Sporosarcina newyorkensis (DSM 23543, CCUG 59650, LMG 26021)

Name: Sporosarcina newyorkensis (DSM 23543, CCUG 59650, LMG 26021)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12005

Type strain

Strain Designation 5868

Culture col. no. DSM 23543 CCUG 59650 LMG 26021 5868

NCBI tax ID(s) 759851

Special Collections DSMZ CCUG

History <- W. J. Wolfgang, Wadsworth Center, NYS Dept. Health, USA; strain 5868 <- Erie County Medical Center

Links

Sporosarcina newyorkensis 5868 is an aerobe, mesophilic prokaryote that was isolated from clinical specimen, eye of a 30-year-old woman.

aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 393773

LMG 26021,DSM 23543

@ref 20215

Last LPSN update 2026-02-09 11:20:43

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Caryophanaceae

Genus Sporosarcina

Species Sporosarcina newyorkensis

Full scientific name Sporosarcina newyorkensis Wolfgang et al. 2012

BacDive ID	Other strains from **Sporosarcina newyorkensis** (5)	Type strain
12006	S. newyorkensis 6062, DSM 23544, CCUG 59649, LMG 26022 (type strain)
12002	S. newyorkensis 2681, DSM 23540, CCUG 59651, LMG 26024
12003	S. newyorkensis 1655, DSM 23541, CCUG 59648, LMG 26023
12004	S. newyorkensis 4331, DSM 23542, CCUG 59647, LMG 26020
12007	S. newyorkensis R-31323, DSM 23966, CCUG 60203, LMG 26025

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17271	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l MnSO4 0.01 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
17271	positive	growth	37	mesophilic
62056	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

62056

Oxygen toleranceaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Medical environment	#Clinic
#Infection	#Patient	-
#Infection	#Patient	#Specimen
#Host Body-Site	#Organ	#Eye
#Host	#Human	#Female

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
17271	clinical specimen, eye of a 30-year-old woman		New York State, Erie County	USA	USA	North America
62056	Human clinical sample	2008-10-02	Buffalo,New York State	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence GU994087 (>99% sequence identity) for Sporosarcina newyorkensis subclade from Microbeatlas

Aquatic Samples	72
Soil Samples	150
Animal Samples	410
Plant Samples	15
Total Samples	647

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17271	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score
66792	Sporosarcina newyorkensis DSM 23543	complete	2596583686	759851	74.76

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17271	Sporosarcina newyorkensis strain 5868 16S ribosomal RNA gene, partial sequence	GU994087	1474		759851

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
Phenotypic Characterization and Draft Genome Sequence Analyses of Two Novel Endospore-Forming Sporosarcina spp. Isolated from Canada Goose (Branta canadensis) Feces.	Keshri J, Smith KM, Svendsen MK, Keillor HR, Moss ML, Jordan HJ, Larkin AM, Garrish JK, Line JE, Ball PN, Oakley BB, Seal BS.	Microorganisms	10.3390/microorganisms12010070	2023

References

#17271	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23543
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#62056	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 59650
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sporosarcina newyorkensis (DSM 23543, CCUG 59650, LMG 26021)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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