Bacillus spizizenii 231 is an aerobe, spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from Collected before 1952.
antibiotic compound production spore-forming Gram-positive motile rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Bacillaceae |
| Genus Bacillus |
| Species Bacillus spizizenii |
| Full scientific name Bacillus spizizenii (Nakamura et al. 1999) Dunlap et al. 2020 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 41811 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 140 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 123358 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Ability | Type | PH | |
|---|---|---|---|---|
| 123358 | positive | growth | 6 |
| Test 1 | Test 2 | Test 3 | Test 4 | Test 5 | Test 6 | Test 7 | Test 8 | Test 9 | Test 10 | Test 11 | Test 12 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| @ref | 140 | 140 | 140 | 140 | 140 | 140 | 140 | 140 | 140 | 140 | 140 | 140 |
| Medium | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller Hinton | Mueller-Hinton Agar | Müller-Hinton Agar | Müller-Hinton Agar | Müller-Hinton Agar |
| Manual annotation | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | |
| Amikacin 30µg (disc) | 30 | 30 | 30-32 | 30 | 30 | 30 | 30 | 28 | 28 | 32 | 30 | 32 |
| Ampicillin 10µg (disc) | 36 | 36-38 | 40 | 40 | 38 | 36-38 | 36-38 | 38 | 38 | 40 | 36 | 38-40 |
| Aztreonam 30µg (disc) | 12 | 14-16 | 10-12 | 12 | 12 | 16 | 16 | 16 | 14 | 12 | 12 | 0 |
| Bacitracin 10Unit | 14-16 | 8 | 10 | 10 | 8 | 6 | 6 | 6 | 6 | n.d. | n.d. | n.d. |
| Cefalotin 30µg (disc) | 48 | 46 | 50 | 50 | 44 | 48 | 48 | 48 | 48 | n.d. | n.d. | n.d. |
| Cefazolin 30µg (disc) | 42 | 42 | 42 | 42 | 40 | 40-42 | 40-42 | 42 | 42 | n.d. | n.d. | n.d. |
| Cefiderocol 30µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 20 | 12 | 14 |
| Cefotaxime 30µg (disc) | 38-40 | 40 | 38-40 | 40 | 36 | 38 | 38 | 40 | 40 | 42 | 34 | 38 |
| Ceftazidime 10µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 26 | 18 | 22 |
| Ceftriaxone 30µg (disc) | 34 | 34-36 | 36 | 36-38 | n.d. | 34 | 34 | 36-38 | 36-38 | 40 | 32 | 36 |
| Chloramphenicol 30µg (disc) | 34 | 34-36 | 36 | 38 | 32 | 36 | 36 | 34 | 38-40 | 40 | 36 | 36-38 |
| Ciprofloxacin 5µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 44 | 40 | 42 |
| Clindamycin 10µg (disc) | 32 | 32 | 32-34 | 32 | n.d. | 34 | 34 | 30 | 34-36 | 36-38 | 30-32 | 34 |
| Colistin 10µg (disc) | 10 | 10 | 12 | 10 | 10 | 10 | 10 | 8 | 10 | n.d. | n.d. | n.d. |
| Colistin sulphate 10µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 10 | 10-12 | 12 |
| Doxycycline 30µg (disc) | 36 | 38-40 | 38-40 | 40 | 36 | 40 | 40 | 40 | 40 | n.d. | n.d. | n.d. |
| Erythromycin 15µg (disc) | 34 | 32-34 | 36 | 36-38 | 32 | 34 | 34 | 32 | 38 | 38-40 | 34 | 38 |
| Fosfomycin 50µg (disc) | 10 | 14 | 6-8 | 8 | n.d. | 0 | 0 | 8-10 | 10 | 24 | 0 | 24 |
| Gentamicin 10µg (disc) | 28 | 26 | 28-30 | 30 | 30 | 30 | 30 | 26 | 26 | n.d. | n.d. | n.d. |
| Gentamicin 30µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 34 | 28 | 32-34 |
| Imipenem 10µg (disc) | 48 | 50 | 50 | 50 | 46 | 50 | 50 | 48 | 48 | 50 | 48 | 48 |
| Kanamycin 30µg (disc) | 30 | 30 | 32 | 32 | 30 | 32 | 32 | 30 | 30 | 36 | 32 | 36 |
| Levofloxacin 5µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 42 | 38 | 40 |
| Lincomycin 15µg (disc) | 20 | 20 | 22 | 22 | 16 | 22 | 22 | 16-18 | 22-24 | n.d. | n.d. | n.d. |
| Linezolid 10µg (disc) | 36 | 36 | 40 | 40 | n.d. | 40 | 40 | 40 | 42-44 | 42 | 40 | 40 |
| Meropenem 10µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 42 | 38-40 | 40 |
