Name: Bacillus sonorensis L87-10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1201

Type strain:

Species: Bacillus sonorensis

Strain Designation: L87-10, TG8-8

Culture col. no.: DSM 13779, NRRL B-23154, JCM 12232, CIP 107271, KCTC 13918, NBRC 101234

Strain history: CIP <- 2001, L.K. Nakamura, Peoria USA: strain TG8-8

NCBI tax ID(s): 1220591 (strain), 119858 (species)

SI-ID 49523

DSM 13779, NRRL B-23154, LMG 21636, KCTC 13918, NCIMB 13912, NRRL 23154, CIP 107271, NBRC 101234, BCRC 17416, CCRC 17416, JCM 12232

Other strains from Bacillus sonorensis

B. sonorensis L89-9, DSM 13780, NRRL B-23156
B. sonorensis Stev49, DSM 103057

Section

Bacillus sonorensis L87-10 is a facultative anaerobe, spore-forming, mesophilic bacterium that forms irregular colonies and was isolated from desert Soil at Tumamoc Hill in the Sonoran Desert.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Species	**Bacillus sonorensis**
	Full Scientific Name (LPSN)	Bacillus sonorensis Palmisano et al. 2001

Information on morphological and physiological properties Morphology

[Ref.: #23306]	Gram stain	positive
[Ref.: #122679]	Gram stain	positive

[Ref.: #23306]	Cell length	2-5 µm

[Ref.: #23306]	Cell width	1.0 µm

[Ref.: #23306]	Cell shape	rod-shaped
[Ref.: #122679]	Cell shape	rod-shaped

[Ref.: #23306]	Motility	yes
[Ref.: #122679]	Motility	yes

[Ref.: #122679]	Hemolysis ability	1

[Ref.: #23306]	Colony size	2-4 mm
[Ref.: #23306]	Colony color	yellowish-cream
[Ref.: #23306]	Colony shape	irregular
[Ref.: #23306]	Incubation period	2 days
[Ref.: #23306]	Cultivation medium used	TBAB agar

[Ref.: #23306]	Colony color	bright yellow
[Ref.: #23306]	Cultivation medium used	pH 5.6 agar

[Ref.: #23306]	Colony color	brown
[Ref.: #23306]	Cultivation medium used	Tyrosine agar

[Ref.: #23306]	Colony color	pale yellowish-cream
[Ref.: #23306]	Cultivation medium used	Glycerol/Glutamate agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5162]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5162]

Culture medium growth

[Ref.: #5162]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5162]

Culture medium composition

expand / minimize

[Ref.: #23306]

Culture medium

Glycerol/Glutamate agar

[Ref.: #23306]

Culture medium growth

[Ref.: #23306]

Culture medium

pH 5.6 agar

[Ref.: #23306]

Culture medium growth

[Ref.: #23306]

Culture medium

TBAB agar

[Ref.: #23306]

Culture medium growth

[Ref.: #23306]

Culture medium

Tyrosine agar

[Ref.: #23306]

Culture medium growth

[Ref.: #37511]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37511]

Culture medium growth

[Ref.: #37511]

Culture medium composition

expand / minimize

[Ref.: #122679]

Culture medium

CIP Medium 72

[Ref.: #122679]

Culture medium growth

[Ref.: #122679]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5162]		growth	30 °C
[Ref.: #23306]		maximum	55 °C
[Ref.: #23306]		minimum	15 °C
[Ref.: #37511]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #122679]		growth	22-55 °C
[Ref.: #122679]	no	growth	10 °C

[Ref.: #5162]	Temperature range	mesophilic
[Ref.: #23306]	Temperature range	thermophilic
[Ref.: #23306]	Temperature range	psychrophilic
[Ref.: #37511]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #122679]	Temperature range	psychrophilic

	pH	Kind of pH		pH
[Ref.: #23306]			growth	5.7
[Ref.: #122679]			growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23306]	Oxygen tolerance	facultative anaerobe
[Ref.: #122679]	Oxygen tolerance	facultative anaerobe

