
| 66794 | 3-phenylpropionate degradation | 60 | 9 of 15 | |
|
| 66794 | gallate degradation | 60 | 3 of 5 | |
|
| 66794 | ascorbate metabolism | 59.09 | 13 of 22 | |
|
| 66794 | benzoyl-CoA degradation | 57.14 | 4 of 7 | |
|
| 66794 | degradation of sugar acids | 56 | 14 of 25 | |
|
| 66794 | daunorubicin biosynthesis | 55.56 | 5 of 9 | |
|
| 66794 | coenzyme M biosynthesis | 50 | 5 of 10 | |
|
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | |
|
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | |
|
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | |
|
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | |
|
| 66794 | glycine metabolism | 50 | 5 of 10 | |
|
| 66794 | toluene degradation | 50 | 2 of 4 | |
|
| 66794 | chlorophyll metabolism | 50 | 9 of 18 | |
|
| 66794 | androgen and estrogen metabolism | 50 | 8 of 16 | |
|
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | |
|
| 66794 | vitamin E metabolism | 50 | 2 of 4 | |
|
| 66794 | lactate fermentation | 50 | 2 of 4 | |
|
| 66794 | butanoate fermentation | 50 | 2 of 4 | |
|
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | |
|
| 66794 | resorcinol degradation | 50 | 1 of 2 | |
|
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | |
|
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | |
|
| 66794 | phenylpropanoid biosynthesis | 46.15 | 6 of 13 | |
|
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | |
|
| 66794 | 4-hydroxymandelate degradation | 44.44 | 4 of 9 | |
|
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | |
|
| 66794 | aclacinomycin biosynthesis | 42.86 | 3 of 7 | |
|
| 66794 | carotenoid biosynthesis | 40.91 | 9 of 22 | |
|
| 66794 | creatinine degradation | 40 | 2 of 5 | |
|
| 66794 | O-antigen biosynthesis | 40 | 2 of 5 | |
|
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | |
|
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | |
|
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | |
|
| 66794 | arachidonic acid metabolism | 38.89 | 7 of 18 | |
|
| 66794 | carnitine metabolism | 37.5 | 3 of 8 | |
|
| 66794 | methane metabolism | 33.33 | 1 of 3 | |
|
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | |
|
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | |
|
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | allantoin degradation | 33.33 | 3 of 9 | |
|
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | |
|
| 66794 | alginate biosynthesis | 25 | 1 of 4 | |
|
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | |
|
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 | |
Isolation, sampling and environmental information
Isolation
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 17230 | Soil with plant residues beneath Eugenia caryophyllata | Eugenia caryophyllata | near Cipajung | Indonesia | IDN | Asia |
Taxonmaps
Global distribution of 16S sequence AJ316014 (>99% sequence identity) for Sorangium cellulosum subclade from Microbeatlas 
 Aquatic Samples |
2417 |
 Soil Samples |
8839 |
 Animal Samples |
545 |
 Plant Samples |
2699 |
| Total Samples | 14500 |
Sequence information
Literature
Literature 
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Enzymology | Structural insights into oxidation of medium-chain fatty acids and flavanone by myxobacterial cytochrome P450 CYP267B1. | Jozwik IK, Litzenburger M, Khatri Y, Schifrin A, Girhard M, Urlacher V, Thunnissen AWH, Bernhardt R | Biochem J | 10.1042/BCJ20180402 | 2018 |  |
| Metabolism | Structure-Based Engineering of Steroidogenic CYP260A1 for Stereo- and Regioselective Hydroxylation of Progesterone. | Khatri Y, Jozwik IK, Ringle M, Ionescu IA, Litzenburger M, Hutter MC, Thunnissen AWH, Bernhardt R | ACS Chem Biol | 10.1021/acschembio.8b00026 | 2018 | |
