Name: Sporosarcina newyorkensis 1655
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12003

Type strain:

Species: Sporosarcina newyorkensis

Strain Designation: 1655

Culture col. no.: DSM 23541, CCUG 59648, LMG 26023

Strain history: <- W. J. Wolfgang, Wadsworth Center, NYS Dept. of Health, Albany, USA; strain 1655 <- Lourdes Hospital, Binghamton, USA

NCBI tax ID(s): 759851 (species)

SI-ID 393774

LMG 26023, DSM 23541

Special Collections

DSMZ
CCUG

Other strains from Sporosarcina newyorkensis

Section

Sporosarcina newyorkensis 1655 is an aerobe bacterium that was isolated from clinical specimen, blood of a 93-year-old woman.

aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Sporosarcina*
	Species	**Sporosarcina newyorkensis**
	Full Scientific Name (LPSN)	Sporosarcina newyorkensis Wolfgang et al. 2012

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17269]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #17269]

Culture medium growth

[Ref.: #17269]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17269]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17269]			growth	37 °C
[Ref.: #62054]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62054]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17269]	Sample type/isolated from	clinical specimen, blood of a 93-year-old woman
[Ref.: #17269]	Geographic location (country and/or sea, region)	New York State
[Ref.: #17269]	Country	USA
[Ref.: #17269]	Country ISO 3 Code	USA
[Ref.: #17269]	Continent	North America

[Ref.: #62054]	Sample type/isolated from	Clinical sample
[Ref.: #62054]	Sampling date	2009-03-31
[Ref.: #62054]	Geographic location (country and/or sea, region)	Binghampton,New York State
[Ref.: #62054]	Country	USA
[Ref.: #62054]	Country ISO 3 Code	USA
[Ref.: #62054]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Medical environment	#Clinic
#Infection	#Patient	-
#Infection	#Patient	#Specimen
#Host Body Product	#Fluids	#Blood
#Host	#Human	#Female

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence GU994079 (>99% sequence identity) for Sporosarcina newyorkensis subclade from Microbeatlas

Aquatic Samples	72
Soil Samples	150
Animal Samples	410
Plant Samples	15
Total Samples	647

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17269]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17269]	Sporosarcina newyorkensis strain 1655 16S ribosomal RNA gene, partial sequence	GU994079	1474	GenBank ENA	759851 tax ID

Availability in culture collections External links

[Ref.: #17269]

Culture collection no.

DSM 23541, CCUG 59648, LMG 26023

[Ref.: #81219]	SI-ID 393774	*
[Ref.: #81220]	SI-ID 410951	*

References

#17269

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23541

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#62054 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 59648

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#81219

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID393774.1 )

#81220

* These data were automatically processed and therefore are not curated

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