[Ref.: #23306]	Spore description	unswollen sporangia (1.5-2.0 µm long and 1.0 µm wide), ellipsoidal, subterminal
[Ref.: #23306]	Type of spore	endospore
[Ref.: #23306]	Ability of spore formation	yes
[Ref.: #122679]	Ability of spore formation	yes

	Salt	Tested relation		Salt conc.
[Ref.: #23306]	NaCl		growth	3	%
[Ref.: #23306]	NaCl	no	growth	5	%
[Ref.: #23306]	NaCl	no	growth	7	%
[Ref.: #23306]	NaCl	no	growth	10	%
[Ref.: #122679]	NaCl		growth	0-8	%
[Ref.: #122679]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	arabinose ChEBI	+	builds acid from
[Ref.: #68371]	arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	casein	+	degradation
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	citrate ChEBI	+	assimilation
[Ref.: #122679]	citrate ChEBI	-	carbon source
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23306]	egg yolk	-	assimilation
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122679]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23306]	glucose ChEBI	+	builds acid from
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #122679]	hippurate ChEBI	+	hydrolysis
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	mannitol ChEBI	+	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	nitrate ChEBI	+	reduction
[Ref.: #122679]	nitrate ChEBI	+	reduction
[Ref.: #122679]	nitrate ChEBI	+	respiration
[Ref.: #122679]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23306]	propionate ChEBI	+	assimilation
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	starch ChEBI	+	hydrolysis
[Ref.: #68371]	starch ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23306]	tyrosine ChEBI	-	degradation
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23306]	xylose ChEBI	+	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #23306]		acetoin ChEBI	yes
[Ref.: #122679]		indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #23306]	acetoin ChEBI	+
[Ref.: #122679]	acetoin ChEBI	+
[Ref.: #122679]	glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #122679]	alcohol dehydrogenase	+	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122679]	amylase	+
[Ref.: #122679]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122679]	caseinase	+	3.4.21.50
[Ref.: #23306]	catalase	+	1.11.1.6
[Ref.: #122679]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #122679]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #122679]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #122679]	gelatinase	+/-
[Ref.: #122679]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #122679]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #122679]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #122679]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122679]	oxidase	-
[Ref.: #122679]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122679]	tween esterase	-
[Ref.: #122679]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #122679]	10917	not determinedn.d.	+	-	-	+	+	-	-	-	-	+	+	+	+	-	+	-	+/-	+	+/-	-	+	+	+	+	+	+	+	+	-	-	+	+	-	-	-	+	+/-	-	+	+	-	+	-	-	-	-	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #122679]	2121	not determinedn.d.	+	+	+	+	+	-	-	+	-	+	+	+	+	-	-	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	+	+	+	+	+	+	+	-	-	-	-	+	-	+	+	-	-	+	+	+	+	-	-	+	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	+	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122679]	10218	-	+	+	+	-	-	-	-	-	-	+	+	-	+	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23306]	Sample type/isolated from	desert Soil at Tumamoc Hill in the Sonoran Desert
[Ref.: #23306]	Geographic location (country and/or sea, region)	Arizona
[Ref.: #23306]	Country	USA
[Ref.: #23306]	Country ISO 3 Code	USA
[Ref.: #23306]	Continent	North America

[Ref.: #5162]	Sample type/isolated from	soil
[Ref.: #5162]	Geographic location (country and/or sea, region)	Tumanoc Hill, Sonora Desert, Arizona
[Ref.: #5162]	Country	USA
[Ref.: #5162]	Country ISO 3 Code	USA
[Ref.: #5162]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Sonoran Desert soil

[Ref.: #122679]	Sample type/isolated from	Environment, Soil
[Ref.: #122679]	Geographic location (country and/or sea, region)	Sonoran desert, Tucson, Arizona
[Ref.: #122679]	Country	United States of America
[Ref.: #122679]	Country ISO 3 Code	USA
[Ref.: #122679]	Continent	North America
[Ref.: #122679]	Isolation date	1987
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF302118 (>99% sequence identity) for Bacillus licheniformis from Microbeatlas

Aquatic Samples	736
Soil Samples	475
Animal Samples	1197
Plant Samples	131
Total Samples	2539