| Enzymology | CYP260B1 acts as 9alpha-hydroxylase for 11-deoxycorticosterone. | Litzenburger M, Bernhardt R | Steroids | 10.1016/j.steroids.2017.08.006 | 2017 | |
| Metabolism | Structural characterization of CYP260A1 from Sorangium cellulosum to investigate the 1alpha-hydroxylation of a mineralocorticoid. | Khatri Y, Carius Y, Ringle M, Lancaster CR, Bernhardt R | FEBS Lett | 10.1002/1873-3468.12479 | 2016 | |
| Enzymology | Scrutiny of electrochemically-driven electrocatalysis of C-19 steroid 1alpha-hydroxylase (CYP260A1) from Sorangium cellulosum So ce56. | Kuzikov AV, Masamrekh RA, Khatri Y, Zavialova MG, Bernhardt R, Archakov AI, Shumyantseva VV | Anal Biochem | 10.1016/j.ab.2016.08.016 | 2016 | |
| Metabolism | A single terpene synthase is responsible for a wide variety of sesquiterpenes in Sorangium cellulosum Soce56. | Schifrin A, Khatri Y, Kirsch P, Thiel V, Schulz S, Bernhardt R | Org Biomol Chem | 10.1039/c6ob00130k | 2016 | |
| Enzymology | CYP267A1 and CYP267B1 from Sorangium cellulosum So ce56 are Highly Versatile Drug Metabolizers. | Kern F, Khatri Y, Litzenburger M, Bernhardt R | Drug Metab Dispos | 10.1124/dmd.115.068486 | 2016 | |
| Metabolism | Selective oxidation of carotenoid-derived aroma compounds by CYP260B1 and CYP267B1 from Sorangium cellulosum So ce56. | Litzenburger M, Bernhardt R | Appl Microbiol Biotechnol | 10.1007/s00253-015-7269-7 | 2016 | |
| Metabolism | Substrate Hunting for the Myxobacterial CYP260A1 Revealed New 1alpha-Hydroxylated Products from C-19 Steroids. | Khatri Y, Ringle M, Lisurek M, von Kries JP, Zapp J, Bernhardt R | Chembiochem | 10.1002/cbic.201500420 | 2015 | |
| Metabolism | New Sesquiterpene Oxidations with CYP260A1 and CYP264B1 from Sorangium cellulosum So ce56. | Schifrin A, Litzenburger M, Ringle M, Ly TT, Bernhardt R | Chembiochem | 10.1002/cbic.201500417 | 2015 | |
| Metabolism | Highly Efficient CYP167A1 (EpoK) dependent Epothilone B Formation and Production of 7-Ketone Epothilone D as a New Epothilone Derivative. | Kern F, Dier TK, Khatri Y, Ewen KM, Jacquot JP, Volmer DA, Bernhardt R | Sci Rep | 10.1038/srep14881 | 2015 | |
| Phylogeny | 30S Subunit-dependent activation of the Sorangium cellulosum So ce56 aminoglycoside resistance-conferring 16S rRNA methyltransferase Kmr. | Savic M, Sunita S, Zelinskaya N, Desai PM, Macmaster R, Vinal K, Conn GL | Antimicrob Agents Chemother | 10.1128/AAC.00056-15 | 2015 | |
| Metabolism | Conversions of tricyclic antidepressants and antipsychotics with selected P450s from Sorangium cellulosum So ce56. | Litzenburger M, Kern F, Khatri Y, Bernhardt R | Drug Metab Dispos | 10.1124/dmd.114.061937 | 2014 | |
| Metabolism | Characterization of the gene cluster CYP264B1-geoA from Sorangium cellulosum So ce56: biosynthesis of (+)-eremophilene and its hydroxylation. | Schifrin A, Ly TT, Gunnewich N, Zapp J, Thiel V, Schulz S, Hannemann F, Khatri Y, Bernhardt R | Chembiochem | 10.1002/cbic.201402443 | 2014 | |
| Metabolism | A natural heme-signature variant of CYP267A1 from Sorangium cellulosum So ce56 executes diverse omega-hydroxylation. | Khatri Y, Hannemann F, Girhard M, Kappl R, Hutter M, Urlacher VB, Bernhardt R | FEBS J | 10.1111/febs.13104 | 2014 | |
| Biotechnology | Novel family members of CYP109 from Sorangium cellulosum So ce56 exhibit characteristic biochemical and biophysical properties. | Khatri Y, Hannemann F, Girhard M, Kappl R, Meme A, Ringle M, Janocha S, Leize-Wagner E, Urlacher VB, Bernhardt R | Biotechnol Appl Biochem | 10.1002/bab.1087 | 2013 | |
