Name: Galenea microaerophila P2D
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11934

Type strain:

Species: Galenea microaerophila

Strain Designation: P2D

Culture col. no.: DSM 24963, JCM 17795

Strain history: C. Vetriani P2D.

NCBI tax ID(s): 1136073 (species)

Section

Galenea microaerophila P2D is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from sediment of shallow hydrothermal vent orifice, 12 m depth.

Gram-negative
motile
rod-shaped
mesophilic
microaerophile
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	Thiotrichales
	Family	*Piscirickettsiaceae*
	Genus	*Galenea*
	Species	**Galenea microaerophila**
	Full Scientific Name (PNU)	Galenea microaerophila Giovannelli et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30635]	Gram stain	negative
[Ref.: #30635]	Cell length	1 µm
[Ref.: #30635]	Cell width	0.45 µm
[Ref.: #30635]	Cell shape	rod-shaped
[Ref.: #30635]	Motility	yes

[Ref.: #17810]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17810]

Culture medium

GALENEA MJ MEDIUM (CO2) (DSMZ Medium 1011d)

[Ref.: #17810]

Culture medium growth

[Ref.: #17810]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #17810]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #17810]	growth	35 °C
[Ref.: #30635]	growth	20-55 °C
[Ref.: #30635]	optimum	35 °C
[Ref.: #67770]	growth	35 °C

[Ref.: #17810]	Temperature range	mesophilic
[Ref.: #30635]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30635]			optimum	5.5
[Ref.: #30635]			growth	4.5-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #17810]	Oxygen tolerance	microaerophile
[Ref.: #30635]	Oxygen tolerance	microaerophile

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30635]		NaCl		growth	1.5-4.5	%
[Ref.: #30635]		NaCl		optimum	3	%

[Ref.: #67770]

Observation

quinones: Q-8

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30635]		glucose ChEBI	+	carbon source
[Ref.: #30635]		sucrose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17810]	Sample type/isolated from	sediment of shallow hydrothermal vent orifice, 12 m depth
[Ref.: #17810]	Geographic location (country and/or sea, region)	Milos Island, Paleochori Bay
[Ref.: #17810]	Country	Greece
[Ref.: #17810]	Country ISO 3 Code	GRC
[Ref.: #17810]	Continent	Europe
[Ref.: #17810]	Geographic location	36.6725°/24.5185°

[Ref.: #67770]	Sample type/isolated from	Active shallow-water hydrothermal vent in Paleochori Bay on the Greek island of Milos
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Sediment
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ080912 (>99% sequence identity) for Galenea microaerophila subclade from Microbeatlas

Aquatic Samples	114
Soil Samples	3
Animal Samples	53
Plant Samples
Total Samples	170

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17810]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17810]	Galenea microaerophila strain P2D 16S ribosomal RNA gene, partial sequence	JQ080912	1449	ENA	1136073 tax ID

[Ref.: #17810]	GC-content	44.9 mol%	high performance liquid chromatography (HPLC)
[Ref.: #30635]	GC-content	44.9 mol%

Availability in culture collections External links

[Ref.: #17810]

Culture collection no.

DSM 24963, JCM 17795

[Ref.: #20218]

Associated Passport(s) in StrainInfo

876833, 876834

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Galenea microaerophila gen. nov., sp. nov., a mesophilic, microaerophilic, chemosynthetic, thiosulfate-oxidizing bacterium isolated from a shallow-water hydrothermal vent.	Giovannelli D, Grosche A, Starovoytov V, Yakimov M, Manini E, Vetriani C	Int J Syst Evol Microbiol	10.1099/ijs.0.040808-0	2012	*

References

#17810

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24963

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30635

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26966 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#26966

IJSEM 3060 2012 ( DOI 10.1099/ijs.0.040808-0 , PubMed 22307509 )

* These data were automatically processed and therefore are not curated

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