Name: Pelotomaculum thermopropionicum SI
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11833

Type strain:

Species: Pelotomaculum thermopropionicum

Strain Designation: SI

Variant: Co-culture with BacDive ID 11834

Culture col. no.: DSM 13744, JCM 10971

Strain history: H. Imachi SI.

NCBI tax ID(s): 110500 (species)

SI-ID 100857

DSM 13744, JCM 10971, DSM 13752

Other strains from Pelotomaculum thermopropionicum

P. thermopropionicum SI, DSM 13752, JCM 10971

Section

Pelotomaculum thermopropionicum SI is an anaerobe, thermophilic bacterium that was isolated from granular sludge in a thermophilic upflow anaerobic sludge blanket reactor.

anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptococcaceae*
	Genus	*Pelotomaculum*
	Species	**Pelotomaculum thermopropionicum**
	Full Scientific Name (LPSN)	Pelotomaculum thermopropionicum Imachi et al. 2002

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5142]

Culture medium

PELOTOMACULUM MEDIUM (DSMZ Medium 960)

[Ref.: #5142]

Culture medium growth

[Ref.: #5142]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5142]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5142]			growth	55 °C
[Ref.: #67770]			growth	55 °C

[Ref.: #5142]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5142]

Oxygen tolerance

anaerobe

[Ref.: #67770]

Observation

quinones: MK-7, MK-7(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5142]	Sample type/isolated from	granular sludge in a thermophilic upflow anaerobic sludge blanket reactor
[Ref.: #5142]	Country	Japan
[Ref.: #5142]	Country ISO 3 Code	JPN
[Ref.: #5142]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Methanogenic granular sludge in a thermophilic upflow anaerobic sludge blanket reactor
* marker position based on {}

Isolation sources categories

#Engineered	#Bioreactor	-
#Engineered	#Waste	#Activated sludge
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5142]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5142]	Pelotomaculum thermopropionicum SI gene for 16S rRNA	AB035723	1532	ENA	370438 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pelotomaculum thermopropionicum SI	GCA_000010565	complete	GenBank	370438 tax ID	*
[Ref.: #66792]	Pelotomaculum thermopropionicum SI	370438.4	complete	PATRIC	370438 tax ID	*
[Ref.: #66792]	Pelotomaculum thermopropionicum SI	640427128	complete	JGI IMG/M	370438 tax ID	*

[Ref.: #5142]	GC-content	52.8 mol%
[Ref.: #67770]	GC-content	52.8 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pelotomaculum thermopropionicum SI SI NCBI: GCA_000010565.1
[Ref.: #69480]	motile	yes	77.701	no
[Ref.: #69480]	flagellated	no	92.981	no
[Ref.: #69480]	gram-positive	no	90.824	no
[Ref.: #69480]	anaerobic	yes	99.709	yes
[Ref.: #69480]	halophile	no	96.291	no
[Ref.: #69480]	spore-forming	yes	90.049	no
[Ref.: #69480]	thermophile	yes	99.998	yes
[Ref.: #69480]	glucose-util	yes	76.89	no
[Ref.: #69480]	aerobic	no	98.122	yes
[Ref.: #69480]	glucose-ferment	no	79.182	no

Availability in culture collections External links

[Ref.: #5142]

Culture collection no.

DSM 13744, JCM 10971

[Ref.: #81052]

SI-ID 100857

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	In vitro synthesis of polyhydroxyalkanoates using thermostable acetyl-CoA synthetase, CoA transferase, and PHA synthase from thermotorelant bacteria.	Tajima K, Han X, Hashimoto Y, Satoh Y, Satoh T, Taguchi S	J Biosci Bioeng	10.1016/j.jbiosc.2016.06.001	2016	*
Phylogeny	Pelotomaculum thermopropionicum gen. nov., sp. nov., an anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium.	Imachi H, Sekiguchi Y, Kamagata Y, Hanada S, Ohashi A, Harada H	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1729	2002	*

References

#5142

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13744

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#81052

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100857.1 )

* These data were automatically processed and therefore are not curated

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Pelotomaculum thermopropionicum SI SI

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