| Mezlocillin 30µg (disc) | 32-34 | 32 | 32-34 | 36 | 32 | 32 | 32 | 34 | 32 | n.d. | n.d. | n.d. |
| Moxifloxacin 5µg (disc) | 40 | 38 | 40 | 40 | n.d. | 40 | 40 | 40 | 40 | 44-46 | 40 | 42 |
| Neomycin 30µg (disc) | 24 | 22-24 | 26 | 24 | 22 | 24 | 24 | 24 | 24 | n.d. | n.d. | n.d. |
| Nitrofurantoin 100µg (disc) | 24 | 22 | 22 | 24 | 22 | 24 | 24 | 28 | 26 | 30 | 24 | 26 |
| Norfloxacin 10µg (disc) | 34 | 34 | 36 | 38 | 34 | 34-36 | 34-36 | 34 | 34 | n.d. | n.d. | n.d. |
| Nystatin 100Unit | 0 | 0 | 0 | 0 | n.d. | 0 | 0 | 0 | 0 | n.d. | n.d. | n.d. |
| Ofloxacin 5µg (disc) | 36 | 34 | 36 | 36 | 34 | 36 | 36 | 36 | 36 | 40 | 36 | 40 |
| Oxacillin 5µg (disc) | 32 | 32 | 32-34 | 34 | 32 | 32 | 32 | 34 | 34 | 36 | 30 | 34 |
| Penicillin G 6µg (disc) | 38 | 38 | 40 | 40 | 38 | 36-38 | 36-38 | 40 | 40 | 40 | 36 | 40 |
| Pipemidic acid 20µg (disc) | 24 | 24 | 26 | 28 | 24 | 26 | 26 | 26 | 24-26 | n.d. | n.d. | n.d. |
| Piperacillin/Tazobactam 40µg (disc) | 34 | 34 | 34 | 36 | n.d. | 34 | 34 | 34 | 34 | n.d. | n.d. | n.d. |
| Piperacillin/Tazobactam 110µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 40 | 32-34 | 40 |
| Polymyxin B 300Unit | 14 | 12 | 16 | 14 | 12 | 14 | 14 | 12 | 16 | 18 | 14 | 18-20 |
| Quinupristin/Dalfopristin 15µg (disc) | 20 | 22 | 22 | 22-24 | n.d. | 22 | 22 | 22 | 26 | n.d. | 24 | 22 |
| Rifampicin 5µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 30 | 24-26 | 26 |
| Teicoplanin 30µg (disc) | 20 | 22 | 22 | 22 | n.d. | 22 | 22 | 20 | 22 | 22-24 | 20 | 22 |
| Tetracycline 30µg (disc) | 36-38 | 36 | 38-40 | 38 | 34 | 38 | 38 | 40 | 40-42 | 42 | 36 | 40 |
| Ticarcillin 75µg (disc) | 42 | 42 | 42 | 44 | 40 | 40 | 40 | 42 | 40 | 44 | 40 | 40 |
| Tigecycline 15µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 32 | 28 | 30-32 |
| Trimethoprim-sulfamethoxazole (1:19) 10µg (disc) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 38 | 38 | 40 |
| Vancomycin 30µg (disc) | 26 | 26 | 26 | 26-28 | 24 | 24 | 24 | 24 | 26 | 30 | 24 | 28 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 123358 | NaCl | positive | growth | 0-10 % |
| 67770 | Observationquinones: MK-7 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | - | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68368 | 16899 ChEBI | D-mannitol | - | fermentation | from API 20E |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | + | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | + | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 123358 | 17632 ChEBI | nitrate | + | reduction | |
| 123358 | 17632 ChEBI | nitrate | - | respiration | |
| 68368 | 17632 ChEBI | nitrate | - | reduction | from API 20E |
| 123358 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | ChEBI | Metabolite | Is resistant | Resistance conc. | |
|---|---|---|---|---|---|
| 140 | 7660 | Nystatin | 100 Unit | from Antibiotic test |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 123358 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 123358 | amylase | + | ||
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 123358 | caseinase | + | 3.4.21.50 | |
| 123358 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 123358 | gelatinase | + | ||
| 123358 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 123358 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 123358 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 123358 | oxidase | + | ||
| 123358 | protease | + | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 123358 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45335 | - | + | - | - | + | + | + | - | - | - | - | + | + | + | - | - | - | - | + | + | - | + | - | - | + | + | + | + | + | - | - | + | + | + | - | - | + | + | - | + | - | - | - | - | - | - | - | + | - | - |