| Metabolism | Application of a new versatile electron transfer system for cytochrome P450-based Escherichia coli whole-cell bioconversions. | Ringle M, Khatri Y, Zapp J, Hannemann F, Bernhardt R | Appl Microbiol Biotechnol | 10.1007/s00253-012-4612-0 | 2012 | |
| Metabolism | CYP264B1 from Sorangium cellulosum So ce56: a fascinating norisoprenoid and sesquiterpene hydroxylase. | Ly TT, Khatri Y, Zapp J, Hutter MC, Bernhardt R | Appl Microbiol Biotechnol | 10.1007/s00253-011-3727-z | 2012 | |
| Metabolism | Functional characterization of Fdx1: evidence for an evolutionary relationship between P450-type and ISC-type ferredoxins. | Ewen KM, Hannemann F, Iametti S, Morleo A, Bernhardt R | J Mol Biol | 10.1016/j.jmb.2011.09.010 | 2011 | |
| Enzymology | New feruloyl esterases to access phenolic acids from grass biomass. | Wu M, Abokitse K, Grosse S, Leisch H, Lau PC | Appl Biochem Biotechnol | 10.1007/s12010-011-9359-z | 2011 | |
| Genetics | Investigation of cytochromes P450 in myxobacteria: excavation of cytochromes P450 from the genome of Sorangium cellulosum So ce56. | Khatri Y, Hannemann F, Perlova O, Muller R, Bernhardt R | FEBS Lett | 10.1016/j.febslet.2011.04.035 | 2011 | |
| Metabolism | Unusual outer membrane lipid composition of the gram-negative, lipopolysaccharide-lacking myxobacterium Sorangium cellulosum So ce56. | Keck M, Gisch N, Moll H, Vorholter FJ, Gerth K, Kahmann U, Lissel M, Lindner B, Niehaus K, Holst O | J Biol Chem | 10.1074/jbc.M110.194209 | 2011 | |
| Metabolism | The CYPome of Sorangium cellulosum So ce56 and identification of CYP109D1 as a new fatty acid hydroxylase. | Khatri Y, Hannemann F, Ewen KM, Pistorius D, Perlova O, Kagawa N, Brachmann AO, Muller R, Bernhardt R | Chem Biol | 10.1016/j.chembiol.2010.10.010 | 2010 | |
| Enzymology | Characterization and engineering of a novel pyrroloquinoline quinone dependent glucose dehydrogenase from Sorangium cellulosum So ce56. | Hofer M, Bonsch K, Greiner-Stoffele T, Ballschmiter M | Mol Biotechnol | 10.1007/s12033-010-9339-5 | 2011 | |
| Metabolism | Regioselective hydroxylation of norisoprenoids by CYP109D1 from Sorangium cellulosum So ce56. | Khatri Y, Girhard M, Romankiewicz A, Ringle M, Hannemann F, Urlacher VB, Hutter MC, Bernhardt R | Appl Microbiol Biotechnol | 10.1007/s00253-010-2756-3 | 2010 | |
| Genetics | Genome mining in Sorangium cellulosum So ce56: identification and characterization of the homologous electron transfer proteins of a myxobacterial cytochrome P450. | Ewen KM, Hannemann F, Khatri Y, Perlova O, Kappl R, Krug D, Huttermann J, Muller R, Bernhardt R | J Biol Chem | 10.1074/jbc.M109.021717 | 2009 | |
| Metabolism | Investigation of the central carbon metabolism of Sorangium cellulosum: metabolic network reconstruction and quantification of pathway fluxes. | Bolten CJ, Heinzle E, Muller R, Wittmann C | J Microbiol Biotechnol | 8179 | 2009 | |
| Metabolism | Establishment of a high content assay for the identification and characterisation of bioactivities in crude bacterial extracts that interfere with the eukaryotic cell cycle. | Jensen NA, Gerth K, Grotjohann T, Kapp D, Keck M, Niehaus K | J Biotechnol | 10.1016/j.jbiotec.2008.12.002 | 2008 | |
| Metabolism | NtcA: a negative regulator of secondary metabolite biosynthesis in Sorangium cellulosum. | Rachid S, Gerth K, Muller R | J Biotechnol | 10.1016/j.jbiotec.2008.10.010 | 2008 | |
| Metabolism | Mutation in the rel gene of Sorangium cellulosum affects morphological and physiological differentiation. | Knauber T, Doss SD, Gerth K, Perlova O, Muller R, Treuner-Lange A | Mol Microbiol | 10.1111/j.1365-2958.2008.06285.x | 2008 | |
