Name: Telmatocola sphagniphila SP2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11948

Type strain:

Species: Telmatocola sphagniphila

Strain Designation: SP2

Culture col. no.: DSM 23888, VKM B-2710

Strain history: <- S. N. Dedysh, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; SP2 <- I. S. Kulichevskaya

NCBI tax ID(s): 1123043 (species)

SI-ID 401017

DSM 23888

Section

Telmatocola sphagniphila SP2 is a mesophilic bacterium that was isolated from ombrotrophic Sphagnum peat bog.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Planctomycetota*
	Class	*Planctomycetia*
	Order	*Gemmatales*
	Family	*Gemmataceae*
	Genus	*Telmatocola*
	Species	**Telmatocola sphagniphila**
	Full Scientific Name (LPSN)	Telmatocola sphagniphila Kulichevskaya et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #17423]

Incubation period

>14 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17423]

Culture medium

TELMATOCOLA MEDIUM (DSMZ Medium 1367)

[Ref.: #17423]

Culture medium growth

[Ref.: #17423]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17423]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17423]			growth	25 °C

[Ref.: #17423]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17423]	Sample type/isolated from	ombrotrophic Sphagnum peat bog
[Ref.: #17423]	Host species	Sphagnum
[Ref.: #17423]	Geographic location (country and/or sea, region)	Tver region, Staroselsky moss (56°34'N, 32°46'E)
[Ref.: #17423]	Country	Russia
[Ref.: #17423]	Country ISO 3 Code	RUS
[Ref.: #17423]	Continent	Europe
[Ref.: #17423]	Geographic location	56.5667°/32.7667°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Wetland (Swamp)
#Host	#Plants	#Peat moss

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JN880417 (>99% sequence identity) for Telmatocola sphagniphila subclade from Microbeatlas

Aquatic Samples	160
Soil Samples	365
Animal Samples	23
Plant Samples	83
Total Samples	631

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17423]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17423]	Telmatocola sphagniphila strain SP2 16S ribosomal RNA gene, partial sequence	JN880417	1422	ENA	1123043 tax ID

[Ref.: #17423]

GC-content

58.5 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #17423]

Culture collection no.

DSM 23888, VKM B-2710

[Ref.: #81161]

SI-ID 401017

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Telmatocola sphagniphila gen. nov., sp. nov., a novel dendriform planctomycete from northern wetlands.	Kulichevskaya IS, Serkebaeva YM, Kim Y, Rijpstra WI, Damste JS, Liesack W, Dedysh SN	Front Microbiol	10.3389/fmicb.2012.00146	2012	*

References

#17423

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23888

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#81161

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401017.1 )

* These data were automatically processed and therefore are not curated

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