| 123358 | Sample typeCollected before 1952 |
Global distribution of 16S sequence JX861887 (>99% sequence identity) for Bacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM609447v1 assembly for Bacillus spizizenii ATCC 6633 = JCM 2499 | complete | 703612 | 99.2 | ||||
| 66792 | 52087_D01 assembly for Bacillus spizizenii NCTC10400 | contig | 96241 | 74.65 | ||||
| 66792 | ASM17759v1 assembly for Bacillus spizizenii ATCC 6633 = JCM 2499 | contig | 703612 | 72.06 | ||||
| 66792 | ASM515396v1 assembly for Bacillus subtilis NRS 231 | chromosome | 1423 | 62.22 | ||||
| 124043 | ASM3131649v1 assembly for Bacillus spizizenii ATCC 6633 = JCM 2499 | scaffold | 703612 | 48.68 | ||||
| 66792 | ASM131278v1 assembly for Bacillus spizizenii ATCC 6633 = JCM 2499 | contig | 703612 | 14.72 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Bacillus subtilis gene for 16S rRNA, partial sequence, strain: ATCC 6633 | AB018486 | 1507 | 703612 | ||
| 20218 | Bacillus subtilis strain ATCC 6633 16S ribosomal RNA gene, partial sequence | AY616162 | 560 | 703612 | ||
| 20218 | Bacillus subtilis strain CCM 1999 16S ribosomal RNA gene, complete sequence | DQ207730 | 1534 | 1423 | ||
| 20218 | Bacillus subtilis subsp. spizizenii strain ATCC 6633 16S ribosomal RNA gene, partial sequence | GQ911555 | 804 | 703612 | ||
| 20218 | Bacillus subtilis subsp. spizizenii ATCC 6633 16S ribosomal RNA gene, partial sequence | JX861887 | 1424 | 703612 | ||
| 124043 | Bacillus subtilis subsp. spizizenii strain BCRC 10447 16S ribosomal RNA gene, partial sequence. | EF433403 | 1468 | 96241 | ||
| 124043 | Bacillus subtilis subsp. spizizenii ATCC 6633 16S ribosomal RNA gene, partial sequence. | MH173794 | 914 | 703612 |
| 140 | GC-content (mol%)42.9 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 90.88 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 60.39 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 74.89 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 55.79 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 82.09 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.46 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 74.36 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 95.21 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.76 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 89.35 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Antibiotic profiling of wild-type bacilli led to the discovery of new lanthipeptide subtilin-producing Bacillus spizizenii strains whose 16S rDNA sequences differ from the B. spizizenii typing strain. | Helfrich M, Entian KD, Stein T. | Int Microbiol | 10.1007/s10123-022-00266-5 | 2022 | ||
| Guidance on the characterisation of microorganisms in support of the risk assessment of products used in the food chain. | EFSA Scientific Committee, Bennekou SH, Allende A, Bearth A, Casacuberta J, Castle L, Coja T, Crepet A, Halldorsson TI, Hoogenboom R, Jokelainen P, Knutsen HK, Lambre C, Nielsen SS, Turck D, Civera AV, Villa RE, Zorn H, Gomez MA, Bretagne S, Christensen H, Cocconcelli PS, Herman L, Prieto-Maradona M, Mayo B, Pelaez C, Saarela M, Serrano JS, Vernis L, Yurkov A, Aguilera J, Anguita M, Cionci NB, Brozzi R, Correia S, Garcia-Cazorla Y, Istace F, Pettenati E, Revez J, Schoonjans R, Valeri P, Glandorf B. | EFSA J | 10.2903/j.efsa.2025.9705 | 2025 | ||
| In Vivo Behavior of the Antibacterial Peptide Cyclo[RRRWFW], Explored Using a 3-Hydroxychromone-Derived Fluorescent Amino Acid. | Afonin S, Koniev S, Preau L, Takamiya M, Strizhak AV, Babii O, Hrebonkin A, Pivovarenko VG, Dathe M, le Noble F, Rastegar S, Strahle U, Ulrich AS, Komarov IV. | Front Chem | 10.3389/fchem.2021.688446 | 2021 | ||