| Genetics | Complete genome sequence of the myxobacterium Sorangium cellulosum. | Schneiker S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, Bolten CJ, Choudhuri JV, Doss S, Elnakady YA, Frank B, Gaigalat L, Goesmann A, Groeger C, Gross F, Jelsbak L, Jelsbak L, Kalinowski J, Kegler C, Knauber T, Konietzny S, Kopp M, Krause L, Krug D, Linke B, Mahmud T, Martinez-Arias R, McHardy AC, Merai M, Meyer F, Mormann S, Munoz-Dorado J, Perez J, Pradella S, Rachid S, Raddatz G, Rosenau F, Ruckert C, Sasse F, Scharfe M, Schuster SC, Suen G, Treuner-Lange A, Velicer GJ, Vorholter FJ, Weissman KJ, Welch RD, Wenzel SC, Whitworth DE, Wilhelm S, Wittmann C, Blocker H, Puhler A, Muller R | Nat Biotechnol | 10.1038/nbt1354 | 2007 | |
| Metabolism | Deciphering regulatory mechanisms for secondary metabolite production in the myxobacterium Sorangium cellulosum So ce56. | Rachid S, Gerth K, Kochems I, Muller R | Mol Microbiol | 10.1111/j.1365-2958.2007.05627.x | 2007 | |
| Metabolism | Metabolic engineering of Pseudomonas putida for methylmalonyl-CoA biosynthesis to enable complex heterologous secondary metabolite formation. | Gross F, Ring MW, Perlova O, Fu J, Schneider S, Gerth K, Kuhlmann S, Stewart AF, Zhang Y, Muller R | Chem Biol | 10.1016/j.chembiol.2006.09.014 | 2006 | |
| Metabolism | Establishment of a real-time PCR protocol for expression studies of secondary metabolite biosynthetic gene clusters in the G/C-rich myxobacterium Sorangium cellulosum So ce56. | Kegler C, Gerth K, Muller R | J Biotechnol | 10.1016/j.jbiotec.2005.10.007 | 2005 | |
| Cultivation | Development of simple media which allow investigations into the global regulation of chivosazol biosynthesis with Sorangium cellulosum So ce56. | Muller R, Gerth K | J Biotechnol | 10.1016/j.jbiotec.2005.10.012 | 2006 | |
| Metabolism | Identification and analysis of the chivosazol biosynthetic gene cluster from the myxobacterial model strain Sorangium cellulosum So ce56. | Perlova O, Gerth K, Kaiser O, Hans A, Muller R | J Biotechnol | 10.1016/j.jbiotec.2005.10.011 | 2005 | |
| Metabolism | Novel insights into siderophore formation in myxobacteria. | Gaitatzis N, Kunze B, Muller R | Chembiochem | 10.1002/cbic.200400206 | 2005 | |
| Metabolism | Critical variations of conjugational DNA transfer into secondary metabolite multiproducing Sorangium cellulosum strains So ce12 and So ce56: development of a mariner-based transposon mutagenesis system. | Kopp M, Irschik H, Gross F, Perlova O, Sandmann A, Gerth K, Muller R | J Biotechnol | 10.1016/j.jbiotec.2003.09.013 | 2004 | |
| Metabolism | Myxobacteria: proficient producers of novel natural products with various biological activities--past and future biotechnological aspects with the focus on the genus Sorangium. | Gerth K, Pradella S, Perlova O, Beyer S, Muller R | J Biotechnol | 10.1016/j.jbiotec.2003.07.015 | 2003 | |
| Genetics | Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique. | Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Puhler A, Meyer F | J Biotechnol | 10.1016/j.jbiotec.2003.08.008 | 2003 | |
| Phylogeny | Characterisation, genome size and genetic manipulation of the myxobacterium Sorangium cellulosum So ce56. | Pradella S, Hans A, Sproer C, Reichenbach H, Gerth K, Beyer S | Arch Microbiol | 10.1007/s00203-002-0479-2 | 2002 | |
How to cite
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive12490.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain dataIsabel Schober, Julia Koblitz, Joaquim Sardà Carbasse, Christian Ebeling, Marvin Leon Schmidt, Adam Podstawka, Rohit Gupta, Vinodh Ilangovan, Javad Chamanara, Jörg Overmann, Lorenz Christian Reimer
Nucleic Acids Research; database issue 2025.
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