Pelotomaculum terephthalicicum (DSM 16121, JCM 11824, NBRC 100523)

Name: Pelotomaculum terephthalicicum (DSM 16121, JCM 11824, NBRC 100523)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11838

Type strain

Strain Designation JT

Culture col. no. DSM 16121 JCM 11824 NBRC 100523 JT

NCBI tax ID(s) 947009 206393

Special Collections DSMZ JCM

History <- Y.-L. Qiu, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki, Japan; JT <- Y.-L. Qiu; {2002} Y. Qiu strain JT.

Links

Pelotomaculum terephthalicicum JT is an anaerobe bacterium that was isolated from anaerobic mesophilic granular sludge.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 297293

DSM 16121,JCM 11824,NBRC 100523

@ref 20215

Last LPSN update 2026-02-09 11:20:40

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Peptococcaceae

Genus Pelotomaculum

Species Pelotomaculum terephthalicicum

Full scientific name Pelotomaculum terephthalicicum corrig. Qiu et al. 2006

Synonyms (1)

Pelotomaculum terephthalicum

Morphology

Colony morphology

6304

Incubation period8-14 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6304	PELOTOMACULUM MEDIUM (DSMZ Medium 960)		Medium recipe at MediaDive	Name: PELOTOMACULUM MEDIUM (DSMZ Medium 960; with strain-specific modifications) Composition: None 1.49701 g/l Na2CO3 1.49701 g/l NH4Cl 0.538922 g/l Na2S x 9 H2O 0.299401 g/l L-Cysteine HCl x H2O 0.299401 g/l MgCl2 x 6 H2O 0.199601 g/l KH2PO4 0.139721 g/l Yeast extract 0.0998004 g/l Nitrilotriacetic acid 0.0127745 g/l NaCl 0.000998004 g/l FeCl2 x 4 H2O 0.000998004 g/l Sodium resazurin 0.000499002 g/l CaCl2 x 2 H2O 9.98004e-05 g/l MnCl2 x 4 H2O 9.98004e-05 g/l ZnCl2 9.98004e-05 g/l Pyridoxine hydrochloride 9.98004e-05 g/l NiCl2 x 6 H2O 9.98004e-05 g/l Riboflavin 4.99002e-05 g/l Calcium D-(+)-pantothenate 4.99002e-05 g/l Thiamine HCl 4.99002e-05 g/l p-Aminobenzoic acid 4.99002e-05 g/l Nicotinic acid 4.99002e-05 g/l (DL)-alpha-Lipoic acid 4.99002e-05 g/l Na2WO4 x 2 H2O 3.99202e-05 g/l Na2SeO3 x 5 H2O 2.99401e-05 g/l Na2MoO4 x 2 H2O 2.99401e-05 g/l CoCl2 x 6 H2O 2.99401e-05 g/l Folic acid 1.99601e-05 g/l Biotin 1.99601e-05 g/l CuCl2 1.99601e-05 g/l H3BO3 9.98004e-06 g/l Vitamin B12 9.98004e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
6304	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

6304

Oxygen toleranceanaerobe

Observation

67770

Observationquinones: MK-9(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6304	anaerobic mesophilic granular sludge	Niigata, Nagaoka	Japan	JPN	Asia
67770	Anaerobic sludge treating wastewater from the manufacturing of terephthalic acid

Taxonmaps

69479

Global distribution of 16S sequence AB091323 (>99% sequence identity) for Pelotomaculum terephthalicicum subclade from Microbeatlas

Aquatic Samples	116
Soil Samples	8
Animal Samples	132
Plant Samples	16
Total Samples	272

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6304	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2241053v1 assembly for Pelotomaculum terephthalicicum JT	contig	GCA_022410535	947009.3	947009	56.97

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6304	Pelotomaculum terephthalicicum gene for 16S rRNA, partial sequence	AB091323	1483		947009

GC content

@ref	GC-content (mol%)	Method
67770	53.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pelotomaculum terephthalicicum JT JT
NCBI: GCA_022410535.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	57.13	no
125438	anaerobic	anaerobicⓘ	yes	88.18	yes
125438	aerobic	aerobicⓘ	no	88.53	yes
125438	spore-forming	spore-formingⓘ	yes	74.86	no
125438	thermophilic	thermophileⓘ	no	64.59	yes
125438	flagellated	motile2+ⓘ	yes	69.07	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pelotomaculum terephthalicum sp. nov. and Pelotomaculum isophthalicum sp. nov.: two anaerobic bacteria that degrade phthalate isomers in syntrophic association with hydrogenotrophic methanogens.	Qiu YL, Sekiguchi Y, Hanada S, Imachi H, Tseng IC, Cheng SS, Ohashi A, Harada H, Kamagata Y	Arch Microbiol	10.1007/s00203-005-0081-5	2006

References

#6304	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16121
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pelotomaculum terephthalicicum (DSM 16121, JCM 11824, NBRC 100523)

Name and taxonomic classification

Morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_022410535

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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