| Microbial synthesis of enantiopure (S)-2-methylbutanoic acid via L-isoleucine catabolism in Bacillus spizizenii | Zhao Jy, Gao F, Wu M, Li Y, Chen Y, Xiao Z. | World J Microbiol Biotechnol. | 2025 | |||
| Microbial synthesis of enantiopure (S)-2-methylbutanoic acid via L-isoleucine catabolism in Bacillus spizizenii. | Zhao JY, Gao F, Wu M, Li Y, Chen Y, Xiao Z. | World J Microbiol Biotechnol | 10.1007/s11274-025-04324-8 | 2025 | ||
| Quantitative Suspension Test for the Evaluation of a Cold Sterilization System Based on Reducing Free Radicals Compared to Autoclave Sterilization Cycles. | Cirillo C, Botticelli D, Benedicenti S. | J Funct Biomater | 10.3390/jfb16110410 | 2025 | ||
| Design of Peptide-Modified Aluminum Nanoparticles with Enhanced Antimicrobial, Antibiofilm, Antioxidant, and DNA-Cleaving Properties. | Kanlidere Z, Ozturk NF, Yalcin MS, Ozdemir S. | Pharmaceutics | 10.3390/pharmaceutics17111490 | 2025 | ||
| Safety and efficacy of a feed additive consisting of l-cystine produced with Escherichia coliDSM 34232 for all animal species (Wacker Chemie AG). | EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Anguita M, Innocenti ML, Firmino JP. | EFSA J | 10.2903/j.efsa.2025.9688 | 2025 | ||
| Green Synthesis of Antimicrobial Silver Nanoparticles (AgNPs) from the Mucus of the Garden Snail Cornu aspersum. | Todorova M, Petrova V, Ranguelov B, Avdeev G, Velkova L, Atanasova-Vladimirova S, Pisareva E, Tankov C, Tomova A, Dolashki A, Dolashka P. | Molecules | 10.3390/molecules30102150 | 2025 | ||
| Assessment of the feed additive consisting of endo-1,3(4)-beta-glucanase and endo-1,4-beta-xylanase (ROVABIO® ADVANCE) for chickens for fattening and reared for laying, laying hens, turkeys for fattening and reared for breeding, and minor poultry species for fattening and reared for laying for the renewal of its authorisation and for its extension of use to all poultry species (Adisseo France SAS). | EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Mayo B, Yurkov A, Anguita M, Bozzi Cionci N, Brozzi R, Lorenzo Innocenti M, Pettenati E, Tarres-Call J, Galobart J. | EFSA J | 10.2903/j.efsa.2025.9547 | 2025 | ||
| Biotechnology | Supernatant of plant-associated bacteria potency against biofilms formed by foodborne pathogen and food spoilage bacteria. | Gandasurya G, Waturangi DE, Papuangan N, Nurhasanah, Julyantoro PGS. | BMC Res Notes | 10.1186/s13104-024-06997-0 | 2024 | |
| Characterisation of Enterocins Produced by Antilisterial Enterococcus faeciumBH04, BH12, BH84, and BH99 and In Vitro/In Situ Inhibition of Listeria monocytogenes. | Aktas H. | Food Sci Nutr | 10.1002/fsn3.70142 | 2025 | ||
| An Alternative Microbiological Validation for an Online Water Bioburden Analyzer. | Venhuizen OL, Martindale CE, Liew FJ, Cannon J, Samanta A, Scaramozzino MJ. | J AOAC Int | 10.1093/jaoacint/qsae050 | 2024 | ||
| A critical assessment of microbial-based antimicrobial sanitizing of inanimate surfaces in healthcare settings. | Fijan S, Kurti P, Rozman U, Sostar Turk S. | Front Microbiol | 10.3389/fmicb.2024.1412269 | 2024 | ||
| Bioactive Potential of Rheum cordatum Losinsk. Leaf Extracts: Phytochemical Insights from Supercritical CO2, Subcritical Ethanol and Ultrasound-Assisted Extractions | Amangeldinova M, Ersatir M, Kuce Cevik P, Yilmaz M, Cakir O, Kudrina N, Mussayeva A, Kulmanov T, Terletskaya N, Yildirim M. | Plants (Basel) | 2025 | |||