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5162]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122679]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5162]	Bacillus sonorensis strain NRRL B-23154 16S ribosomal RNA gene, partial sequence	AF302118	1410	ENA	119858 tax ID
[Ref.: #20218]	Bacillus sonorensis strain NRRL B-23154 16S ribosomal RNA gene, partial sequence	EU138473	1169	ENA	119858 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacillus sonorensis NBRC 101234 = KCTC 13918 KCTC 13918(T)	GCA_000507125	contig	GenBank	1220591 tax ID
[Ref.: #67770]	Bacillus sonorensis NBRC 101234 = KCTC 13918	GCA_001592005	contig	GenBank	1220591 tax ID
[Ref.: #66792]	Bacillus sonorensis NBRC 101234 = KCTC 13918	1220591.4	wgs	PATRIC	1220591 tax ID	*
[Ref.: #66792]	Bacillus sonorensis NBRC 101234 = KCTC 13918	1220591.6	wgs	PATRIC	1220591 tax ID	*
[Ref.: #66792]	Bacillus sonorensis NBRC 101234, KCTC 13918	2731957676	draft	JGI IMG/M	1220591 tax ID	*
[Ref.: #66792]	Bacillus sonorensis NBRC 101234, KCTC 13918	2571042128	draft	JGI IMG/M	1220591 tax ID	*

[Ref.: #23306]	GC-content	46.00 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	46 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus sonorensis NBRC 101234 = KCTC 13918 PATRIC: 1220591.4
[Ref.: #69480]	motile	yes	89.885	no
[Ref.: #69480]	gram-positive	yes	91.017	no
[Ref.: #69480]	anaerobic	no	98.823	no
[Ref.: #69480]	aerobic	yes	80.865	yes
[Ref.: #69480]	halophile	yes	64.719	no
[Ref.: #69480]	spore-forming	yes	96.825	yes
[Ref.: #69480]	glucose-util	yes	89.479	no
[Ref.: #69480]	flagellated	yes	85.221	no
[Ref.: #69480]	thermophile	no	97.547	no
[Ref.: #69480]	glucose-ferment	no	87.559	no

Availability in culture collections External links

[Ref.: #5162]

Culture collection no.

DSM 13779, NRRL B-23154, JCM 12232, CIP 107271, KCTC 13918, NBRC 101234

[Ref.: #70857]

SI-ID 49523

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus piscis sp. nov., a novel bacterium isolated from the muscle of the antarctic fish Dissostichus mawsoni.	Lee JB, Jeon SH, Choi SG, Jung HY, Kim MK, Srinivasan S	J Microbiol	10.1007/s12275-016-6473-1	2016	*
Phylogeny	A novel EPS-producing strain of Bacillus licheniformis isolated from a shallow vent off Panarea Island (Italy).	Spano A, Gugliandolo C, Lentini V, Maugeri TL, Anzelmo G, Poli A, Nicolaus B	Curr Microbiol	10.1007/s00284-013-0327-4	2013	*
Phylogeny	Bacillus sonorensis sp. nov., a close relative of Bacillus licheniformis, isolated from soil in the Sonoran Desert, Arizona.	Palmisano MM, Nakamura LK, Duncan KE, Istock CA, Cohan FM	Int J Syst Evol Microbiol	10.1099/00207713-51-5-1671	2001	*
	Probiotic-Mediated Biosynthesis of Silver Nanoparticles and Their Antibacterial Applications against Pathogenic Strains of Escherichia coli O157:H7.	Wang X, Lee SY, Akter S, Huq MA	Polymers (Basel)	10.3390/polym14091834	2022	*

References

#5162

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13779

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23306

M M Palmisano, L K Nakamura, K E Duncan, C A Istock, F M Cohan: Bacillus sonorensis sp. nov., a close relative of Bacillus licheniformis, isolated from soil in the Sonoran Desert, Arizona.. IJSEM 51: 1671 - 1679 2001 ( DOI 10.1099/00207713-51-5-1671 , PubMed 11594594 )

#37511 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70857

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49523.1 )

#122679 Collection of Institut Pasteur ; Curators of the CIP; CIP 107271
* These data were automatically processed and therefore are not curated

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Bacillus sonorensis NBRC 101234 = KCTC 13918

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