| By-product hazelnut seed skin characteristics and properties in terms of use in food processing and human nutrition. | Kruk M, Ponder A, Horoszewicz J, Poplawski D, Krol K, Leszczynska J, Jaworska D, Trzaskowska M. | Sci Rep | 10.1038/s41598-024-69900-8 | 2024 | ||
| Development of CuO Nanoparticles from the Mucus of Garden Snail Cornu aspersum as New Antimicrobial Agents. | Dolashka P, Marinova K, Petrov P, Petrova V, Ranguelov B, Atanasova-Vladimirova S, Kaynarov D, Stoycheva I, Pisareva E, Tomova A, Kosateva A, Velkova L, Dolashki A. | Pharmaceuticals (Basel) | 10.3390/ph17040506 | 2024 | ||
| Isolation of Actinobacteria from Date Palm Rhizosphere with Enzymatic, Antimicrobial, Antioxidant, and Protein Denaturation Inhibitory Activities. | Smati M, Bramki A, Makhlouf FZ, Djebaili R, Farda B, Abdelhadi FZ, Abdelli N, Kitouni M, Pellegrini M. | Biomolecules | 10.3390/biom15010065 | 2025 | ||
| Design and Synthesis of Thionated Levofloxacin: Insights into a New Generation of Quinolones with Potential Therapeutic and Analytical Applications. | Ibrahim AIM, Abul-Futouh H, Bourghli LMS, Abu-Sini M, Sunoqrot S, Ikhmais B, Jha V, Sarayrah Q, Abulebdah DH, Ismail WH. | Curr Issues Mol Biol | 10.3390/cimb44100316 | 2022 | ||
| Antibacterial and Antifungal Potential of Helichrysum italicum (Roth) G. Don Essential Oil. | Sovljanski O, Acimovic M, Tomic A, Loncar B, Miljkovic A, Cabarkapa I, Pezo L. | Antibiotics (Basel) | 10.3390/antibiotics13080722 | 2024 | ||
| New Antimicrobial Cyclodepsipeptides from a Freshwater Fungus from the Sierra Madre Oriental in Mexico. | Yeverino IR, Bocanegra Sosa TP, Aguilar-Vega L, Garcia-Contreras R, Magana-Gonzalez JL, Figueroa M. | ACS Omega | 10.1021/acsomega.4c10990 | 2025 | ||
| Phylogeny | Therapeutic prospects of endophytic Bacillus species from Berberis lycium against oxidative stress and microbial pathogens. | Nisa S, Shoukat M, Bibi Y, Al Ayoubi S, Shah W, Masood S, Sabir M, Asma Bano S, Qayyum A. | Saudi J Biol Sci | 10.1016/j.sjbs.2021.08.099 | 2022 | |
| Influence of Kombucha Fermentation on Antioxidant and Antimicrobial Activity of Monofloral Rapeseed Bee-Collected Pollen. | Kostic AZ, Sknepnek A, Milincic DD, Gasic U, Kilibarda S, Pesic MB. | Antioxidants (Basel) | 10.3390/antiox14060752 | 2025 | ||
| Development, Characterization, and Biological Evaluation of a Self-Healing Hydrogel Patch Loaded with Ciprofloxacin for Wound Dressings. | Al-Farhan W, Abusara OH, Abu-Sini M, Hikmat S, Tarawneh O, Al-Kouz S, Hamed R. | Polymers (Basel) | 10.3390/polym17192686 | 2025 | ||
| Matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of bacteria isolated from pharmaceutical clean rooms. | Andrade LO, Awasthi R, Dua K, de Jesus Andreoli Pinto T. | Interv Med Appl Sci | 10.1556/1646.9.2017.40 | 2018 | ||
| Green Synthesis of Antibacterial CuO Nanoparticles Based on the Synergy Between Cornu aspersum Snail Mucus and Ascorbic Acid. | Todorova M, Kosateva A, Petrova V, Ranguelov B, Atanasova-Vladimirova S, Avdeev G, Stoycheva I, Pisareva E, Tomova A, Velkova L, Dolashki A, Dolashka P. | Molecules | 10.3390/molecules30020291 | 2025 | ||
| The efficacy of commercial decontamination agents differs between standardised test settings and research laboratory usage for a variety of bacterial species. | Uy B, Read H, van de Pas S, Marnane R, Casu F, Swift S, Wiles S. | PeerJ | 10.7717/peerj.13646 | 2022 | ||
| Deciphering supramolecular arrangements, micellization patterns, and antimicrobial potential of bacterial rhamnolipids under extreme treatments of temperature and electrolyte. | Sikandar S, Jamal A, Mansoor A, Bekhit MM, Ghazanfar S, Ali MI, Urynowicz M, Huang Z. | Front Microbiol | 10.3389/fmicb.2024.1493843 | 2024 | ||
| Garlic and ginger essential oil-based neomycin nano-emulsions as effective and accelerated treatment for skin wounds' healing and inflammation: In-vivo and in-vitro studies. | Ibrar M, Ayub Y, Nazir R, Irshad M, Hussain N, Saleem Y, Ahmad M. | Saudi Pharm J | 10.1016/j.jsps.2022.09.015 | 2022 | ||
| Assessment of the Quality of Injectable Antibiotics in Benin. | Dohou AM, Yemoa AL, Guidan DBA, Ahouandjinou SHS, Amoussa A, Dossou FM, Marini Djang'eing'a R, Dalleur O. | Am J Trop Med Hyg | 10.4269/ajtmh.21-0844 | 2022 | ||
| Novel leaderless bacteriocin geobacillin 6 from thermophilic bacterium Parageobacillus thermoglucosidasius. | Koniuchovaite A, Petkeviciute A, Bernotaite E, Gricajeva A, Gegeckas A, Kalediene L, Kaunietis A. | Front Microbiol | 10.3389/fmicb.2023.1207367 | 2023 | ||
| Escherichia coli from urine samples of pregnant women as an indicator for antimicrobial resistance in the community: a field study from rural Burkina Faso. | Post AS, Guiraud I, Peeters M, Lompo P, Ombelet S, Karama I, Yougbare S, Garba Z, Rouamba E, Tinto H, Jacobs J. | Antimicrob Resist Infect Control | 10.1186/s13756-022-01142-7 | 2022 | ||
| Ramalina capitata (Ach.) Nyl. acetone extract: HPLC analysis, genotoxicity, cholinesterase, antioxidant and antibacterial activity. | Zrnzevic I, Stankovic M, Stankov Jovanovic V, Mitic V, Dordevic A, Zlatanovic I, Stojanovic G. | EXCLI J | 10.17179/excli2017-301 | 2017 | ||
| Antioxidant, Antimicrobial Activity and Toxicity Test of Pilea microphylla. | Modarresi Chahardehi A, Ibrahim D, Fariza Sulaiman S. | Int J Microbiol | 10.1155/2010/826830 | 2010 | ||
| Antimicrobial Activity and Degradation Ability Study on Nanoparticle-Enriched Formulations Specially Designed for the Neutralization of Real and Simulated Biological and Chemical Warfare Agents. | Ginghina RE, Toader G, Purica M, Bratu AE, Lazaroaie C, Tiganescu TV, Oncioiu RE, Iorga GO, Zorila FL, Constantin M, Craciun G, Comanescu F, Romanitan C. | Pharmaceuticals (Basel) | 10.3390/ph15010097 | 2022 | ||
| Development and Comparative Evaluation of Ciprofloxacin Nanoemulsion-Loaded Bigels Prepared Using Different Ratios of Oleogel to Hydrogels. | Hamed R, Abu Alata W, Abu-Sini M, Abulebdah DH, Hammad AM, Aburayya R. | Gels | 10.3390/gels9070592 | 2023 | ||
| A Comprehensive Analysis of the UVC LEDs' Applications and Decontamination Capability. | Nicolau T, Gomes Filho N, Padrao J, Zille A. | Materials (Basel) | 10.3390/ma15082854 | 2022 | ||
| Phylogeny | Identification of spore-forming bacteria isolated from contaminated Lowenstein Jensen media and effectiveness of Vancomycin to reduce Mycobacterial culture contamination in Burkina-Faso. | Kabore A, Tranchot-Diallo J, Hien H, Zoure O, Zingue D, Sanou A, Gomgnimbou MK, Daneau G, Ouedraogo GA, Meda N, Sangare L. | Sci Rep | 10.1038/s41598-019-43662-0 | 2019 | |
| Enzymology | Chemical composition and antibacterial activity of essential oil from fruit of Micromelum integerrimum (Buch.-Ham. ex DC.) Wight & Arn. ex M. Roem. | Kotoky R, Bordoloi M, Yadav A, Tamuli KJ, Saikia S, Dutta PP, Khound PP, Saikia SP | Nat Prod Res | 10.1080/14786419.2018.1483923 | 2018 |
| #140 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 347 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41811 | ; Curators of the CIP; |
| #45335 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 10779 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123358 | Collection of Institut Pasteur ; Curators of the CIP; CIP 52.62 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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